| mature miRNA: AGCTCGTCATAGATGACCTC species: Oryza sativa database: miRNEST The numbers on the right side of the alignments show a score calculated for them. When calculating the score, a mismatch is given a score of 1, bulge: 2, and wobble: 0.5. |
| Predicted miRNA targets | |||||||||
gi|58655819|gb|CK044499.1|CK044499 44948rsiceh_14247.y1 Oryza sativa cv. PA64s panicle ferile cDNA library Oryza sativa Indica G AGCTCGTCATAGATGACCTC EST sequence (targeted fragment marked with yellow): TATAATTGTTGGCTTAAGATGTTGAACTCTAGCTCTGGAGAAGTCATCTATGATGAGCAAAGCCATCGGCACTAGATGATTTTTCTGTGTAAATTCTGTGTAGTATGCATTTAATGTCTCCTCTTTCCCACCAAGGCAGTTTTCCCCATTTGTTATCTATTATGAAATTGTATTACATTGGGCTGCTACTTTGATTGTTTGTTAAGGGTTGCCATGCAACATATAGATTAATGAGTTGAGTCCATGATCCTGGAGATGCCCAATTCTCTATTATTGTAAACTGTGATGTTCTTGTTCTTTCTGGAATTTCTTTGGGGCAAGGAACTTAACAGTGAAATAGAGGCTTGCATCAAAAGAACCAAAAAGAGTAAAAGAGGGTAATTTCTACCAGTTCTATTGATGACTTTGTGGCTTAGCTTTGGTTCGTTTTCTGTTTTATATGAAAACAGTATATTCTTCACTATGGTCCTCTCT | |||||||||
gi|87004600|gb|CI300922.1|CI300922 CI300922 Oryza sativa (japonica cultivar-group) etiolated shoot Oryza sativa Japonica Group c AGCTCGTCATAGATGACCTC EST sequence (targeted fragment marked with yellow): GATGTTGAACTCTAGCTCTGAAGAAGTCATCTATGATGAGCAAAGCCATCGGCACTAGATGATTTTTCTGTGTAAATTCTGTGTAGTATGCATTTAATGTCTCCTCTTTCCCACCAAGGCAGTTTTCCCCATTTGTTATCTATTATGAAATTGTATTACATTTTGCTGCTACTTTGATTGTTTGTTAAGGTAGGGCGAAAGAGGATACATGAGGAGGTATTAGTCCAAATTGAGAAAGAAAAGGAGGCAGCCCTGGTTGAAGCTCAGCACAAAGCGGAACGCGAAAGGAAAGAGCGGGAGGAGCTAGAGAAAAAGCTCGAGGAAGAGCGGAAGAAAGCCGAGGAGGCTCAGATGAAGGAAGCAATGGAGCAGCAGCAGAAAG | |||||||||
gi|29665154|gb|CB661429.1|CB661429 OSJNEd04E09.f OSJNEd Oryza sativa Japonica Group cDNA clone OSJNEd04E09 5', mRNA sequence AGCTCGTCATAGATGACCTC EST sequence (targeted fragment marked with yellow): CTTGAGGTCAGCTCTATTGGCAATCTGTGCTCTAAATACATTATTTAAGTTCTTTTATGAAGAATAATGTTTTTTTTAAATGACCTTCTTGATTATTTAATCTGCAAAACTTTTCTTTAATGAAACGACTGCACGTCTTGCTTCCAAATTGTTATGGTCTCTTGTTATCCTTGCATATAATTGTTGGCTTAAGATGTTGAACTCTAGCTCTGAAGAAGTCATCTATGATGAGCAAAGCCATCGGCACTAGATGATTTTTCTGTGTAAATTCTGTGTAGTATGCATTTAATGTCTCCTCTTTCCCACCAAGGCAGTTTTCCCCATTTGTTATCTATTATGAAATTGTATTACATTTTGCTGCTACTTTGATTGTTTGTTAAGGGTTGCCATGCAACATATAGATTAATGAGTTGAGTCCATGATCCTGGAGATGCCCAATTCTCTATTATTGTAAACTGTGATGTTCTTGTTCTTTCTGGAATTTCTTTGGGGCAAGGAACTTAACAGTGAAATAGAGGCTTGCATCAAAAGAACCAAAAAGAGTAAAAGAGGGTAATTTCTACCAGTTCTATTGATGACTTTGTGGCTTAGCTTTGGTTCGTTTTCTGTTTTATATGAAAACAGTATATTCTTCACTATGGACCTCTCTGCTGGTTGGCAAATCTGAATCCGTTTGTTCAATCCATTAGGTTGCATTCTTAAAAGGCATGGAGTTAAATTTCCATGGTGGTTTTTCAAAGTTTACTTTGGTTGATGCTTTCATAGACGTAGTATGGTCCAATGTGGGGCTGTAATTTGTCATCATTCCAGTTATGTCATCACATGTGGCATGTGATATACCTGTCATAAAAATGCGTTTAATATTGCCATGCTTTCACCCAGTGTAACGATACACTATTGCATAATT | |||||||||
gi|29667246|gb|CB663521.1|CB663521 OSJNEd08J14.f OSJNEd Oryza sativa Japonica Group cDNA clone OSJNEd08J14 5', mRNA sequence AGCTCGTCATAGATGACCTC EST sequence (targeted fragment marked with yellow): CTTTAATGAAACGACTGCACGACTATGCTTCCAAATTGGTATGGTCTCTTGTTATCCTTGCATATAATTGTTGGCTTAAGATGTTGAACTCTAGCTCTGAAGAAGTCATCTATGATGAGCAAAGCCATCGGGACTAGATGATTTTTCTGTGTAAATTCTGTGTAGTATGCATTTAATGTCTCCTCTTTCCCACCAAGGCAGATTTCCCCATTTGTTATCTATTATGAAATTGTATAACATTTTGCTGCTACTTTGATTGTTTGTTAAGGGTGTGCCATGCAACATATAGATTAATGAGTTGAGACCATGATCCTGGAGATGCCCAATTCTCTATTATTGTAAACTGTGATGTTCTTGTTCTTTCTGGAATTGCTTTGGGGGAAGGAACTTAACAGTGAAATAGAGGCTTGCATCGAAAGAACCAAAAAGAGTAAGAGAGGGTAATTGCTA | |||||||||
gi|88733118|gb|CI756295.1|CI756295 CI756295 Oryza sativa (japonica cultivar-group) root of seedling 2ppm NAA(naphthalene acetic AGCTCGTCATAGATGACCTC EST sequence (targeted fragment marked with yellow): GGGGCTTTATTACTTGGTCATTCGACTCCTTCGTCTTCCTGCGCCCCTCTTCTCCGGGTCTAGGGTTTGCTGCTCCCCCTCCCCGCCGCCGCCGCCTCCGCCTCCGCCGCTCAGATGGGAGGCAAGTGCCCGCACCGCAAGGTCAAGAAGCGCCGCCTCTCGCACAAGACGGGCCGCCGAGGCAAGTTCCTCGTCAAGGCCGACGACGCCGTCTACGACGAGCTGGTCAAGCTCGCCGACGCCGGCCAGGACGCCGACGCTACCCAGCTCCCCGTCGACGAGGACCTCCCCGNGTATGGGACAGTTCTACTGCCTCCACTGCGATCGCTACTTTGCAAGTGAGAGTGTCAACGAGGA | |||||||||
gi|29668929|gb|CB665204.1|CB665204 OSJNEd11G22.f OSJNEd Oryza sativa Japonica Group cDNA clone OSJNEd11G22 5', mRNA sequence AGCTCGTCATAGATGACCTC EST sequence (targeted fragment marked with yellow): CTGTAAGAGCATAACTGATGAAGATATCCGTACAGCCATACAGAATTCTGACGGTCCAAAGGGTCCTATGTTTCTGCCAGAGTTGCCGTTTGAGATTCTTGTGCGAAGGCAAATAAGTCGTTTGCTTGATCCAAGCCTTCAATGCGCAAATTTTATCTATGACGAGCTAGTCAAGATTAGCCGTGGTTGCTTAACCAGCGAGCTGCAGAAATACCCGATTCTTAAAAAGCGGATGGGTGAAGCAGTTAGCAATTTCTTGAGAGATGGTCTTCGACCTGCAGAGACAATGATAACCCATATTATTGAGATGGAGATGGATTACATAAATACTTCACATCCAAACTTTGTTGGAGGCAACAAGGTTGTTGAGCTTGCTAGGCAAGAAATTTTACCTCCCAAAGCACCAACCTCTGTAACGATTCCTAAGGATGGTACTGCTATTAGTCCTGAGATACAATTAACATCTGACAGAAGTCAAAAGTCACGTGCTATTTTTGCAAGAGATGCTACTAGAGGAGCCACCTCTGATCAGGGAGTGCAGCCTGATGCTGATACAGGAACAAGTGTGGCAGGCAGAAATCAGAGGGGTCACTCACTGGTTGCTGGGAGTTCATCAAGCAAGTCAGTTGCACGAGTTCACAGCCTAGATAACCTTATCTCTATCATCCAGTTAAGAGAGCCACCCATCACTTTGAAGCCATCAGAAAACCAGCCTGCACAGGATGCAACAGAGGTAGCCATTGTGAAACTATTGATCAAATCGTACTATGACATTGTCAGAAAGAGTATTGAAGATGCTGTTCCAAAGGCTATAATGCATTTTCTGGTGAACCCACACAAGCGTGAGCTGCATAATG | |||||||||
gi|44671083|gb|CR284517.1|CR284517 CR284517 Oryza sativa library (Han B) Oryza sativa cDNA clone y742b06p5, mRNA sequence AGCTCGTCATAGATGACCTC EST sequence (targeted fragment marked with yellow): TGCCTGTATTAGGAATCGGCATTATGGNCGCGGGACAACGGCAGCCGTATGCGCAAGCTGCCAACATTGAAGTGCCAATGGTGGCACGGCTGATGCGGTACTATGCTGGTTGGGCTGACAAGATCCATGGGCTTGTCGTGCCGGCTGACGGCCCACACCATGTACAGGTGCTGCACGAGCCCATTGGTGTCGCAGGTCAGATCATCCCATGGAACTTTCCGCTTCTGATGTTTGCGTGGAAAGTTGGCCCTGCTTTGGCTTGTGGAAACACTGTTGTGCTCAAGACGGCTGAGCAAACTCCTCTGTCTGCTCTATTTGCTTCTAAGCTGTTGCATGAGGCTGGACTCCCAGATGGTGTTGTTAACGTGGTATCTGGTTTTGGACCTACTGCTGGTGCTGCTCTTGCTAGTCACATGGATGTCGATAAGATTGCATTCACTGGATCGACCGATACTGGAAAAGTCGTCCTTGAGTTGGCTGCAAGGAGCAACCTTAAGTCAGTGACACTGGAGCTAGGAGGCAAGTCTCCTTTCATCATCATGGATGATGCTGATGTTGACCATGCTGTTGAGCTTGCGCATTTTGCACTGTTCTTTAACCAGGGACAATGTTGCTGTGCTGGGTCTCGTACCTTTGTGCATGAGCGTATCTATGATGAGTTCGTGGAGAAGGCCCAGCTCGTGCTCTCAACCTGTGGGTGGGAACCCATCACAAGGCTTTGACCACGGCCCCCATGATACCGGCATCTACCCATCTGTGCTCACCACTATGTGGTCAACAGGGCACCTCTTATACGGTGGATCTCACACATACTTACCCCACCACCTATGTTCTCCACCTCATCTCCACAACAC | |||||||||
gi|88314829|gb|CI608288.1|CI608288 CI608288 Oryza sativa (japonica cultivar-group) callus Oryza sativa Japonica Group cDNA clone AGCTCGTCATAGATGACCTC EST sequence (targeted fragment marked with yellow): GGGCACTCTCCCGATCCTTCCCCAACTCGGCGTCGCGCCGCCTCAACCGAAGCAAGGAGCAAAGCGGGGATTCAGAACGGGAAGGAGAAGGTCCGGTTCGTCCGCTCTCGAGCTCAAGTGTCAGTTGAAGTGTTTTGAAAGTCATGGCGGAGCATTTGGCTTCAATATTTGGGACTGAGAAGGATAGGGTTAACTGCCCCTTTTACTTCAAGATTGGGGCTTGCCGTCATGGGGATCGTTGCTCCCGTCTGCACAACAGGCCAACTGTGTCGCCGACAATTGTGCTTGCTAACATGTATCAGCGCCCTGATATGATCACACCAGGAGTCGATGCTCAAGGCCAACCTATTGATCCTGAAAAGATGCAGGAGCACTTTGAGGATTTCTATGAGGATATCTATGAGGAGCTGAGCAAGTT | |||||||||
gi|88995969|gb|CI037260.1|CI037260 CI037260 Oryza sativa (japonica cultivar-group) etiolated shoot Oryza sativa Japonica Group c AGCTCGTCATAGATGACCTC EST sequence (targeted fragment marked with yellow): ATGGCAAAACAACGAGTAGTTCAACACAATTCACCACTGACAATCATGGGGAAAAAAAAAGGAACAATCCTCCTACTAAAGTAGTACAAACAAAGGAGAAATTGGAAGTTTCAACAGTGTGAAACAAACCAAAACAACACGACGCACCCTGTTACTTGCCTACTTGGGCGGGGTGGGCGGTGCGAACTGCTGCGGCGGCGCGGGCGGTGCAAACTGCTGCGGCGATGCGGCCTCCGCGCGGCCACGGTTCCGGCCGAGCAGGTAGCACCCCAGCGCGATGACGAGAACCAGGAGGATCGCCGGGATCGATATCACGAGCTCAAACATGGATGCTGAACAATGAATAGCCCCCCGCGCCTCCTCTTCACCTCGATCCAACCCTGCGCTTCCGCGACCGCGCGGTGCTAGACGAAACCGGAAGGCGCCGACGAACCTGGAGAAGACGGGCGCGCGAGGCCCTCTATGGCGAGCGGTGCAACTTCCCAGCGGCAGCGATGCGGTTCCCCGTCGCGAATGGCAAGGGACGTCGC | |||||||||
gi|88361273|gb|CI626377.1|CI626377 CI626377 Oryza sativa (japonica cultivar-group) seed Oryza sativa Japonica Group cDNA clone J AGCTCGTCATAGATGACCTC EST sequence (targeted fragment marked with yellow): TCACTCTCCCGATCCTTCCCCAACTCGGCGTCGCGCCGCCTCAACCGAAGCAAGGAGCAAAGCGGGGATTCAGAACGGGAAGGAGAAGGTCCGGTTCGTCCGCTCTCGAGCTCAAGTGTCAGTTGAAGTGTTTTGAAAGTCATGGCGGAGCATTTGGCTTCAATATTTGGGACTGAGAAGGATAGGGTTAACTGCCCCTTTTACTTCAAGATTGGGGCTTGCCGTCATGGGGATCGTTGCTCCCGTCTGCACAACAGGCCAACTGTGTCGCCGACAATTGTGCTTGCTAACATGTATCAGCGCCCTGATATGATCACACCAGGAGTCGATGCTCAAGGCCAACCTATTGATCCTGAAAAGATGCAGGAGCACTTTGAGGATTTCTATGAGGATATCTATGAGGAGCTGAGCAAGTTTGGTGAGGTTGAGACCCTCAATGTCTGTGATAACCTTGCTGACCACATGATAGGCAATGTGTATGTCA | |||||||||
gi|88960706|gb|CI382387.1|CI382387 CI382387 Oryza sativa (japonica cultivar-group) callus Oryza sativa Japonica Group cDNA clone AGCTCGTCATAGATGACCTC EST sequence (targeted fragment marked with yellow): AAAATTAGCATGCCATATATATATACACACAAAAAAAGGCTGGTTCTGATGTAAGACCCCCTAACATTCCATTCCAGCGACGGGCGAAAATTATCTAAATTAAAAAAGCTTAATTAACCTTTTTGGTCCAATGGATTCAGAGCCACTTCAACCAGACTATGGGCATCACCCATGGGTGAGGAACCTCGGGTGCCTAACTTAATGGTGCCTAAGGCTTTGTCATCAGCCTATAGCTGATAGGACTATGTCAGTCTTGTTACGACAAACTTCACCAGTCTAGCTCCACAAAAGGATCATGACCTGCCCTCATATTCCGAATAGATATTGGAGATCATCTATGGTGAGCCGAGTTGCACTGCCGCCCGGTTTGTCCTCAGCAAAAGCAGATTGGACCATCTTTCTCTTCTTCTCCTGTACAGCTAAAATCGATCTTCCAATGTGTCTTTGATAGTTAAGGGGGAAACGGTGACGGCAG | |||||||||
gi|88380439|gb|CI518809.1|CI518809 CI518809 Oryza sativa (japonica cultivar-group) 1 day after pollination pistil Oryza sativa J AGCTCGTCATAGATGACCTC EST sequence (targeted fragment marked with yellow): GAGAACCAACATTAAAATTAGCATGCCATATATATATACACACAAAAAAAGGCTGCTTCTGATGTAAGACCTCCTAACATCCCATTCCAGCGACGGCGAACATAATCTAATTACAAAAGCTAACTAACCCTCTCTGTCCAATGATCAGAGCAATTCAAAAGACATGGCATCACCCATGGTGAGGAACATCGGGTGCATAAATTAATGGTGCTAAGGCTTTGTCATCAGCTATAGCTGATAGGACTATGTCAGTCTTGCTACGACAAAATTCACCAGCTAGCTCCACAAAAGGATCATGAGCTGCCCTCATATTCCGAATAGATATTGGAGATCATCTATGGTGAGCCGAGTTGCACTGCCGCCAGGTTTGTCCTCACCAAAAGCAGATTG | |||||||||
gi|88286729|gb|CI517840.1|CI517840 CI517840 Oryza sativa (japonica cultivar-group) 5 days after pollination pistil Oryza sativa AGCTCGTCATAGATGACCTC EST sequence (targeted fragment marked with yellow): GGAGTAACAGTTTGTACTTTGTAATGCATTCCATCAGAGAACCAACATTAAAATTACCATGCCATATATATATACACACAAAAAAAGGCTGCTTCTGATGTAAGACCTCCTAACATCCCATTCCAGCGACGGCGAACATAATCTAATTACAAAAGCTAACTAACCCTCTCTGTCCAATGATCAGAGCAATTCAAAAGACATGGCATCACCCATGGTGAGGAACATCGGGTGCATAAATTAATGGTGCTAAGGCTTTGTCATCAGCTATAGCTGATAGGACTATGTCAGTCTTGCTANGACAAAATTCACCAGCTAGCTCCACAAAAGGATCATGAGCTGCCCTCATATTCCGAATAGATATTGGAGATCATCTATGGTGAGCCGAGTTGCACTGCCGC | |||||||||
gi|89161744|gb|CI100904.1|CI100904 CI100904 Oryza sativa (japonica cultivar-group) Panicles one day after flowering Oryza sativa AGCTCGTCATAGATGACCTC EST sequence (targeted fragment marked with yellow): TTTTGGCAAAACTCGCTCCATGTCATGGCTTCATTGGGGCGCAACACTGAGTGAAAAGAATAGTAGTAGAACTAGAAAAGCATACATCTATCTGGTGCAAACAAACTGAATGCAGAATGCGTGCAACCACGGTACATCGCCTGGTTCAACCACTGGTTCGTTCGGGTGACGGTCGTGAATGGCGAGATCAAAATCCGTTACCGCTTGCATCGGGATTGAATGGCAGCTGCTCCCCTGAGTGGCTAGATTTCCTTGACCTTGGTTGCTTTGGGGTCGAATATGGCGAGCTTCCATCTTGGAAGGATGAAGAAAGCCCATGAGCCCTTGGTAGACCTGTTGCATCGGCATCCACCGCAATAGCCTCTCTCAACTGTGTCCGCTTCAAGTGGTATCTCATCCAAAGTC | |||||||||
gi|86482367|gb|CI125000.1|CI125000 CI125000 Oryza sativa (japonica cultivar-group) supermix Oryza sativa Japonica Group cDNA clo AGCTCGTCATAGATGACCTC EST sequence (targeted fragment marked with yellow): TTTTTTTGCGTATCCTTACAACCAACCTTGTCAGATTTTGCAAGGCAAAACCGTCTTTTAGGATACAGGCATTCGGACGCTCGATACTAACACCGAGCAACCATAGACTCTTCCCTGGGCTTAAACTAAAACTATACCCATCACTGATATATCATTTTATGATGAAACGATTGGGCAGCGAAATATACTGTACAAAGGGGGCAAACGGGCAAAACTCGCTCCATGTCATGGCTTCATTGGGGCGCAACACTGAGTGAAAAGAATAGTAGTAGAACTAGAAAAGCATACATCTATCTGGTGCAAACAAACTGAATGCAGAATGCGTGCAACCACGGTACATCGCCTGGTTCAACCACTGGTTCGTTCGGGTGACGGTCGTGAATGGCGAGATCAAAATCCGTTACCGCTTGCATCGGGATTGAATGGCAGCTGCTCCCCTGAGTGGCTAGATTTCCTTGACCTTGGTTGCTTAGGGGTCGAATATGGCGAGCTTCCATCTTGGAAGGATGAAGAAAGCCCATGAGCCCTTGGTAGACCTGTTGCATCGGCATCCAGGCAATAGCCTCTCTCAACTGTGTCCGCTTCAAGTGGTATCTCATC | |||||||||
gi|88244130|gb|CI243252.1|CI243252 CI243252 Oryza sativa (japonica cultivar-group) Shoot and root of germinating seeds Oryza sat AGCTCGTCATAGATGACCTC EST sequence (targeted fragment marked with yellow): TTTTTTTTTTTTTTTTCATAATAAATCTCCCAAACCACTACAAACCAAATACCACAACTCCACATGCATATATGCATGACACAGCAAAATATATGTTACACAAATATTATTATACATCAATTAAATGCACAATCCAAGGCTCCATGCATGCCTCCACATCTCCATGACACAAGTCAGAGCTCATGTATATATGCTACATATGTCACTATATATATTTATATGTATATAGCATAGCCAGGTGATAAACTATACTTATTAATTATGCAGGTAATATGTAATTTGATAGCTTAATTAATTAATCCATGCATGCATGCAGAGATCAGATGCAGTAGGTGATTATTAATTAATTAGTGATCATACATAATTGAGGTGATTTATGATGGGCACTGGAAGCTGGAGGGGACGTGCTTGCCGCACTCGTTGACGAGCACGGAGATGGCAACGGGGAGGACGAGGCTGACGCCGAGCGCCTTGGCCTTGATGGCGGTGCAGAGGCAGAGCGCGGCGTCGAGGTCGGCGACGCCGGAC | |||||||||
gi|88989241|gb|CI042354.1|CI042354 CI042354 Oryza sativa (japonica cultivar-group) callus Oryza sativa Japonica Group cDNA clone AGCTCGTCATAGATGACCTC EST sequence (targeted fragment marked with yellow): TTTTTTTTTTTTTTTTTTGCGTATCCTTACCAACCAACCTGNTCAGATTTGCAAGGCAAAACCGTCTTTTAGGATACAGGCATTCGGACGCTCGATACTAACACCGAGCAACCATAGACTCTTCCCTGGGCTTAAACTAAAACTATACCCATCACTGATATATCATTTTATGATGAAACGATTGGGCAGCGAAATATACTGTACAAAGGGGGCAAACGGGCAAAACTCGCTCCATGTCATGGCTTCATTGGGGCGCAACACTGAGTGAAAAGAATAGTAGTAGAACTAGAAAAGCATACATCTATCTGGTGCAAACAAACTGAATGCAGAATGCGTGCAACCACGGTACATCGCCTGGTTCAACCACTGGTTCGTTCGGGTGACGGTCGTGAATGGCGAGATCAAAATCCGTTACCGCTTGCATCGGGATTGAATGGCAGCTGCTCCCCTGAGTGGCTAGATTTCCTTGACCTTGGTTGCTTTGGGGTCGAATATGGCGAGCTTCCATCTTGGAA | |||||||||
gi|88314145|gb|CI602477.1|CI602477 CI602477 Oryza sativa (japonica cultivar-group) flower Oryza sativa Japonica Group cDNA clone AGCTCGTCATAGATGACCTC EST sequence (targeted fragment marked with yellow): GATTCGACTCCTTCGTCTTCCTGCGCCCCTCTTTTCCGGGTCTAGGGTTTGCTGCTCCCCCTCCCCGCCGCCGCCGCCTCCGCCTCCGCCGCTCAGATGGGAGGCAAGTGCCCGCACCGCAAGGTCAAGAAGCGCCGCCTCTCGCACAAGACGGCCCGCCGAGGCAAGTTCCTCGTAAAGGCCGACGAGGCCGTCTACGACGAGCTGGTCAAGCTCGCCCGACGCCGGGAAGGACGCCGACGTTACCCAGCTCCCCGTCCAAGAGGACCCTCCCCGTCCTACTTTGCCAGTGAGAGTGTCACGGAGGCCACTACCGCTCCAAGCCCACAACA | |||||||||
gi|29630400|gb|CB635409.1|CB635409 OSIIEb15M11.r OSIIEb Oryza sativa Indica Group cDNA clone OSIIEb15M11 3', mRNA sequence AGCTCGTCATAGATGACCTC EST sequence (targeted fragment marked with yellow): AGACACAGTAAATGAACTCGTCTATGACGTGCTCATATCTAAAGTCCGACAGCGTCTCAATGAGGTTGCTCGCCTCCCAATTTGGTCATCGGTGGAGGAACCAGGTGGCCTTCCCCTTCCAAGCTTCAGTGCCTACCCGCAGGCATATGTGACCAGTGTTGGGGAGTATCTCCTAACTTTACCCCAGCAGTTGGAGCCACTTGCAGAAGGTATCTCAGGCGGTGAGGCTGGCAACGAGGAGGCTCAGTTCTTTGCTACTGAATGGATATTTAAGGTCGCGGAAGGCGCCACCGCGCTGTTCATGGAGCAGCTGCGAGGGATCCATTACATCACCGACCGAGGCGCGCAGCAGCTGGCGGCGGACATAGAGTACCTGAGCAACGTCCTCTCGGCGCTGTCCATGCCGATCCCACCCTTCCTCGCCACCTTCCACACCTGCATCTCCACCCCGAGAGACCAGGTCCGCGACCTCATCAAGTCTGACGGCGGCAGCCAGCTCGACCTCCCCACCGCCCATCTGGTCTGCAAGATCCGGCGCATCTCGTCATCAGATTAGTGAAACACAAAGGTTGCCTTGGTTTGTTCACGCCCTGTAACATCGTGTGCATCCATCCCTCCACCGTTTTCCCACATCCTGAGCAAACTGATCCTGCCGACGAGTGGTTGACAGTTTGACATGTGCTTGTAATTCTTTACCATTCTGCATCTTGGCTACAGAGGTGTGCCTGTGTAATCGTATTCCTTCCAGATAAATAATAAGGAAAAAAACTCGAGGGGGGGCCCGGTACCCAGCT | |||||||||
gi|29624315|gb|CB629326.1|CB629326 OSIIEb05H16.f OSIIEb Oryza sativa Indica Group cDNA clone OSIIEb05H16 5', mRNA sequence AGCTCGTCATAGATGACCTC EST sequence (targeted fragment marked with yellow): CTCAAGACGGCTGACCTTCTCCTCTGTCTGCTCTATTTGCTTCTAAGCTGTTGCATGAGGCTGGACTCCCAGAGTGGTGTTGATAACGTGGTATCTGGTTTTGGACCTACTGCTGGTGCTGCTCTTGCTAGTCACATGGATGTCTATAAAATTGCATTCACTGGATCGACCGATACTGGAAAAGTCGTCCTTGAGTTGGCTGCAAGGAGCAACCTTAAGTCAGTGACACTGGAGCTAGGAGGCAAGTCTCCTTTCATCATCATGGATGATGCTGATGTTGACCATGCTGTTGAGCTTGCGCATTTTGCACTGTTCTTTAACCAGCGACAATGTTGCTGTGCTGGGTCTCGTACACTTGTGCATGAGCGTATCTATGATGAGTTCGTGGAGAAAGCCAAGGCTCGTGCTCTCAAGCGTGTGGTTGGTGATCCATTCAAGAATGGTGTTGAACAGGGCCCTCAGATTGATGACGAGCAATTCAACTAGATCTTGCGCTACATCAAGTATGGTGTTGACAGTGGAGCCAACCTTGTGACTGGTGGCGACAGATTACGTGACAAATGTTACTACATCCAGCCAACAATTTTCTCGGATGTACAGGATAACATGAGGATTGCTCAACAATAGATATTTGGCCCTGTGCAGTCAATTCTGAAGTTCAATGATCTGAACTAGGTCATCGAGAGGGCAAATGCAATCCAGTACGGGCTGGCTGCTGGGGTCTTCACCAA | |||||||||
gi|29668906|gb|CB665181.1|CB665181 OSJNEd11F24.r OSJNEd Oryza sativa Japonica Group cDNA clone OSJNEd11F24 3', mRNA sequence AGCTCGTCATAGATGACCTC EST sequence (targeted fragment marked with yellow): AAATAAGTCGTTTGCTTGATCCAAGCCTTCAATGCGCAAATTTTATCTATGACGAGCTAGTCAAGATTAGCCGTGGTTGCTTATCCAGCGAGCTGCAGAAATACCCGATTCTTAAAAAGCGGATGGGTGAAGCAGTTAGCAATTTCTTGAGAGATGGTCTTCGACCTGCAGAGACAATGATAACCCATATTATTGAGATGGAGATGGATTACATAAATACTTCACATCCAAACTTTGTTGGAGGCAACAAGGTTGTTGAGCTTGCTAGGCAAGAAATTTTACCTCCCAAAGCACCAACCTCTGTAACGATTCATAAGGATGGTACTGCTATTAGTCCTGAGATACAATTAACATCTGACAGAAGTCAAAAGTCACGTGCTATTTTTGCAAGAGATGCTACTAGAGGAGCCACCTCTGATCAGGGAGTGCAGCCTGATGCTGATACAGGAACAAGTGTGGCAGGCAGAAATCAGAGGGGTCACTCACTGGTTGCTGGGAGTTCATCAAGCAAGTCAGTTGCACGAGTTCACAGCCTAGATAACCTTATCTCTATCATCCAGTTAAGAGAGCCACCCATCACTTTGAAGCCATCAGAAAACCAGCCTGCACAGGATGCAACAGAGGTAGCCATTGTGAAACTATTGATCAAATCGTACTATGACATTGTCAGAAAGAGTATTGAAGATGCTGTTCCAAAGGCTATAATGCATTTTCTGGTGAACCACACAAAGCGTGAGCTGCATAATGTTTTAATCCGGAAACTGTACAGAGAAAACCTGCTGGATGAAATGCTGAGGGAAACTGATGAAGTAATTATCAGAAGGCAGCGTATACAAGAAACACTCCAAGTTCTTGAACAGGCTCATAGGACGCTCGAGGGGGGGCCCGGTACCCAGCTTTGTC | |||||||||
gi|88395759|gb|CI590774.1|CI590774 CI590774 Oryza sativa (japonica cultivar-group) flower Oryza sativa Japonica Group cDNA clone AGCTCGTCATAGATGACCTC EST sequence (targeted fragment marked with yellow): GGGACTCTCCCGATCCTTCCCCAACTCGGCGTCGCGCCGCCTCAACCGAAGCAAGGAGCAAAGCGGGGATTCAGAACGGGAAGGAGAAGGTCCGGTTCGTCCGCTCTCGAGCTCAAGTGTCAGTTGAAGTGTTTTGAAAGTCATGGCGGAGCATTTGGCTTCAATATTTGGGACTGAGAAGGATAGGGTTAACTGCCCCTTTTACTTCAAGATTGGGGCTTGCCGTCATGGGGATCGTTGCTCCCGTCTGCACAACAGGCCAACTGTGTCGCCGACAATTGTGCTTGCTAACATGTATCAGGGCCCTGATATGATCACACCAGGAGTCGATGCTCAAGGCCAACCTATTGATCCTGAAAAGATGCAGGAGCACTTTGAGGATTTCTATGAGGATATCTATGAGGAGCTGAGCAAGTTTGGTGAGGTTGAG | |||||||||
gi|86481513|gb|CI124146.1|CI124146 CI124146 Oryza sativa (japonica cultivar-group) supermix Oryza sativa Japonica Group cDNA clo AGCTCGTCATAGATGACCTC EST sequence (targeted fragment marked with yellow): TTTAAATGAACAGAGCTTCTCTTTGCAAATCACCAGTGATCGACTGAAATCACCAAACTTATACTGGTACAGACCAGCCAACTTTATGCAACACAAATTTGTTTTGCGTATCCTTACCAACCAACCTTGTCAGATTTTGCAAGGCAAAACCGTCTTTTAGGATACAGGCATTCGGACGCTCGATACTAACACCGAGCAACCATAGACTCTTCCCTGGGCTTAAACTAAAACTATACCCATCACTGATATATCATTTTATGATGAAACGATTGGGCAGCGAAATATACTGTACAAAGGGGGCAAACGGGCAAAACTCGCTCCATGTCATGGCTTCATTGGGGCGCAACACTGAGTGAAAAGAATAGTAGTAGAACTAGAAAAGCATACATCTATCTGGTGCAAACAAACTGAATGCAGAATGCGTGCAACCACGGTACATCGCCTGGTTCAACCACTGGTTCGTTCGGGCGACGGTCGTGAATGGCGAGATCAAAATCCGTTACCGCTTGCATCGGGATTGAATGGCAGCTGCTCCCCTGAGTGGCTAGATTTCCTTGACCTTGGTTGCTTTGGGGTCGAATATGGCGAGCTTCCATCTTG | |||||||||
gi|117213031|gb|CT844593.1|CT844593 CT844593 Oryza sativa (indica cultivar-group) cv. Guang Lu Ai 4 Oryza sativa Indica Group cD AGCTCGTCATAGATGACCTC EST sequence (targeted fragment marked with yellow): GACATGAATTACTTGGTCATTCGACTCCTTCGTCTTCCTCCGCCCCTCTTCTCCGGGTCTAGGGTTTGCTGCTCCCCCTCCCCGCCGCCGCCGCCTCCGCCTCCGCCGCTCAGATGGGAGGCAAGTGCCCGCACCGCAAGGTCAAGAAGCGCCGCCTCTCGCACAAGACGGCCCACCGAGGCAAGTTCCTCGTCAAGGCCGACGACGCCGTCTACGACGAGCTGGTCAAGCTCGCCGACGCCGGCAAGGACGCCGACGCTACCCAGCTCCCCGTCGACGAGGACCTCCCCGGTATGGGACAGTTCTACTGCCTCCACTGCGATCGCTACTTTGCAAGTGAGAGTGTCAAGGAGGAGCACTACCGCTCAAAGCGCCACAAGAAAAGGATCAAGCAAATGTCAGGGCCAGCCCCACATACTCAACTTGATGCAGAGCTTGCTGCTGGAATGGGGATGCCTGACAATGGCCTGAAGCTCATGTCCATGTGAACCTCTTCTTGTTCCTGGTTTTTACTCTTATATGTTTTTGTCACTGCCGTACGTATGTACTTGCTCTGCTTAGTAGTTAATGGAGTTGAGTTGATGGTGTCTGTTGGTCCAAAAAAAAAAAAAAAAAAAAGGCCAGCTTGGCCTAGGGGGGGCGTTACTCTGTTTTGCCTGCCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGGGAAAAAAAAAAAAAAAAACAAAAA | |||||||||
gi|88267836|gb|CI379969.1|CI379969 CI379969 Oryza sativa (japonica cultivar-group) callus Oryza sativa Japonica Group cDNA clone AGCTCGTCATAGATGACCTC EST sequence (targeted fragment marked with yellow): GTAATGCATTCCATCCAGAGAACCAAACATTAAAATTAGCCATGCCATATATATATACACACCAAAAAAAGGCTGCTTCTGATGTAAGACTCCTAACATCCCATTCCAGCGACGGCGAACCATAATCTAATTACAAAAGCTAAATAACCCTCTCTGTCCAATGATCAGAGCAATTCAAAAGACATGGCCATCACCCATGGTGAGGAAAATCGGGTGCATAAATTAATGGTGCTAAGGCTTGGTCATAAGCTATAGCTGATAGGACTATGTCAGTCTTGCTACGACAAAATTCACCAGCTAGCTCCACAAAAGGATCATGAGCTGCCCTCATATTCCGAATAGATATGGGAGATCATCTATGGTGAGCCCGAGTTGCACTGCCGCCAGGTTGGTCCTCACCCAAAAGCAGATGGGACAATTTTTCTTTTCTTCTCCTGTAGAG | |||||||||
gi|163927581|gb|EG713925.1|EG713925 Os6CPREST1779 6cm rice panicles Oryza sativa Japonica Group cDNA clone 6CPR-J4G03SA, mRNA se AGCTCGTCATAGATGACCTC EST sequence (targeted fragment marked with yellow): CCTCTTCTCCGGGTCTAGGGTTTGCTGCTCCCCCTCCCCGCCGCCGCCGCCTCCGCCTCCGCCGCTCAGATGGGAGGCAAGTGCCCGCACCGCAAGGTCAAGAAGCGCCGCCTCTCGCACAAGACGGCCCGCCGAGGCAAGTTCCTCGTCAAGGCCGACGACGCCGTCTACGACGAGCTGGTCAAGCTCGCCGACGCCGGCAAGGACGCCGACGCTACCCAGCTCCCCGTCGACGAGGACCTCCCCGGTATGGGACAGTTCTACTGCCTCCACTGCGATCGCTACTTTGTAAGTGAGAGTGTCAAGGAGGAG | |||||||||
gi|58611238|gb|CK038950.1|CK038950 35998rsiceg_5322.y1 Oryza sativa cv. 93-11 tillering whole plant cDNA library Oryza sativa cD AGCTCGTCATAGATGACCTC EST sequence (targeted fragment marked with yellow): GCACGAGGGAGAACTAGTCTCGAGTTTTTTTTTTTTTTTTTTTTTTTTTTATGCAACACAAATTTGTTTTGCGTATCCTTACCAACCTTGTCAGATTTTGCAAGGCAAAACCGTCTTTTAGGATACAGGCATTCGGACGCTCGATACTAACACCGAGCAACCATAGACTCTTCCCTGGGCTTAAACTAAAACTATACCCATCACTGATATATCATTTTATGATGAAACGATTGGGCAGCGAAATATACTGTACAAAGGGGGCAAACGGGCAAAACTCGCTCCATGTCATGGCTTCATTGGGGCGCAACACTGAGTGAAAAGAATAGTAGTAGAACTAGAAAAGCATACATCTATCTGGTGCAAACAAACTGAATGCAGAATGCGTGCAACCACGGTACATCGCCTGGTTCAACCACTGGTTCGTTCGGGTGACGTCGTGAATGGCGAGATCAAAATCCGTTACCGCTTGCATCGGGATTGAATGGCAGCTGCTCCCCTGAGTGGCTAGATTTCCTTGACCTTGGTTGCTTTGGGGTCGAATATGGCGAGCTTCCATCT | |||||||||
gi|29624317|gb|CB629328.1|CB629328 OSIIEb05H17.f OSIIEb Oryza sativa Indica Group cDNA clone OSIIEb05H17 5', mRNA sequence AGCTCGTCATAGATGACCTC EST sequence (targeted fragment marked with yellow): ATTTGCTTCTAACCTGTTGCATGAGGTGTGGACTCCCAGATGGTGATGTTAACCCCGAATCTGGATTTGAACCTACTGCTGGTGCTGCTCTTGCTAGTCACTTGGATGTCGATAACATTGTATTCACTGGATCTACCGATACTGGAAAATTCTTCCTTGAATTGGCTGCAAGGAGCAACCTTAAGTCAGTGACACTGGAGCTAGGAGGCAAGTCTCCTTTCATCATCATGGATGATGCTGATGTTGACCATGCTGTTGAGCTTGCGCATTTTGTACTGTTCTTTAACCAGGGACAATGTTGCTGTGCTGGGTCTCGTACACTTGTGCATGAGCGTATCTATGATGAGTTCGTGGAGAAGGCCAAGGCTCGTGCTCTCAAGCGTGTGGTTGGTGATCCATTCAAGAATGGTGTTGAACAGGGCCCTCAGATTGATGACGAGCAATTCAACAAGATCTTGCGCTACATCAAGTATGGTGTTGACAGTGGAGCCAACCTTGTGACTGGTGGCGACAGATTAGGTGACAAAGGTTACTACATCCAGCCAACAATTTTCTCGGATGTACAGGATAACATGAGGATTGCTCAAGAAGAGATATTTGGCCCTGTGCAGTCAATTCTGAAGTTCAATGATCTGAACGAGGTCATCAAGAGGGCAAATGCAATCCAGTACGGGCTGGCTGCTGGGGTCTTCACCAACAACCTGAACA | |||||||||
gi|86520717|gb|CI160923.1|CI160923 CI160923 Oryza sativa (japonica cultivar-group) Panicles mixture of one, two, three weeks aft AGCTCGTCATAGATGACCTC EST sequence (targeted fragment marked with yellow): TTGTTTTTTGTTGTGCAAATCACCAGTGATCGACTGAAATCACCAAACTTATATCTGGTACAGACGGCCAACTTTATGCAACACAAATTTGTTTTGCGTATCCTTACCAACCAACCTTGTCAGATTTTGCAAGGCAAAACCGTCTTTTAGGATACAGGCATTCGGACGCTCGATACTAACACCGAGCAACCATAGACTCTTCCCTGGGCTTAAACTAAAACTATACCCATCACTGATATATCATTTTATGATGAAACGATTGGGCAGCGAAATATACTGTACAAAGGGGGCAAACGGGCAAAACTCGCTCCATGTCATGGCTTCATTGGGGCGCAACACTGAGTGAAAAGAATAGTAGTAGAACTAGAAAAGCATACATCTATCTGGTGCAAACAAACTGAATGCAGAATGCGTGCAACCACGGTACATCGCCTGGTTCAACCACTGGTTCGTTCGGGTGACGGTCGTGAATGGCGAGATCAAAATCCGTTACCGCTTGCATCGGGATTGAATGGCAGCTGCTCCCCTGAGTGGCTAGATTTCCTTGGACCTTGGTTGCTTTGGGGTCGAATATGGCGAGCTTCCATCTTGGAAGGATGAAGAAAGCCCATGAGCCCTTGGTAGACCTGTTGCATCGGCATCCAGGGAATAGCCTCTCTCAACTGTGTCCGCTTCAAGTGGTATCTCATCCAAAGTCTTG | |||||||||
gi|29668930|gb|CB665205.1|CB665205 OSJNEd11G22.r OSJNEd Oryza sativa Japonica Group cDNA clone OSJNEd11G22 3', mRNA sequence AGCTCGTCATAGATGACCTC EST sequence (targeted fragment marked with yellow): TCAATGCGCAAATTTTATCTATGACGAGCTAGTCAAGATTAGCCGTGGTTGCTTAACCAGCGAGCTGCAGAAATACCCGATTCTTAAAAAGCGGATGGGTGAAGCAGTTAGCAATTTCTTGAGAGATGGTCTTCGACCTGCAGAGACAATGATAACCCATATTATTGAGATGGAGATGGATTACATAAATACTTCACATCCAAACTTTGTTGGAGGCAACAAGGTTGTTGAGCTTGCTAGGCAAGAAATTTTACCTCCCAAAGCACCAACCTCTGTAACGATTCCTAAGGATGGTACTGCTATTAGTCCTGAGATACAATTAACATCTGACAGAAGTCAAAAGTCACGTGCTATTTTTGCAAGAGATGCTACTAGAGGAGCCACCTCTGATCAGGGAGTGCAGCCTGATGCTGATACAGGAACAAGTGTGGCAGGCAGAAATCAGAGGGGTCACTCACTGGTTGCTGGGAGTTCATCAAGCAAGTCAGTTGCACGAGTTCACAGCCTAGATAACCTTATCTCTATCATCCAGTTAAGAGAGCCACCCATCACTTTGAAGCCATCAGAAAACCAGCCTGCACAGGATGCAACAGAGGTAGCCATTGTGAAACTATTGATCAAATCGTACTATGACATTGTCAGAAAGAGTATTGAAGATGCTGTTCCAAAGGCTATAATGCATTTTCTGGTGAACCACACAAAGCGTGAGCTGCATAATGTTTTAATCCGGAAACTGTACAGAGAAAACCTGCTGGATGAAATGCTGAGGGAAACTGATGAAGTAATTATCAGGAGGCAGCGTATACAAGAAACACTCCAAGTTCTGAACAAGCTCATAGGACGCTCGAGGGGGGGCCCGGTACCCAGCTTTGTC | |||||||||
gi|88691164|gb|CI735243.1|CI735243 CI735243 Oryza sativa (japonica cultivar-group) 2 nuclei stage pistil Oryza sativa Japonica G AGCTCGTCATAGATGACCTC EST sequence (targeted fragment marked with yellow): GGAGGATATCTATGAGGAGCTGAGCAAGTTTGGTGAGGTTGAGACCCTCAATGTCTGTGATAACCTTGCTGACCACATGATAGGCAATGTGTATGTCCAGTTCAGGGAGGAAGAACAGGCAGTCGCTGCGCATAATGCCCTTCAAGGTCGCTTCTACTCAGGGCGCCCAATAATTGTTGAGTATTCCCCTGTGACTGATTTCCGTGAGGCGACCTGTAGGCAGTTTGAGGAGAACAGCTGCAACCGTGGGGGCTACTGTAATTTTATGCATGTAAAGCAGATTGGCAGGGAGCTCAGGAGGAAGCTTTATGGGGGGCGATCCAGGAGGAGCCATGGGAGAAGCCGCAGCCCAAGCCCACGCCACAGGAGGGGCAATC | |||||||||
gi|88208354|gb|CI208203.1|CI208203 CI208203 Oryza sativa (japonica cultivar-group) same as Lib 33(supermix) Oryza sativa Japonic AGCTCGTCATAGATGACCTC EST sequence (targeted fragment marked with yellow): TCATAGCATACATATCACACACTCTTTATTTCATAATAAATCTCCCAAACCACTACAAACCAAATACCACAACTCCACATGCATATATGCATGACACAGCAAAATATATGTTACACAAATATTATTATACATCAATTAAATGCACAATCCAAGGCTCCATGCATGCCTCCACATCTCCATGACACAAGTCAGAGCTCATGTATATATGCTACATATGTCACTATATATATTTATATGTATATAGCATAGCCAGGTGATAAACTATACTTATTAATTATGCAGGTAATATGTAATTTGATAGCTTAATTAATTAATCCATGCATGCATGCAGAGATCAGATGCAGTAGGTGATTATTAATTAATTGGTGATCATACATAATTGAGGTGATTTATGATGGGCACTGGAACCTGGAGGGGACGTGCTTGCCGCACTCGTTGACGAGCACGGAGATGGCAACGGGGAGGACGAGGCTGACGCCGACCGCCTTGGCCTTGATGGCGGT | |||||||||
gi|86830225|gb|CI290385.1|CI290385 CI290385 Oryza sativa (japonica cultivar-group) etiolated shoot Oryza sativa Japonica Group c AGCTCGTCATAGATGACCTC EST sequence (targeted fragment marked with yellow): CACATGGATGTCGATAAGATTGCATTCACTGGATCGACCGATACTGGAAAAGTCGTCCTTGAGTTGGCTGCAAGGAGCAACCTTAAGTCAGTGACACTGGAGCTAGGAGGCAAGTCTCCTTTCATCATCATGGATGATGCTGATGTTGACCATGCTGTTGAGCTTGCGCATTTTGCACTGTTCTTTAACCANGGACAATGTTGCTGTGCTGGGTCTCGTACATTTGTGCATGAGCGTATCTATGATGAGTTCGTGGAGAAGGCCAAGGCTCGTGCTCTCAAGCGTGTGG | |||||||||
gi|88515955|gb|CI443609.1|CI443609 CI443609 Oryza sativa (japonica cultivar-group) 4th leaf leaf 3mM SA(salicylic acid) for 1 da AGCTCGTCATAGATGACCTC EST sequence (targeted fragment marked with yellow): CTTTTTTTTTTTTCAGTCTTTCGAATTGACCCTGTGTCCCTGTTGACATGAACTCACGACTTGGTTTGTTTCGGGCACAGTGAACTCAAGACCAGTATTTTCAGAGAAAACTGGAACAGGGCTTAACGAATTAAGCAACCGACAGTCTTTCAGAGACAGAATTGAGTTCAACTATAACGAGCTCTCAGGGTAACCACAAAAACGCCCTCAAGAGTTCATCTACTTTCAGAGGCTGTGTTTACAACTAAACTTCAGTCATTTTCCATCACCTCAACCTCTTGCATGGGTCCAATTGCCGCCTTCAAATGGTATACTCCTGGTAATTCTGAAATAATCACAAAACAGGCTGTGCTNTTGTGAAAATACCAACTCCTCCACCACCANACCGATCGCCCCCAGGAGCATATCGCGGTCAAGGTA | |||||||||
gi|86427029|gb|CI072126.1|CI072126 CI072126 Oryza sativa (japonica cultivar-group) NAA treated callus Oryza sativa Japonica Grou AGCTCGTCATAGATGACCTC EST sequence (targeted fragment marked with yellow): TTTTTTTTTTTTTTTTTCAGCGAAATATACTGTACAAAGGGGGCAAACGGGCAAAACTCGCTCCATGTCATGGCTTCATTGGGGCGCAACACTGAGTGAAAAGAATAGTAGTAGAACTAGAAAAGCATACATCTATCTGGTGCAAACAAACTGAATGCAGAATGCGTGCAACCACGGTACATCGCCTGGTTCAACCACTGGTTCGTTCGGGTGACGGTCGTGAATGGCGAGATCAAAATCCGTTACCGCTTGCATCGGGATTGAATGGCAGCTGCTCCCCTGAGTGGCTAGATTTCCTTGACCTTGGTTGCTTTGGGGTCGAATATGGCGAGCTTCCATCTT | |||||||||
gi|88200886|gb|CI198738.1|CI198738 CI198738 Oryza sativa (japonica cultivar-group) root of seedlings Oryza sativa Japonica Group AGCTCGTCATAGATGACCTC EST sequence (targeted fragment marked with yellow): AAACTAAAACTATACCCATCACTGATATATCATTTTATGATGAAACGATTGGGCAGCGAAATATACTGTACAAAGGGGGCAAACGGGCAAAACTCGCTCCATGTCATGGCTTCATTGGGGCGCAACACTGAGTGAAAAGAATAGTAGTAGAACTAGAAAAGCATACATCTATCTGGTGCAAACAAACTGAATGCAGAATGCGTGCAACCACGGTACATCGCCTGGTTCAACCACTGGTTCGTTCGGGTGACGGTCGTGAATGGCGAGATCAAAATCCGTTACCGCTTGCATCGGGATTGAATGGCAGCTGCTCCCCTGAGTGGCTAGATTTCCTTGACCTTGGTTGCTTCGGGGTCGAATATGGCGAGCTTCCATCTTGGAAGGATGAAGAAAGCCCATGAGCCCTTGGTAGGCCTGTTGCATCGGCATCCAGGGAATAGCCTCTCTCAACTGTGTCCGCTTCAAGTGGTATCTCATCCAAAGTCTTGTATGCTTGCTGAAGGACCTTGAGGGTGTCACGTATTTGCCTCCTCTTTATGGTTATTTCATCGGGTTCTCTGAGCATGTCCGCAAAGAGGTCGTCTCTATAAAGCTTAGTTATAAGGTAATTATGCAGCTCCCGTTTTGTGTGGTTAACCAGAAAATGCATGATTGCCTTTGGAACGAAGTCCTCAACATTTTTCCGCACTATATTGTAATA | |||||||||
gi|117242500|gb|CT849596.1|CT849596 CT849596 Oryza sativa (indica cultivar-group) cv. Guang Lu Ai 4 Oryza sativa Indica Group cD AGCTCGTCATAGATGACCTC EST sequence (targeted fragment marked with yellow): AACGACACGGCCAGCTTCCAGGAGTCCTTCACCAACATCTACACCGCTGATAGCCTCCAGAAGCCTTGGTACATTGTTCTCGGCAACCACGACTACACTGGAGATGCCCTCGCACAGCAGAGCCCCGCCATTCGCGCCGTCGATAGCCGTTGGACCTCCATTAACAAGTCCTTCATCGTCGACTCAGATATCGCGGAGTTCTTCTTGGTGGACACGGTGCCATTCGTGCAGAAGTATTGGAACGAGAGTAAGTTCGACTGGAGACAGGTCGCCCCTCGTGACACCTACCTCTCCACTCTACTCACAGATTTAGGAGACGCGATGTCGCAGTCGAATGCGACGTGGAAGATCGTGGTTGGACACCACACCATCAGCAGCGGCTGCGAGCACGGCAACACCACCGACCTCGTCGCCATGCTCCTCCCTGTCCTCAAGACCTATGGGGCTGACATGTACATCAACGGCCATGATCATTGTTTGCAGCGCATCACCAGCATTGACAGCCCACTTGAATTCATCACGAGCGGGGGCGGGTCGAGGGCATGGGCGGGGAAGTTTAAGCAAACCTCGGACAAGCTGGAGTTCATCTATGACGGGCAAGGGTTCCTGTCGATGCAGCTGACGATGGCGGAGGCCAGCTTCGCCTTCTATGACGTCACCGGCGCCGTCCTGTACAGCTGGCAGCTCGCCAAGTCAACCTCCACCAACTAGTGAACAAAGTCAACCCTTAATTATTGTGTTAATTAGCTGCTTATGTGTGTGAAATTGGAACAGTCAATGTACTGCTTCAGTTATCGATATATATACTGTGACAAAAGATGCACGGTGTATAAATAGTGTGTGTGTTTGTATACGTAAGTATGCAAGAATGTTGCTGTTTGTAATTGCATCCTAAGTTCATGGGATAAGTTATAATGGCTATCTAAATGAAAAAAAAAGTGGCGTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGGGAAAAAAAAAAAAAAAAAAAGGGGCCCCTTGGGGCCCCCGGGGGGGGGCCCGGGCCCAATTTCCCCAATAGGGGGGTTAAAATACCCCCCCCCCCCGGGCCCCCCGTTTTAAAACCC | |||||||||
gi|88481256|gb|CI418527.1|CI418527 CI418527 Oryza sativa (japonica cultivar-group) leaf of seedling gamma-irradiated (4min), aft AGCTCGTCATAGATGACCTC EST sequence (targeted fragment marked with yellow): CATTTAAGCACAACATAGCACGTTTTATACTATATATGAAAGTTGACAGAATGACAGGCTTTATCAGCCACACATATACATATGATACATACACATCAAACTTTGTATTTCATAGCATACATATCACACACTCTTTATTTCATAATAAATCTCCCAAACCACTACAAACCAAATACCACAACTCCACATGCATATATGCATGACACAGCAAAATATATGTTACACAAATATTATTATACATNAATTAAATGCACAATCCAAGGCTCCATGCATGCCTCCACATCTCCATGACACAAGTCAGAGCTCATGTATATATGCTACATATGTCACTATATATATTTATATGTATATAGCATAGCCAGGTGATAAACTATACTTATTAATTATGCAGGTAATATGTAATTTGATACCTTAATTAATTAATCCATGCATGCATGCAGAGATAAGATGCAGTAGGTGATTATTAATTAATTAGCGATCATAACTAATTGAGGTGATTTATGACGGGCC | |||||||||
gi|88282195|gb|CI403591.1|CI403591 CI403591 Oryza sativa (japonica cultivar-group) callus suspension-cultured cells treated with AGCTCGTCATAGATGACCTC EST sequence (targeted fragment marked with yellow): GTAATGCATTCCATCAGAGAACCAACATTAAAATTAGCATGCCATATATATATACACACAAAAAAAGGCTGCTTCTGATGTAAGACCTCCTAACATCCCATTCCAGCGACGGCGAACATAATCTAATTACAAAAGCTAACTAACCCTCTCTGTCCAATGATCAGAGCAATTCAAAAGACATGGCATCACCCATGGTGAGGAACATCGGGTGCATAAATTAATGGTGCTAAGGCTTTGTCATCAGCTATAGCTGATAGGACTATGTCAGTCTTGCTACGACAAAATTCACCAGCTAGCTCCACAAAAGGATCATGAGCTGCCCTCATATTCCGAATAGATATTGGAGATCATCTATGGTGAGCCGAGTTGCACTGCCCGCAGGTTTGTCCTCACCAAAAACAGATTGGACCATCTTTCTCTTCTTCTCCTG | |||||||||
gi|88690271|gb|CI734350.1|CI734350 CI734350 Oryza sativa (japonica cultivar-group) library (Kikuchi S) Oryza sativa Japonica Gro AGCTCGTCATAGATGACCTC EST sequence (targeted fragment marked with yellow): GGAGGATATCTATGAGGAGCTGAGCAAGTTTGGTGAGGTTGAGACCCTCAATGTCTGTGATAACCTTGCTGACCACATGATAGGCAATGTGTATGTCCAGTTCAGGGAGGAAGAACAGGCAGTCGCTGCGCATAATGCCCTTCAAGGTCGCTTCTACTCAGGGCGCCCAATAATTGTTGAGTATTCCCCTGTGACTGATTTCCGTGAGGCGACCTGTAGGCAGTTTGAGGAGAACAGCTGCAACCGTGGGGGCTACTGTAATTTTATGCATGTAAAGCAGATTGGCAGGGAGCTCAGGAGGAAGCTTTATGGGGGGCGATCNACGAGGAGCCATGGGAGAAGC | |||||||||
gi|86416687|gb|CI030698.1|CI030698 CI030698 Oryza sativa (japonica cultivar-group) etiolated shoot Oryza sativa Japonica Group c AGCTCGTCATAGATGACCTC EST sequence (targeted fragment marked with yellow): TTTTTGGAAGATCACAGAAAGATTATGGCAAAACAACGAGTAGTTCAACACAATTCACCACTGACAATCATGGGGAAAAAAAAAGGAACAATCCTCCTACTAAAGTAGTACAAACAAAGGAGAAATTGGAAGTTTCAACAGTGTGAAACAAACCAAAACAACACGACGCACCCTGTTACTTGCCTACTTGGGCGGGGTGGGCGGTGCGAACTGCTGCGGCGGCGCGGGCGGTGCAAACTGCTGCGGCGATGCGGCCTCCGCGCGGCCACGGTTCCGGCCGAGCAGGTAGCACCCCAGCGCGATGACGAGAACCAGGAGGATCGCCGGGATCGATATCACGAGCTCAAACATGGATGCTGAACAATGAATAGCCCCCCGCGCCTCCTCTTCACCTCGATCCAACCCTGCGCTTCCGCGACCGCGCGGTGCTAGACGAAACCGGAAGGCGCCGACGAACCTGGAGAAGACGGGCGCGCGAGGCCCTCTATGGCGAGCGGTGCAACTTCCCAGCGG | |||||||||
gi|117236033|gb|CT849085.1|CT849085 CT849085 Oryza sativa (indica cultivar-group) cv. Guang Lu Ai 4 Oryza sativa Indica Group cD AGCTCGTCATAGATGACCTC EST sequence (targeted fragment marked with yellow): ACGTTCACTCGAAGTTGATGATAGTCGACGATAAATACGTCATTTGCGGCTCGGCGAACATAAACGATCGCAGCATGTTAGGAAAGCGCGATTCCGAAGTGGCCGCTGTCATTAAAGATCAGGAGTTCATCGAGGCAACGTTAAGTGGGCAAAAAGTAATGGTTGGTAAATATGCCAACTCTCTGAGGAAAAAGATCTTCAAGCTTCATCTTGGAATCTACTATGATAATTCCAATAAAATCGAAGTACAGGATTGCGTATCAGAAGAGTTCTACAATTTGTTTCGAATAACGTCGCACCAAAACACGGTTATCTATGACGAGGTGTTCAAATGCCTTCCCTCCGATAATATCCTCAATTTCGAGCATTTGACCACGTATTTGGAGCGATCGGCTTTATGCAAGCATGATCCATATAAAGGAAAACAAGAATTGGAGGCTAATATAAAAGGATTCATTGTCGACTTTCCGCTCAAGTTTTTATCTCAAGAGAAGAATTTCTTCCCGGAGATAAACACTCCCGAAGGAATGGTGCCAACTGCTATGTGGACTTGAAAAGAGAGCTAGCTCAAATTTTTTATTTATTAAGCATCTTTTTTTCTTCTTCTATCTATTTCTTCTATTATTTAGATCTTTCTTTTTTTTGTGCTGTTTATTTAAATCTAAATTCTGCCAGTATTCAATCTATTTATAGATATATTATGTAATTTAATACATCATCTTAGGGAGATTCTTTCGTTTTTAATAATTTTAGTTGTATTATTCTACTTTAATAAATTTCTTATTAAAAATCATATCTTAATGTTTTAGAAAACGATTTTTTTTTCGAATGTTTTTTTCTAGATTATATTTATTTTTTAAATC | |||||||||
gi|29621582|gb|CB626593.1|CB626593 OSIIEa16O24.f OSIIEa Oryza sativa Indica Group cDNA clone OSIIEa16O24 5', mRNA sequence AGCTCGTCATAGATGACCTC EST sequence (targeted fragment marked with yellow): GGCCAAAGATGACTGCCTATGAGAGATCCCGGATTCTGTTGCGGTTTGCTGACTTGATTGAGAAGCACAACGATGAAATTGCTGCATTGGAGACATGGGACAACGGCAAGCCGTATGCGCAAGCTGCCAACATTGAAGTGCCAATGGTGGCACGGCTGATGCGGTACTATGCTGGTTGGGCTGACAAGATCCATGGGCTTGTCGTGCCGGCTGACGGCCCACACCATGTACAGGTGCTGCACGAGCCCATTGGTGTCGCAGGTCAGATCATCCCATGGAACTTTCCGCTTCTGATGTTTGCGTGGAAAGTTGGCCCTGCTTTGGCTTGTGGAAACACTGTTGTGCTCAAGACGGCTGAGCAAACTCCTCTGTCTGCTCTATTTGCTTCTAAGCTGTTGCATGAGGCTGGACTCCCAGATGGTGTTGTTAACGTGGTATCTGGTTTTGGACCTACTGCTGGTGCTGCTCTTGCTAGTCACATGGATGTCGATAAGATTGCATTCACTGGATCGACCGATACTGGAAAAGTCGTCCTTGAGTTGGCTGCAAGGAGCAACCTTAAGTCAGTGACACTGGAGCTAGGAGGCAAGTCTCCTTTCATCATCATGGATGATGCTGATGTTGACCATGCTGTTGAGCTTGCGCATTTTGCACTGTTCTTTAACCAGGGACAATGTTGCTGTGCTGGGTCTCGTACATTTGTGCATGAGCGTATCTATGATGAGTT | |||||||||
gi|88981465|gb|CI027083.1|CI027083 CI027083 Oryza sativa (japonica cultivar-group) etiolated shoot Oryza sativa Japonica Group c AGCTCGTCATAGATGACCTC EST sequence (targeted fragment marked with yellow): TTGGCAAAACAACGAGTAGTTCAACACAATTCACCACTGACAATCATGGGGAAAAAAAAAGGAACAATCCTCCTACTAAAGTAGTACAAACAAAGGAGAAATTGGAAGTTTCAACAGTGTGAAACAAACCAAAACAACACGACGCACCCTGTTACTTGCCTACTTGGGCGGGGTGGGCGGTGCGAACTGCTGCGGCGGCGCGGGCGGTGCAAACTGCTGCGGCGATGCGGCCTCCGCGCGGCCACGGTTCCGGCCGAGCAGGTAGCACCCCAGCGCGATGACGAGAACCAGGAGGATCGCCGGGATCGATATCACGAGCTCAAACATGGATGCTGAACAATGAATAGCCCCCCGCGCCTCCTCTTCACCTCGATCCAACCCTGCGCTTCCGCGACCGCGCGGTGCTAGACGAAACCGGAAGGCGCCGACGAACCTGGAGAAGACGGGCGCGCGAGGCCCTCTATGGCGAGCG | |||||||||
gi|58689165|gb|CK077852.1|CK077852 80331rsicen_5545.y1 Oryza sativa cv. LYP9 booting whole plant cDNA library Oryza sativa Indic AGCTCGTCATAGATGACCTC EST sequence (targeted fragment marked with yellow): CAAAGTTAAAAACGATAACATATGAACTTGTTTTTATTTAGCATATGCTCCCTTTGTTGTCTACTTTTTCTGTATGTAATGCGCTATGACGACTCTAAATCGAGGTATTTCTTTCTCCCTGTAGTTACTAGATAAGCCATTCATATACATATATATAGAAGCACTTCTTGAGATTTGGACAATAAATTCTGACAATTTTTTTTAATCTTTTTGTTATGTACAGCTCAAGTGTCAGTTGAAGTGTTTTGAAAGTCATGGCGGAGCATTTGGCTTCAATATTTGGGACTGAGAAGGATAGGGTTAACTGCCCCTTTTACTTCAAGATTGGGGCTTGCCGTCATGGGGATCGTTGCTCCCGTCTGCACAACAGGCCAACTGTGTCGCCGACAATTGTGCTTGCTAACATGTATCAGCGCCCTGATATGATCACACCAGGAGTCGATGCTCAAGGCCAACCTATTGATCCTGAAAAGATGCAGGAGCACTTTGAGGATTTCTATGAGGATATCTATGAGGAGCTGAGCAAGTTTGGTGAGGTTGAGACCCTCCATGTCTGTGATAAC | |||||||||
gi|29668904|gb|CB665179.1|CB665179 OSJNEd11F23.r OSJNEd Oryza sativa Japonica Group cDNA clone OSJNEd11F23 3', mRNA sequence AGCTCGTCATAGATGACCTC EST sequence (targeted fragment marked with yellow): CGTTTGCTTGATCCAAGCCTTCAATGCGCAAATTTTATCTATGACGAGCTAGTCAAGATTAGCCGTGGTTGCTTAACCAGCGAGCTGCAGAAATACCCGATTCTTAAAAAGCGGATGGGTGAAGCAGTTAGCAATTTCTTGAGAGATGGTCTTCGACCTGCAGAGACAATGATAACCCATATTATTGAGATGGAGATGGATTACATAAATACTTCACATCCAAACTTTGTTGGAGGCAACAAGGTTGTTGAGCTTGCTAGGCAAGAAATTTTACCTCCCAAAGCACCAACCTCTGTAACGATTCCTAAGGATGGTACTGCTATTAGTCCTGAGATACAATTAACATCTGACAGAAGTCAAAAGTCACGTGCTATTTTTGCAAGAGATGCTACTAGAGGAGCCACCTCTGATCAGGGAGTGCAGCCTGATGCTGATACAGGAACAAGTGTGGCAGGCAGAAATCAGAGGGGTCACTCACTGGTTGCTGGGAGTTCATCAAGCAAGTCAGTTGCACGAGTTCACAGCCTAGATAACCTTATCTCTATCATCCAGTTAAGAGAGCCACCCATCACTTTGAAGCCATCAGAAAACCAGCCTGCACAGGATGCAACAGAGGTAGCCATTGTGAAACTATTGATCAAATCGTACTATGACATTGTCAGAAAGAGTATTGAAGATGCTGTTCCAAAGGCTATAATGCATTTTCTGGTGAACCACACAAAGCGTGAGCTGCATAATGTTTTAATCCGGAAACTGTACAGAGAAAACCTGCTGGATGAAATGCTGAGGGAAACTGATGAAGTAATTATCAGAAGGCAGCGTATACAAGAAACACTCCAAGTTCTTGAAAAGGGTCATAGGACGCTCGAGGGGGGGCCCGGTACCCAGCTTTGTC | |||||||||
gi|88851921|gb|CI679479.1|CI679479 CI679479 Oryza sativa (japonica cultivar-group) 10 days after pollination pistil Oryza sativa AGCTCGTCATAGATGACCTC EST sequence (targeted fragment marked with yellow): GATCCTTCCCCAACTCGGCGTCGCGCCGCCTCAACCGAAGCAAGGAGCAAAGCGGGGATTCAGAACGGGAAGGAGAAGGTCCGGTTCGTCCGCTCTCGAGCTCAAGTGTCAGTTGAAGTGTTTTGAAAGTCATGGCGGAGCATTTGGCTTCAATATTTGGGACTGAGAAGGATAGGGTTAACTGCCCCTTTTACTTCAAGATTGGGGCTTGCCGTCATGGGGATCGTTGCTCCCGTCTGCACAACAGGCCAACTGTGTCGCCGACAATTGTGCTTGCTAACATGTATCAGCGCCCTGATATGATCACACCAGGAGTCGATGCTCAAGGCCAACCTATTGATCCTGAAAAGATGCAGGAGCACTTTGAGGATTTCTATGAGGATATCTATGAGGAGC | |||||||||
gi|87007846|gb|CI287690.1|CI287690 CI287690 Oryza sativa (japonica cultivar-group) etiolated shoot Oryza sativa Japonica Group c AGCTCGTCATAGATGACCTC EST sequence (targeted fragment marked with yellow): TTTGAAAGTCATGGCGGAGCATTTGGCTTCAATATTTGGGACTGAGAAGGATAGGGTTAACTGCCCCTTTTACTTCAAGATAGGGGCTTGCCGTCATGGGGATCGTTGCTCCCGTCTGCACAACAGGCCAACTGTGTCGCCGACAATTGTGCTTGCTAACATGTATCAGCGCCCTGATATGATCACACCAGGAGTCGATGCTCAAGGCCAACCTATTGATCCTGAAAAGATGCAGGAGCACTTTGAGGATTTCTATGAGGATATCTATGAGGAGCTG | |||||||||
gi|33682967|gb|CF311206.1|CF311206 ABF--06-F12.b1 ABF3-overexpressing transgenic rice plasmid cDNA library (ABF) Oryza sativa Ja AGCTCGTCATAGATGACCTC EST sequence (targeted fragment marked with yellow): ATTGCACTGTTCTTTAACCAGGGACAATGTTGCTGTGCTGGGCCTCGTACATTTGTGCATGAGCGTATCTATGATGAGTTCGTGGAGAAGGCCAAGGCTCGTGCTCTCAAGCGTGTGGTTGGTGATCCATTCAAGAATGGTGTTGAACAGGGCCCTCAGATTGATGACGAGCAATTCAACAAGATCTTGCGCTACATCAAGTATGGTGTTGACAGTGGAGCCAACCTTGTGACTGGTGGCGACAGATTAGGTGACAAAGGTTACTACATCCAGCCAACAATTTTCTCGGATGTACAGGATAACATGAGGATTGCTCAAGAAGAGATATTTGGCCCTGTGCAGTCCATTCTGAAGTTCAATGATCTGAACGAGGTCATCAAGAGGGCAAATGCAAGCCAGTACGGGCTGGCTGCTGGGGTCTTCACCAACAACCTGAACACGGCCAACACCCTGACCCGCGCGCTCAGGGTCGGGACCGTGTGGGTGAACTGTTTCGACGTCTTCGACGCCGCGATCCCGTTCGGCGGATACAAGCAGAGCGGCATCGGGAG | |||||||||