| mature miRNA: ATGAATGTAGGCAATGCTAAC species: Oryza sativa database: miRNEST The numbers on the right side of the alignments show a score calculated for them. When calculating the score, a mismatch is given a score of 1, bulge: 2, and wobble: 0.5. |
| Predicted miRNA targets | |||||||||
gi|29624659|gb|CB629670.1|CB629670 OSIIEb06B16.r OSIIEb Oryza sativa Indica Group cDNA clone OSIIEb06B16 3', mRNA sequence ATGAATGTAGGCAATGCTAAC EST sequence (targeted fragment marked with yellow): TGAGCCATGACTTCAGGCTGATCAACCAAGTGGCGCAGGAGATATGGGTGTGCGAAAAGCAGGCGGTGACCAGGTGGGAAGGTGACATCATGGAGTTCAAGGAGCACCTGAGGAGCAAGGCCGGAGTGGACGATTGAGTTGAGTTGAGTTGAGTAGTTTTGATCTTGCTGCCTGGCCCGGAGAGGAGATACCATCACTCTGCTAGTTACTAGTATTTCTTCGGCTGTTACTAAACTATACTGCCCAGCCTAACGGGGACGACGACTGCATCATCATCTCTTGATCTCTCTCTCTTAGTTAAGTTGGATGCTTGTCACGGATGTTTGTACCTGATCTCCATCAACTACATCTGATGCTATAGCCCATATGGTACCACTACTGTGTTTATTATCTATATTCGTCTTGTTGCAAGCTTGGTAGTAACTATATATACTTGACGCTCTTGCTGCTCTTCCATTTGCAGCAGATGTACCGTCCTCTTCTTGGGGTCTCTGGAGAATGAGGAAACAGCAAGAGCCAGCCAGCATAGCATGTATGTATGTATAGTGTAATTAGCTGGTTTGTTGGCGGTGCACATGCATAAGATATACTTCCTCCGTTTTATATTATAAGACTATCTAGTATTGCCCACATTCATATATATATATATGTCTAGATTCATTAGCATCTATATGAATGTGGGCAATGATAGAAAGTCTTATAATATGAAACGGAGGGAGTATTATCTTGGTTTGCACTTGCATGATCACCTGCTGTAGTTATTATTATCAGTGACCAAGTTCCCCTAGCTAGCAGTAGCACTCCATGAAAAGATATCTACATGGAGCTGTACCACCCCCACGATATTATATATGAGATTAAAGTTAAACTCTCGAGGGGGGGCCCGGTACCCAGCTTTGTCCC | |||||||||
gi|88696174|gb|CI739749.1|CI739749 CI739749 Oryza sativa (japonica cultivar-group) library (Kikuchi S) Oryza sativa Japonica Gro ATGAATGTAGGCAATGCTAAC EST sequence (targeted fragment marked with yellow): AATTTTAAATTGACTTCTACTAGTTACTTCCTCTGTTTCAGGTTATAAGACTTCCTAGCATTGCCCACATTCATATGCTAGAAAGTCTTATAACCTGAAATGGTGGTAGTATATAATAAAATAATAAATTTCAAAATAGTAAATTTGACTGCTACTAATATATTACTCCCTCCGTCCCATCATATAGATGATTTTGGAGGGATATGACATATTCTACATTACATCCGACAAACAGCCATGCCATTAGATAGATCCGCTCTGACTTATAGGATGAGATCTGCTTGGTCTTGCTTAAGGCGATTGAGAGGAAGAAGAGGGAATTCTTGCGAAAAAAAGAATGAATCTCTTTATCTATAGGGAACA | |||||||||
gi|88443842|gb|CI552387.1|CI552387 CI552387 Oryza sativa (japonica cultivar-group) root of seedling 2ppm BAP(benzyl amino purine ATGAATGTAGGCAATGCTAAC EST sequence (targeted fragment marked with yellow): ATCCAGAAATTTAGATTTATTTATTTAGGATAAAGAAAATATAAGATACTGCCTCCATTTCATATTATTACCTCCGTTTCATATTATAAAACTTTCTAGCATTGCCCACATTCATATAGTTCTTAATGGATCTAGGCACACATATATATTTAGATTCATTACCATATATATGAATGTGAGTCTGCTAGAAAGTCTTATAATATGAAACGAACGAAGCAAGAAAGGAGGAAAATATAGTATACAAAATAATACTATAATTCTCTATCTTAAAACAAAAGCAAGCACACGCACTACTACGTCATTTTAGCTAAAGTATTTTACTTCAATAATTCAAGACAACTCAAACTTAGTTGGCACACATGTACTCCACCCCCTATCACTAGAGTTGTTTTCTTTTTTGTACAAGATCATCC | |||||||||
gi|88984050|gb|CI723612.1|CI723612 CI723612 Oryza sativa (japonica cultivar-group) library (Kikuchi S) Oryza sativa Japonica Gro ATGAATGTAGGCAATGCTAAC EST sequence (targeted fragment marked with yellow): TTGGCTTTAAACTAATGAGTAAGGAAAACAAAGCGTTGCGGTGAGAGCCGCTCGCGGTGCGGGACTCAAACCCTGCACGGCAATTTTTGCGAGGGGAAGAGGCTCGCGCGGGTATTGACACTGCTTACTTTTGCAGGACTTGCCTGTGTGGGCCTCCCTACCCACAAAATACCAAATCTAAATTTAGCTATAGTTAATTAAATAGAACTCTTTTTAAAAAAATTCAAATTTGATTTGTAATAAATTATAGTAATATTTATAATAAAAACAAATATTGTATTAAAATATGTCTAATATAAAATAAAATCAAATTGTAGTACTCCGATTTACTGTGAGTTATTTTAGCATTCCCTATATTCGTATTACATT | |||||||||
gi|88908127|gb|CI090723.1|CI090723 CI090723 Oryza sativa (japonica cultivar-group) Cd treated callus Oryza sativa Japonica Group ATGAATGTAGGCAATGCTAAC EST sequence (targeted fragment marked with yellow): TTTTTTTTTGCATGAATTGCTCTAGGATCTCGTATCACTCGCATTTTCTGTCACACATGGCTAAATAATTACATGAATAATGATCAAGCCGACTATAAGCTGAGTTGCACCATCATCTGCAATTTCTCCTGTGCAGATTTCAACCATATATACTCCCCCCGTTTCACAATGTAAGTCATTCTAGCATTTCCTATATTCATATTGACGTTTATAAATCTAGACATATATATCTATATAGATTCATTAACATCATTATAAATATGGGAAATGCTATGATGACTTACATTGTGAAACGGAGGAAGTACAACTGAAGGCGGCCAAAAGGAAAAAAAAAACTAGCTGTATGTACTACTGTAAATTACAAACGAGCCTAGTCAATGCCATTTGCCAATATGCGCTTATAATCAGCATCACAAGCCAGTGACTTCATCCCTTGGAAGACTGTGCTACGTGTAAAGATCCAGAGGGTGGGGCAAAACTTGTATTGCCGATNAACCAGTAGAGAACCCACTTCAAGTTGCACAGCATG | |||||||||
gi|117249239|gb|CT863006.1|CT863006 CT863006 Oryza sativa (indica cultivar-group) cv. Guang Lu Ai 4 Oryza sativa Indica Group cD ATGAATGTAGGCAATGCTAAC EST sequence (targeted fragment marked with yellow): AAAAAATAAAAAAACAGACAAGGGAAGGAAACCCTCGCCACCACGCGCCGCCGCCGCCGCCGCCGCCGCCGCCGCCCGCCGCGCTACCACCTGTTGCTCGTACGATCGGATTCAAATTGTCGCTTCTTTCTTCTTCCACAGCACAGGACGGGGTGTAGAAGAAGAAGAAGAAGAGCATCAAGAGGATGGGTTCACTGCGGCGGGTTGTGCACCTGGTGACCGCATTGAACGGCAGCGCCAACCTCCGCCACATCGACACGTCGCGTTTCTTCTCCCGCCGGCCGCCGCCGCCGTTCAGCCCGTCGTCCATGGCGGTGGTGACGGAGGAATCCTCCTTGCCGGAGCTGACCAACGTGTGGATGGAGCTGTCAGTGCCGAGGGAATGGATCCCGGTCGAGGCCTTCCTTGTGCACCTTGGCTCTAGCAGGTTCTTCGTGGCCAGATTCTTCCAAGAGCTAGTCGAGGTGCGCTGCGACTTCTCGCAGCGGTTCGACAGGTTCGCTGTCTTCACCGGCGTTGAGCTGGAGCGCACCTCCCGTGGTGAGCTCCGGATGATCAAGCACAAGTCGGAGCGTTACAGCATCGCTCACAAAGTCCTCTGCCATAGTGTTCTTTGATTTCACAACGTCCTCATCGTACATACTTCCTCCGTTTTATATTATAAGACTTTCTAGCATTGCCCACATTCATATATATGTTAATGAATCTAGATATATATGCGTGCCTACATTCATTAACATCTATATGAATGTGGGTAATGCTAGAATGACTTACATTGTGATATATATGTCTAGAATGACTTACATTGTGAAACGGAGGGAGTATCATTGTATTGAGTCATATAAAGTTATAAATTGTCTTGGCCCTATAAGCTT | |||||||||
gi|33815200|gb|CF333455.1|CF333455 JMT--02-F18.b1 AtJMT-overexpressing transgenic rice plasmid cDNA library (JMT) Oryza sativa J ATGAATGTAGGCAATGCTAAC EST sequence (targeted fragment marked with yellow): AGCTTCCCCGTCTCACCTCCTCCCCGTCGGCCGCCGCCTCCGCCGCATCCGCCTCCGCCTCCGCCTTATTGCTCACTTCGCTCCGGCGACGGAGAGGCCGGCCGGCAGCTTGGTTGCGACAATCGAATTGAGTGCAAGAGAATACAAAAAATTCGCGTCTCGTCCCGGCCTTAGTGAAGAGGGCATGAGGTTCCTGGGCTGGTACCTCAAGATCGCGGCCGGCGGCGCGGCCATAGGCGCTGCCATGGAGCTGTTCATGATCCACACCGGCTTCTATGAGAAGGTGACTGTGTTGGAGTCAGAGAAAAGAGCTTGGGAAACCAGCCCAGAGGCTCAAGCCATGAGAGAAGCCCTGAATCCATGGAGGAAGCATGATGACCAAGAGAAAAGATAGCCCTAGACTCATTGCCACCCTTCAATTGTAAGCCCTTCATGAGGTAATTTGTTGGATGTACTAGTACTTCCTCCGTTTCATGTTAGCATTGCCTACATTCATATATATGTTAATGAATATAGACATATATGTGTGCTTAGATTTATTAACATCTATATGAATGTGGGCAATGCTAGAAAGTCCTGTAACCTGAAACGGAGGTAGTAGCATTTTTGCAGTATTTGTACCTCTCTCGAACTTCTGGAT | |||||||||
gi|66922749|gb|CX109597.1|CX109597 EI001A05 A normalized whole-life-cycle cDNA library of rice Oryza sativa Indica Group cDNA cl ATGAATGTAGGCAATGCTAAC EST sequence (targeted fragment marked with yellow): TTTTTGAAAAAATGCTGAAACGACGCTATTTTACTACTCCATCCGTTTCACAATGTTAGTCATTTTAGCATTACCCACATTCATATTGATGTTAATGAATCTATCTATTGATAGCATCAATATGAATGTGGAAAATGCTAGAATGACTTACATTGTGAAACTGAGGGAGTAGTATCTTTGGTCCTAGCTCAGCTAAGAAAATGTGCGTAGAAAGAAGAAACTGTGCAATCACACGAGCTGAGGATTGGGCCATTTTGTTGGTCCAATCGTAATTTGTACGTGTAGACCAATATTCAAAAGTGCATTTTCGTATA | |||||||||
gi|86822388|gb|CI357948.1|CI357948 CI357948 Oryza sativa (japonica cultivar-group) flower Oryza sativa Japonica Group cDNA clone ATGAATGTAGGCAATGCTAAC EST sequence (targeted fragment marked with yellow): AATCCACATAAATGTTACTTCCTCCGTTTCATATTATAAGATTTTCTAGCATTGCCCACATTCATATATATGTAAATGAATCTAGACAGCATTTATATGAATGTGGGTAATGCTAGAAAGTCTTATAACATGAAAGGGAGGTAGTATCTCATATTATCTATCTCAAAACCAAGTGTATTTAATACAGCATTGAGAATATCTAGAGGAGGTATCAAACTCTCTCACGGGCCAGGGCAAAAAAATGTTCTACACCTCACACTACAACCTTATATTAACTATTAGCAACCCAGCAAAGGACTACATTTCCACTTCTGAAAAAAACTCTGAAAAAAGGAAGATGCGGATGGATTGTACAAGCTATTATAAGTGGGAATCATTTTGATTGTTGAAAGACTAGTGGCTAACAAGAAAATGACAACATGGAGATTTCCTACTTCAGGAA | |||||||||
gi|58688532|gb|CK077219.1|CK077219 81262rsicen_7826.y1 Oryza sativa cv. LYP9 booting whole plant cDNA library Oryza sativa Indic ATGAATGTAGGCAATGCTAAC EST sequence (targeted fragment marked with yellow): ACTAGTGGATCCCCGGGCTGCAGGCTTGGTACATGTGGCGCGGAAGATGCCTAAAAATGCCCATGCACATTTTATGTTGGGTTTGATGTACCAAAGGCTTGGTCAGCCACAGAAGGCAATAGCGGCATATGAGAAGTCATCTGAGATATTGTTACAAGATGAAGAAGAAGTTCGAAGGCCTGATTTGCTCTCATCAGTGAGGATACACCATGCTCAGTGCATTTTGCAAACAAGTATGGGTGACACTTTTGATGAAGAGCTTGAATCTGGTGAACTAGATGAAATCCTTGTTAAAATGAAGAGTTCAGTTGAATCTGACCCCAGACAGGCAGCTGTTTGGAATATCCTTGGTTTGGTTCTTCTTCGTAGTGGTCAGCTTCAGAGTGCTATCTCAGTTTTATCTTCTCTGACGGTTGTTGCTCCAGATTACTTGGACTCTCTTGCGAATCTTGGTGTTGCCTACATTCAAAGTGGGAATCTAGAACTGGCCACAAAATGCTTTCAAGAACTTGTTATAAAAGATCAAAACCACCCAGCTGCTCTGGTGAACTATGCAGCTCTCCTTCTCTGTAAATATGGATCTTTTGCTGCAGGGTCAGGTGGTAATGTTAGTGCAGGCTCTTGTCTGCATCAGAA | |||||||||
gi|86870857|gb|CI326688.1|CI326688 CI326688 Oryza sativa (japonica cultivar-group) shoot Oryza sativa Japonica Group cDNA clone ATGAATGTAGGCAATGCTAAC EST sequence (targeted fragment marked with yellow): ATAAGATACTGGCTCCATTTCATATTATTACCTCCGTTTCATATTATAAAACTTTCTAGCATTGCCCACATTCATATAGTTATTAATGGATCTAGGGACACATATATATTTAGATTCATTACCATATATATGAATGTGAGTGTGGTAGAAAGTGTTATAATATGAAAGGGAAGGAAGCACGAAAGGAGGAAAATATAGTATACAAAATAATACTATAATTCTCTATCTTAAAACAAAAGCAAGCACCCGCACTACTAGGTGATTTTAGGTAAAGGTATTTTACTTCAATACTTCAGGAGACCTCAAACTTAGTTGGCCCACATGTACTCCACCCCCTATCACTAGAGTTGTTTTGTTTTGTGTACAACATGTGCTAACATTCCAGACGGACTTAAAGAAACAGCAGAACCTTCCCGGGAAAATTTCACTGAGAACGGTGGATTCGGGCACGTATAATAATCATCACCATCATCGTGTTATCCACCCTAAGGGAAAACGGGAATTT | |||||||||
gi|29673311|gb|CB669586.1|CB669586 OSJNEe02D01.f OSJNEe Oryza sativa Japonica Group cDNA clone OSJNEe02D01 5', mRNA sequence ATGAATGTAGGCAATGCTAAC EST sequence (targeted fragment marked with yellow): GTTAAAGTTAATTGCTCTCTATTTCTCAACGTTTAGGCTCAATTTTCTGTAGATAAATTCTTTCATTTATTTATGCTAGCTTACGTTGTTCCAATATATGTCTATTTATCCTTTTCTTTTACAGTCATATCCCATGATTATCTGATCAATGCACTTCGCTTTGTTAAGAATATGATTGCTATTATACTATTTACTACTTCCTTCGTTTCATATTATAAGACTTTCTGGCATTGCCTACATTCATTAACATCTATATGAATATGGGCAATGCTAGAAAGTCTTATAACCTGAAACGGAGGTAGTAGTTAAAGTATATGCCTTAGAAACTAGATTTCTGTAGTCATAGAGTATCATAAGCAGCTGCATCCTGACTCAATTGTATATTCATCTAGGTACTTAAGTACCTCAGTTCTTCTGGATATATTGATAAAGCTTAACTCATAATCGAAGGCAGCCTTATACACTAAATGCCATTTCTCTCTTACCCTGTAGTTCTGCAAGAATATTGTTCTAGCAGGAGTTGGCAGTTTATCCTTGATGGATGATCATTTAGTCACAGAGGATGATCTCAATGCAAATTTCTTAATTCCTCATGATGAGAGCATATATGGTGGTAGATCACGAGCTGAGGTTTGCTGTGAGTCCCTGAAAGATTTCAATCCAATGGTCCGAGTTGCAGTCGAAAAGGGTGAGCCTAGTCTGGTTTTCTTCATTGGTTTGGGTGTCAGAATTAGAAGTACATAAAGTAGGATGCCTTCTTGCATTCTTGAATTGCTCTCGTCCTAATGGTTAATCTTTGAAT | |||||||||
gi|117228042|gb|CT859578.1|CT859578 CT859578 Oryza sativa (indica cultivar-group) cv. Guang Lu Ai 4 Oryza sativa Indica Group cD ATGAATGTAGGCAATGCTAAC EST sequence (targeted fragment marked with yellow): GAGATGTGTTGTTTTGTTCACTTGTGTTTCTTCTCTCTCCCTCTCTCTCTCGTCATTTGGACTTGTCGCCGTGCCAACCTTGTTTGGACTGCTCCTGCCACCGTTTCTTCCTTCTTCCCTCTCCCCTATCGTGGTGATGCCTTGCTTTCTCCTGGTGGTAGGAGTAGTATATTATAGTACTCCCATTCCCTCCAGTTTATTGTTTTGCCTATCGATCTCTTGTTGTTCTTCATCGTCCTCTATATAGAACGAACGAGTGCAATGCATTCTGTTCACATCGTCTGAGAGTTTGTGATCAGACAAGAACAGAAAAAAAAAAAGAGGGATTATTTTGCCTCTTCCTGTGCCGCCATGTTGGGTTCTTGTGCCCCGACGACGGCCGGGCCGCCGCCGGACGAGGCGACCACGCCGGAGCCGTTCCGGTCGCTGCAGATCGCCACCGCCTCCGCCGGCTCGGCGAAGAAGAAGCGACGGCCAGCCGGCACGCCAGGTAATTAAGCTAAAGCGCCGAGACGCGCCGCCCCAGATATCATCATGCGAGTACATCCAATTATTATTGGTAGTAGATGGCCAGATAGATTTGTTGCATGGCAATTGTGTGGCGCGGCAATGGCCATGGTAAAAATGGAAATGGATGGGTTCGTTCTTCATTGGTTGCTGCTGGTGAATGAAACCAACGGCGCTTGGCGGCCGCCCGCGACGCCCCAGTTAGTTGCAAACCCAGATCCAATTAAGATTCTCTTTCCTTCTCATCTATGCTGTATGAAGTCAAAACAGGCCGGCCCTTCAAAATCCACGCCACCCCGCTTCAGCCTAGAGGAACAATCCTGCCAGAGGCAACCATACTACTCAAAAAGCCTGCTCACGGAGCATCCCTCACAGTTGCGATGGCATTACCTACATTGATACACGTCACCAATGTATCTGATACAAACTGATGATAAGCATACTCAATATAAGAGAAAAAAAGTCTTGTACATAACAACCATAGACTGAACACCTACGTGGCGACGTCTTCAAGACATCACCTTGCTTCTCGCCTACCATCTCTTTAAATTTACATCACCATTGCACCCTCGGCCGTATTCAATGAGTTGATTCTACTTTCTTGTCGACTTCAAACCCTACTCACCACACACAACGACAGCTTATGCAATCCAACACCCCTAACACACACACATAGACTACTGCACGGACAACAATCCCCACGCCACCAATAATCCTCATACCACATCCCGCACAAAACGCCAAGCACGCGA | |||||||||
gi|86602069|gb|CI260539.1|CI260539 CI260539 Oryza sativa (japonica cultivar-group) Shoot and root of germinating seeds Oryza sat ATGAATGTAGGCAATGCTAAC EST sequence (targeted fragment marked with yellow): GGCCAAATGAACAAAACAATATTCACTTCTTTTTTGCCAATGAACTAAAGAGGGAGCATCTATTTTCCAATTTCCTGGTTTGAAAATACAGAGTATTACAAGAAATTGCATAATTTCAAAATACTCCAGCTAACTCATCTTCACCAACCAAATAATTGATTGTTTACATGCCTTATCATAGATACTCCCTCCGTTTTATATTATAAGACTTTTTAGCATTGCCGACATTCATACGTATGCTAATGAGTCTAGACATATATATACTCCCTCCGTTTCATATTACAAGACTTTCTAGTATTTCCCACATTTATATAGATGTTAATGAATCTAAACATGTATATATGTCTAGATTCATTAATATATATATTAATGTCGGTAATGCTAAAAAGTCTTACAATATGAAACGGAGGAAATAGGTACGATGAGGACGTTGTGAAATCAAAGAACACTATGGCAGAGGACTTTGTGAGCGATGCTGTAACGCTCCGACTTGTGCTTGATCATCCGGAGCTCACCACGGGAGGTGCGCTCCAGCTCAACGCCGGTGAAG | |||||||||
gi|88481545|gb|CI418816.1|CI418816 CI418816 Oryza sativa (japonica cultivar-group) leaf of seedling 50ppm CuSO4 for 3 days Oryza ATGAATGTAGGCAATGCTAAC EST sequence (targeted fragment marked with yellow): CTAGCATTGCCCACATTCATTTAGATATTAATGAATCTAGACATATGTATGTATTTAGATTCATACCACACATATATACTGAGACCACTGAGGACAGTAATAGGCAAATCGGGGACGATCATCAATGCAAAAAAAAATACATGAGGATGAAACGAATCGCTACATGAGAAAAAAAAAGAAAAAAAAAGAAAGAACAGAACAAACAGACTGGATTAGTATTTTGGCTTGTGAACCTGCTGCGTTGTCCGGTCATACCAGGGGATGGCAAGCGAGAAGCATCGCCAATGTGACGACGATCGCGGCATGAGCCTGCATCCTGCTCGCGAGCGACGGCGCCTGAGCTGTTCTTGCAGGCGGCAGCGGCGGCTCCGCCACGTCCGAGCCCGTNAGGAGGGG | |||||||||
gi|87016573|gb|CI273783.1|CI273783 CI273783 Oryza sativa (japonica cultivar-group) supermix Oryza sativa Japonica Group cDNA clo ATGAATGTAGGCAATGCTAAC EST sequence (targeted fragment marked with yellow): TTTTTTTTTTTTTTTTTGAGAGAGAAATACAGCATCCGAATTTCAGATACTACTTACTACTTCCTCCGTTTTACAATATAAGACTTTCTAGCATTGCCCACATTCATTTAGATATTAATGAATCTAGACATATGTATGTATTTAGATTCATACCACACATATTTACTGAGACCACTGAGGACAGTAATAGGCAAATCGGGGACGATCATCAATGCAAAAAAAAATACATGAGGATGAAACGAATCGCTACATGAGAAAAAAAAAGAAAAAAAAAAAGAAAGAACAGAACAAACAGACTGGATTAGTATTTTGGCTTGTGAACCTGCTGCGTTGTCCGGTCATACCAGGGGATGGCAAGCGAGAAGCATCGCCAATGTGACGACGATCGCGGCATGAGCCTGCATCCTGCTCGCGAGCGACGGCGCCTGAGCTGTTCTTGCAGGCGGCAGCGGCGGCTCCGCCACGTCCGAGCCCGTCAGGAGGGGCATCGGCGACATCGCCGGCGGCTGCGCCGGCTTACTGATGATCTGCAGCAGGTCACCCGAGCGAGCCGGGGCCATGAAGCTCGGCGTGTTGTTCCCCATGTGCATACAGGTGTTCAATTGGTATCTCCGTGCTGTTGCCGGGAAATCTGTGATCACGCCATTCACTCCAGAACCCTGAACATACGCATTGATCTGCGCGGTCGCGTCC | |||||||||
gi|88208223|gb|CI208072.1|CI208072 CI208072 Oryza sativa (japonica cultivar-group) same as Lib 33(supermix) Oryza sativa Japonic ATGAATGTAGGCAATGCTAAC EST sequence (targeted fragment marked with yellow): TTTGCAGTTCCAAAAGCATATATTGGTACTACTCCCTCCGTTTCATATTATAAGACTTTCTAGCATTGCCCACATTCATATATACGTTAATGAATCTAGACATGAATATATGGACAATGCTAGAAAGTCTTATAATACGAAAAGGAGGAAGTACATAAATATTATTCTACACGGATATCATGACTCACAAAAGTGGCCATTTACAGGAACCGAAATTAAAAGAAAAGTTAACTAACTATGCATTCAGGTGAACCTCAAAGCATACGTATTTAGTGTTGTCCATTTCTTCTGAATCATTTTTTCTTAGCACTTTCTTCTGCTCTAGTAAAAGCATCCATGATCATATCGGTAGCCCAATCCTTGACATCCTCCAGCCGTACTGGTTCCCCAGTTCTTATACGGGCATGCGGACGAGCTAACTTCGATTCAAAAGGGGTCCTTGGCCTGACTTCTTGGATCTCATCCCATTCTTCACGCGTAAGCATCCTTACTTTTCCTTGATCAGGGTGGCTATTCTTTATCTTGCGTTCTCCTCTTTCTTGATCTGCTG | |||||||||
gi|88841105|gb|CI001067.1|CI001067 CI001067 Oryza sativa (japonica cultivar-group) etiolated shoot Oryza sativa Japonica Group c ATGAATGTAGGCAATGCTAAC EST sequence (targeted fragment marked with yellow): GAAACATACGTTCGGCCTGATTATATTATGTGCACAGTTCAATTACTGTCTTACTTGAGCCAAGAGCAAGAGATGGCTTGATTTGGATCCAATGGTGCTTGATAATACACATATAACATACTTCCTCTGTTTTACAATGTAAGTCATTCTAGCATTTCCTATATTCATATTGATGTTAATGAATCTAGACATATGAATGTGAGAATAATATATCTAGATTCATTAACATCAATATGAATGTGAGAAATGCTAAAATGACTTACATTGTGAAACAGAGGGAGTACAAGCCTGTTGATTCTGAAAATAACAGTAAAGGCATCAGATAGAAATGGACCAAACCACCACAAAATTATGAAAAATATGTGTTGATGCATACAAGTCTGACTGGCTTCTCGACAAGGTTACAATAATCACAAATGACATGATCACGCACGCTCTTCAGGGTATAAACCAAAGTGTGAATCAACATGGGATTTACAGATGATGCAATTTTGACAGTACTGTACAGAAACGGGCAATTAGTTCAGAGAGACATAACCATCTTGGATCTTAACATGACAGTCAACCATCTA | |||||||||
gi|33659362|gb|CF281975.1|CF281975 14ETL--09-E09.b1 Rice etiolated leaf plasmid cDNA library (14ETL) Oryza sativa Japonica Group ATGAATGTAGGCAATGCTAAC EST sequence (targeted fragment marked with yellow): ACTTCCCTTTCTTCTCCTCCTGCTTCCCCGTCTCACCTCCTCCTCGTCGGCCGCCGCCTCCGCCGCATCCGCCTCCGCCTCCGCCTTATTGCTCACTTCGCTCCGGCGACGGAAAGGCCGGCCGGCAGCTTGGTTGCGACAATCGAATTGAGTGCAAGAGAATACAAAAAATTCGCGTCTCGTCCCGGCCTTAGTGAAGAGGGCATGAGGTTCCTGGGCTGGTGCCTCAAGACNGNCGGCCGGCAGCGCGGCCATAGGCGCTGCCTGGGAGCTGTTCATGATCCACACCGGCTTCTATGAGAAGGTGACTGTGTTGGAGTCAGAGAAAAGAGCTTGGGAAACCAGCCCAGAGGCTCAAGCCATGAGAGAAGCCCTGAATCCATGGAGGAAGCATGATGACCAAGAGAAAAGATAGCCCTAGACTCATTGCCACCCTTCAATTGTAAGCCCTTCATGAGGTAATTTNGTTGGATGTACTAGTACTCCCTCCGTTTCATGTTAGCATTGCCTACATTCATATATATGTTAATGAATATAGACATATATGTGCGCTTAGATTTATTAACATCTATATGAATGTGGGCA | |||||||||
gi|29627202|gb|CB632213.1|CB632213 OSIIEb10F05.r OSIIEb Oryza sativa Indica Group cDNA clone OSIIEb10F05 3', mRNA sequence ATGAATGTAGGCAATGCTAAC EST sequence (targeted fragment marked with yellow): GCAAACAAAGAATGGCATGAATCAGCAGAAAACCAATTGGATAAAACGTACCAGCACCAAGTGGAAGAGGAGCAAGATGCTTCTATATTTAATGATCAACCTATCACTTTGGAACATGATGTCGAGAAGGCTAAAACCATGAAGAATGACGACCTTATATTTACTGACGAAGCAACACAGAAACAAGATGCTTTAAGATTGAAGAGGAAGAACGAGGATGATGAAGTTCATGCGGATAAAGTGATGGAGAAGAGTGGCAGATCTCCTGTTCATGTGAAAAAGAAGGTAAAAGGCCCGAAACCTGCTTCGGTTGGACAAGCATCACTGCTTTCCTATTTTGCAAAGAAGTAGTTTCTCAAGTAATGTTAGTGCTGACTCTGTCCCTCGGAAGTACATCACCTTATTTAGCAGCTACTACCTTATTTTTCTCTCTTTTTTGAGGTAAATTAGAGGCTATCTTCAATGTCAAGTAGTGTGTCTAATATTTTGCTAATGATGTATTCCCTTCGATTCACAATGTAAGTCATTTTAGCATTTCCTATATTCATATTGATGTTAATGAATCTAGACATATATATCTATTTAGATTCATTAACATCAATATGAATGTGAAAAATAGTAGAATGACTTATATATTGTGAAACGGAGGAAGTAAGCAGGTACTGCCTCTGGCTGTCAACCTGAGCGTTGCATGGGTCATATTTAATATTAAATAGAAAAGATGCATGTGCGTGACAATGGGATAAAAATGTTTGAACTT | |||||||||
gi|109712118|gb|CI104726.1|CI104726 CI104726 Oryza sativa (japonica cultivar-group) Panicles one day after flowering Oryza sativ ATGAATGTAGGCAATGCTAAC EST sequence (targeted fragment marked with yellow): TTTTTAATTTCAAAATACTCCAGCTAACTCATCTTCACCAACCAAATAATTGATTGTTTACATGCCTTATCATAGATACTCCCTCCGTTTTATATTATAAGACTTTTTAGCATTGCCGACATTCATACGTATGCTAATGAATCTAGACATATATATACTCCCTCCGTTTCATATTACAAGACTTTCTAGTATTTCCCACATTTATATAGATGTTAATGAATCTAAACATGTATATATGTCTAGATTCATTAATATATATATTAATGTCGGTAATGCTAAAAAGTCTTACAATATGAAACGGAGGAAATAGGTACGATGAGGACGTTGTGAAATCAAAGAACACTATGGCAGAGGACTTTGTGAGCGATGCTGTAACGCTCCGACTTGTGCTTGATCATCCGGAGCTCACCACGGGAGGTGCGCTCCAGCTCAACGCCGGTGAAGACAGCGAACCTGTCGAACCGCTGCGAGAAGTCGCAGCGCACCTCGACTAGCTCTTG | |||||||||
gi|87017991|gb|CI275805.1|CI275805 CI275805 Oryza sativa (japonica cultivar-group) mixed callus (Normalized Library) Oryza sativ ATGAATGTAGGCAATGCTAAC EST sequence (targeted fragment marked with yellow): TTTTTTTTTTTTTTTTTTTTTTTTTTTTTGGCCAATGAACTAAAGAGGGAGCATCTATTTGCCAATTTCCTGGTTTGAAAATACAGAGTATTACAAGAAATTGCATAATTTCAAAATACTCCAGCTAACTCATCTTCACCAACCAAATAATTGATTGTTTACATGCCTTATCATAGATACTCCCTCCGTTTTATATTATAAGACTTTTTAGCATTGCCGACATTCATACGTATGCTAATGAATCTAAACATATATATACTCCCTCCGTTTCATATTACAAGACTTTCTAGTATTTCCCACATTTATATAGATGTTAATGAATCTAAACATGTATATATGTCTAGATTCATTAATATATATATTAATGTCGGTAATGCTAAAAAGTCTTACAATATGAAACGGAGGAAATAGGTACGATGAGGACGTTGTGAAATCAAAGAACACTATGGCAGAGGACTTTGTGAGCGATGCTGTAACGCTCCGACTTGTGCTTGATCATC | |||||||||
gi|88725119|gb|CI748378.1|CI748378 CI748378 Oryza sativa (japonica cultivar-group) library (Kikuchi S) Oryza sativa Japonica Gro ATGAATGTAGGCAATGCTAAC EST sequence (targeted fragment marked with yellow): AATTTTAAATTGACTTCTACTAGTTACTTCCTCTGTTTCAGGTTATAAGACTTTCTAGCATTGCCCACATTCATATGCTAGAAAGTCTTATAACCTGAAATGGTGGTAGTATATAATAAAATAATAAATTTTAAAATAGTAAATTTGACTGCTACTAATATATTACTCCCTCCGTCCCATCATATAGATGATTTTGGAGGGATATGACATATTCTAGATTACATCCGACAAACAGCCATGCCATTAGATAGATCCGCTCTGAGTTATAGGATGAGATCTGCTTGGTCTTGTTAAGGCGATTGAGAGGAAGAAGAGGGAATTTTTGCGAAAAAAAGAATGAATCTCTTTATTTATAGGGA | |||||||||
gi|86875366|gb|CI322440.1|CI322440 CI322440 Oryza sativa (japonica cultivar-group) shoot Oryza sativa Japonica Group cDNA clone ATGAATGTAGGCAATGCTAAC EST sequence (targeted fragment marked with yellow): GCTGAAGACATTTCATCTCTTATAAATCTTAATGTTGATTGGATATGGTGTTGATTGCACCATCACAAACTCACCTAACCAGAGCTGCATGAATTGCTCTAGGATCTCGTATCACTCGCATTTTCTGTCACACATGGCTAAATAATTACATGAATAATGATCAAGCCGACTATAAGCTGAGTTGCACCATCATCTGCAATTTTTCCTGTGCAGATTTCAACCATATATACTCCCCCCGTTTCACAATGTAAGTCATTCTAGCATTTCCTATATTCATATTGAGGTTAATAAATCT | |||||||||
gi|89193001|gb|CI050299.1|CI050299 CI050299 Oryza sativa (japonica cultivar-group) cold treated callus Oryza sativa Japonica Gro ATGAATGTAGGCAATGCTAAC EST sequence (targeted fragment marked with yellow): TCCTCTATATATCTTAATGTTGATTGGATATGCTGTTGATTGCACCATCACAAACTCACCTAACCAGAGTTGCATGAATTGCTCTAGGATCTCGTATCACTCGCATTTTCTGTCACACATGGCTAAATAATTACATGAATAATGATCAAGCCGACTATAAGCTGAGTTGCACCATCATCTGCAATTTCTCCTGTGCAGATTTCAACCATATATACTCCCCCCGTTTCACAATGTAAGTCATTCTAGCATTTCCTATATTCATATTGACGTTAATAAATCTAGACATATATATCTATATAGATTCATTAACATCATTATAAATATGGGAAATGCTATGATGACTTACATTGTGAAACGGAGGAAGTACAACTGAAGGCGGCCAAAAGGAAAAAAAAAACTAGCTGTATGTACTACTGTAAATTACAAACGAGCCTAGTCAATGCCATTTGCCAATATGCGCTTATAATCAGCATCACAAGCCAGTGACTTCATCCCTTGGAAGACTGTGCTACGTGTAAAGATCCAGAGGGTGGGGCAAAACTTGTATTGCCGATAAACCAGTAGAGAACCCACTTCAAGTTGCACAG | |||||||||
gi|117236476|gb|CT848901.1|CT848901 CT848901 Oryza sativa (indica cultivar-group) cv. Guang Lu Ai 4 Oryza sativa Indica Group cD ATGAATGTAGGCAATGCTAAC EST sequence (targeted fragment marked with yellow): ACAGTTACAGGCTGGAGCCCCACGTTCTTTTCCCAATTTCAAACGCCGTTTTTTTTTCAATTTAAGCTAAATATAAGTAGGCCTCAGTGCCAGTCGAGACGACGTGAAAATCATTTTTCCAAAGTCTCTCTCGTCTCTCCCGCGTCGCGAGCAAACCTTCCCCCCACCACCGCGGCATGGCCGGCGAGATGCCTGACGCCGACGGCAAGCCCCGCTCGGCCTCCTCTGGGTTCCAGCCGTCGGCGCCGCCGCAGCCGCAGGCGCAGCAGTACCAGTACGGCACGTTCGGGGCCCCGTCCTCCGCCCCCGGTGAGGTCCCGCAGCCGGCGATCGGGTTCCCCCAGCCGGCCCCGCCGCCGGGGCTCCGGCACTACCCGCAGCCGCCCCCGCCGTCCTACGCGGTCTACCCTCCGCTTCCCCCGCAGACGTACCCGGCCGCCGCGCCGTACTACGCCCAGGGCTACCAGGCCGTGCAAGGTTACATTCCCGTTGTTGAAGGAAGGCCTGTGAGAATGCGACGCCTTCCATTTTGCGGCCTTGGCATGGGCTGGTTCCTGTTTATCATTGGCTTCTTCCTCGCTGCCATTCCATGGTATATTGGAGCTTTTGTTTTGATATGCGTCCGAGTACATGATTACAGGGAGAAACCAGGATATGTTGCTTGCACTATTGCGGCTTCGCTTGCTGCCATTGCTATCCTGCTTGGTGTCACAAGAGGAGAAGAGATTTGGTGAACCGGCTTACCGTAATGTAAATGCCTATTCTTCCCCTACTTTGTGGAGTTCTGGGTTGTACATGTATACATAGAATTGACAGTGTGGGACGGCGGAATTGTATTCTCATATTTGCTTTTTGATATATATTTCTAGTGTATTGATGTATTCTCGTAGATCATATTATATTCTCGTAGGTATTGATGTATTCGTCATATTTATTACTACCTCTATTTCAGGTTATTAGACTTTTTATCATTGCCTACATTCATATAGATGTTAAATAATTTAGGCACATATATGTCTAGATTCATAAACATATATAT | |||||||||
gi|88489324|gb|CI426596.1|CI426596 CI426596 Oryza sativa (japonica cultivar-group) leaf of seedling 10mM H2O2 (10min), 24hr afte ATGAATGTAGGCAATGCTAAC EST sequence (targeted fragment marked with yellow): CAGAATGATTTTTTAAATAAATACTTCCTCCGCTTTGTATTATAAGACTTTCTAGCATTGCCCACATTCATATATATGTTAATGAATCTAGACATATATGTGCCTAAATTATCTACCATCTATATAAATGTAGGCAATGATAGAAAGTCTTATAACCTGAAATAGAGGTAGTAATAACATATGACGAATANATCAATACCTACGACAATATAATATGATCTACGAGAATACATCAATACACTACAAATATATATCAAAAAGCAAATATGAGAATACAATCTCGCCGCCCCACACTGTCATTCCTATGTATACATGTACAACCCAGAACTCCACAAAGTAGGGGAAGAATAGGCATCTACATTANGGTAAGCCGGTTCACCAAATCTCTTCTCCTCTTGTGACA | |||||||||
gi|88459793|gb|CI522053.1|CI522053 CI522053 Oryza sativa (japonica cultivar-group) 4 nuclei stage anther Oryza sativa Japonica G ATGAATGTAGGCAATGCTAAC EST sequence (targeted fragment marked with yellow): GGGGGGGGGGGTGTTCATAGAAAATGCTGGATTTTCCTTCTCTGCTCAGTAAATTCGCTGTATATCATACTATGTTGATACTCCTATTTTCTTTTCTTGGTTTCAGGTACTCCTGCCAATGTTTCCTAAACTACACCATCATTTGAGAAGAAATCTAATGCAGTCGCGGAGCTGAAAACCACACGTAAGTTTTGCCGCGCTTTTGTTTTGGAGAAATTATACCCTTGCACTTATTTAGTATCACACCAGTGAATGATCATCTGAAATGTTCATTTTGGACCATTGTTTATAGGCTTATAGCTTTTTTTTTTGGTTCGACAATTGTTTATACTCCCTCCGTTTCACAATGTAAGTCATTTTAGTATTTCCCACATTCATATTGATGTTAATTAATCTAGACATATATGGCTAGAATGACTTACAT | |||||||||
gi|29668084|gb|CB664359.1|CB664359 OSJNEd10A12.r OSJNEd Oryza sativa Japonica Group cDNA clone OSJNEd10A12 3', mRNA sequence ATGAATGTAGGCAATGCTAAC EST sequence (targeted fragment marked with yellow): ACGGCGGACGCGGACGAGGGCGGCTGCGTCGGTCCCGGTGAACGCGGACGAGGGCGGCAGCGGCGGAGGTCGTGGACGAGGACGGCGGCGGTTGGCAGAGGGAGGCGGCAGTGGTCGAGGGCGCGGTGGACGCGGACGAGGTCGGCGGCGGTGACGGACGAGGGCGGTGGCAGCGGTTGAGGACGACGGCGGACGCGGACACGGACGAAGGCAGCAGCGTCGGTCACGGTGAACACAGACGAGGGCGGCAAGCCGGCAACGGCGGCGATCGTGGCATATGATGTGATAAAATGTTTTGTGATTTATTGGTTTGCAGCTCTGATGTACAGATGAGTAGCAGATGACTCGCCGTCTCTCCATCGCATATCAAGAATGCCTATTGCCTGTGATGCCTTCTATGTTTCGGTTCTGAGCAGCAGTTGAACAAATAAGGAGGCAAGATTCTAAGGATTCAAACTCATTGCGTTTAGTTAAGCAACACAACAAGGTACACTGTGCCATAATTTTGCAGATTGAGCAGTCACGAATTGAGCATATGCTGATCGCTGTACGGATCATGCTACTTCCTCTATTTCATATTATAAGACTTTCTAGCATTGCCCACATTCATATATATGTTAATAAATCTAGACATATATATGTACCTAGATTCATTAACATCTATATGAATGTGGACAATGTTAGAAAGTCTTATAACCTGAAATGGAGGTAGTATAAAATAATGTGTAAACAACGCATGCCAATGGCGCCTACAGCCTAACTTGTGTTAAGGTCATGTTCAGCAATAATCTATTAATCATGCGTTTCAAAAAG | |||||||||
gi|88724494|gb|CI747753.1|CI747753 CI747753 Oryza sativa (japonica cultivar-group) 4 nuclei stage anther Oryza sativa Japonica G ATGAATGTAGGCAATGCTAAC EST sequence (targeted fragment marked with yellow): GGTAATCTCCTTTGTCTTTCCTGGATATGCCTCACTATCCATTGGATTATAACCTTCTCCAAATCATATACTCCCTCCGTTTCAGAATGTAAGTCATTCTAGCATTTCCTACATTCATATTGATGCTAATGAATCTAGATAAATATATCTAACGGAGGAAGTAATATAGATGGTAGTTATATGAGATAATTATTTTGGTCGAACAGCCGCTTATAATTAAGCTACAATTTATTTTAGAACTTATTATCTATATTAAGTTTTCGTGTGTGATCTATATATATTCGCGTCTTCACTTTTTCACTGTTAAAATAGAAGTATAAATGTTACCGCAAATTTTTTTTTTCCAT | |||||||||
gi|33682955|gb|CF311194.1|CF311194 ABF--06-F06.b1 ABF3-overexpressing transgenic rice plasmid cDNA library (ABF) Oryza sativa Ja ATGAATGTAGGCAATGCTAAC EST sequence (targeted fragment marked with yellow): TTTTTTTTTTTTTTTTTGCCAATGAACTAAAGAGGGAGCATCTATTTTCCAATTTCCTGTTTGAAAATACAGAGTATTACAAGAAATTGCATAATTTCAAAATACTCCAGCTAACTCATCTTCACCAACCAAATAATTGATTGTTTACATGCCTTATCATAGATACTCCCTCCGTTTTATATTATAAGACTTTTTAGCATTGCCGACATTCATACGTATGCTAATGAATCTAGGCATATATATACTCCCTCCGTTTCATATTACAAGACTTTCTAGTATTTCCCACATTTATATAGATGTTAATGAATCTAAACATGTATATATGTCTAGATTCATTAATATATATATTAATGTCGGTAATGCTAAAAAGTCTTACAATATGAAACGGAGGAAATAGGTACGATGAGGACGTTGTGAAATCAAAGAACACTATGGCAGAGGACTTTGTGAGCGATGCTGTAACGCTCCGACTTGTGCTTGATCATCCGGAGCTCACCACGGGAGGTGCGCTCCAGCTCAACGCCGGTGAAGACAGCGAACCTGTCG | |||||||||
gi|33815202|gb|CF333456.1|CF333456 JMT--02-F18.g1 AtJMT-overexpressing transgenic rice plasmid cDNA library (JMT) Oryza sativa J ATGAATGTAGGCAATGCTAAC EST sequence (targeted fragment marked with yellow): TTTTTTTTTTTTTTTTAAAATAGAACTGTTCAACCTCTCCAAGCCTATAATTTCCTTGTTATCTAGTATGAAACATCAGTGCATCACATAAAGATGGCATGCCATCTGTGTATGTGTGTTGAACCAAAAAAAATATATATCAAGACATACGGGTGTATTCTTCTAAAGTATTTGTAGAAGCTACCACCTACCATCCAGAAGTTCGAGAGAGGTACAAATACTGCAAAAATGCTACTACCTCCGTTTCAGGTTACAGGACTTTCTAGCATTGCCCACATTCATATAGATGTTAATAAATCTAAGCACACATATATGTCTATATTCATTAACATATATATGAATGTAGGCAATGCTAACATGAAACGGAGGAAGTACTAGTACATCCAACAAATTACCTCATGAAGGGCTTACAATTGAAGGGTGGCAATGAGTCTAGGGCTATCTTTTCTCTTGGTCATCATGCTTCCTCCATGGATTCAGGGCTTCTCTCATGGCTTGAGCCTCTGGGCTGGTTTCCCAAGCTCTTTTCTCTGAC | |||||||||
gi|88722369|gb|CI745879.1|CI745879 CI745879 Oryza sativa (japonica cultivar-group) library (Kikuchi S) Oryza sativa Japonica Gro ATGAATGTAGGCAATGCTAAC EST sequence (targeted fragment marked with yellow): GAGTTTTCTCAGGCCGGCCATGGGCGGCGCTGTGGGGAGGAGGTAGCTGGGGGGAGGGGAGAGACGCAGACTACGCGACTACCACAATCGCGACATCAAACGTCGACAGAATTTGTCCAGAAGAAAAAACTTAAAAATATAAGGGATAAAACTACTACTANGTGCATATTTAGAAATACAATACTTCCTCCGTTTCACAATATAAGTCATCCTAGTATTTCCTACATTCATATCGATATTAATGAATTTAGATATAGATCCATATAAAAGCCGAAAAATGCTAAAATGACTTACATTGTGAAACAGAGAAAGTACTACTTATTTTCATGAACATGAGGAGCAAGCAACAGTTGCTTATTTGTT | |||||||||
gi|86837399|gb|CI347831.1|CI347831 CI347831 Oryza sativa (japonica cultivar-group) flower Oryza sativa Japonica Group cDNA clone ATGAATGTAGGCAATGCTAAC EST sequence (targeted fragment marked with yellow): ACAATATAAGACTTTCTAGCATTGCCCACATTCATTTAGATTTTAATGAATCTAGACATATGTATGTATTTAGATTCATACCACACATATATACTGAGACCACTGAGGACAGTAATAGGCAAATCGGGGACGATCATCAATGCAAAAAAAAATACATGAGGATGAAACGAATCGCTACATGAGAAAAAAAAAGAAAAAAAAAAGAAAGAACAGAACAAACAGACTGGATTAGTATTTTGGCTTGTGAACCTGCTGCGTTGTCCGGTCATACCAGGGGATGGCAAGCGAGAAGCATCGCCAATGTGACGACGATCGCGGCATGAGCCTGCATCCTGCTCGCGAGCGACGGCGCCTGAGCTGTTCTTGCAGGCGGCAGCGGCGGCTCCGCCACGTCCGAGCCCGTCAGGAGGGGCATCGGCGACATCGCCGGCGGCTGCGCCGGCTTACTGATGATCTGCAGCAGGTCACCCGG | |||||||||
gi|88448242|gb|CI541828.1|CI541828 CI541828 Oryza sativa (japonica cultivar-group) root of seedling 2ppm BAP(benzyl amino purine ATGAATGTAGGCAATGCTAAC EST sequence (targeted fragment marked with yellow): ATCCAGAAATTTAGATTTATTTATTTAGGATAAAGAAAATATAAGATACTGCCTCCATTTCATATTATTACCTCCGTTTCATATTATAAAACTTTCTAGCATTGCCCACATTCATATAGTTATTAATGGATCTAGGCACACATATATATTTAGATTCATTACCATATATATGAATGTGAGTCTGCTACAAAGTCTTATAATATGAAACGAACGAAGCAAGAAAGGAGGAAAATATAGTATACAAAATAATACTATAATTCTCTATCTTAAAACAAAAGCAAGCACACGCACTACTACGTCATTTTAGCTAAAGTATTTTACTTCAATAATTCAAGACAACTCAAACTTAGTTGGCACACATGTACTCCACCCCCTATCACTAGAGTTGTTT | |||||||||
gi|87029549|gb|CI257344.1|CI257344 CI257344 Oryza sativa (japonica cultivar-group) same as Lib 23(supermix) Oryza sativa Japonic ATGAATGTAGGCAATGCTAAC EST sequence (targeted fragment marked with yellow): CCTTTGTTTTTTTTTTTTTTTTCTAGCATTGCCCACATTCATTTAGATATTAATGAATCTAGACATATGTATGTATTGAGATTCATACCACACATATATACTGAGACCACTGAGGACAGTAATAGGCAAATCAGGGACGATCATCAATGCAAAAAAAAATACATGAGGATGAAACGAATCGCTACATGAGAAAAAAAAAGAAAAAAAAAGAAAGAACAGAACAAACAGACTGGATTAGTATTTTGGCTTGTGAACCTGCTGCGTTGTCCGGTCATACCAGGGGATGGCAAGCGAGAAGCATCGCCAATGTGACGACGATCGCGGCATGAGCCTGCATCCTGCTCGCGAGCGACGGCGCCTGAGCTGTTCTTGCAGGCGGCAGCGGCGGCTCCGCCACGTCCGAGCCCGTCAGGAGGGGCATCGGCGACATCGCCGGCGGCTGCGCCGGCTTACTGATGATCTGCAGCAGGTCACCCGGGCGAGCCGGGGCCATGAAGCTCGGCGTGTTGTTCCCCATGTGCATACAGGTGTTCAATTTGTATCTCCGTGCTGTTGCCGGGAAATCTGTGATCACGCCATTCACTCCAGCACCCTGAACATACGCATTGATCTGCGCGGTCGCGTCCGAGAAGACGTCGTATGGCTGAGAA | |||||||||
gi|88517175|gb|CI444511.1|CI444511 CI444511 Oryza sativa (japonica cultivar-group) leaf of seedling 50ppm CuSO4 for 3 days Oryza ATGAATGTAGGCAATGCTAAC EST sequence (targeted fragment marked with yellow): CTAGCATTGCCCACATTCATTTAGATATTAATGAATCTAGACATATGTATGTATTTAGATTCATACCACACATATATACTGAGACCACTGAGGACAGTAATAGGCAAATCGGGGACGATCATCAATGCAAAAAAAAATACATGAGGATGAAACGAATCGCTACATGAGAAAAAAAAAGAAAAAAAAAGAAAGAACAGAACAAACAGACTGGATTAGTATTTTGGCTTGTGAACCTGCTGCGTTGTCCGGTCATACCAGGGGATGGCAAGCGAGAAGCATCGCCAATGTGACGACGATCGCGGCATGAGCCTGCATCCTGCTCGCGAGCGACGGCGCCTGAGCTGTTCTTGCAGGCGGCAGCGGCGGCTCCGCCACGTCCGAGCCCGTCAGGAGGGGCATCGGCGACATCGCCGGCGGCTG | |||||||||
gi|86875414|gb|CI322464.1|CI322464 CI322464 Oryza sativa (japonica cultivar-group) shoot Oryza sativa Japonica Group cDNA clone ATGAATGTAGGCAATGCTAAC EST sequence (targeted fragment marked with yellow): GCTGAAGACATTTCATCTCTTATAAATCTTAATGTTGATTGGATATGCTGTTGATTGCACCATCACAAACTCACCTAACCAGAGCTGCATGAATTGCTCTAGGATCTCGTATCACTCGCATTTTCTGTCACACATGGCTAAATAATTACATGAATAATGATCAAGCCGACTATAAGCTGAGTTGCACCATCATCTGCAATTTTTCCTGTGCAGATTTCAACCATATATACTCCCCCCGTTTCACAATGTAAGTCATTCTAGCATTTCCTATATTCATATTGACGTTAATAAATCTAGACTTATTTAT | |||||||||
gi|88963432|gb|CI028448.1|CI028448 CI028448 Oryza sativa (japonica cultivar-group) etiolated shoot Oryza sativa Japonica Group c ATGAATGTAGGCAATGCTAAC EST sequence (targeted fragment marked with yellow): TTTTTGCAAGATATAATGTGTTATATATGTTACTCCCTTCGTTTCACAATATAAGTCATTTTAGCATTTCCCACATTCATATTGATGCTAATGAATCTAGATTTACTCCCTCCGTTTCACAATGTAAGTTATTCTAGCATTTCCTAGATTTATATTGATGCTAATGAATCTAGACATATATATCTATCTAGATTCATTAGTATTAATATGAATGTGGAAAATACTAAAATGACTTACATTGTGAAACGGAGGAAGAATTTCGGTTTAGCGATGATTCTAAAACTAAACACTTTTCCATAAGACGAGGGACCCCGAGTGAACATTTTCCTTAGCCGCTCGCAGGGTCCAGCTGGGGCGCGGGAGCGCGAGACGCAAGCCCGCAACGCTGGCGTGCTCGCGTGAACTGGGTCCCGCACCGATTTATGGGGTCGACGCACAAATTGGCATCGTTTAAGCTGGCTTCGTTGTAGATCCTATAATAACGATACATCATTAATTCGATCATCCC | |||||||||
gi|88545215|gb|CI474762.1|CI474762 CI474762 Oryza sativa (japonica cultivar-group) 15 days after pollination pistil Oryza sativa ATGAATGTAGGCAATGCTAAC EST sequence (targeted fragment marked with yellow): CTTTTTTTTATTGTTTCAACTAATAACTAAACCTACAATAATAACACTCTACTATTATTAACATCAAGTATATATGGAGACACGGAAAAGTACAAGTCCTTGTCCTCTCCTCTTGTGTTTGTACAGTTCATCTAAAATGATATAAATATATACGCATCACTAATTAGTAATTACCTTAGTAAAATATAATTATTACTACCTCCATTTCAGGTTATAAAACTTTCTAGCATTGCCCACATTCATTCATATAGATGTTAATAAATCTAGGCATACATATATATCTAGATTTATTAACATATATATATGAATGTATGGGTAATGCTAAAAAGTTTTATAATATGAAACAGGGAAGTATTTCCCAACCTAGCTAGCTACATTAATATTCAGACAGAAAGACAGAGAGCTCCATGCAAGCATGGTGTACAAGAAGAGCCACACA | |||||||||
gi|58655236|gb|CK043916.1|CK043916 44434rsiceh_13183.y1 Oryza sativa cv. PA64s panicle ferile cDNA library Oryza sativa Indica G ATGAATGTAGGCAATGCTAAC EST sequence (targeted fragment marked with yellow): ACCTGGACATGTTTGAGGATTCTGAGTAAGTTTTACTGAATGTGTAATGAAGTGGTGGTTTCATTTTTAATTGACAGTTTTCTAAAACAAAATTCATGCTCACATGGGTGTCATAATACAAAGTAGTGACATTTCCCTATATATTTTCATATTAATCTAATTGACCATTCGACATTACAAATTAAATCCAGCGTCTTAATCGGTATGATGTGAAGAACCATAGCTAAAGTTAACCATCTTATTTCTATTTAATTCTGTTATGAACAAGCATCGCACATGGTAGCTACTTCCTCCGTTTTACAATGTAAGACTTTCTAGCATTGCCCACATTCATTAACATCTATATATATGTGGGCAATGCTAAAAAGTCTTACATTGTGAAACGGAGGGAGTAGTAGATATTCTCTTTATCTATTTTCAGCAATGGAGGAACCATAACTGAAGTTTATTGGGATACTGGAGGATGATATTGGCTACCTGTCCATCCACTTGCGACATACTCTCTCCGTCCCAAAAAAAANCCAATCCTGGGTTTTGAACCTGGACACACATGCGTTCAGGTCCAAACCCAGGATTGAGT | |||||||||
gi|33659363|gb|CF281976.1|CF281976 14ETL--09-E09.g1 Rice etiolated leaf plasmid cDNA library (14ETL) Oryza sativa Japonica Group ATGAATGTAGGCAATGCTAAC EST sequence (targeted fragment marked with yellow): TTTTTTTTTTTTTTTTAGAACTGTTCAACCTCTCCAAGCCTATAATTTCCTTGTTATCTAGTATGAAACATCAGTGCATCACATAAAGATGGCATGCCATCTGTGTATGTGTGTTGAACCAAAAAAAATATATATCAAGACATACGGGTGTATTCTTCTAAAGTATTTGTAGAAGCTACCACCTACCATCCAGAAGTTCGAGAGAGGTACAAATACTGCAAAAATGCTACTACCTCCGTTTCAGGTTACAGGACTTTCTAGCATTGCCCACATTCATATAGATGTTAATAAATCTAAGCGCACATATATGTCTATATTCATTAACATATATATGAATGTAGGCAATGCTAACATGAAACGGAGGGAGTACTAGTACATCCAACAAATTACCTCATGAAGGGCTTACAATTGAAGGGTGGCAATGAGTCTAGGGCTATCTTTTCTCTTGGTCATCATGCTTCCTCCATGGATTCAGGGCTTCTCTCATGGCTTGAGCCTCTGGGCTGGTTTCCCA | |||||||||
gi|88265839|gb|CI376741.1|CI376741 CI376741 Oryza sativa (japonica cultivar-group) callus Oryza sativa Japonica Group cDNA clone ATGAATGTAGGCAATGCTAAC EST sequence (targeted fragment marked with yellow): CGCAAGATAACTTTAGTTTCATCTCAAGTATGTGTTGCTGAAGACATTTCATCTCTTATAAATCTTAATGTTGATTGGATATGCTGTTGATTGCACCATCACAAACTCACCTAACCAGAGCTGCATGAATTGCTCTAGGATCTCGTATCACTCGCATTTTCTGTCACACATGGCTAAATAATTACATGAATAATGATCAAGCCGACTATAAGGTGAGTTGCACCATCATCTGCAATTTCTCCTGTGCAGATTTCAACCATATATACTCCCCCCGTTTCACAATGTAAGTCATTCTAGCATTTCCTATATTCATATGGACGTTAATAAATCTAGACATATATATCTATATAGATTCATTAACATCATTATAAATATGGGAAATGCTATGATGACTTACATTGTGAAACGGAGGAAGTACAACTGAAGGGGGCCAA | |||||||||
gi|86511655|gb|CI154288.1|CI154288 CI154288 Oryza sativa (japonica cultivar-group) Panicles mixture of one, two, three weeks aft ATGAATGTAGGCAATGCTAAC EST sequence (targeted fragment marked with yellow): GCTAATATCCATTATTATTCATATATTTGGTACCATGTCATTTCAATTTCACAAATATTAGAGATATGCCACTACATACCACTTCACAGTATTATCTACTTTCTCCGTTTCATATTATAAGACTTTCTAGCATTGCCCACATTCATATTTGTGTTAATAAATCTAGACATATATGTGCTAGATTCATTAACATCTATATAAATGTGGGTAATGCTAGAGCAGTGGTGGAGGACTCGCCATACCTCGCCGCCCGCTCGTACCAACACCCTCTACCTCCAACTCCGGCAAGCCGCTGACGGCAGTCAGGTGCAGAGGCGAGGTGCGGCGTCAGGCGATGGGCGAAGACAGGGCACTCGCTGCTGGGCCACTCTCCACTCAATCGTAGGCCCATTGGGCTCGTTTCGTGTTAATGTGGGCATATGTGGATGATTCACTAGACTTAACCCTAGCTCAGAAATTCCCCATCTCCGCCGCCGCGGCGGACGATGAGGC | |||||||||