| mature miRNA: ACGGATGATTAAAGTTGGACACGG species: Oryza sativa database: miRNEST The numbers on the right side of the alignments show a score calculated for them. When calculating the score, a mismatch is given a score of 1, bulge: 2, and wobble: 0.5. |
| Predicted miRNA targets | |||||||||
gi|88417823|gb|CI535982.1|CI535982 CI535982 Oryza sativa (japonica cultivar-group) after pollination embryo Oryza sativa Japonic ACGGATGATTAAAGTTGGACACGG EST sequence (targeted fragment marked with yellow): CGGTTCAATTTCCAGCAAGTCATATTAATTGATCATAACAATATACAAACAGCAAAAGGAAAAAAAAAGAAAAAACTTTGATAATAAAGCACATCGAACAAGGGGCCATGGAAACTTACCCATAATTACTAAATATTTACTTCTATCTCCGTCCTAAAATATACTCCCTCAATCCCAAAATAAGCGTAGCCATGAGTTTTCGTGTCCAACTTTAATCGTCCGTCTTATTTAATTTTTTTTAACAAAACAAAAAAAAAGTCTCGCATAAAGTACTACTCCCTCTATCCCATAATATAAGGCGCGGTTAAACTTGTCACGGTCTCCAAAACTAATCTTTAGCTTATAATTTCTCATATATTATAAGGTTTGTAGCAACAAAATTATAACCATATGAAAGTAAATTT | |||||||||
gi|117212695|gb|CT863691.1|CT863691 CT863691 Oryza sativa (indica cultivar-group) cv. Guang Lu Ai 4 Oryza sativa Indica Group cD ACGGATGATTAAAGTTGGACACGG EST sequence (targeted fragment marked with yellow): TGCTCTATATTTTCTCCTTCTCTCTGTAGGTCGAATTGTATTTGAGAGAGATAGAGAGATGGAGAGGGAGAGAGGAAGGAGAACGATGGAGGAGGCATGGATCGATCGCCTGCCGCAGGATCTCCTCCAGAGAGTGATCCCCCTCGAGACGCCGCGGGACGCATGCCGCGCCGCCGCCGTCTCCCAGGCGTTCCGCGCCGTCGCCGACTCCGACGTCGTCTGGGGCAAGTTCCAGCCAGACGATTCGTCCCTGCAGCTCGCCGACGGTGAGCTCTTTCCGCCGCCGCGTTCCAAGAAGGAGCGCTTCCTCCGCCTCTCCGCCGGCCTACTCCTCCTTCCAGATAGGCGCAGGGTGCATACTTATTTGCTTCATCGATCTCTTCTCGTCTTCAAAACTGCAGCTATCTCTTTCGATTCACTCCTGTGTTGTGGCGCAGGGCATGTGGCTAGATAGGGGGACCGGGGCCAGGTGCTATATGCTCTCGGCCAGAGCGCTGGTGATTATATGGGGCGATACACCGCGCTACTGGCGCTGGATCCCTCTCGCCGACTCCTCAAGGTATGTTGTTCCTTCCCTAGGATCATACTCCCTTTATCCCATTTTAAACACATCCCGTGTCCAATTTTAATCGTCCGTATTGTTTAAATTTGTTAATTATTTTAAAAATATAAGTCACGCATAAAGTATTTTATCATCTAATAACCATAACAATATTTCAAATAAAACGAGCGATCAAAGTTGTACAAGAAAACTCAAGGCTACGCTTAAAATGGGACAGAGGTAGTACTATACACATGAAATAGATTTCTGTCCCTTGAGGGGACATCCCTCATTTGTGCATGTTGTTCAAAAGTTATCAGAAAATTTTAACAATTGTCAATATAAATCAATATATGATATATCCTTTCACAACATACAAATTAAAATTCGACTTATACAATTCAAATAAAAAATATAAATTTAACCGGGAAATTTCCCCGTCTATTCATAGCCCAAATTATAATTTTTTGTTTCTACTTGTTTTTGTTGGAATTTGAAATTTCCTGTTTTAGAAAGGGCCATTTCACCTTTTAAATTTTTTTCCCAAATTTTTTTTTTTTTTTTTTAACTTTTT | |||||||||