miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse




mature miRNA: ATGTGCTAAAAAGTCAATGGT
species: Oryza sativa
database: miRNEST
The numbers on the right side of the alignments show a score calculated for them.
When calculating the score, a mismatch is given a score of 1, bulge: 2, and wobble: 0.5.

Predicted miRNA targets
gi|29667061|gb|CB663336.1|CB663336 OSJNEd08C17.r OSJNEd Oryza sativa Japonica Group cDNA clone OSJNEd08C17 3', mRNA sequence

ATGTGCTAAAAAGTCAATGGT
||.||||||||||||||||.|
TATACGATTTTTCAGTTACTA

EST sequence (targeted fragment marked with yellow):
TCGGGTAATGATGGAATCTGGCTGTGAGGAGGTGACACTTGAAGCAGAAGTTACGAACAAGGGCGCCCTCGCCTTATATGGTCGTTTGGGTTTCATCCGAGCAAAGAGGCTGTACAGATACTATCTGAATGGCGTCGACGCATTTCGCCTGAAGCTGCTATTTCCTCGCCCTGATCCTGGTATGCATCCAATGATGATGCTAGGCAATGAGAGAGATGACCAGCACATGGATTCTCCTTACTTGTGATACCATTCTGGTCGATTGATAGGATGAGTTAGGATCCAAGGCATTTTGCTCTTTTATGTCAGTTTGATGATGCTTTTGTAGCTTTGCTGTAACTCTTGTAACATTGATGTGTTCAAAGATAGTATCTTATTTGACATGGCATTATGTTTCTTTCAATCCATGTTAGACGGTTGAAAAAGAATGCCTTATTACATACTCCCTCCGTTTCTAAATATTTTACATCATTGACTTTTTAGCATATGTTTGACCATTCGTCTTATTTAAAAACTTTTGTGAAATATGTAAAACTATATGTATACATAAAAGTATATTTAACAATGAATCAAATGATAGGAAAAGAATTAATAATTACTTAAATTTTTTGAATAAGACGAACGGTCAAACATATTTAAAAAAATCAACGGCGTCAAATATTTAGAAACGGAGGGAGTATATTTCATTACTTGGCACTAGGAAGAAGAGTAGTTGGGGTATGAATTTGTATACCGTTTCGAATATTTCGATCCATTTCCTAAATTTATGGATTCATTGAT



gi|88485556|gb|CI422827.1|CI422827 CI422827 Oryza sativa (japonica cultivar-group) 4 days after transferring callus Oryza sativa

ATGTGCTAAAAAGTCAATGGT
|||||||||||||| ||.|||
TACACGATTTTTCAATTGCCA

EST sequence (targeted fragment marked with yellow):
GGAATACAAATCTTCATCACTAATATGACTTTAGAGACAAATATTAATACACAAAGTAATTATGCAAGAGAGCTATATACTCCCTCTGTTTCTAAATATTTGACACCGTTAACTTTTTAGCACATGTTTGACATTCGCCTTATTCAAAAACTTTTGTGAAATATGTAAAACTATATGTATACATTTAAGTATTTTTTCAATGAATCAAATGATATGAAAAGAATTAATAATTACTTAAATTTTTCTTAATAAGATGAACTGTCACACATATTTAAAAAAAGTTACCAGCGTCAACTATTTAGAAACGGATGGAGTATTCAATCCCCGTATTATGAGATTGCCCTATGGAAAGACTTCGATAATGGATCGAATACCTAACACAGGGCTTATCTTGTAGTCAGTGAATCCTGCCTCCTTGAATACCTTGCACCATTCTTTCTCACCTCTCTGCA



gi|88676347|gb|CI730460.1|CI730460 CI730460 Oryza sativa (japonica cultivar-group) 9 leaf-stage leaf Oryza sativa Japonica Group

ATGTGCTAAAAAGTCAATGGT
|||||||||||||||||.|||
TACACGATTTTTCAGTTGCCA

EST sequence (targeted fragment marked with yellow):
GATAGGATTAGAGGAGCCAAGATCGAACCGTCTTCAGTAGAGTAGCAGCAGAAGCAGCTCCTTCAGGCCAAATGATGAATTGGTAGAGGGTCATCCATACCATCTCCAAGATGCCATTGTTGATTGGACATTGAGGTCCTGGTTTTGCTTATCCGTTTCGTTCATCATCATCCTGATTCCTTCATGCCCCTCCAAAACCACGGGGTTGCCTCTGCAGATCACGGGTGCCCGGATCTTGAAGCACATGGACAGGCATGGAGCATGGGGTCCCTGTTACAGCTACAGAGAAACCCAGCTACACTGTAGCAACATCAACTGTAATAGTAACTACTCCCTCCGTTTAAAAATATTTGACACCGTTGACTTTTTAGCACATGTT



gi|88904810|gb|CI712109.1|CI712109 CI712109 Oryza sativa (japonica cultivar-group) 9 leaf-stage leaf Oryza sativa Japonica Group

ATGTGCTAAAAAGTCAATGGT
||||||||||||||||.|||
ACACGATTTTTCAGTTGCCA

EST sequence (targeted fragment marked with yellow):
GATAGGATTAGAGGAGCCAAGATCGAACCGTCTTCAGTAGAGTAGCAGCAGAAGCAGCTCCTTCAGGCCAAATGATGAATTGGTAGAGGGTCATCCATACCATCTCCAAGATGCCATTGTTGATTGGACATTGAGGTCCTGGTTTTGCTTATCCGTTTCGTTCATCATCATCCTGATTCCTTCATGCCCCTCCAAAACCACGGGGTTGCCTCTGCAGATCACGGGTGCCCGGATCTTGAAGCACATGGACAGGCATGGAGCATGGGGTCCCTGTTACAGCTACAGAGAAACCCAGCTACACTGTAGCAACATCAACTGTAATAGTAACTACTCCCTCCGTTTAAAAATATTTGACACCGTTGACTTTTTAGCACA



gi|88567758|gb|CI498475.1|CI498475 CI498475 Oryza sativa (japonica cultivar-group) 9 leaf-stage leaf Oryza sativa Japonica Group

ATGTGCTAAAAAGTCAATGGT
||||.|||||||.||||.|||
TACATGATTTTTTAGTTGCCA

EST sequence (targeted fragment marked with yellow):
ACCTAATCTTTTATACTACCTCCGTTTCAAAATGTTTGAAACCGTTGATTTTTTAGTACATGTTTGACCATTCATCTTATTCAAAAAATTTAAGTAATTATTTATTCTTTTCATATCATTTGATTCATCGTTAAATATACTTTTATGTACACATATAGTTTCACATATTTCACAATTTTTTTTTAATAAGAAAAACGGTCAAACATGTGCTAAAAAGTCAACGGGGTCAAATATTTTTAAACGGAGGGAGTACTTACTATTACAGTTGAAGTTGGCTAAGGGGT



gi|117247089|gb|CT850383.1|CT850383 CT850383 Oryza sativa (indica cultivar-group) cv. Guang Lu Ai 4 Oryza sativa Indica Group cD

ATGTGCTAAAAAGTCAATGGT
||||||.|||| |||||| |
TACACGGTTTTAAAGTTACGA

EST sequence (targeted fragment marked with yellow):
GGACAAGCGTGCACTGAAGGTCGCTAAGAGAAAGCTCGGTACCCACAAGAGAGCAAAGAAGAAGAGAGAGGAGATGGTGGGTGTCATCAGGAAGATGAGGTCTGCTGGTACTACTGACAAGAAGAAATAGAAGTTTCAAGTTGAAGATCTTTTTGCAATCCTTATTGTAATTCATTTATATGGACCTATAGTAAGCTCTAGATCGAGGTGCTGTATTGCCGTTGAGAACATTGCAATGCTATTGAGGAGCATTGAAATTTTGGCACATGTTTCGATACATCGGTTTTGTCACAATTTCTCAGGGTTGTATTGCCCTTGATTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGAGGGGGGGGGGGAAAATCTTGACCTCAAGGGGGGGCGGGCCCCCTGGGCCCCGGGGGGGGGCCGGGTACCAATTTCCCCCAATGGGGGTCCTTTTACCGCGCCCTCACGGGCCAACCTTTTACAATTCCGGGCTGGGAAAACCCGGGGCTTTTCCCCATTTTTATTCCCCTGGGGGAATATCCCCTTTTCCCCGCCGGGTTAAAAATCAAAAAGGCCCCCCCCCATTGCCCCTCCCAAAAGGTTGCCCCCCCCTAAAGGGGGAATGGGGCCCCCCCCCGGTGGGGGGCCTATTAACCCCCGGGGGGGGGGGGGGGTTTCCCCCCCCCCGGGCCCCCCCCACCCTTTGCCGGGTCCCTCTGGCGGCCCTTCCCCTTTTTGCTTTTTTTTTCCCTTTTCTTTTTTTCCGAGGGTTTTGGGGGGGGTTTTCTCCCCGTTAAGGGTTTTAAAATGGGGAGGCTCTCCCCTTTGGGGGTTCCCACATTTAAGAAGGTTTTTGGGGCACCCCCGGCCCCCCCCAAAAAAAATTTGTTTTGGGGGGGGGGGGGGGTGTCACCGGGTGGGGGGGCCCCCCCCCCCCCCTAAAAGAAGGGGTTTTTTTCCCCCCCTTTTTTAGTGGTGGGGACTCTCCCCCCTTTTTTTTTAAAAAAAGGGAGAACCTCTTTTTTTTCCCAAAATGGGGGAAAAAAAAATTTTAAAACCCTTTTTTTTTGGGGGTTTTTTTTTTTTTTTTTTTTTTTTATTTATAAGGAGGGGATATTTTTTCCACCCAATATTGCCCGCCCGCCTCTTTTGGGTGGTTATAAAAAAAAAAATGGGGCGGGGCGGTGGTTTTTTTTTAAACAAAAAAAAAATATTTTTTTTTGCGCGCCCGCCCGACGTATTTTTTTTTTTTATAATAAAGAAAAAGGGAATAATTTATTTTATTATTCCTGTCCGCTCCCGCGTGATGTAGAAAA



gi|87016014|gb|CI281757.1|CI281757 CI281757 Oryza sativa (japonica cultivar-group) supermix Oryza sativa Japonica Group cDNA clo

ATGTGCTAAAAAGTCAATGGT
|||||||||||||||||.|||
TACACGATTTTTCAGTTGCCA

EST sequence (targeted fragment marked with yellow):
TGGACAGAATTTGCACAACTAGCACAAGCCACATACTTCCTCCGTTTCAAAATGTTTGACACCGTTGACTTTTTAGCACATGTTTAACCGTTCGTCTTATTCAAAAATATTTGTAAAATATGTAAAACTATATGTACATGAAAATATATTTAACAGTGAATCAAATGATATGAAAAAAATAAATAATTACTTAAATTTTTTTAATAAGACGAATGGTCAAACATATACTAAAAAGTCAACCGTGTCAAACATTTTAAAATGGAGGGAGTATATAGCAAGCATTACAAAGTGTCTCATACAGATAAGCCACGGTACATATAAGTCATCGACGATAAACATTACTTAGTGTCTACAGACATAATTGCACACATCACATGTCGGCGTGGAACAGCCGTTGCCGCCGGCTGGCTACCTCCTGGATAGGCCTGACAGATATTAGCACCTCAAGGCCTACAGTCTCCCTGCTGCAGCGGTGTTGGCGAAGATGAGGCGCTGG



gi|89171780|gb|CI720839.1|CI720839 CI720839 Oryza sativa (japonica cultivar-group) 9 leaf-stage leaf Oryza sativa Japonica Group

ATGTGCTAAAAAGTCAATGGT
|||||||||||||||||.|||
TACACGATTTTTCAGTTGCCA

EST sequence (targeted fragment marked with yellow):
GATAGGATTAGAGGAGCCAAGATCGAACCGTCTTCAGTAGAGTAGCAGCAGAAGCAGCTCCTTCAGGCCAAATGATGAATTGGTAGAGGGTCATCCATACCATCTCCAAGATGCCATTGTTGATTGGACATTGAGGTCCTGGTTTTGCTTATCCGTTTCGTTCATCATCATCCTGATTCCTTCATGCCCCTCCAAAACCACGGGGTTGCCTCTGCAGATCACGGGTGCCCGGATCTTGAAGCACATGGACAGGCATGGAGCATGGGGTCCCTGTTACAGCTACAGAGAAACCCAGCTACACTGTAGCAACATCAACTGTAATAGTAACTACTCCCTCCGTTTAAAAATATTTGACACCGTTGACTTTTTAGCACATGTTTGACCGTTTGTCTTATTAA



gi|88481735|gb|CI419006.1|CI419006 CI419006 Oryza sativa (japonica cultivar-group) leaf of seedling 10mM H2O2 (10min), 24hr afte

ATGTGCTAAAAAGTCAATGGT
||||.||||||||||||.|||
TACATGATTTTTCAGTTGCCA

EST sequence (targeted fragment marked with yellow):
GGGTTGAAACTACAAGTATCGTTGTTATGGTAAAATACTCCCTCCGTTTCAAAATGTTTGACACCGTTGACTTTTTAGTACATGTTTGACCATTCATCTTATTTAAAAAATTTAAGTAATTATTTATTCTTTTCATATCATTTGATTCATTGTTAAATATACTTTTGTGTACACATATAGTTTTACATATTTCACAAAATTTTTTGAATAAGACGAACGGTCAAACATGTGCTAAAAAGTCAATGGTGTCAAACATTTTAAAATGGAGAGAGTACATTTCTCACTTCCAGTTTGCATGTCACAACATGTTACATCCCTACCTGAGCGGCATGGGGGCAAATGGAGCTCTCATTCAAGCATAGCAAGGTCACATGTCAAGCATTACAAACAAATT



gi|117223381|gb|CT846260.1|CT846260 CT846260 Oryza sativa (indica cultivar-group) cv. Guang Lu Ai 4 Oryza sativa Indica Group cD

ATGTGCTAAAAAGTCAATGGT
||.|.|||||| |||||.|||
TATATGATTTT-CAGTTGCCA

EST sequence (targeted fragment marked with yellow):
AACATCAATTGACCACCGCCTTTCCACATCCCCTTTTTCTGACGCTGCGTTTCCCCTTCCTGCAACCATCGATGGACTTCCTGAACTGTGTCTAGAATCTGATTCGACCGCATGGCAAGCCATCCACACACTGACGTTGTGACATGAGGAACCGATAGGAGATGGCCATGCTACGCTTCGCTTGGTGGTTTAGTTTCATCTGGTTGATTGGATGGGTTCATTTGACTCTAGATGAGACAATCAGGTATTTGTGTTTTAGTAAGCAATTGATGCAAATATCAAAATGATCTACTTCGCATCCACTTAGTCTTGCTTATGTTCCTTTTCTTACATGTTAATATTATGTGCATGAAATGCACCTTTTGTTGTTTCTGAATTTCCTGGCCTCCATGTGCACCTTCAATCGAATTTTATTCAGTTGCTATATATATGCAGGTCACTTCGCAATCCTGCAAATACTTAACGATTGGTTGGAGAAAGGCTGTTCAGGATGGAGCTGAAATACATGAGAAGAACTAAGAGATAAAACAGAAAATGTAGATGCGGGAACAAGAACAGCGTGCCCAGGATGGCTATACACAAGTCGACTTCAAGAAAATGTGAAGGGCTAAGAATGAGTATTTTTCTTATCCATTTAGTCCGTTGAATATGTTTGTGGTAGGTCCTCTCCATACTAATAAAGACAAACAACCTTATCTGATACGTACTCCCTCCGTTTCAAAATGTTTAATACCGTTGACTTTTAGTATATGTTTGACCATTCATCTTATTTAAAAAATTTAGTAATTATTTATTTTTCCATATCATTTGATCATTGTTAAATATACTTTTATATACACATATAATTTTACATATTTCATAAGTTTTTTTTAATAAGACAAATGGCCAAACATATTCTAAAAAGTTAATGGGGTCAAACATTTTAAAAC



gi|88673102|gb|CI727217.1|CI727217 CI727217 Oryza sativa (japonica cultivar-group) 9 leaf-stage leaf Oryza sativa Japonica Group

ATGTGCTAAAAAGTCAATGGT
|||||||||||||||||.|||
TACACGATTTTTCAGTTGCCA

EST sequence (targeted fragment marked with yellow):
GATAGGATTAGAGGAGCCAAGATCGAACCGTCTTCAGTAGAGTAGCAGCAGAAGCAGCTCCTTCAGGCCAAATGATGAATTGGTAGAGGGTCATCCATACCATCTCCAAGATGCCATTGTTGATTGGACATTGAGGTCCTGGTTTTGCTTATCCGTTTCGTTCATCATCATCCTGATTCCTTCATGCCCCTCCAAAACCANGGGGTTGCCTCTGCAGATCANGGGTGCCCGGATCTTGAAGCACATGGACAGGCATGGAGCATGGGGTCCCTGTTACAGCTACAGAGAAACCCAGCTACACTGTAGCAACATCAACTGTAATAGTAACTACTCCCTCCGTTTAAAAATATTTGACACCGTTGACTTTTTAGCACATGTTTGACCGTTTGTCTTATT



gi|88717443|gb|CI740953.1|CI740953 CI740953 Oryza sativa (japonica cultivar-group) library (Kikuchi S) Oryza sativa Japonica Gro

ATGTGCTAAAAAGTCAATGGT
|.||.||||||||| ||...|
TGCATGATTTTTCAATTGTTA

EST sequence (targeted fragment marked with yellow):
ATCTTCCGAACTTTCTGTCAGCACCCATGCTCTCAAGTTAGTTTAGCTAATACTCCCTCCGTTTCAAAATATTTGACATTGTTAACTTTTTAGTACGTGTTTGACCATTTGTCTTATTCAAAAAATTAAAGTAATTGTTTATTCTTTTTATATCATTTGATTTATTATTAAATATACTTTCATATATATATATATATATAGTTTTACATATTTCACAATTTTTTTTAATAAGATTAATGGTTAAACATGTGCTAAAAAGTCAACGGTGTTAAATATTTTGAAACGGAGGGAGTATTAATCTACTACAATTAGTTAGATTAGATAATGTTGTTATCTATTGCTAATACTATGTATCATTCGAATAATCTC



gi|88284382|gb|CI405828.1|CI405828 CI405828 Oryza sativa (japonica cultivar-group) 4 days after transferring callus Oryza sativa

ATGTGCTAAAAAGTCAATGGT
|||||||||||||| ||.|||
TACACGATTTTTCAATTGCCA

EST sequence (targeted fragment marked with yellow):
GGAATACAAATCTTCATCACTAATATGACTTTAGAGACAAATATTAATACACAAAGTAATTATGCAAGAGAGCTATATACTCCCTCTGTTTCTAAATATTCGACACCGTTAACTTTTTAGCACATGTTTGACATTCGTCTTATTCAAAAACTTTTGTGAAATATGTAAAACTATATGTATACATTTAAGTATTTTCTCAATGAATCACATGATATGAAAAGAATTAATAATTACTTAAATTTTTTTAATAAGATGAACTGCCAAACATATTTAAAAAAAGTTAACCAGCGTTAAATATTTAGAAACGGATGGAGTATTCAATTCCCGTATTATGAGATTGCCCTATGGAAAGACTTCGATAATGGATCGAATACCTAACACAGGGCTTATCTTGTAGTCAGTGAATCCTGCCTCC



gi|88473593|gb|CI410864.1|CI410864 CI410864 Oryza sativa (japonica cultivar-group) 4th leaf leaf 3mM SA(salicylic acid) for 1 da

ATGTGCTAAAAAGTCAATGGT
||.|||||||||||| |||||
TATACGATTTTTCAGGTACCA

EST sequence (targeted fragment marked with yellow):
GGTGAAAAATTCTTTTGACAACATTCATACAGCATATATACAACACTTCACAAAATCAACTTACAAACTGAGATATAAAAAAAGGGTCAAATTTAAATATCCTCACTCAAAATCTGTTACTCCCTCCATTTCTAAATATTGGACACCATGGACTTTTTAGCATATGTTGGACCGTCCGTCTTATTCAAAAACTTTTATGAAATATGTAAAACTATATGCATATATATAACTATATTTAACAATGAATCAAGTGATAGGAAAAGAATTAATAATTACTTAATTTTTTTAAATAAGATAAACTATAAAACATATTTAAAAAAGTCAACGGCGTCAAATATTTAGAAAACTGTAGGAGTACTGATGAAGCTGCATTTGCATTTGCGCGAATGTGACGCAGCTGGTGGAGGGGATCGAGGACACGGTGGGCGTGGGC



gi|86853030|gb|CI324732.1|CI324732 CI324732 Oryza sativa (japonica cultivar-group) shoot Oryza sativa Japonica Group cDNA clone

ATGTGCTAAAAAGTCAATGGT
||||| |||||||| ||.|||
TACACCATTTTTCAATTGCCA

EST sequence (targeted fragment marked with yellow):
ACTACTATAATATTCCCATCAAATTACAGACTTCGTGAATGACGTTGGCTAGTTCAAAACGTCAAACATTTCATAATGCAAGATAGTATTTTTCCACTCTGCTTAAATCAAATACTAGCTAGCTACTCGGCTCCCTCCGTTTCTAAATATTTGACACCGTTAACTTTTTACCACATATTTAACCGTTCGTCTTATTTAAAAACTTTTAAGAAGTATATAAAACTATATGTATATATATAAGTATATTTAACGATCAATCACATGATAGGAAAAGAATTAATAATTAGTTAATTTTTTTCAAATAAAACGAA



gi|66915881|gb|CX102729.1|CX102729 RECm3732 A normalized whole-life-cycle cDNA library of rice Oryza sativa Indica Group cDNA cl

ATGTGCTAAAAAGTCAATGGT
||||||.|||| |||||| |
TACACGGTTTTAAAGTTACGA

EST sequence (targeted fragment marked with yellow):
CGGCGGCTTAGGGTTTTGTAGCTGTCGCCGATCCAAGGTCCGAGGAGCGAGGAGGAGATCCGCCATGGCGCCGCCGCAGCCCAAGTCGGGGCTCTTCGTCGGCATCAACAAGGGCCACGTCGTCACCAAGCGCGAGCTGCCACCTCGCCCGTCCGACCGCAAGGGGAAAAGTACCAAGAGGGTGAATTTTGTCAGGGGCTTGATTAGGGAGGTTGTGGGATTTGCTCCATATGAGAAACGAATCACTGAGCTTCTGAAGGTTGGAAAGGACAAGCGTGCACTGAAGGTCGCTAAGAGAAAGCTCGGTACCCACAAGAGAGCAAAGAAGAAGAGAGAGGAGATGGTGGGTGTCATCAAGAAGATGAGGTCTGCTGGTACTACTGACAAGAAGAAATAGAAGTTTCAAGTTGAAGATCTTTTTGCAATCCTTATTGGAATTCATTTATATGGACCTATAGTAAGCTCTAGATCGAGGTGCTGTATTGCCGTTGAGAACATTGCAATGCTATTGAGGAGCATTGAAATTTTGGCACATGTTTCGATAAAAA



gi|88665624|gb|CI715780.1|CI715780 CI715780 Oryza sativa (japonica cultivar-group) 9 leaf-stage leaf Oryza sativa Japonica Group

ATGTGCTAAAAAGTCAATGGT
|||||||||||||||||.|||
TACACGATTTTTCAGTTGCCA

EST sequence (targeted fragment marked with yellow):
GATAGGATTAGAGGAGCCAAGATCGAACCGTCTTCAGTAGAGTAGCAGCAGAAGCAGCTCCTTCAGGCCAAATGATGAATTGGTAGAGGGTCATCCATACCATCTCCAAGATGCCATTGTTGATTGGACATTGAGGTCCTGGTTTTGCTTATCCGTTTCGTTCATCATCATCCTGATTCCTTCATGCCCCTCCAAAACCACGGGGTTGCCTCTGCAGATCACGGGTGCCCGGATCTTGAAGCACATGGACAGGCATGGAGCATGGGGTCCCTGTTACAGCTACAGAGAAACCCAGCTACACTGTAGCAACATCAACTGTAATAGTAACTACTCCCTCCGTTTAAAAATATTTGACACCGTTGACTTTTTAGCACATGTTTGACCGTT



gi|88376052|gb|CI530556.1|CI530556 CI530556 Oryza sativa (japonica cultivar-group) 1 day after pollination pistil Oryza sativa J

ATGTGCTAAAAAGTCAATGGT
|||||||||||||| ||.|||
TACACGATTTTTCAATTGCCA

EST sequence (targeted fragment marked with yellow):
GATAGATGATGATGTCGTTCTACTTATTACTCTCTCCATTTTACAATATAATTTATTCGTATTTTCCACATCCATATTGATGTCAATAAATATAGATATATATGTCTAGATTCATTAACATCAATATAAATATAGAAAATGCTAGAATAACTTACACTATGAAATGGAGGAAGTAGTACACAATACTACTATAATATTCCCATCAAATTACAGACTTCGTGAATGACGTTGGCTAGTTCAAAACGTCAAACATCTCATAATGCAAGATAGTATTTCCCCACTCTGCTTAAATCAAATACTACCTAGTACTCGCCTCCCTCCGTTTCTAAATATTTGACACCGTTAACTTTTTAGCACATATTTAACCGCCGGTCTTATTTAAAAACTT



gi|117246823|gb|CT843689.1|CT843689 CT843689 Oryza sativa (indica cultivar-group) cv. Guang Lu Ai 4 Oryza sativa Indica Group cD

ATGTGCTAAAAAGTCAATGGT
||||| ||||| .|||||.||
TACACAATTTTCTAGTTATCA

EST sequence (targeted fragment marked with yellow):
CGACGTAGCATGCAAGTGCTCTACACCGGCCTAACTACATAGATAGAGAGCATGGCCGACACCTCCACTGTTCCGGTGGCCGCTCCATCCGGTGATCCTCCAGTTGCGTCACCGGTGGCTGTTCCATGCAGTGATCTTCCAGCTGCACCGGTCGTCGATCCTCCGGATGTTCCGTCTCCCAAATCTCCGGCAGCCGATCCAGTTGTGCTGATTGATCCGAGTAAGGAGGAGCGTATGAACTCTGACCACCCACTTCCTAAATGTACAAACAATGGAAACTGTGGATGAGGTACCGGTATGTACTGTGAAAACCGTCCTCCCTCCGTGGCTCCGTTACCAAAAGATTGTGGAGTCTCCAAGCTGCTAGCATGGTCCGTGCTAGCACAAGATACCCTCTTACTGCCTTATGTGTGTACCGTTGAATTAATTGTAATGTTGTTTCAGAATTCAGATAATTTCATACACTGTGATCAGCAAATAAACCCCGCCGGCATTAGGGGCCAGTTACTGGCTTACTGTAAGGAAGTGCAGAGGCTATATTAATTACTCCCTCCGTTTCGTTTTATTTGATACTATTGATCTTTTAACACATGTTTGACCGTTCATCTTATTCAAAAACTTTTGTAAAATATGTAAAACTATACGTATGCATAAAAGTATATTTAACAATGAATCAAATTATAAGAAAAAAATAAATAATTATTTAAATTTTTTTGAATAAAACAAACGGTTCAAACATGTGCTAAAAAGTCAATGGTTGTCAATTAAAACGAAACCGGAGGGAGGACCTTGAAAGTGCAAAGGAAAAAAAAGCTTTAGGGTTTTCAACCCCCAAAATCCCTGGGTTTGAAATTTTCTCAAACACGTTTTCCCCAAATTTTTTTTTTCTAAAACCTTTATTTTTTAAAAAACCAAAAATTTTCCAGGGGTTTTTCCCCCTCCTTTTTTTTTTTTTTTTATATAATTATTTCTCAAAAAAAAAAAAGGGGGGTTTGGCCCCCAAAAAAAAAAAAACACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA



gi|29687576|gb|CB683851.1|CB683851 OSJNEf12M22.f OSJNEf Oryza sativa Japonica Group cDNA clone OSJNEf12M22 5', mRNA sequence

ATGTGCTAAAAAGTCAATGGT
||||||||||| |||||.|||
TACACGATTTT-CAGTTGCCA

EST sequence (targeted fragment marked with yellow):
CAAACTCCCACTAGCAGAGTAGCAGTCCATCAGCACATAAACCCTTCCATTCCAACCCCAATTAGCACTAGATCGTCATCGCTATCGGCTGCAGCAAAGAATGGCAGGAGCTGGGAGGACTAGGAGCACGGCCATGGCGGCGTGGTCGTACTCGTCGCTGCTGCTGCAGCTGCTGCTTCTCTCGATGGTCGCCGTACTAGACGGCGCGGCGACGACCGGCGGCGGCGGTGCCGGGGCGCCGGCGCCGGCGGCGGACTGCACGGACGCGCTGCTGAGCCTGGCGGGTTGCCTGAGCTACGTGCAGGAGGGGAGCACGGTGGCGAAGCCCGACGCGCCGTGCTGCTCGGGGCTCAAGGGCGTGGTGAAGAAGGAGGTGGCCTGCCTCTGCCAGGCGTTCCAGGGCAGCCAGAACTTCGGCGTCACGCTCAACATGACCAAGGCGCTCCAGCTGCCCGCCGCGTGCAAGGTCAAGACGCCGCCGTTCAGCAAGTGCCACCTTTCTATTCCGGGCGTGACTGGTGGTGCTCCTGGTAAGTTATTGATTGCTCAATTACAAAGTCATTATTTTTTTTCCTGATTACATAAAAGATACTCCCTCCGTTTCAAAATATTTGACACCGTTGACTTTTAGCACATGTTTGACCATTCGTCTTATTCAAAAACTTTTGTGAAATATGTAAAATTATATGCCTACATAAAAATATATTTAACAATGAATTAAATGATAGGAAAATAATTAATAATTACTTAAATTTTTTAAATAAGACGAACGGTCAAACCTATGCTAAAAAGTCAACGACGTCAAACATTTCGAAAATGGAGGGAGTACATGCACACACATC



gi|88568354|gb|CI499071.1|CI499071 CI499071 Oryza sativa (japonica cultivar-group) 9 leaf-stage leaf Oryza sativa Japonica Group

ATGTGCTAAAAAGTCAATGGT
||||.|||||||.||||.|||
TACATGATTTTTTAGTTGCCA

EST sequence (targeted fragment marked with yellow):
ACCTAATCTTTTATACTACCTCCGTTTCAAAATGTTTGACACCGTTGATTTTTTAGTACATGTTTGACCATTCATCTTATTCAAAAAATTTAAGTAATTATTTATTCTTTTCATATCATTTGATTCATCGTTAAATATACTTTTATGTACACATATAGTTTTACATATTTCACAATTTTTTTTTAATAAGACAAACGGTCAAACATGTGCTAAAAAGTCAACGGTGTCAAATATTTTTAAACGGAGGGAGTAGTTACTATTACAGTTGATGTTGCTACAGTGTAGCTGGGTTTCTCTGTAGCTGTAACAGGGACCCCATGCTCCATGCCTGTCCATGTGCTTCAAGATCCGGGCACCCGTGATCTGCAGAGGCAACCCCGTGG



gi|117222103|gb|CT845684.1|CT845684 CT845684 Oryza sativa (indica cultivar-group) cv. Guang Lu Ai 4 Oryza sativa Indica Group cD

ATGTGCTAAAAAGTCAATGGT
|||||||||||||||||..||
TACACGATTTTTCAGTTGTCA

EST sequence (targeted fragment marked with yellow):
TTCCCCCCTGCGGTCCCTTATCTATCCCCACTCGAGTCGAGATTTCGCTGGCGTTGCTGGTGATGGAGGAGCGAAAGGTGGAGGAGGAGGATTGGGACCAAGACGACGATGGTTCGGTCTCTTCCATCGATGTAGGTGCCCAGCTGGGGAATGGTATTGATCTTGGTACTGTTTGAGACGCCCACTGGATTTGCACTTTTTGGCTATGATGGAATCAAACTCCTCCGCCCAAATGCCCTCAAGGATGTATGGGGAGAATTTGTCATGGAATTTATGCTTCAATACCAACCTGTTTGGCTGAAAGATTTTCAAGCTTTCGAAGACAAGGCCAGCGCCCTTAACTTTGATACTGGTGTTAGCGAGCAGCTTGCAGGCATGATCCGGAAGTGTATCTGCCCTGGGCAGACACTAGCAGTTGGAAAGCCAGAATATGTAACTATCATTGAAAGTGACTTGGGAATAAAGTGCCTATGGAATGCTGAAGTGATGGAGTTGATGTGGGGCCTGAATAATCTAAAGGAACATTTAGTACCTGATGGAAAATCAGAGCTGAGTAAAGAGGATTGCCTCCCTATGTGTGAAGGGATGAAATTTACCCTGAATAAGTATGGCTTCGGTGATCTCAAACCAGAGATGGTTACTAGAAGTATCATTGAAGCGACGGGCCTCTTGTACGAGACTGACTATAATGTGAGGAAACATGGTGAGAGCATGCGCTATGCTTGTAAGCACTTGAAGGAGACATCTGGCATCAACGCTGAGGATTGGGACCTGCTGAAACTTGCAACTGCTATCATGATGTTATGTTACCCTAATGGTGAACACAAGTTGGTTGGGAACCTTCCCGAGCTTTTTGGAGATGACTATTTAAAGTTGGTGGATGATGCGCCTAAATATAAAGGTATATTCCGGAAGTTCTCTTGCTTGAGGGCTTATGCAGAAATGGTGCGGTCCCGTAGAATTAGGTCTAAGGCGGCTCGTAGTTTGGACTCTTTAGTCACGGCAGCTGAACGCATATACGACGAGGCTCAACAAGCGCTGATGCATGCGCAGCCAGGAGTGATCAAACAAGAGTAATACTGTTCTTACTATGCTCCCAAAGCGTCCAGCTGGGCTGCACCTGCATGCCCTGGTGTTTGATGCAGACATTAAGAGTGTTTGGTTGGTATGTTTACTATGTCACCCAACTAGTGATTTGATCACTGTACTCTTGTGTATTCTCAATTACTGGCATTTCAGACTGAGATGAATCATCAGACTATCTTGCATTGCTCTGTCCCTGTGGTTTACCTTTCTTCCTTTGTACTACCTCTGTGCCTAAATTCGATACTGTTGACTTTTTAGCACATGTTTAACTGTAGATCTTATTCAAAAACTTTTGTTAAATATGTAAAACTATGTGTATACATAAAAATATACTTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGGGCCCCTTGGCCCCGGGGGGGGGCCCGGCCCCCAATTCCCCCCAAAGGGGGGCTATAATACCCCCCCCCCCGGGGCCCGTTTTTAAAACCCCGGGGGGGGGAAAACCCGGGGGTTCCCCCATTTAAACCCCTTGGAAAAACCCCCCCTTTTCCCCGGGGGGGAAAAAAAAAAAAGGCCCCCCCCGATCCCCCCTCCCAAAATTTGCCCCCCCGAAAGGGGAAAGGGGAACCCCCCTTAAATCCCCAAAAAACCCGGGGGGGGGGGGGGGTTTTCCCCAAGGGACCCCATAACTTTGGCCGCCCCCTTTCCCCCCCCCCTTTTCTTTTTTCCCCCTCTTTTTCCCCCCCGTTCCCCGGTTTTCCCCCGGAAATTCCAAAAAGGGGGGGCCCCTTTTGGGGCCCAAATAAAGGGCTTTCCGGGCCCCCCCCCCCCAAAAAAAATTTTTTGGGGGGGGGGGTTCCCAAGGGGGGCCCCCCCCCTAAAAAAAGGTTTTCCCCCCC



gi|88202314|gb|CI201176.1|CI201176 CI201176 Oryza sativa (japonica cultivar-group) Panicles mixture of one, two, three weeks aft

ATGTGCTAAAAAGTCAATGGT
|||||||||||||||||.|||
TACACGATTTTTCAGTTGCCA

EST sequence (targeted fragment marked with yellow):
CTATGTAACCAGCAGAAAATCAGAGTCTGGGAAATGTACATCAGGAAAAATTGTACAAAGATCAACTTTTTTTTTACATTTTTGTAGTTTTGCAACTACAGATTGAAGTCGTATATACAAGAGGGTGATTCATCCATGAATCTTTTTCCCCAGTATTCTTTTCTTTCTAAATCTACTAATTAAACATACTCCATCCGTTTCAAAATGTTTGACACCGTTGACTTTTTAGCACATGTTTGACCGTTTGTCTTATTCAAAATAATTTGTAAAATATGTAAAACTATATATGTACATGAAAATATATTTAACAATGAATCAAATGATATGAAAAGAATAAATAATTACTTAAATTTTTTTAATAAGACGAATGGTCAAACACGTAATAAAAAGTCTAACGGTGTCAAACATTCTGAAACATTCTGAAACAGAGCAAGTATTAATTAAAGCTTTAAGCATGTATTGGGCTTCGAGCTTCTGAAAAAAAAATTGTTTCCCCAAAAAAGAAGTGGAAAAAATTGAATATTTATGCATCCTCTTGGATGATGCTCAGCACGCGCTTCAACCG



gi|86901243|gb|CI326086.1|CI326086 CI326086 Oryza sativa (japonica cultivar-group) shoot Oryza sativa Japonica Group cDNA clone

ATGTGCTAAAAAGTCAATGGT
|||||||||||||||||.|||
TACACGATTTTTCAGTTGCCA

EST sequence (targeted fragment marked with yellow):
GGGAAATGTAAATCAGGAAAAATTGTACAAAGATCAACTTTTTTTTTACATTTTTGTAGTTTTGCAACTACAGATTGAAGTCGTATATACAAGAGGGTGATTCATCCATGAATCTTTTTCCCCAGTATTCTTTTCTTTCTAAACTCTAATAATTAAACATACTCCATCCGTTTCAAAATGTTTGACACCGTTGACTTTTTAGCACATGTTTGACCGTTTGTCTTATTAAAATAATTTGTAAAATATGTAAAACTATATATGTACATGAAAATATATTTAAC



gi|117242754|gb|CT843553.1|CT843553 CT843553 Oryza sativa (indica cultivar-group) cv. Guang Lu Ai 4 Oryza sativa Indica Group cD

ATGTGCTAAAAAGTCAATGGT
|||||||||||||||||.||.
TACACGATTTTTCAGTTGCCG

EST sequence (targeted fragment marked with yellow):
GCGAACGCACGTTAACCCAGAGAGTGCACGTCACGCGCGCGCATCCGTGCATGGCCTCCGCGGCAGCGACGGCGACGACGAGGACGAGCCTCCGGCGCGCGGAGCTGTGCGCGGCGGCCGCGTCGGCCGCGGACGCGGCGTCGTGGTGCTTCGCGGTGGCGCTCGTCGCGCTCGTGCTGCTGTGCGCGCTCCGCGCGGAGGCCGTGGAGGTCCACGGCCCGCGGCTGGGGGGCGCGGCGGCGCGGCCGTGCGAGGAGGTGTACGTCGTCGGAGAAGGCGAGACGCTGCACACCATCAGCGACAAGTGCGGGGACCCCTTCATCGTGGAGAGTAGGCCGCACATACACGACCGAGACGACGTCTTCCCGGGCCTCGTCATCGCGCTCCGCCCTACCAAGAACAGCATTTAGCTTCGTGCATGGAAGTGCACGGGGTGAGCAAGAACTCCGAGTTTTCCGTCTTTTCATTTCTTCTCCTTTTTTTTTCTGTCTTTCTTTCTTGAATTCTTGAGAGGACAAGAAAGTGTAAGTTGTCCACCTGTATATAATACTTCCTCCGTTTCGAAATGTTTGACGCCGTTGACTTTTTAGCACATATTTGACCATTTGTCTTATTCAAAAAATTTAAGTAATTATTAATTCTTTTCTTATCATTTAATTCATTGTTAAATATATTTTTATGTAGGCATATAATTTTACATATTTCACAAAAGTTTTTGAATAAGACGAATGGTCAAACATGTGCTAAAAAGTCAACGGTGTTAAATATTTCGAAACGGAGGGAGTAGAACACAAGAAAAGTATAGTTGAATAAGCCGGCTCTTGCTTCGCCTTTCAAAAAAAAAAAAAAAAAAAAGGCCAGCTTGGCCTCGAGGGGGGGCCCGGTAC



gi|117235828|gb|CT860909.1|CT860909 CT860909 Oryza sativa (indica cultivar-group) cv. Guang Lu Ai 4 Oryza sativa Indica Group cD

ATGTGCTAAAAAGTCAATGGT
| ||||||||||||||.||.
AAAACGATTTTTCAGTTGCCG

EST sequence (targeted fragment marked with yellow):
CCGTGCAGTTCCACTCTTTTTTTTCTTTCTATAAAATCCCTCCCTTAAACCAAGCAACTTCCGCTGCGAACGCAAGTTAACCCAGAGAGTGCACGTCACGCGCGCGCATCCGTGCATGGCCTCCGCGGCAGCGACGGCGACGACGAGGACGAGCCTCCGGCGCGCGGAGCTGTGCGCGGCGGCCGCGTCGGCCGCGGACGCGGCGTCGTGGTGCTTCGCGGTGGCGCTCGTCGCGCTCGTGCTGCTGTGCGCGCTCCGCGCGGAGGCCGTGGAGGTCCACGGCCCGCGGCTGGGGGGCGCGGCGGCGCGGCCGTGCGAGGAGGTGTACGTCGTCGGGGAAGGCGAGACGCTGCACACCATCAGCGACAAGTGCGGGGACCCCTTCATCGTGGAGAGGAACCCGCACATACACGACCCCGACGACGTCTTCCCGGGCCTCGTCATCGCGCTCCGCCCTACCAAGAACAGCATTTAGCTTCGTGCATGGAAGTGCACGGGGTGAGCAAGAACTCCGAGTTTTCCGTCTTTTCATTTCTTCTCCTTTTTTTTTTCTGTCTTTCTTTCTTGAATTCTTGAGAGGACAAGAAAGTGTAAGTTGTCCACCTGTATATAATACTTCCTCCGTTTCGAAATGTTTGACGCCGTTGACTTTTTAGCAAAAAAAAAAAAAAAAAAAAGGCCAGCTTGGCCTCGAGGGGGGGCCCGGTAC



gi|117249629|gb|CT863312.1|CT863312 CT863312 Oryza sativa (indica cultivar-group) cv. Guang Lu Ai 4 Oryza sativa Indica Group cD

ATGTGCTAAAAAGTCAATGGT
||||| ||||| .|||||.||
TACACAATTTTCTAGTTATCA

EST sequence (targeted fragment marked with yellow):
GCATGCAAGTGCTCTACACCGGCCTAACTACATAGATAGAGAGCATGGCCGACACCTCCACTGTTCCGGTGGCCGCTCCATCCGGTGATCCTCCAGTTGCGTCACCGGTGGCTGTTCCATGCAGTGATCTTCCAGCTGCACCGGTCATCGATCCTCCGGATGTTCCGTCTCCCAAATCTCCGGCAGCCGATCCAGGTAGCTACTACCACACTTACTGCAGCCTTTTCTGCGGATATTTAGCTTTAAGCCACTTTTAAGATCTAATAATTAATTATTTGCCACTGGTAGTCTGACATGTGGGCCCTCAATGAAATGTGGACCCAGTGGTAAACCCTTAATTGCTACTTGTAAAAGTGACAAACAATTAAATATCTCGTTTGCCGCATGCATATATACATTTCTGCTGCTCATGGTCTCTTTTTTGCTAATTAGCTGTTGCCCATTTTCATGCTGATGTGCTGCAGTTGTGCTGATTGATCCGAGTAAGGAGGAGCGTATGAACTCTGACCACCCACTTCCTAAATGTACAAACAATGGAAACTGTGGATGAGGTACCGGTATGTACTGTGAAAACCGTCCTCCCTCCGTGGCTCCGTTACCAAAAGATTGTGGAGTCTCCAAGCTGCTAGCATGGTCCGTGCTAGCACAAGATACCCTCTTACTGCCTTATGTGTGTACCGTTGAATTAATTGTAATGTTGTTTCAGAATTCAGATAATTTCATACACTGTGATCAGCAAATAAACCCCGCCGGCATTAGGCGCCAGTTACTGGCTTACTGTTAGGAAGTGCAGAGGCTATATTAATTACTCCCTCCGTTTCGTTTTATTTGATACTATTGATCTTTTAACACATGGTTTGACCGTTCATCTTATTCAAAAACTTTTGTAAAATATGTAAACTATACCTATGCATAAAAGTATATTTAACAATGAATCAAATTTTAGGAAAAAAAATAAATAATTATTTAAATTTTTTTTAATTAAAACGAAAGGGCCCAACATGTGTGTTAAAAAATTCAAAGGGTGGGCAAAAAAAAAAAAAAAACCGAGGGAGGGAACTTTTATAAGTGGGAATAGATAAAAAGGGGTTTATGGTTTTTTACCCCCAAAAACCCTGTGTTTTTAATTTTTTTAAACACCCTTTCCCCAATTTTTTTTTTCTATTTCACTTTTTTTTTAAAAAAAAAAAATTTTTAGGGGGGG



gi|117228806|gb|CT846810.1|CT846810 CT846810 Oryza sativa (indica cultivar-group) cv. Guang Lu Ai 4 Oryza sativa Indica Group cD

ATGTGCTAAAAAGTCAATGGT
|..|||||||| |||||| |.
TGTACGATTTTACAGTTAACG

EST sequence (targeted fragment marked with yellow):
ATCCCCATTGCAGAACCTCTCTCCCTTCTTGGTTCTTCTTCTCATCTCCTCCCACTCCAGCTCTGCCCCTGAGCCAAGAACTGAGCAGCAGAGAGCTCGTGGTCTCCTTGCCAGCTTCTCCTCAGTCCTCACCAAGCTGTTCTTGCAGAGAAAACATAGCCAAAGAGCTAATTTGAGCTCCCACCATGAAGTACGTGCTGGTGACAGGAGGGGTGGTGAGCGGCCTCGGCAAGGGCGTGACCGCGAGCAGCATCGGCGTCGTGCTCAAGGCCTGCGGGCTCCGCGTCACCACCATCAAGATTGACCCATACCTCAACACTGATGCTGGAACCATGTCTCCGTTCGAGCATGGTGAGGTCTTCGTTTTGGACGATGGTGGAGAGGTGGACTTGGACCTTGGAAATTACGAACGTTTTCTGGACATCAAATTGACCCGTGATAACAACATAACCACGGGAAAAATATATCAGTCAGTCATTAACAAAGAAAGGAGAGGAGACTACTTGGGGAAAACCATTCAGGTTGTGCCACATATTACAGATGAAATTCAAGATTGGATTGAACGTGTAGCGATGAATCCGGTCGATGGTAAAGAAGGACCTCCTGATGTTTGTGTCATAGAACTTGGTGGCACCATAGGGGATATTGAATCAATGCCCTTTATTGAAGCATTAGGTCAATTTTCCTACCGTGTTGGACCTGGAAACTTCTGTCTGGTCCATGTCAGTCTTGTTCCAGTTTTAAATGTAGTTGGTGAACAGGTAAGTTCTGCTTATCTGAAACAACGATAGTTATCAAACATATGAGAGGTTATAATATTTGCAATTGACATTTTAGCATGTCACAGTTTTAATTATATTAAAAAACATACTTCCTGTTTCCTG



gi|88221865|gb|CI221821.1|CI221821 CI221821 Oryza sativa (japonica cultivar-group) mixed callus (Normalized Library) and mixed s

ATGTGCTAAAAAGTCAATGGT
||||.||||||||||||.||.
TACATGATTTTTCAGTTGCCG

EST sequence (targeted fragment marked with yellow):
CGAATTACCGGTATTTATTTTGTTTCCTTAGGCTTAAGCAGAAATTATGGAGTCTAATAAGCAGTGGCGCTTCCACGTTCAATCACAGGATCCTAGATATTTTATCCAATCATAACTAAAATGTGCCATTTTAATTAATATACTAACTAATAATTAGATAATCCCTCCGTTTCGAAATGTTTGACGCCGTTGACTTTTTAGTACATGTTTGACTATTCGTCTTATTCAAAAAATTTAAGTAATTATTAATTCTTTTCCTATCATTTGATTTATTGTTAAATATATTTTTATGTAGGCAAATAATTTTATATATTTCACAAAATTTTTAAATAAGACGAACGGTCAAACATGTGCTAAAAAGTCATTTTTATGTAGGCAAATAATTTTATATATTTCACAAAATTTTTAAATAAAACGAACGGTCAAACATGTGCTAAAATGTCAATGGTGTCAAACATTTCGAAACGGAGAGAGTAATTACTACTCCCTCCATTCCAAAATATTTGACGCCGTTGACTTTTTAAAACATGCTTTGACCGTTCGTCT



gi|88588266|gb|CI706072.1|CI706072 CI706072 Oryza sativa (japonica cultivar-group) 3rd week immature panicle Oryza sativa Japoni

ATGTGCTAAAAAGTCAATGGT
||||| |||||||||||.|||
TACACAATTTTTCAGTTGCCA

EST sequence (targeted fragment marked with yellow):
GTAAGAACAAACTATATGTCACTAGCTATATACCCCCTCCGTTTCAGAATGTTTGACACCGTTGACTTTTTAACACATGTTTAACCGTTCGTCTTGTTCAAAAACTTTTGTGAAATATGTAAAATTATATGCCTACATAAAAATATATTTAGCAATGAATCAAATGATAGAAAAAGAATTAATAATTACTTAAATTCTTTCGAATAAGACGAACGGTCAAACCATGTGCTAAAAAGTCAACGGCGTCAGACATTTCGAAACGGAGTGAGTATCAATTCGTGAGTGCAATTAACGTTGCTTGATCATCTGATGATGATGAACACACACAGCTTCTGGAAGAGCCANCCGGAGAAGATAATATCGTGCATCGGGTCGCTGGGGAGC



gi|88724683|gb|CI747942.1|CI747942 CI747942 Oryza sativa (japonica cultivar-group) library (Kikuchi S) Oryza sativa Japonica Gro

ATGTGCTAAAAAGTCAATGGT
|||||||||||| ||.|||
ACCACGATTTTTCAATTGCCA

EST sequence (targeted fragment marked with yellow):
ATGAGAATTTTTTTTCCTTGTATTGCATCTAATTAATACTCAATCCGTCTCTAAATGTTTGACACCGTTAACTTTTTAGCACCACGCTTGACCGTTCGTCTTAGTCAAAAAATTTATGAAATATGTAAAACTATATGTATACATAAAAGTATATTCAACAATGAATTAAATGATATGAAAAGAATCAATAATTACTTAATTTCTTAATAAGACGAATAGTACAACATGTCTAAAAAAAATCAACGGCGTGAAATATCAAATATTTAGAAACGGAGGGAGTAACTCGTAATATTCCTCCGGTCTCGACTCTCGAACTCCCACTCCTATTTTGTATACTGGT



gi|88670973|gb|CI725089.1|CI725089 CI725089 Oryza sativa (japonica cultivar-group) 9 leaf-stage leaf Oryza sativa Japonica Group

ATGTGCTAAAAAGTCAATGGT
|||||||||||||||||.|||
TACACGATTTTTCAGTTGCCA

EST sequence (targeted fragment marked with yellow):
GATAGGATTAGAGGAGCCAAGATCGAACCGTCTTCAGTAGAGTAGCAGCAGAAGCAGCTCCTTCAGGCCAAATGATGAATTGGTAGAGGGTCATCCATACCATCTCCAAGATGCCATTGTTGATTGGACATTGAGGTCCTGGTTTTGCTTATCCGTTTCGTTCATCATCATCCTGATTCCTTCATGCCCCTCCAAAACCACGGGGTTGCCTCTGCAGATCACGGGTGCCCGGATCTTGAAGCACATGGACAGGCATGGAGCATGGGGTCCCTGTTACAGCTACAGAGAAACCCAGCTANACTGTAGCAACATCAACTGTAATAGTAACTACTCCCTCCGTTTAAAAATATTTGACACCGTTGACTTTTTAGCACATGTTTGACCGTTTGTCTTA



gi|117222003|gb|CT852967.1|CT852967 CT852967 Oryza sativa (indica cultivar-group) cv. Guang Lu Ai 4 Oryza sativa Indica Group cD

ATGTGCTAAAAAGTCAATGGT
|||||| |||||.|| | |||
TACACGTTTTTTTAGGTTCCA

EST sequence (targeted fragment marked with yellow):
CTTTTTCCTTTTTTCCGTCGATTCACCATTGTTGCTTGGGGTGCAAGCGCCCAGCAGAGGCCAGTTTTACGCACCAAATGGCTTGCATATCACATATCTCCTGAAGAAGACCAAACGAGAAGCCATCTTCACTGCCCAGTCCGTGCCCGGCACCATCAGCATAGCTCTTCTTTCTTCTATGGTGTGTTCCTTGATGATGCAACTCACCACCACATGGCCATGGCGTTTCTTTTTCTGCTTGTTTTTCCACCTGCTGTTCCTCTTCCCAACCAACTCCTTGAATCAAAGCTACTGTGACCCTGGTGATGCTAGTGCACTGCTGGGCTTCATGCAAGGTCTCAGCGGAAGCGGCAGCGGCTGGACGGTCCCAAATGCCACTTCTGAAACAGCCAATTGCTGTGCTTGGCTTGGAGTCAAGTGCAACGATGGTGGCCGGGTCATCGGGCTGGACCTCCAAGGCATGAAGCTAAGGGGCGAGCTGGCAGTCTCGCTCGGGCAGCTGGACCAGCTCCAGTGGCTCAACCTGTCCAGCAACAACCTCCATGGTGCCGTCCCGGCAACCCTGGTCCAGCTCCAGAGGCTACAACGTCTTGATCTTAGCGACAATGAGTTCTCTGGTGAATTCCCGACCAACGTGTCTCTCCCAGTGATTGAGGTCTTCAATATATCCCTCAACTCATTCAAAGAACAGCATCCCACGCTCCATGGTTCAACGCTCCTTGCCATGTTTGATGCGGGTACAACATGTTCACAGGGCACATTGATACCAGCATCTGCGATCCAATGGAGTGATCCGTGTTCTCCGTTCACGTCGATCTCTATCTGGGGAGTCCAGCAGGGGTTGGGACTGCACAAGCTCGAGAGCTTATGTTGATCTAATAGCATACTGGGAGCTTGCAGATGACTTTTCAGGCTGTCTCGCTGAGGAACTGTCTTGCAGGAGATAGCTTTTGGTAGAAGACCCAAGGTTTGGAAAAATTTTACCCTTTTAACCGGCAATTTTTAATTATTCCTGTACCTCCAAGGTTTTTGGAGGCCTGCACCTTGGATTTTTTTGCACATACTTTTATGGGGGCCCGGCCTTTTCTTGCCCTTCCACACCCGAAATGTTTCCCGGAAAAAAATATTTTGGACAACAAAACCAATTGTGGGGGGGGACAAATGGCCCCTTTTACTTTGCCAAAAATATTTATGAAAAAAAAATTTTGTTTTTGTGTTGTTTTTGTGAGGGGTGATTTTTTCCCCACCCCCCCCCCGCGGAGGCCAAACCGGTTGGGGGGAAG



gi|89161825|gb|CI102173.1|CI102173 CI102173 Oryza sativa (japonica cultivar-group) Panicles one day after flowering Oryza sativa

ATGTGCTAAAAAGTCAATGGT
|||||||||||||| ||.|||
TACACGATTTTTCAATTGCCA

EST sequence (targeted fragment marked with yellow):
TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGGGAGGAAGTAGTACACAATACTACTATAATATTCCCATCAAATTACAGACTTCGTGAATGACGTTGGCTAGTTCAAAACGTCAAACATTTCATAATGCAAGATAGTATTTTTCCACTCTGCTCAAATCAAATACTAGCTAGTACTCGCTCCCTCCGTTTCTAAATATTTGACACCGTTAACTTTTTAGCACATATTTAACCGTTCGTCTTATTTAAAAACTTTTAAGAAGTATATAAAACTATATGTATATTTATTAGTATATTTAACGATGAATCAAATGATAGGAAAAGAATTAATAATTACTTAATTTTTTTTAAATAAAACGAACGGTCAAACATATTTAGAAAAATAAACGGTATTGAATATTTAGAAATAGATGGAGTATTTTATAGACAATTCCACACC



gi|88955250|gb|CI721822.1|CI721822 CI721822 Oryza sativa (japonica cultivar-group) 9 leaf-stage leaf Oryza sativa Japonica Group

ATGTGCTAAAAAGTCAATGGT
|||||||||||||||||.|||
TACACGATTTTTCAGTTGCCA

EST sequence (targeted fragment marked with yellow):
GATAGGATTAGAGGAGCCAAGATCGAACCGTCTTCAGTAGAGTAGCAGCAGAAGCAGCTCCTTCAGGCCAAATGATGAATTGGTAGAGGGTCATCCATACCATCTCCAAGATGCCATTGTTGATTGGACATTGAGGTCCTGGTTTTGCTTATCCGTTTCGTTCATCATCATCCTGATTCCTTCATGCCCCTCCAAAACCACGGGGTTGCCTCTGCAGATCACGGGTGCCCGGATCTTGAAGCACATGGACAGGCATGGAGCATGGGGTCCCTGTTACAGCTACAGAGAAACCCAGCTACACTGTAGCAACATCAACTGTAATAGTAACTACTCCCTCCGTTTAAAAATATTTGACACCGTTGACTTTTTAGCACATG