| mature miRNA: ATAGTACTAGGATGTGTCACA species: Oryza sativa database: miRNEST The numbers on the right side of the alignments show a score calculated for them. When calculating the score, a mismatch is given a score of 1, bulge: 2, and wobble: 0.5. |
| Predicted miRNA targets | |||||||||
gi|86481519|gb|CI124152.1|CI124152 CI124152 Oryza sativa (japonica cultivar-group) supermix Oryza sativa Japonica Group cDNA clo ATAGTACTAGGATGTGTCACA EST sequence (targeted fragment marked with yellow): TTCAATCACATCATCTCCAATTTCAACCAAAATCCAAACTTTGTGCTGAACTAAACACAGCCGTAAACGAACAGATATTAAACTGACAAAGCACTAGTACTATTGTTCTAGCACAAACTACTCCGGTATAGTTCTCCCGTGGACAAATACTCCCACCATCCCAAAGTATAACATATTTTGGGTGAATGAAATACATCCTAGTACTAAATCTGTTCAGATTCATAGTATTAAGATGTCTCATCCACCTAAAAACCATATACTTTGGGACGGAGGAAATATTTCGCAAGGGATATCCAATACAATGGGCATATGTGGAGTTACCAGTTAACTACAAGTGTAATACTGAGTTTGTTCAACTACTCCCTCCATCCCAAAATATAGCAAACTATTAAAACTGATGGAAAGCATACTAGTCCAAAGAATCTGGCTAGCCCCTTGTCCATAATCATTGGACTATATATCCATTCCAAGTTTGCTATATTTTGACAAGGAGGACATAGTTAACCTGGATATGTTGCCAAAACAACAATCGACAATCGGTGGCCAACTAACAGCCACGAATTTCGCATGGAACATTTGGAATCGACCACAGAGTTCTTT | |||||||||
gi|86873645|gb|CI316307.1|CI316307 CI316307 Oryza sativa (japonica cultivar-group) shoot Oryza sativa Japonica Group cDNA clone ATAGTACTAGGATGTGTCACA EST sequence (targeted fragment marked with yellow): AGATCAACTGTTAGGGGTCAAGATTAACCAGAAGATGATGATGATTTTGCCAGTAATTACCACTCCCTCCGTCCCATAAAAAACCACCACTCGATGCGACACATCCTAGTACTACGAATGTAGACATATTTCTATCCAGATTCGTTGTACTATAATGTGTCACATACAGAGCTAGATTCACTTTTTGGACGGAGGGAGTAGACATATCCATGGGGTCGTCGCGTATAGCGTGTACTTTTCCCAAGAGCGAGA | |||||||||
gi|88275118|gb|CI395722.1|CI395722 CI395722 Oryza sativa (japonica cultivar-group) seed Oryza sativa Japonica Group cDNA clone J ATAGTACTAGGATGT-GTCACA EST sequence (targeted fragment marked with yellow): GAATTCTACAAATACTTATATTTGATAAAAGAGAGAGTAGTACATATATTTTCCTACTGTGAGCATTTTTCAAATTTAATATATTTTGACGAATGATTCACATCTACTCCCTCCGCTCCAGATGTGACTACATCCTAGTACTACGAATCCGGATATACATGTCTAGATTTATAGTGCTATAATATGTTACATCATGTTCTAGATTTGTTTTTAATAGGACGGAGTATACTATATCCGACCGCTCGAAGAATTAGAGACATTCGTGCTTCATCTTGTGATGTAGCCAACGAAGTCATCCAA | |||||||||
gi|88693513|gb|CI737088.1|CI737088 CI737088 Oryza sativa (japonica cultivar-group) 1 nuclei stage pistil Oryza sativa Japonica G ATAGTACTAGGATGTGTCACA EST sequence (targeted fragment marked with yellow): TTTTTTTTTTAAATGTACATATGGGTTGAAAATTTTGCACATAATTTATATATCCAATCATACCAGGTACTCTCTCCATCCCATAAAAAACCAACCTAATACCGGATGTGATACATCCTAGTATTACGAATCTGGACATCCCTCCGTCCCTAAAAAGCTAACCTAGTAGACACATCCGNGTAACTAAGGGTTNGGGTTTTTTATGGGGGAAATTGGGGAGGAAGTAAGGAATAAGCACATTATTTTATTATTGTGATATTGTCACAGTGTGTTAAGAACAAACTGAGTTAAATTCGGTTAGTTTTCTTGTATGGAGATTGGCTCCAAAGAAAAACAAGAGGTGTGGATTGGATTTGGTTTCGCTGT | |||||||||
gi|88249879|gb|CI249728.1|CI249728 CI249728 Oryza sativa (japonica cultivar-group) Shoot and root of germinating seeds Oryza sat ATAGTACTAGGATGTGTCACA EST sequence (targeted fragment marked with yellow): TTTGGATGTAAAATATCCTAGTACTACGAAATCGGATGTGTCATATCCGATCAAAATCCCTTATATTTTGGAATTGAGGGAGTAGTTCTCAATCAGTATAGATAGTGGTGCGCAAACAATTCGATCAGAAATAGGGGAACTGCCCAGATGATGAAAGGTGAGAAATTCAACAGAGAAGTCTACCCAAGAGAAGCAAAAACTGTCAAAATTTCTCACCCGTCTTCGTCTGAAGTCCCCGGTCTCTAATCGAACGAACAATTAATAATAGAAAGAAAACTATACAGATAAACGCGTGCATGCGCTACTGAAAAACCTAATAAAATGCTGTGTCTGACCATAAGAAAATAATCCTAAAGAAATCTCCAGAATATTACTACACTCTCTAAGATCATCTCATCAGGTAACCTGCAAATACTACTAGCCTGACGCTCTCTCTCTCCGCGTTATTTTTGTACACATACTACTACATATATGCACAAATATAATGCAGCTATACACAGGCCCATCAACTGAATGATCATATGATCAGGACAGCCAAGAAGATGAAATGGTCAGGTCCAGGTTCAGATCAGTGGTCAGCATATTGCTCTCCTTCTTCGC | |||||||||
gi|88514917|gb|CI442571.1|CI442571 CI442571 Oryza sativa (japonica cultivar-group) callus 50ppm CuSO4 for 1 week Oryza sativa Ja ATAGTACTAGGATGTGTCACA EST sequence (targeted fragment marked with yellow): CCTACAAATACTTATATTTGATAACAGAGAGAGTAGTACATATATTTTCCTACTGTGAGCATTTTTCAAATTTAATATATTTTGACGAATGATTCAAATCTACTCCCTCCGTCCAGATGTGATACATCCTAGCACTACGAATCCGGATATACATGTCTAGATTTATAGTGCTATAATATGTTACATCATGTTCTAGATTTGTTTTTAATAGGACGGAGTATAGTATATCCGACCGCTCGAAGAATTAGAGACATTCCTGCTTCATCTTGTGATGTAGCCAACGAAGTCATCCAAGCCTTTCCGCGAGGACCCGCCGTCTGCCACAGACGCGCGGACGGCCTCGCCGAGCTCCTTTGCCCGCCGCCGTATTGTCATCCCTTTCTCAGGCAGCATCGCCTCCTCAATGACCTCCTGGATGGCC | |||||||||
gi|86862079|gb|CI330672.1|CI330672 CI330672 Oryza sativa (japonica cultivar-group) shoot Oryza sativa Japonica Group cDNA clone ATAGTACTAGGATGTGTCACA EST sequence (targeted fragment marked with yellow): CGCTGTTGAATAATTGATTGTATAGGAAACACATATAACAATGATATAAATAACAGCTGTACAATGGAAACTGCAAGTGTGTGTGTACACAACTTGGCGGATGAAACCTACTTCAATTCTTCCCCATTTTGAAACATACATTAATTCTCCTTTATATTGCCACCAAAAATTTTACAAAACCTATCCCTAATAATAACCAACCCATCACACTAAGTAGATCAACTGTTAGGGCTCAAGATTAACCAGAAGATGATGATGATTTTGCCAGTAATTACCACTCCCTCCGTCCCATAAAAAACAACACTCGATGCGACACATCCTAGTACTACGAATCTACACATATTTCTATCCAGATTCGTTGTACTATAATGTGTCAAATACAGAGCTAGATTCACTTTTTGGACGGAGGGAGTAGACCATATCATGGCGTCCTCGCCTACAGCGTGTACTTCTCCCAAG | |||||||||
gi|88528012|gb|CI456212.1|CI456212 CI456212 Oryza sativa (japonica cultivar-group) whole body 1mM ACC(1-aminocyclopropane-1-carb ATAGTACTAGGATGTGTCACA EST sequence (targeted fragment marked with yellow): GTTTGAAACATACATTAATTCTCCTTTATATTGCCACCAAAAATTTTACAAAACCTATCCCTAATAATAACCAAGCCATCACACTAAGTAGATCAACTGTTAGGGCTCAAGATTAACCAGAAGATGATGATGATTTTGCCCAGTAATTACCACTCCCTCCGTCCCATAAAAAACCAACACTCGATGCGACACATCCTAGTACTACGAATNTACACATATTTCTATCCAGATTCGTTGTACTATAATGTGTCACATACAGAGNTAGATTNACTTTTGGGACGGAGGGAGTAGACCATATCCATGGCCGTCGTCCCGTACAGCGTGTACTTCTCCCAAGACCGAGAGGAGGAACAACAAGGACCAGATGGTCAGCTACGACAACCAATGCCTCCTGTTCCGCGACCGAGTTCACT | |||||||||
gi|88503792|gb|CI431298.1|CI431298 CI431298 Oryza sativa (japonica cultivar-group) library (Kikuchi S) Oryza sativa Japonica Gro ATAGTACTAGGATGTGTCACA EST sequence (targeted fragment marked with yellow): AATCCGAATTCTACAAATACTTATATTCGATAACAGAGAGAGTAGTACATATATTTTCCTACTGTGAGCATTTTCCAAATTTAATATATTTTGACGAATGATTCAAATCTACTCCCTCCGCCCAGATGTGATACATCCTACTACTACGAATCCGGATATACATGTCTAGATTTATAGTGCTATAATATGTTACATCATGTCCTAGATTTGTTTTTAATAGGACGGAGTATAGTATATCCGACCGCTCGAAGAA | |||||||||
gi|29615816|gb|CB620828.1|CB620828 OSIIEa06E16.f OSIIEa Oryza sativa Indica Group cDNA clone OSIIEa06E16 5', mRNA sequence ATAGTACTAGGATGTGTCACA EST sequence (targeted fragment marked with yellow): CTTTTTTTGGCGGATGAAACCTACTTCAATTCTTCCCCATTTTGAAACATACATTAATTCTCCTTTATATTGCCACCAAAAATTTTACAAAACCTATCCCTAATAATAACCAAGCCATCACACTAAGTAGATCAACTGTTAGGGCTCAAGATTAACCAGAAGATGATGATGATTTTGGCAGTAATTATCACTCCCTCCATCCCATAAAAAACTAACACTCGATGCGACACATCCTAGTACTACGAATCTGGATATATTTCTGTTCAGATTCGTTGTACTATAATGTGTCACATCCAGAGCTGGATTCACTTTTTTTTTTTTTTTTTGGATGGAGGGAGTAAACCATATCCATGGCGTCGTCGCGTACAGCGTGTACTTCTCCCAAGAGCGAAAGGAGGAAAAAAAAGGAGAGATGGTCAGCTAGGACACCGAATGCCTCGTGTTCCGCGACGGCGTCGACCTCGTCTCCTCGCCGGGGCTCTCCGACGTGTCGGAACTGCTGTTCTCCCCGCTGCTTGCCTTGCCAAAACACAGCTTGCTCAGTATCTTCTTCGGGATTAGCCCGCCGCCGCCGCTCCCCTTTGCTGACGCCGACGACGGGGGCGGCTTCTTGCAGGCGGCCTGA | |||||||||
gi|88531879|gb|CI458397.1|CI458397 CI458397 Oryza sativa (japonica cultivar-group) whole body 1mM ACC(1-aminocyclopropane-1-carb ATAGTACTAGGATGTGTCACA EST sequence (targeted fragment marked with yellow): GTTTGAAACATACATTAATTCTCCTTTATATTGCCACCAAAAATTTTACAAAACCTATCCCTAATAATAACCAAGCCATCACACTAAGTAGATCAACTGTTAGGGCTCAAGATTAACCAGAAGATGATGATGATTTTGCCAGTAATTACCACTCCCTCCGTCCCATAAAAANACAACACTCGATGCGACACATCCTAGTACTACGAATCTAGACATATNTCTATCCAGATTCGTTGTACTATAATGTGTCACATACAGAGCTAGATTCACTTTTTGGACGGAGGGAGTAGACCATATCCATGGCGTCGTCGCGTACAGCGTGTACTTCTCCCAAGAGCGAGAGGAGGAAGAAAAAGGAGAGATGGTCAGCTAGGACACCGAATGCCTCGTGTTCCGCGACGGCGTCGACCTCGTCTCCTCGCCGGGGCTCTCGA | |||||||||
gi|88525419|gb|CI453422.1|CI453422 CI453422 Oryza sativa (japonica cultivar-group) whole body 1mM ACC(1-aminocyclopropane-1-carb ATAGTACTAGGATGTGTCACA EST sequence (targeted fragment marked with yellow): GTTTGAAACATACATTAATTCTCCTTTATATTGCCACCAAAAATTTTACAAAACCTATCCCTAATAATAACCAAGCCATCACACTAAGTAGATCAACTGTTAGGGCTCAAGATTAACCAGAAGATGATGATGATTTTGCCAGTAATTACCACTCCCTCCGTCCCATAAAAAACCAACACTCGATGCGAAACATCCTAGTACTACGAATCTAGACATATTTCTATCCAGATTCGTTGTACTATAATGTGTCACATACAGAGCTAGATTCACTTTTTGGACGGAGGGAGTAGACCATATCCATGGCGTCGTCGCGTACAGCGTGTACTTCTCCCAAGAGCGAGAGGAGGAAGAAGAAGGAGAGATGGTCAGCTAGGACACCGAATGCCTCGTGTTCCGNGACGGCGTCGACCTCGTCTCCTCGCCGGGGCTCTCCGACGTGTCGGAGCTGCTGTTCTNGCCGCT | |||||||||
gi|88558523|gb|CI489013.1|CI489013 CI489013 Oryza sativa (japonica cultivar-group) whole body 1mM ACC(1-aminocyclopropane-1-carb ATAGTACTAGGATGTGTCACA EST sequence (targeted fragment marked with yellow): CGTTTGAAACATACATTAATTCTCCTTTATATTGCCACCAAAAATTTTACAAAACCTATCCCTAATAATAACCAAGCCATCACACTAAGTAGATCAACTGTTAGGGCTCAAGATTAACCACAAGATGATGATGATTTTGCCACTAATTACCACTCCCTCCGTCCCATAAAAAACCAACANTCCATGCGACACATCCTACTACTACGAATCTACACATATTTCTATCCAGATTCGTTGTACTATAATGTGTCACATACAGAGCTAGATTCACTTTTCGGACGGAGGGAGTAAACCATATCCATGGCGTCGTCGNGTANAGCGTGTACTTCTCCCAAGAGCGACAGGAGGAAGAAAAA | |||||||||
gi|88457888|gb|CI542070.1|CI542070 CI542070 Oryza sativa (japonica cultivar-group) root of seedling 2ppm BAP(benzyl amino purine ATAGTACTAGGATGTGTCACA EST sequence (targeted fragment marked with yellow): GCACAAAGTAGTTGTTTGATACTCTCTCTGTCCCTAAATATAAGATATTTTGGTTGGATATGACGTATCCTAGTACTATAAATCTAGACAAATATGACCAGATCTGTAGTACTAGAATTCATCCCATCCATCCAAATTTTCAGAATATTTTGGGACGGAGGGAGAACCTGATAAGAAAATTACAATAAATTTAAAAGTATGTATCTAGATTTATTAGGGAGAAAGAAAATTAAGAAGGTGCCTATGAATTTTAATCAAAGGTATTTGTGAACATTATGTTAGACCTTAATTATGCTAAAATTTCTCCAAATCATGGAGGAATTTTATATCCTATGAAATTACTTTGAAGCAATGCTACATCTGAAAACTTTAATTTCATAGGAATGTTTTCCAATGGATTGAATTCCTC | |||||||||
gi|88850745|gb|CI095010.1|CI095010 CI095010 Oryza sativa (japonica cultivar-group) Panicles more than 5cm stage Oryza sativa Jap ATAGTACTAGGATGTGTCACA EST sequence (targeted fragment marked with yellow): TTTTTTTTTTTCAATCACATCATCTCCAATTTCAACCAAAATCCAAACTTGGTGCTGAACTAAACACAGCCGTAAACGGACAGATATTAAACTGACAAAGCACTAGTACTATTGTTCTAGCACAAACTACTCCGGTATAGTTCTCCCGTGGACAAATACTCCCACCATCCCAAAGTATAACATATTTTGGGTGAATGAAATACATCCTAGTACTAAATCTGTTCAGATTCATAGCATTAAGATGTCTCATCCACCTAAAAACCATATACTTTGGGACGGAGGAAATATTTCGCAAGGGATATCCAATACAATGGGCATATGTGGAGTTACCAGTTAACTACAAGTGTAATACTGAGTTTGTTCAACTACTCCCTCCATCCCAAAATATAGCAAACTATTAAAACTGATGGAAAGCATACTAGTCCAAAGAATCTGGCTAGCCCCTTGTCCATAATCATTGGACTATATATCCATTCCAAGTTTGCTATATTTTGACAAGGAGGAAATAGTTCACCTGGATATGTTGCCAAAACAACAATCGACAATCGGTGGC | |||||||||
gi|117237070|gb|CT861729.1|CT861729 CT861729 Oryza sativa (indica cultivar-group) cv. Guang Lu Ai 4 Oryza sativa Indica Group cD ATAGTACTAGGATGTGTCACA EST sequence (targeted fragment marked with yellow): GAACTACGTCGTGACTACAATGTCACCGGCGGTTTTGTTGTGAACCAGGTGAATGTTGATTCTACTGCTGAGACACTTGGCATTAGACGAGGAGACGTGATTGTTTTTCAGGATACCGATTCTTGTACTTCTCCTCAGTTGGAAAACTATCTTCTTTCTCTTGGCTGGGGATATTTGCAAGGGATACGCTTGACAGCAGATCTCAAGGTTGAGGTACACAACCTGATGGACTCGTATAGAGAAAGCATAACTTTCCCTCTACAGTTCTCTGATGCTTCCAGGCGGGTTGATTGATGATGATGATGTGGACTGGAGGTGTTGCAGAGGATTGAAGTCACCTAGAATACTATTCCCTCCGCCCCAAAAATAAGTTAACCTTATACGGGATGTGGCATATCCGAGTACTACGAATATAGACAACTATATGTCCAGGTTTGTAGTACTAGAATATGTCTTATCTTATACTATGTTAACCTATTTTGAGATAGAGGAAATAGTATGATGCAATGTACTCCTTGAATTTTGGGACGAGTCAGTTTGGCAAGGTAACAATTCCTTAGTGCCAGCGATGC | |||||||||
gi|88523834|gb|CI451695.1|CI451695 CI451695 Oryza sativa (japonica cultivar-group) whole body 1mM ACC(1-aminocyclopropane-1-carb ATAGTACTAGGATGTGTCACA EST sequence (targeted fragment marked with yellow): GTTTGAAACATACATTAATTCTCCTTTATATTGCCACCACAAATTTTACAAAACCTATCCCTAATAATAACCAAGCCATCACACTAAGTAGATCAACTGTTAGGGCTCAAGATTAACCAGAAGATGATGATGATTTCGCCAGCAATTACCACTCCCTCCGTCCCATAAAAAACCAANACTCGATGCGACANATCCTAGTACTACGAATCTACACATATTTCTATCCACATTCGTTGTACTATAATGTGTCACATACAGAGGCTAGATTCACTTTTCGGACGGAGGGAGTACACCATATCCATGGCGTCGCCGCGTACAGCGTGTACTTGTCCCAAGACCGAGAGGAGGAACAACAAGGACACATGGTCCACCACGACACCGAATGCCTAGCGTTCCGCGACGGCCTCGA | |||||||||
gi|86880689|gb|CI321080.1|CI321080 CI321080 Oryza sativa (japonica cultivar-group) shoot Oryza sativa Japonica Group cDNA clone ATAGTACTAGGATGTGTCACA EST sequence (targeted fragment marked with yellow): CGGTGTTGAATAATTGATTGTATAGGAAACACATATAACAATGATATAAATAAGAGCTGTACAATGGAAATGCAAGTGTGTGTGTACACAACTTGGCGGATGAAACCTACTTCAATTCTTCCCATTTTGAAACATACATTAATTCTCCTTTATATTGCCACCAAAAATTTTAAAAACCTATCCCTAATATAACAAAGCCATCACACTAAGTAGATCAACTGTTAGGGCTCAAGATTACCCAGAAGATGATGATGATTTTGCCAGTAATTACCACTCCCTCCGTCGCATAAAAAACCAAGACTCGATGTGACCCATCCTAGTAATAAGAATGTAGAGATATTTCTATCCA | |||||||||
gi|29637432|gb|CB642441.1|CB642441 OSJNEb02K02.r OSJNEb Oryza sativa Japonica Group cDNA clone OSJNEb02K02 3', mRNA sequence ATAGTACTAGGATGTGTCACA EST sequence (targeted fragment marked with yellow): GATAGGAGAGTTGAAAAATGAGCTAGTTTTGGTGGGAAGCTTCAACACAAAAACCTTGTGAGACTAGTGGGTGTTTGCCTTGAGGACGAGGAGAAGCTACTTGTGTATGAATACTTGCCCAATAGGAGCTTGGACACTATTCTTTTTGATCAAGATAAAAGCAAGGAATTGGACTGGGAGAAGAGATTCAGGATCATAAGTGAAATTGCTCGAGGGCTACAGTACCTGCACGAAGAATCTCGGTTGAAAATCATTCACCGGGATCTCAAAGCTAACAACATTCTACTAGATTCCGATTTAACCCCTAAGATTTCAGACTTTGGCTTGGCGAAGTTATTTGGAGGGGACCAGTCGCACATTGTCACAAATCGTGTAGCTGGGACATAGTAAGTGCCTTCTCAAATTCAATCCATTCATTCTGTTTTATCTTACTTTCTTTCTTTGCCAATCATGTCTCTGTCACTGAACTCGAGGCAAGATAGGTCAGACCAATTTTATTAAACCTTGAAACGATGTACTCCCTCGGTCTCATAAAAAACCAATTTAGTGTTGGATATGACACATCCTAGCACTACGAGTCTAAATCAGATTCGTAGTACTAAGGTGCTAGATTTTTTTTGGACGAAAGGAGTACTCTGGTGACGGGATGTTCCATTACAAGAGGCAAACCGGAATAGCCTCCGATTCCTCCGAAGTGGAACAATCTTGGTCAGCTCATCTCTACTATTGTAAAAATTGAAGATGTTTTTGTCGGT | |||||||||
gi|89183890|gb|CI046455.1|CI046455 CI046455 Oryza sativa (japonica cultivar-group) callus Oryza sativa Japonica Group cDNA clone ATAGTACTAGGATGTGTCACA EST sequence (targeted fragment marked with yellow): TTATATTTGATAACAGAGAGAGTAGTACATATATTTTCCTACTGGTGAGCATTTTTCAAATTTAATATATTTTGACGAATGATTCAAATCTACTCCCTCCGTCCAGATGTGATACATCCTAGTACTACGAATCCGGATATACATGTCTAGATTTATAGTGCTATAATATGTTACATCATGTTCTAGATTTGTTTTTAATAGGACGGAGTATAGTATATCCGACCGCTCGAAGAATTAGAGACATTCCTGCTTCATCTTGTGATGTAGCCAACGAAGTCATCCAAGCCTTTCCGCGAGGACCCGCCGTCTGCCACAGACGCGCGGACGGCCTCGCCGAGCTCCTTTGCCCGCCGCCGTATTGTCATCCCTTTCTCAGGCAGCATCGCCTCCTCAATGACCTCCTGGATGGCCTCCGCCGGGACCACCTCGCTGTGCTTCTCCCATGGCCTCACGAGGAGGC | |||||||||
gi|109712534|gb|CI105142.1|CI105142 CI105142 Oryza sativa (japonica cultivar-group) Panicles one day after flowering Oryza sativ ATAGTACTAGGATGTGTCACA EST sequence (targeted fragment marked with yellow): TCTTTTCGCTGTTGAATAATTGATTGTATAGGAAACACATATACAATGATATAAATAACAGCTGTACAATGGAAATGCAAGTGTGTGTGTACACAACTTGGCGGATGAAACCTACTTCAATTCTTCCCCATTTTGAAACATACATTAATTCTCCTTTATATTGCCACCAAAAATTTTACAAAACCTATCCCTAATAATAACCAAGCCATCACACTAAGTAGATCAACTGTTAGGGCTCAAGATTAACCAGAAGATGATGATGATTTTGCCAGTAATTACCACTCCCTCCGTCCCATAAAAAACCAACACTCGATGCGACACATCCTAGTACTACGAATCTAGACATATTTCTATCCAGATTCGTTGTACTATAATGTGTCACATACAGAGCTAGATTCACTTTTTGGACGGAGGGAGTAGACCATATCCATGGCGTCGTCGCGTACAGCGTGTACTTCTCCCAAGAGCGAGAGGAGGAAGAAGAAGGAGAGATGGTCAGC | |||||||||
gi|88538830|gb|CI467891.1|CI467891 CI467891 Oryza sativa (japonica cultivar-group) 30 days after pollination pistil Oryza sativa ATAGTACTAGGATGTGTCACA EST sequence (targeted fragment marked with yellow): ACATGTGACGATGTTTGTACCTAATTATTTTGTACACCAAAGTTTAAACCACTGAATGCGCTCAGAAAGCTTATCAATATATGGCAGAACAGATAAGGCCCGCCATGTATATTGATCACAGTAAGGGAACAAGTAGACACTCCCTCCGTCTCATAATAAGTTAATTTAGTACGAGATGTGGCATATCCTAGTACTACGATTTTGGACAAAGACATGTCTAGATTCGTAGTTCTAAGATATGTCACGTCCCGTAATAGAGTAACTTATTTTCTGACGAAGGTAGTATATGTTAAGAAAAGCATATACATGCACATAAATTGCTCCAGAATAATAAGACTAATGGTAATACATCAATTATAGATAATGAACATTGAAACCAAAATTCTGCACATGCACTTTC | |||||||||
gi|88967014|gb|CI379898.1|CI379898 CI379898 Oryza sativa (japonica cultivar-group) callus Oryza sativa Japonica Group cDNA clone ATAGTACTAGGATGTGTCACA EST sequence (targeted fragment marked with yellow): CAGACATCACCAAGTAAATGGATGAATATATGCTGTAGATCCAAAAAAATTGCAGTACAACAGTAACGTTTTCACATATGTTGGGTCTCACAAATATCTATTATGTTGGATAGGGAATGAACAAATTCATCAAAACCTTCAAAAAAATTATTGATGTCAGCGTCACTAGTTAACTTGACAAATCCAGTGGAATAAATGACAAGAAACAAGTATGTTCAAGAGTCAAAACAAAAACATGAACAACTCCCAAAATAAACAAACACAGGATGTGACGCATCCTAGTAATACTAATTTGAACTGACGTCACATCTTATACTAGATTTGTTTTTTTGGGACAGAGGGAGTACATTATAACAAACAATTCAGTTAAAAGAGAAGCAAAGTAAGGCATTACGTCAAAAATATGACAACAGATAATTGCCACACGATACATACAAGGATTTA | |||||||||
gi|88479035|gb|CI416306.1|CI416306 CI416306 Oryza sativa (japonica cultivar-group) germinating seeds Oryza sativa Japonica Group ATAGTACTAGGATGTGTCACA EST sequence (targeted fragment marked with yellow): CAAATTTAATATATTTTGACGAATGATTCAAATCTACTCCCTCCGTCCAGATGTGATACATCCTACTACTACGAATCCGGATATACATGTCTAGATTTATAGTGCTATAATATGTTACATCATGTTCTAGATTTGTTTTTAATAGGACGGAGTATAGTATATCCGACCGCTCGAAGAATTAGAGACATTCCTGCTTCATCTTGTGATGTAGCCAACGAAGTCATCCAAGCCTTTCCGCGAGGACCCGCCGTCTGCCACAGACGCGCGGACGGCCTCGCCGAGCTCCTTTGCCCGCCGCCGTATTGTCATCCCTTTCTCAGGCAGCATCGCCTTCTCAATGACCTCCTGGATGGCCTCCGCCGGGACCACCTCGCTGTGCTTCTCCCATGGCCCTCAGAGGAGGCCAGCCTTGAGGTATTTGCACACCAGCC | |||||||||
gi|86498919|gb|CI141552.1|CI141552 CI141552 Oryza sativa (japonica cultivar-group) mixed shoot (Normalized Library) Oryza sativa ATAGTACTAGGATGTGTCACA EST sequence (targeted fragment marked with yellow): TTTGCGTACTCTATCCGTCCCATAAAAAACTAGATGTGATACATCCTAGTACTACAAATCAGTACATACATATATCTAGATTTATCGTACTAGAATATATCATATCTGGTCCTAGATTCGGTTTTTTATGGGACGGTGGGAGTATCGATGGATTAATTCCATGGCGGTCGGTCTGGACGAGATCATCCTCCTTTCTGCTTGAAGGAGGAGTACATCTGGACAATGGTGGAGACGAAGGTGACGAAGGCGACGAACTCGGCGACCACCGCCCATGGCACCGTGAAGTAGTTGCGCTTCACGTCCGCCCACATCATGAACAGCGGGTGCCGGCTCCTCTCCCGGAGCTCCACCACCATCCCTCCCAGGTAGCTCCGCTCCAGCTCCACCTCGCCGCTCGCCGCCCCGACCTGCCGGAACAGCCTCACCACCTCCTCCTTGCCCTCGCCGCCGCCGTTCCCGTGCACCACCGCCACCACCTCCGCCGCCGCCAGCGCCCCGGCGTCCTCCGCCGACTGCACCATCTTCGCCATGAACGACACGTACGCCGACACGTCGCGCGCCTCCGCCTTCGCCGCCGACTGCTCGAACGCCATCAGGTTCAGCA | |||||||||
gi|86890667|gb|CI303917.1|CI303917 CI303917 Oryza sativa (japonica cultivar-group) cold treated callus Oryza sativa Japonica Gro ATAGTACTAGGATGTGTCACA EST sequence (targeted fragment marked with yellow): AGATATTTGACTCGTGTTGAGCCGGCGGTCCAACCGGTTGAGCCATTCAAACCGTGAACCGAGGGCTTCACCGGTTCCACGTCCGGTCCGGTCCTAATAACTTTGACTGGACGTGACATATCCTAGTACTATGAATCTGGATATACCTCTGTCCAGATTCATTGTACTAGAATATATCACGTCTAGTCTTAGGTTCGTTTTTTTGGACGGAGGGAGTTGAGAAGATCAACCCCCCCANCCCACCCCACCCCAAACACACACACTGTGTTGCGCTGCTGCCACTCTGCACCTCGCAGCGCTGAACGGGATGAATCGGA | |||||||||
gi|86489481|gb|CI132114.1|CI132114 CI132114 Oryza sativa (japonica cultivar-group) Panicles less than 5cm stage and Panicles two ATAGTACTAGGATGTGTCACA EST sequence (targeted fragment marked with yellow): TTTTTTTTTTTTTTTTTTTTTTTATGGCAGAACAGATTAGGCCCGCCATGTATATTGATCACAGTAAGGGAACAAGTAGACACTCCCTCCGTCTCATAATAAGTTAATTTAGTACGAGATGTGGCATATCCTAGTACTACGATTTTGGACAAAGGCATGTCTAGATTCGTAGTTCTAAGATATGTCACGTCCCGTAATAGAGTAACTTATTTTCTGACGAAGGTAGTATATGTTAAGAAAAGCATATACATGCACATTAATTGCTCCAGAATAATAAGACTAATGGTAATACATCAATTATAGATTATGAACATTGAAACCAAAATTCTGCACATGCACTTTCCTCTGTTATTCAGTTATATCAAAGCAGAGTTTAGCTTCATCCCAGGGACCATTGATCTCAAACTTGTATTCCTGAATTCTTATTAGCCAGTAAGGGCAAACAATTGAGATAAAAACAAGCAGTGCCAGCAGTAGGATGAAGAACATGTGATG | |||||||||
gi|88551085|gb|CI481111.1|CI481111 CI481111 Oryza sativa (japonica cultivar-group) whole body 1mM ACC(1-aminocyclopropane-1-carb ATAGTACTAGGATGTGTCACA EST sequence (targeted fragment marked with yellow): GTTTGAAACATACATTAATTCTCCTTTATATTGCCACCAAAAATTTTACAAAACCTATCCCTAATAATAACCAAGCCATCACACTAAGTAGATCAACTGTTAGGGCTCAAGATTAACCAGAAGATGATGATGATTTTGCCAGTAATTACCACTCCNCTCCGTCCATAAAAAACCAACACTCGATGCGACACATCCTAGTACTACGAATCTAGACATATTTCTATCCAGATTCGTTGTACTATAATGTGTCACATACAGAGCTAGATTCACTTTTTGGACGGAGGGAGTAGACCATATCCATGGCGTCGTCGCGTACAGCGTGTACTTCTCCCAAGAGCGAGAGGAGGAAGAAGAAGGAGAGATGGTCAGCTAGGACACCGAATGCCTCGTGTTCCGCGACGGCGT | |||||||||
gi|88447943|gb|CI538946.1|CI538946 CI538946 Oryza sativa (japonica cultivar-group) library (Kikuchi S) Oryza sativa Japonica Gro ATAGTACTAGGATG-TGTCACA EST sequence (targeted fragment marked with yellow): CTACAAATACTTATATTTGATAACAGAGAGAGTAGTACATATATTTTCCTACTGTGAGCATTTTCCAAATTTAATATATTTTGACGAATGATTCAAATCTACCTCCCTCCGTCCCAGATGTGATANCATCCTAGTACTACGAAATCCGGAATATACATTGTCTAGAATTAATAGTGGCTATNAATATGTTTACATTCATGTTCCTACAATTGGGTTTTNACTAGGGACGGAGTATACTATATCCGACCGCTCGAAGAATTAGAGAAATTCCTGCTTCATCTTGTGATGTACCCAACGAAGTCATCCAAGCCTTTCCGNGAGGAACCCGCGTCTGCCACAGACGCGCGGACGGNCTGCCGAGCTCATTTGCCCGCCGCCGAA | |||||||||
gi|55410882|gb|CV723258.1|CV723258 root--03-A01.g1 Rice root lambda phage cDNA library (root) Oryza sativa Japonica Group cDNA c ATAGTACTAGGATGTGTCACA EST sequence (targeted fragment marked with yellow): GCACGAGGCCTCGTGCCGAATTCGGCACGAGGTGCTGCTGCTGCTGCTGCTGCTGCTGTCCAATTCCTGGAATTAACTTCTCTTCTCGTTCTTTTGTTAACAAAACTTGTTCCTAGAATCAATGCTAGTTTCTTTCTGAAAATGATGCCTCCAGCAACTTTGCTTTGCCTTCAGAGTTCGTAGCGGTTATCATAGGTTCCTTTTGCACAGAACAGAATGATTAGGGAAACACTAGAGCCTTCAGTTCAGTTTAGTTTAGTTTATTACTCTTTCCATCCGAAAATATAAGATGTTAGGACTGGATGGGAGACATCCTATTACTATGAATTTGAACATGATGTTTAGATTCACAGTGCTATGATGTGCTCCATCTGATCCTAGTACCTTATATTTTGGGACGGGGGAGTACTACACTAGAGCCTTTTAGTTTAGTTTATTTTTGAAAAGCTAATCACAGTGCACAAAAAACTGAACCTCTCCGGTTGC | |||||||||
gi|117222088|gb|CT861480.1|CT861480 CT861480 Oryza sativa (indica cultivar-group) cv. Guang Lu Ai 4 Oryza sativa Indica Group cD ATAGTACTAGGATGTGTCACA EST sequence (targeted fragment marked with yellow): TTCCAGTTAGCACCACAAGATAGTGTGCTAGACGACCTGAGTTCGAAGCCTCATCCCTTCCTCCCCTAATATTCTCTGGGTTTGAAGCCTTATCCCTTCCTTCCCTAATATTTGTGTCTTTTCCCACAAAGAACATATTTTTGAATTTCTGTATCTAACGTTTAACATTCTGTCTTATTTTTTAAAAAAAAATATGATTTTTTTAAAGTTACTTAGTCTTATTTATGTTTTATTATCTAATAAAAATAAAGTACTAATTATAATTTTTTAAAATAAGATGAAGAGTCAAACGTTATATAAAAAACTAAAAGATGTTCTTCTTATGTAACAAAAGGAGTAGTAGCTATATAGGTAAGTAGTCTTCATCAGTTTAAAATTAATTAACCTCATTTTGAGGGTACTCTCACTTTTCCTCCCTTCCAAAGATGACTGTAGCTACTAGATCTCTGTGGATGTGTGCATTCATTTTGAGAATTGATTGATTCATTCAGACTAGCTTTGCCAAAGCCTCCAACAAATAATATATTGATAATAAATGTAATATTGTGCAACGTACGATTTGAGAGGCAGGAGATGGACAATACAGTATGCATCAATGAATAGATTGATACTCTCTTCGTCTCATAGAAAATCAACCTAGTACTGGATATGACACATCCTAATACTAAAAGAATGGGTCATAGCCGATTCTACATTTATTTTTTTATGGGAACGGAAAAAGGGATACTTCCATACGGGTAAGGAAAATGCGGAAACAAGGTTAACCTTTCAAAATTTGGAGTCGGGTCGAATCGCTTAACCCCCCTTCCCCCTGGCCAAAAAATTCTTTGAATTTATCCCCTAAGTTAGGGGGGTACCCCTCCCTTCCCTTCCGTTCCAGTGGCCCCTGGGAGAGCCTCTGGTCTTTTTAACTTCCTCCCCGGTCCCCGGCCACCCCCGGTAACTCCCTTTCCCGTCCCTTTG | |||||||||
gi|88452611|gb|CI558272.1|CI558272 CI558272 Oryza sativa (japonica cultivar-group) root of seedling 0.1M NaCl for 3 days Oryza s ATAGTACTAGGATGTGTCACA EST sequence (targeted fragment marked with yellow): GAGATCAATAAAGCTTCCATTATATAAAAAAATATCCCTCCGTGGAAAAATAATATAAGGAATTCTGGTTGAATGTGACATATCCTAATACTATAAATCTGGACAAACTCTTTGTCAAACCTATTCAGATTCATAGTACTGGAATATGTCCAATCAAACTAAAATCCATTATATTTTAGAACGGATGAAGTATAACACAGTGAGTACGGTTCTCTGCATCATGATCCCAGCATGGCAGAGAGCAGCGTGAAGCAAAATCAAGGAGAAGAAATGCAAAGGGAGTATCATAGCAGCAACCCAGGCACCAGAATTCGGCACCCATTATCTCGGCAAACAATTTACATTATAATGGACGTCAGATTCTCGTGTCACACAGATNAAAGAAATATCACTAGAAAC | |||||||||
gi|88247299|gb|CI247148.1|CI247148 CI247148 Oryza sativa (japonica cultivar-group) Shoot and root of germinating seeds Oryza sat ATAGTACTAGGATGTGTCACA EST sequence (targeted fragment marked with yellow): TTTTTTTTTTTTTTTTTTTTTTTTCTGCAATATGGTAATTCTTCATGTTAACTTTCCCTCTGACATACACAGTGCGCCCTTACTTTAAATAAAGTACATGAGTCTAAAAAAAAGCAGAGCCATTTGGGCCAATATTTCTACAACTGAATAACAAAGCATTTTAGAACCATCTAGAAGAGAAGTGAGTAAATCTATGATTTGACGTATGCCTCCTTAGCAATGGAGCGAAGGAAGCACAAAAGTTGTTTCTTTGCTCCCAAAAGCTTCATGGTAGATTCCTCTTCATGTTCATTTTCTATATTATCTTGGACCATGTGGACTGTCCTCACGAGCTTCCGCAGTTCCTGTTAACATAACATCAGTTAATTTCTTCAACTAATATATACTCCCTCCATTCTCCAAAATATAAGGGATTTTGGGTTGATGTGACATATCCTAGTACTATGAATCTGGACAGGTTCGCTGTACAGATTTGTAGTGTTAGAATGTGTCACATCCATCTAGAATCCCTTATATTTTGGGACAGATAGAGTATATAGTTTGGATGGTACATATATAAGGTTGAGCATTCAATGTTTAACATGAATGCAATAGGGCTTATTAA | |||||||||
gi|117232344|gb|CT860068.1|CT860068 CT860068 Oryza sativa (indica cultivar-group) cv. Guang Lu Ai 4 Oryza sativa Indica Group cD ATAGTACTAGGATGTGTCACA EST sequence (targeted fragment marked with yellow): CCCAATTCCTCAATCGCTCAAGCCGCCGCCGCGGCGAACCCTAGCCTCGCCACCGCCGCGAACCCTAGCGTCGCGTTGCCTCGCCGCCGCTGCGAGCCGTCGAACCCTAAGCCTCGCCTCCGTGTCCACCCGCCGGCCTCGACGCCACCAAGAAGGTGCCGAGCTCGGGGGGTTGTACGTTCGCCGCGCTCCGGCGGAGGCCGTCTGCGTCGTGGGGGAGGTAAGCATCTCTGCCTCGATCGGCGACAGATCCTCTCATGCTCGCGTTAAGATTACGCGTCCCGATCCGTATATTGGTCAATCTGATGCGTATCGGCGATCCATATTTTTCTTTTTTTCTCTCACTTCAGCAGCATATTAAGTATTGATAAAACTTGATTTCCTGCTTTGATATGCAAGAGCCTACTCCCTCGGTCCCATAAAAAACCAACCTAGCACCGGAATATGCAAGAGCCTGCTATGACATATCCTAGTACTATAAATATGTCCTAGTACTGAAATATACTCCATCCGTTAAAAAAAAACCAACCTAGATGAAGATAGGACACCAGCTAGAACAATCTTAGGACGGAGAAAGTACTACCTTATTGCTTATCTTATTTCATACTATCACCATTTGGAGTGAGTGCCATTTGGCTGTGTTCGGATTCTAGTGATGGGAACTAATCTCTCCCGCACGGAAAACGGGAGCAGTCCATTAGCGCGTGATTAATAAAGTATTAGCTAATTTATTTTTAAAAATAGATTAATTTGATTTTTTAAGCAACTTTCATATGAAAACTTTAAAAAAACGCATCGTTTAATAGTTTGGAAAAACGGGCGCGCGGAAAAACGAAAAAAGGGGGTGGGAAACATGGGATGCAAACCGGGGAAGCCCTAAAAAGCGGGGCCCGATAGGCTGGCCTAGGGGGGGCTGGAAAAATATTCCCCACGCATTTTTTATTCTTTGGGGG | |||||||||