miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse




mature miRNA: CAACGAGGAGGCCGGGACCGT
species: Oryza sativa
database: miRNEST
The numbers on the right side of the alignments show a score calculated for them.
When calculating the score, a mismatch is given a score of 1, bulge: 2, and wobble: 0.5.

Predicted miRNA targets
gi|218491989|gb|FG964385.1|FG964385 MA_LYP9_03169 Mature embryo cDNA Library of LYP9 Oryza sativa Indica Group cDNA 5', mRNA seq

CAACGAGGAGGCCGGGACCGT
|||||||.||| |.||||| .
GTTGCTCTTCCAGTCCTGGAG

EST sequence (targeted fragment marked with yellow):
GTGGATCCCCCGGGCTGCAGATCGAATTCGAGAGGGGTAACATCCAACAGGAGGAGGTCCTGACCTTCTCGTTGCCCTCACCACTCAAGATGGCAGCCTGGACAGCAGCACCATAAGCAACAGCCTCATCTGGGTTGATGTTCTTGCAAAGCTCCTTGCCGTTGAAGAAATCCTGCAGGAGCTGCTGCACCCTCGGGATCCTAGTGGAGCCACCAACAAGGACAACATCATGAACAGAGCTCTTGTCCATCTTAGCATCCCTGAGGCACTTCTCCACAGGCTCCATACACTTCCTG



gi|33798391|gb|CF325053.1|CF325053 JMT1--02-D04.g1 AtJMT-overexpressing transgenic rice lambda phage cDNA library (JMT1) Oryza s

CAACGAGGAGGCCGGGACCGT
| |||||||||| |.|||||
GCTGCTCCTCCGTCTCTGGCT

EST sequence (targeted fragment marked with yellow):
GCACGAGGTTTTTTTTACAGAAAATATGAAAAAGTTATTTCATTGGTTTCTTCATGCACTTTCTCACACCAGCAACCATACCAGCCACTAGCTTCTAAATAATAGCTTTTATGCTCTCATGTGCATCCTTCAACTATCTATCACACACAAACTACTGTACATGTATCACACACCAGCACTGTACATGTTTCAAGAAATACAAATATGTGTAACTGCAATGGCCGCTCCCCCAGCCTCCCAGGGAACAAAAAAATTGATCAAGTCAAGAGAAATAATAAAAGAGAAACAAAACAATTGACCAATTCATTATGTATTGAGAGCATCGCAGGTAACTCCATAACTTCCACTCTAGTATGCTTTTCACTTTTCACTTGGGGGGAAATGATCGATTCTTATACCGAGGTGGCCTCATCTCATTTTCAGGGGCATCACTCTTGCCGCTGCTGCTCTTGCCTCTTAATGGCTCGGTCTCTGCCTCCTCGTCGTCGCGGCGCGCGAGCTAGGGTTTCTCGACTCGCCCTCGCCGATCCGGTCAGCCATGTCGAAGCAA



gi|88349717|gb|CI632852.1|CI632852 CI632852 Oryza sativa (japonica cultivar-group) library (Kikuchi S) Oryza sativa Japonica Gro

CAACGAGGAGGCCGGGACCGT
|| ||||||||||.| |||||
GTAGCTCCTCCGGTCGTGGCA

EST sequence (targeted fragment marked with yellow):
ATCATCATATTCCAAATTGAGAGGAAGATAGAGAAGCAGTGACATGGCGACCACTCAGAGCAATGAGCACGGTGCTGGCCTCCTCGATGCACAGCTCGAGCTCTAGGCCAACACGTTGGCCGTGGTCAAGTCCATGGCCCTCAAGACCGCCATGGACCTCGGCATCGCCGACGCCATCCACCACCACGGCGGCGCCGCCACCCTGCCCCAGATACTCACCAGGGTCACGCTCCACCCCTCCAAGATCCCGTGCCTGCGCCGCCTCATGCGCGTGCTCACCCTCACCGGCGTCTTCGCCGTCGAGAAGCCTACTGCGGCCGATGAGCCGCCCGTCTACGCGCTCACGCCGGTGTCCCGCCTCCTGGTCAGCTCCGGGAACCTGCAGCAGGCGCCCATCATGTCGTTGCTGCTCCACCCGAGCTGCATCACCCCC



gi|88454832|gb|CI511804.1|CI511804 CI511804 Oryza sativa (japonica cultivar-group) 2 nuclei stage pistil Oryza sativa Japonica G

CAACGAGGAGGCCGGGACCGT
||||| ||||| ||||| |.|
GTTGCGCCTCCAGCCCTCGTA

EST sequence (targeted fragment marked with yellow):
CCCAAGTTTTTACTGGATTCCACATCTGCAAAAGGGTGCGAATTGCACTGTGTTCTCATATGTGGCAACCTTGACACACAGATAGTAGTAACAGCTGGTAGAAAAAGCACCAAACCACTGCATTTGGCTGAGACACCACCCCATGTTGCCCTGTACCTGTAGAACTGTACTACTTCCAGAATTATACTTGTATTTATACAGTGACATACCAGTATGGCTACGGACGACACACGGTGGAAACGGCTATTTACACGGNGTCTTTTCGGCGGGTCCCACCATGATGCTCCCGACCTCCGCGTTGCGGAGGCCCAGCGCCGCCCGGAACACGCCGTTGACGGCGTCGGAAAGCCGGTCCAACGGCGCCGTCAGCTCCTCCGTCCGCCT



gi|88730064|gb|CI753679.1|CI753679 CI753679 Oryza sativa (japonica cultivar-group) 1 day after pollination pistil Oryza sativa J

CAACGAGGAGGCCGGGACCGT
|| |||||||||||.| |||
GTGGCTCCTCCGGCTCCGGCT

EST sequence (targeted fragment marked with yellow):
GAGATCTCGTTCCTCCTTTCCCCAAACCCTCGCGCTCGCGGCTCTGATCCAGCGCTCGCTGACGGCCGCGTCGGCCTCGGCCTCCTCGGTGGCGGCGGCGCGGGCGTGGGCCGGGTGGAGCCGGCCGTGACGCTCGACCAGGTGCCGTGGTGGAGCGACCCCGAACAGCGCCTCTCCTCCTCCTCTTCCCGCACTGGCACCGGATTCGTCAAGACTCCCTCCCCCCCCACCGCGTCCTCTTCGGTTTCACCACCACCACCAGCACCACCACCCAAGCAGAAAAAGCGCCTCCACCACCANCATCGACCTCTCCTCCGAGGAGAGCCGCCGTCGCCTCATCAACAGGCTGCTTTACA



gi|88403939|gb|CI601349.1|CI601349 CI601349 Oryza sativa (japonica cultivar-group) flower Oryza sativa Japonica Group cDNA clone

CAACGAGGAGGCCGGGACCGT
||||||||||||||| |||
TATGCTCCTCCGGCCCTTGCA

EST sequence (targeted fragment marked with yellow):
GGAGTAACGCACTAACGTAACGACGGTCGATGGCCATGGAACTGTCCTTCACCGTGCACCGCCGCGAGGCGGTACTCGTCGGCCCATCGGTTTCGACACCGTGCGAAACCAAGCGCCTCTCCGATATCGACGACCAAGAGTCCCTGCGCTACCACGTTCCCGGCCTCCTCGTATACCGTGGTGGTCAGCCTCCGGCGCCATGTGTCCGCGACAATGACCCGTCGGGCATCATCCGCGCGGCGCTGTCGCGGGCGCTGGTGCACTACTACCCGCTCGCCGGCAGGCTGAGAGAGGTGGAAGGACGGAAGCTGGTGATCGACTGCAGGGGCGAGGGGGTGGTGTTCGTGGAGGCGGACGCGGACGTCGGCTGGAAGAGATGGAGGCCGCCGCCGCT



gi|87015384|gb|CI275574.1|CI275574 CI275574 Oryza sativa (japonica cultivar-group) mixed callus (Normalized Library) Oryza sativ

CAACGAGGAGGCCGGGACCGT
| |||||||||| |.|||||
GCTGCTCCTCCGCCTCTGGCT

EST sequence (targeted fragment marked with yellow):
GAAAACTAACACTGGTTACTCATTGATTAGCACTCTATGTACACTACTAATCTCCCCTCTTACAAGTGATTAATTAATTAATTAACCAAGATGCATCATGCATCATGCTCATGCATGGCAGCTACTTGATCAGAAGTAATCGAAGTGGTTTTCCGGTCGGTAGTTGTACGGCTCTTGCCGCTCCTTCTTGCTCATCGTCATCACCTTCTTCGGCGCCGGCGCCGGCGGCGCAGGAACCTCCGGCGGCCGGACGGACCTGACGAGCGCCCAGTTGACGCCCTTGAAGAAGGGGTGCCGCTTCACCTCGGCGGAGCCCATGGTGCTCCCCAGCCGCTTCTTGGGGTTCTTTGCCAGGAGCTGCAACATCAGGTCCTGCGCCGTCTTCATCTCCTCCCATTCGCCGGCGGCGGCGGCGCCGGCGAGGCGAGGGAAGGTGACCGGCTGCTTGATGATGTTGATGAGGGTCTTCTCGTTGCTCTCGCCCTTGAACGGCGTCCGGCCGTACAGCATCTCGTACATGAACACGCCGAGCGTCCACCAGTCCACCGCGCTGCCGTGGCCCTGGCCGGAGATCACCTCCGGCGCCAGGTACTCGTGCGTGCCCACGAACGACTTGGACCGCGCCGCCACCGGCTCCACCACCACCACCTCGGGCTCCGCCGTCTCGGTCTCCGCCTCCTCGTCGTTGCCGTCGCCGTCG



gi|88280720|gb|CI401918.1|CI401918 CI401918 Oryza sativa (japonica cultivar-group) leaf of seedling irradiated with UVB Oryza sa

CAACGAGGAGGCCGGGACCGT
||| ||||||| |||. ||||
GTTCCTCCTCCCGCCTCGGCA

EST sequence (targeted fragment marked with yellow):
GGTCGAAATTAGACGGCCATTAATTTGAACTAGAGTATCACAAACTACGTACATCGACAAAATCCCGGTATCATGGTACTATGCATTTTCGCATGGAAAAATGGAGGTCCCTCGAAACCATCACATTTTTAAACAACCTAACACAAGAGCTAGATAAAAAAACAACAGTTGGTGGGGACACATCACTACAGCTCGTCCTTATCATACGACGACGGCTCCGCCCTCCTCCTTGATGTTGGATGATTCCTTCTCTTCAACCTCGGCCTCCTCGACCTCCTCTTCCTCTTCCANGGNCGCGTNGGGGCTCAGGTCAAGGCTCTTCTGCACCGACCTGTAGATGCTGGAGGCGAAGTCCTTGGGATCAGGAAGGTTGAAGCCGCTCTCCATGAGGGCCGTC



gi|88502911|gb|CI430417.1|CI430417 CI430417 Oryza sativa (japonica cultivar-group) callus 100ppm ZnSO4 for 1week Oryza sativa Ja

CAACGAGGAGGCCGGGACCGT
||||| ||||| ||||| |.|
GTTGCGCCTCCAGCCCTCGTA

EST sequence (targeted fragment marked with yellow):
GCAAAAGGGTGCGAATTGCACTGTGTTCTCATATGTGGCAACCTTGACACACAGATAGTAGTAACAGCTGGTAGAAAAAGCACCAAACCACTGCATTTGGCTGAGACACCACCCCATGTTGCCCTGTACCTGTAGAACTGTACTACTTCCAGAATTATACTTGTATTTATACAGTGACATACCAGTATGGCTACGGACGACACACGGTGGAAACGGCTATTTANACGGCGTCTTTTCGGCGGGTCCCACCATGATGCTCCCGACCTCCGCGTTGCGGAGGCACAGCGCCGCCCGGAACACGCCGTTGACGGCGTCGGANAGCCGGTCCAACGGCGCCGTCAGCTCCTCGTCNGCCCTCTAACCTCCTGCANCGCCGCCCGNA



gi|88203108|gb|CI202957.1|CI202957 CI202957 Oryza sativa (japonica cultivar-group) Panicles mixture of one, two, three weeks aft

CAACGAGGAGGCCGGGACCGT
| ||||||||| ||.|| |||
GCTGCTCCTCCTGCTCTTGCA

EST sequence (targeted fragment marked with yellow):
AAGCTATGAACTCATATCAGCAGTTATCCAAAGGCGCATGTAATGCTGATATTGTCTCATTTCATGAAAATGTGAAGAAACAGCGACTGCCACCAGAAACAATCAAGCAAGTTCAGTTAACGTGGCGAGCTCATCCTGTGTCCTTTCGGTCGAAATCTAACTACAGGTTCTTTTAACAAGTTAACTCCAGGTTATGATGCTGTAGACCTTCTCCATCATCAGCTAACAGCTCTAAACACGCTGCCTATGGTGCCGCCATCCTCAATGAAGAATATGATAAACCTTCCAAAAGCAGACTGGTATTAGTGCCAAATATTGCAAAATAATTTTATCTTGTTTCACTTTTGTTTCTCTTTGCCTCACATGCTTTCAAGGCTTGAACATGTGCTTGGCAGGCCTTCCAGCTGCGGTTGGACTCCACGAGGCAATCTCGCTGAGCTGCTTCACGTTCTCGTCCTCCTCGTCGGCGTCCATCACGTGGAGTGGGTGCGGCGGCGCAGGCGCAGCCGGAGGCGGCGGCGCGGGCGCGGTCCGGCCGTTGCTCGAGGAG



gi|29631383|gb|CB636392.1|CB636392 OSJNEa01N15.f OSJNEa Oryza sativa Japonica Group cDNA clone OSJNEa01N15 5', mRNA sequence

CAACGAGGAGGCCGGGACCGT
|| |||||||||||.| |||
GTGGCTCCTCCGGCTCCGGCT

EST sequence (targeted fragment marked with yellow):
CCGCCTCCTCCCATCCCACCATCCCAAACTTCTCTCGCACCAGTCACCCTCCTCCCGTCGCTTGGCCGCTCTCTCTCACTTCGCGCGCGCGCGCGAACCCGCACCTATCGCCGCCCATGCCCTCGCGCTCGCGGCTCTGATCCGGTCGCCATGCAGCAGCGCTCGCCGACGGCCGCGTCGGCCTCGGCCTCGGCCTCCTCGGTGGCGGCGGNGGCGGGCGTGGGCGGG



gi|117242389|gb|CT842981.1|CT842981 CT842981 Oryza sativa (indica cultivar-group) cv. Guang Lu Ai 4 Oryza sativa Indica Group cD

CAACGAGGAGGCCGGGACCGT
| |||||||||||| | |||.
GCTGCTCCTCCGGCGCCGGCG

EST sequence (targeted fragment marked with yellow):
CTGACCTAAACCCATCTCGATCCCTACCTAGCTAAGCTATTTCATTCACACCTCGATCAATCTCGATCGTCTCTCTCGTCTACTACTAGTACTAGCTTCTTCTCCTCCATTTCTGACCTGAGCTAGCTCAGAACAGAGAGCTGAGAATCATCAGCTAGCTAGCTAGGCGTCTGGGGAGAGAGCAGGAGCCATGTCGGAGTCGGAGGTGTCGGTGATCAACCAGCTGGAGGAGGAGGAGACTCGGCTGGAGCTGCCGCCGGGGTTCCGGTTCCACCCCACCGACGAGGAGGTGGTGACCCACTACCTCACCCGCAAGGCCCAGGACCGGAGCTTCTCCTGCGTCGTCATCGCCGACGTGAACCTCAACAACTGCGAGCCATGGGACCTCCCAAGCAAGGCGAAGATGGGGGAGAAGGAGTGGTTCTTCTTCTGCCACAAGGACCGCAAGTACCCGACGGGGATGAGGACGAACCGGGCGACGGCCAGCGGGTACTGGAAGGCCACCGGGAAGGACAAGGAGATCTTCCGCGGCCGCGGCCTCCTCGTCGGCATGAAGAAGACGCTCGTCTTCTACATGGGCCGCGCCCCCCGCGGCGAGAAGACCCCCTGGGTCATGCACGAATACCGCCTCGACGGCAAGCTTCCCCCCAACCTCCCCCGCTCCGCAAAGGAGGAATGGGCGGTTTGCCGGGTGTTCAACAAAGACTTGGCGGCAAAGATTGCCCAAATGCCGCCGCCTCCCTTCCCGCGCAACGACTCCTTCGACCTCGACCTCGACGACTTCCTCCACCTCGACGCCGACCTGCCGCCGCTCATCGACGACCCCTTCGCCTCCACCTCCACGCTCAAGACGGAGCCACCTCCGCCGGCCAACCTGATGCACAACCACTACGGCTACTTC



gi|88562845|gb|CI493562.1|CI493562 CI493562 Oryza sativa (japonica cultivar-group) 9 leaf-stage leaf Oryza sativa Japonica Group

CAACGAGGAGGCCGGGACCGT
||||.||||||||. || |.|
GTTGTTCCTCCGGTACTTGTA

EST sequence (targeted fragment marked with yellow):
GCAACATAACATATTGACTGAACACAGGCAGCAAATCCACACAAGATTAATATCGTTGCACAAGAGGTTGATAGAGCATTACATATTTAGATGAGGCACACAACCAAAGAAGCAGCAGCAGCTGACCAAAGTTTAGACCCATACATAGGGCAACCAGTCATTGCATACAAGATGATACTAGTGGATTATGGCAGCTTCTCTTTTTCTCTTCTGATTGAGCAGAGAGATGCCACCGCCATTATTTCTTGAGGTGAGGGAAGCACGCGGTGAGGTCGCTCTTCGGATGCTTCGCCTCAGCATGCTCTTTGCACTTGGTCTCAGAGGTGGTGCAGATGAAAGTCTGCATGCATATCTTGCACTGGATGTTCATGGCCTCCTTGTTGGCCTCAAGCTGGCTCCCCTTGGCGCCCTTGTTCTTCTCCAG



gi|58596188|gb|CK006716.1|CK006716 32794rsicef_4447.y1 Oryza sativa cv. PA64s panicle sterile cDNA library Oryza sativa Indica G

CAACGAGGAGGCCGGGACCGT
|| |||||||||||.| |||
GTGGCTCCTCCGGCTCCGGCT

EST sequence (targeted fragment marked with yellow):
GCACGAGGCTGATCCAGCGCTCGCTGACGGCCGCGTCGGCCTCGGCCTCCTCGGTGGCGGCGGCGCCGGGCGTGGGCCGGGTGGAGCCGGCCGTGACGCTCGACCAGGTGCCGTGGTGGAGCGACCCCGACCAGCGCCTCTCCTCCTCCTCTTCCCGCACTGCCACCGGATTCGTCAAGACTCCCTCCCCCCCCACCGCGTCCTCTTCGGTTTCACCACCACCACCAGCACCACCACCCAGCAGAACAGCGCCTCCACCACCACCATCGACCTCTCCTCCGACGAGAGCCGCCGTCGCCTCATCAACAGGCTGCTTTACAGGAGCAAGCAGCGGGGGTTCTTGGAGCTGGCCTCATACAAGCAGCGAGGACGACGGCAAGCCAGACCTCGGCGGCACCGGCGGCGGCTGATTACTGCTGCTGCTTCACCATGTCCTCTCTTGCAGCAGCCTGTCTAGATTTCTTGGCTCATCTAAACTCTGGATCTCTGCATGCTGACGAGGTTAGTAGGTTGCTCAAGTAACTGAGCATGGAGATGAAGACCAACAAAGTATGCTTCAGAGAAAAGCGCTGGTGTCCGGCAGCACGGCTACGCG



gi|88358050|gb|CI650786.1|CI650786 CI650786 Oryza sativa (japonica cultivar-group) leaf of seedling gamma-irradiated(45Gy), immi

CAACGAGGAGGCCGGGACCGT
|| ||||||||||.| |||||
GTAGCTCCTCCGGTCGTGGCA

EST sequence (targeted fragment marked with yellow):
ATCATATTCCAAATTGAGAGGAAGATAGAGAAGCAGTGACATGGCGACCACTCAGAGCAATGACCACGGTGCTGGCCTCCTCGATGCACAGCTCGAGCTCTACGCCAACACGTTGGCCGTGGTCAAGTCCATGGCCCTCAAGACCGCCATGGACCTCGGCATCGCCGACGCCATCCACCACCACGGGGGCGCCGCCACCCTGCCCCAGATACTCACCAGGGTCACGCTCCACCCCTCCAAGATCCCGTGCCTGCGCCGCCTCATGCGCGTGCTCACCCTCACCGGCGTCTTCGCCGTCGAGAAGCCTACTGCGGCCGATGAGCCGCCCGTCTACGCGCTCACGCCGGTGTCCCGCCTCCTGGTCAGCTCCGGGAACCTGCAGCAGGCGCCCATCATGTCGTTGCTGCTCCACCC



gi|29641202|gb|CB646209.1|CB646209 OSJNEb08I06.f OSJNEb Oryza sativa Japonica Group cDNA clone OSJNEb08I06 5', mRNA sequence

CAACGAGGAGGCCGGGACCGT
||| |||||||| |. |||||
GTTTCTCCTCCGCCTGTGGCA

EST sequence (targeted fragment marked with yellow):
AAGCGAGCGAGCTCTCCTTTCCTTTCTCCTACGCCTAGGCTTCTAGAAGCTTCCTTTCCAAATAGGGGCTAATCTCCTGAGCTCGAAGCTCTCCTCGTCAGCTTCAGGTGGTCGGGTGCTGCCTCCTCCTCCTCCTCCTCCTCCTCCTCGTCCTCAAATCTCCCCGAGAGTTCGTGCTTTGCCGCGAGCAGCGAGCTGCGATCTCGCCTGAATCCTTCATCGGCGGGGGGGATGAATTGATCACGCGGTGTGCGCTTTCTGATTCTGTCGGGTTCCTTTCAGATGCACGAGCACGACGGTGTCCGCCTCCTCTTTGCTTGATTTGCTTCCGCTGCTGCTGTTAGGTGCGCGAGAGCTCGTGATGGGGTGAAGCGTGTGTTCACAGGATTAGATTGCGCTCGCCTGATTCGCTGCATCTTGTTCTTCTTGCTGCCGCCTACGCGACTTGATTTCGTCACGCCAAAGCCGTGACAGGCTGATTGCTACCTTGCTTGGCGATCTGTGCTTTAAATTCCACCATTGTTTGCTGGTGCTGGATGAGCAAATTCTTGGATCGTGTGGCTCTAGTTGGTAGTTCTTGATTGAGGTGAGGTTCTGAGCTGCCATGAACTACCGAGTGGTGAACCCGGTGAAGGTGGAGAGCGGGCCGTCGACTGGCGTGGCGAATGGCCAGCCGCCGAGGCCGATGGACGGGCTCGCCGACGGCGGCCCACCGCCGTTCCTCACCAAGACGTACGACATGGTGGATGAC



gi|86519927|gb|CI160133.1|CI160133 CI160133 Oryza sativa (japonica cultivar-group) Panicles mixture of one, two, three weeks aft

CAACGAGGAGGCCGGGACCGT
||||| ||||||| .| ||||
GTTGCACCTCCGGATCGGGCA

EST sequence (targeted fragment marked with yellow):
CTCGTAAGGAAGGGGGGGAGGTGCGACGGGCTAGGCCTCCACGTTGAAGAACGCAAACGAGGGCTGACCCGGCTCGGCCGCCTCGAGCACCTTCTCGTCAACATCGACGTCCTTGTAGCTATCTTTGTCTTCGATCTGGTAGATGTGGATGTGGCTAAAGTGCATGCTCTTCCTAAAGTAGCCCGCAGCAGCACGCAGCGTGGCGATCTCGTCGAAGGGCAGCAGCCTGTTGAACGCGGTCTGGGCGCCAAAGTCGGCGATGCGCTTCTTGAAGGTGACGATGAAGTTCATCACCTTCCTGTCCTTGAGCATGCCGTCCTTGGCGAGCTGTTCGCGGATCGCCTTGTCATCGAATGCGCCCGTGTCGGGGTTGTAGTGCGCCTGGACGAGAGACACGCACCTGTCCTGCCAGGCGGGGAAGTTCTTGGCGACAAACATGCGGCACTGCTTGGGTGCGCGGTCGTTGTACTTGACCGGCGCCGCGTTCTTGCCCTTGGCCTTCTTGGTGAGCAGGATCTCGGCGTCGCGCACCGTCTCGACCGTCCCGGAC



gi|88231292|gb|CI231141.1|CI231141 CI231141 Oryza sativa (japonica cultivar-group) Panicles mixture of one, two, three weeks aft

CAACGAGGAGGCCGGGACCGT
||||| ||||||| .||||||
GTTGCACCTCCGGATCTGGCA

EST sequence (targeted fragment marked with yellow):
GAAGGGGGGACTTGATTGTATTGCTCTCGTAAGGAAGGGGGGGAGGTGCGACGGTCTAGGCCTCCACGTTGAAGAACGCAAACGAGGGCTGACCCGGCTCGGCCGCCTCGAGCACCTTCTCGTCGACATCGACGTCCTTGTAGCTATCTTTGTCTTCGATCTGGTAGATGTGGATGTGGCTAAAGTGCATGCTCTTCCTAAAGTAGCCCGCAGCAGCACGCAGCGTGGCGATCTCGTCGAAGGGCAGCAGCCTGTTGAACGCGGTCTGGGCGCCAAAGTCGGCGATGCGCTTCTTGAAGGTGACGATAAAGTTCATCACCTTCTTGTCCTTGAGCATGCCGTCCTTGGCGAGCTGTTCGCGGATCGCCTTGTCATCGAATGGCGCCCCGATGGTTCCGAGGCGTTGATAGTGCGCCTGGACGAGAGACACGCACCTGCCCTGCCAGGCGGG



gi|117224578|gb|CT860441.1|CT860441 CT860441 Oryza sativa (indica cultivar-group) cv. Guang Lu Ai 4 Oryza sativa Indica Group cD

CAACGAGGAGGCCGGGACCGT
||||.||||||||.. |||.|
GTTGTTCCTCCGGTTGTGGTA

EST sequence (targeted fragment marked with yellow):
AAGCCGCCCAAACCCTACACAATCTTCGAATCCCCACCGAATCGCGCGAGAGAGAAATCCAAGGCGAGGACGAGGAGGAGGAGAAGGAAGCTTCGAGAATGTTCCGGAACCAGTACGACACCGACGTGACGACGTGGAGCCCGGCGGGGCGGCTGTTCCAGGTGGAGTACGCCATGGAGGCCGTGAAGCAGGGCTCCGCCTGCGTCGGCCTCCGCTCCCGCACCCACGCCGTCCTCGCCGGCGCGAACAAGGCCGCCTCCGAGCTCTCCTCCCACCAGCGGAAGGTCTTCCGCGTCGCAGACCACGCCGGGTTCGCGCTCGCCGGCCTCACCGCCGACGGCCGCGTCCTCTCCCGATTCCTCCGCTCCGAGTGCATCAACCACGCCTTCGTCTACGACGCGCCCCTCCCCGTCTCCAGGCTCGCGCTCCGCCTTGCCGACAAGGCGCAGGTTTGCACACAGCGATCATGGAAGAGGCCATATGGTGTTGGCCTCCTTGTTGCTGGATTAGATGAGTCTGGAGCCCATCTATACTATAACTGCCCCAGCGGCAACTATTTTGAGTACCAGGCATTTGCTATTGGCTCTCGCTCTCAAGCCGCCAAGACTTTCCTTGAGCGCAGATTCGAGGGCTACAACGACTACACCCCAGAGCAACTTATCAAAGATGCCCTCTCCGCCATAAAGGAGACGCTGCAAGGTGAGAAGCTAACCAGCTCCAACTGCACCGTTGCTATTGTTGGGCAGAAGGACGATGGCACCGTTGAGCCATTTGAGATGATCGACGTGAAGAAGATCCAAGAAATAATCGATTCCATGGAGGCTGCCGAGGAGGCACCAGCGGCAGAGGCTGAGTCGAGCTCGATGCAGGAGGAGGACAGGGCACCGGACGCCGGCCCATGGACCATCTAGGCCCAAGATACATCTTAATCTCCTCCCTTACACGGGGTCTGGAGTTTCCAAAGGACTACTGGTTTTAGAAAAGCTGGGGACTGGGGGGGTCCCCCTTTTTTCAATCCCTACACCTTTTGGGGAGGGGCTTTTTTGACCCACATCGAATTGGGGGTTTGGGACCGAATTTTTTACTAGTGGAGGGGGGGCCAGAAAAAATTTTTTTGGGTTTGGGGGGGCCCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACAAAAAAAAAAAAAAAAAACCCTGGGGGGGGGGGGGCGGGGGGCCGCGCCCCCCCACCCCACCCTCCCCTTATAGGAGTAGGGTGGTTGGTTATATGTCGCCCGCGCGGCCCGCCTCCTCCTCGTGCGGCGGGCGCCGGCCGTGTGTGTT



gi|117227853|gb|CT848732.1|CT848732 CT848732 Oryza sativa (indica cultivar-group) cv. Guang Lu Ai 4 Oryza sativa Indica Group cD

CAACGAGGAGGCCGGGACCGT
||||||| ||||||.||||
TTTGCTCCACCGGCCTTGGCT

EST sequence (targeted fragment marked with yellow):
AGATCGAGAGGCCTCCTTCAGAACAAATCACGCCGCCGCCTCCCCGACGAACATCGCCGCCGCCGCCACCTCCCCCGCCGCCTCGCCGGCGTTCCCCAGCGCCGCCCGCCCCGTCGGTTCCGGCCACCTCGTTTTCATCGTCCCCGGCCATAACCGCCGCCCTGTCCAGCCAGGGGAAGTGAGGGATTCGGGCGTGGTCGGGGGGCGGTTCTCGTAGAGCTCCGCCGCGGTGAGCGGCTGCTTGAGTCCGCCGCTTCCGGGGCGGCCGCGGCGGCGACGAGCGCCTGGAGTGGAGGGTGTGGACGATCGGGCTCCCGGAGCTCCACTTGTAGCTGCACCTCCTGTTCCTTCTCCTCCTCTCTCTCTCTCTCCTCCCCCGCTTCCATGGCGAGGTGGCGGATATGGCGACCACGAAGCCGAGCCGTCCCCTTCCTCTCGCTGCTCCTCCTCGCGCCGCTCGTCTTCACAGTCTCCAGGC



gi|86520604|gb|CI160810.1|CI160810 CI160810 Oryza sativa (japonica cultivar-group) Panicles mixture of one, two, three weeks aft

CAACGAGGAGGCCGGGACCGT
||||| |||||| .||||||
GTTGCACCTCCGANTCTGGCA

EST sequence (targeted fragment marked with yellow):
GAGGAAGAAGGGGGGACTTGATTGTATTGCTCTCGGTAAGGAAGGGGGGGAGGTGCGACGGTCTNAGCCTCCACGTTGAAGAACGCAAACGAGGGCTGACCCGGCTCGGCCGCCTCGAGCACCTTCTCGTCGACATCGACGTCCTTGGTAGCTATCTTTGTCTTCGATCTGGTAGATGTGGATGTGGCTAAAGTGCATGCTCTTCCTAAAGTAGCCCGCAGCAGCACGCAGCGTGGCGATCTCGTCGAAGGGCAGCAGCCTGTTGAACGCGGTCTGGGCGCCAAAGTCGGCGATGCGCTTCTTGAAGGTGACGATAAAGTTCATCACCTTCTTGTCCTTGAGCATGCCGTCCTTGGCGAGCTGTTCGCGGATCGCCTTGTCATCGAATGCGCCCGTGTCGGGGTTGTAGTGCGCCTGGACGAGAGACACGCACCTGTCCTGCCAGGCGGGGAAGTTCTTGGCGACAAACATGCGGCACTGCTTGGGTGCGCGGTCGTTGTACTTGACCGGCGCCGCGTTCTTGCCCTTGGCCTTCTTGGTGAGCAGGATCTCGGCATCGCGCACCGTCTTGACCGTCCCGGACACGTACGCGAGCGCCTCGGCGATCGAATGGTCCACCGGCCCAGCCGCGGGCCAGCGCGCAGTCTGCACCGACGTGCCCTCGGCCAGCAGCTTGCTCCACACGTGTTCGGCAAAGTGC



gi|88331026|gb|CI638434.1|CI638434 CI638434 Oryza sativa (japonica cultivar-group) leaf of seedling 50ppm CuSO4 for 3 days Oryza

CAACGAGGAGGCCGGGACCGT
||||||||||||. ||| ||
CTTGCTCCTCCGGTGCTGCCA

EST sequence (targeted fragment marked with yellow):
GGAGTTAGCTAAGCTACCTCAAGTCTTGTCGATTAGGCTAGCAGCTAGAGATGCGCCTCGCCGGCGGCCTCCTCCTCCTCCTCCTCCTCTTGACTATTCCCGATGATGGAGCTCTCTCCGCCAGCCCTGCTGCCGCCGGCGGCGAGCGGTGCAGGCGGCAGTGCGGCGGGTTGGATGCCGTCCCCTACCCATTCGGCTTCTCCGGCAGCTGCCCCATCAAGCTGGCCTGCAACGAGAGCGGCTCGACGGCGGCGCTGATCCTCCCAGACAACGCCGCTGCGGATACGGCGGCGGAGTCGTACACCGTCGTGGCCTCCTCGTTCAACCGGACCGCCTCCACCTTCGTCGTCTCCCTCCCGCCGGCATGCAACCGCACCGTCGCCGGGGCGAGGCGGCGGCTCTCCGGCGCCAACTACGGCGTGTCGTC



gi|86520676|gb|CI160882.1|CI160882 CI160882 Oryza sativa (japonica cultivar-group) Panicles mixture of one, two, three weeks aft

CAACGAGGAGGCCGGGACCGT
||||| ||||||| .| ||||
GTTGCACCTCCGGATCGGGCA

EST sequence (targeted fragment marked with yellow):
TTTTAGAAGGGGGGACTTGATTGTATTGCTCTCGTAAGGAAGGGGGGGAGGTGCGACGGGCTAGGCCTCCACGTTGAAGAACGCAAACGAGGGCTGACCCGGCTCGGCCGCCTCGAGCACCTTCTCGTCAACATCGACGTCCTTGTAGCTATCTTTGTCTTCGATCTGGTAGATGTGGATGTGGCTAAAGTGCATGCTCTTCCTAAAGTAGCCCGCAGCAGCACGCAGCGTGGCGATCTCGTCGAAGGGCAGCAGCCTGTTGAACGCGGTCTGGGCGCCAAAGTCGGCGATGCGCTTCTTGAAGGTGACGATGAAGTTCATCACCTTCTTGTCCTTGAGCATGCCGTCCTTGGCGAGCTGTTCGCGGATCGCCTTGTCATCGAATGCGCCCGTGTCGGGGTTGTAGTGCGCCTGGACGAGAGACACGCACCTGTCCTGCCAGGCGGGGAAGTTCTTGGCGACAAACATGCGGCACTGCTTGGGTGCGCGGTCGTTGTACTTGACCGGCGCCGCGTTCTTGCCCTTGGCCTTCTTGGTGAGCAGGATCTCGGCGTCGCGCACCGTCTTGACCGTCCCGGACACGTACGCGAGCGCCTCGGC



gi|88509395|gb|CI436901.1|CI436901 CI436901 Oryza sativa (japonica cultivar-group) callus suspension-cultured cells treated with

CAACGAGGAGGCCGGGACCGT
||||| ||||| ||||| |.|
GTTGCGCCTCCAGCCCTCGTA

EST sequence (targeted fragment marked with yellow):
CTTTTTTTTTTTTTTTTTTAGTAACAGCTGGTAGAAAAAGCACCAAACCACTGCATTTGGCTGAGACACCACCCCATGTTGCCCTGTACCTGTAGAACTGTACTACTTCCAGAATTATACTTGTATTTATACAGTGACATACCAGTATGGCTACGGACGAAACACGGTGGAAACGGCTATTTACACGGCGTCTTTTCGGCGGGTCCCACCATGATGCTCCCGACCTCCGCGTTGCGGAGGCACAGCGCCGCCCGGAACACGCCGTTGACGGGGTCGGACAGCCGGTCCAACGGCGCCGTCAGCTCCTCCGTCCGCCTCTCCACCTCCTGCACCGCCGCCCGCAGCGCCGCCTCGTCGAGGTCGCCGTCGCCGTTGTCGAGCACGGATTTGAGCTTGCCGACGGCCTCGTCCACGGGGTCCACCTCGCTGGGTTTGGTGGC



gi|218491323|gb|FG965396.1|FG965396 MA_LYP9_04180 Mature embryo cDNA Library of LYP9 Oryza sativa Indica Group cDNA 5', mRNA seq

CAACGAGGAGGCCGGGACCGT
|| |||||||||||.| |||
GTGGCTCCTCCGGCTCCGGCT

EST sequence (targeted fragment marked with yellow):
ANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNATTCCGCTGACGGCCGCGTCGGCCTCGGCCTCCTCGGTGGCGGCGGCGCCGGGCGTGGGCCGGGTGGAGCCGGCCGTGACGCTCGACCAGGTGCCGTGGTGGAGCGACCCCGACCAGCGCCTCTCCTCCTCCTCTTCCCGCACTGCCACCGGATTCGTCAAGACTCCCTCCCCCCCCACCGCGTCCTCTTCGGTTTCACCACCACCACCACACCACCACCCAGCAAAACAGCGCCTCCACCACCACCATCGACCTCTCCTCCGACGAGAGCCGCCGTCGCCTCATCAACAGGCTGCTTTACAGGAGCAAGCAACGGGGGTTCTTGGAGCTGGCCTCATACAAGCAGCGATGACGACGGCAAGCCAGACCTCGGCGGCACCGGCGGCGGCTGATTACTGCTGCTGCTTCACCCTGTCCTCTCTTGCAACACCCTGTCTAGATTTCTTGGCTCATCTAAACTCTGGATCTCTGCATGCT



gi|117242634|gb|CT843481.1|CT843481 CT843481 Oryza sativa (indica cultivar-group) cv. Guang Lu Ai 4 Oryza sativa Indica Group cD

CAACGAGGAGGCCGGGACCGT
|| |||||||||||.| |||
GTGGCTCCTCCGGCTCCGGCT

EST sequence (targeted fragment marked with yellow):
AAAGAGAAGAAACTAAACACGCCCTCTCCTCCGCGGCTGAGCGGCTGCGGCTCCGCCTCCTCCCATCCCACCATCCCAAACTTCTCTCGCACCAGTCACCCTCCTCCCGTCGCTTGGCCGCTCTCTCCACTTCGCGCGCGCGCGCGAACCCGCACCTATCGCCGCCCATGCCCTCGCGCTCGCGGCTCTGATCCGGTCGCCATGCAGCAGCGCTCGCCGACGGCCGCGTCGGCCTCGGCCTCGGCCTCCTCGGTGGCGGCGGCGGCGGGCGTGGGCGGGGTGGAGCCGGCCGTGACGCTCGACCAGGTGCCGCGGTGGAGCGACGCCTACCAGCGCCTCTCCCCCTCCTCATCCCCCACCGCCGCCGGATCCGACGAGACCCCCGCCTCGTCGTTCCTCTCGTTCGCCGACCCGCTCATCGGCGACGGCGCGGCCGCTGGGGCCGGGGGCCGTGGCGCGTCCCGGTTCCCCGTCGACCACGAGATCAACTCGAAGATCTGTCTCTGGCGCGGCCACCCGTGGAACCTTGAGGTCGATGCCGTTGTCAATTCGACAAATGAGAACTTGGACGAGGCGCATAGTAGTCCAGGGCTGCATGCAGCGGCTGGGCCAGGGCTCGCCGAGGAGTGCACCACCCTGGGTGGTTGCCGGACTGGGATGGCTAAGATGACCAATGCATATGATCTGCCTGCTCGGAAGGTAATTCATACTGTGGGCCCTAAATATGCTGTCAAGTATCACACAGCTGCAG



gi|117250040|gb|CT843871.1|CT843871 CT843871 Oryza sativa (indica cultivar-group) cv. Guang Lu Ai 4 Oryza sativa Indica Group cD

CAACGAGGAGGCCGGGACCGT
||||||||||| ||||| |.
GTTGCTCCTCCCCCCCTGCCG

EST sequence (targeted fragment marked with yellow):
GCCAGCCCACTACCGCTCCGCTTCCTCCACCTTCGACCCCTCTTCTCCGCCGCCGTGCCGCTCTCCCCAAATGACGTCGCCGCCTCTTCCTCCTACGCACGCTCTGCCTCCGCCTCCGACGTCGGAAGCCGAGCCTCCTACGTGCCGGCACGCCGTTCTGTCCGCCGCCGTCCCCCCCTCCTCGTTGCTAGATGTGGAGAGGACTAGAGGAGCTTTGTGGCAGAGACGAGCTTCGACGATGCCGTCGCTTCTCCCCGGAGTCTAAAGAAAATGGCATCATCATCCATCAGCAGTTTGGAGCTCATTATTGTGCCTCCTCATTGTGCGATTTAGGTCATCAAGGTGTTGTGATCCAGACGCCATCCTTCACAACAGGGGGGGTGTTTGGCTTCAGCTACTGTTCTTCGTCGCCGTTGTTCTTGTTGTCGTAAACTCGTAATACTAACTTTGTATTTGGATCATGTGGCGTTTCTTTCGCCAGTTTATGCAATACAGTGAGAATGTCAGT



gi|29640681|gb|CB645690.1|CB645690 OSJNEb07J04.r OSJNEb Oryza sativa Japonica Group cDNA clone OSJNEb07J04 3', mRNA sequence

CAACGAGGAGGCCGGGACCGT
||||| |||||||||| |||
GTTGCCCCTCCGGCCCCGGCT

EST sequence (targeted fragment marked with yellow):
CCGCTGGGGATCTCGGACTGGAACTCCATCTTCTGGGTGGCGCACCCCGGAGGTCCGGCGATCCTGGACCAGGTGGAGGCGAAGGTTGGTCTGGACAAGGAGAGGATGAGGGCGACGCGCCACGTGCTGTCCGAGTACGGCAACATGTCGAGCGCCTGCGTGCTCTTCATCCTCGACGAGATGCGCAAGCGCTCCGCCGAGGACGGCCACGCCACCACCGGCGAGGGCATGGACTGGGGCGTCCTCTTCGGCTTCGGCCCCGGCCTCCCCGTTGAGACCGTTGTCCTCCACAGCGTCCCCATCACCGCCGGCGCCGCCGCCTGAGTGTTCCGCCTTGGTCGCCGCCGGCCGGCCTACGTACGCCACCCGTCATCTTTTATCATCGATCATAAAAAAAAATTATATATATATCGATATCGATATATATATATTTCCTAATAATAACTACTTCTCCAATAACATCGTTATCGAATTAAAAAGTTATTCCCTTTTGCCGTGTGTTGGTAGGGATAAAAAGTGAAAAAAAAAATTATTTCTTTGTTTTGCATGTGTCATGTATGGGTGGTTTGGTTGGTAGTAGCATATATATGTATACTGAAAAGAGAAAGGGAGGTCAATTAAGTGTCATGGATGGTGAGGTTTATTGTAAACCTGTGTAAGAAGATGCTTGGCTGTTACTATTCAAGGTGAAAACTTAATTAATTTTGTGTACCTCAAGCCTTAAAGGGGATCCACTC



gi|87016147|gb|CI281890.1|CI281890 CI281890 Oryza sativa (japonica cultivar-group) supermix Oryza sativa Japonica Group cDNA clo

CAACGAGGAGGCCGGGACCGT
| ||||||||| ||.|| |||
GCTGCTCCTCCTGCTCTTGCA

EST sequence (targeted fragment marked with yellow):
AAGCTGAACTCATATCAGCAGTTATCCAAAGGCGCATGTAATGCTGATATTGTCTCATTTCATGAAAATGTGAAGAAACAGCGACTGCCACCAGAAACAATCAAGCAAGTTCAGTTAACGTGGCGAGCTCATCCTGTGTCCTTTCGGTCGAAATCTAACTACAGGTTCTTTTAACAAGTTAACTCCAGGTTATGATGCTGTAGACCTTCTCCATCATCAGCTAACAGCTCTAAACACGCTGCCTATGGTGTCGCCATCCTCAATGAAGAATATGATAAACCTTCCAAAAGCAGACTGGTATTAGTGCCAAATATTGCAAAATAATTTTATCTTGTTTCACTTTTGTTTCTCTTTGCCTCACATGCTTTCAAGGCTTGAACATGTGCTTGGCAGGCCTTCCAGCTGCGGTTGGACTCCACGAGGCAATCCTGGAGGGAGAGGTAGAGGGCGGCGCACTCGCTGAGCTGCTTCACGTTCTCGTCCTCCTCGTCGGCGTCCATCACGTGGAGTGGGTGCGGCGGCGCAGGCGCAGCCGGAGGCGGCGGCGCGG



gi|66931616|gb|CX118464.1|CX118464 EI115C03 A normalized whole-life-cycle cDNA library of rice Oryza sativa Indica Group cDNA cl

CAACGAGGAGGCCGGGACCGT
||||||||||||||| || |.
GTTGCTCCTCCGGCCATGTCG

EST sequence (targeted fragment marked with yellow):
TGGGTACGGTCGGAATCCGGGTCGACCACGCGTCGGGAGCAGCTCGGCGGCGGCGGCGGCGGTGCCGGCGGGGATGGGCCGTTGGTGTACCAGCGCTGGAAAGGGAACAATGTATTTGTTCTTCAGGGGAGGTTTATATTTGGACCTGATGCAAGATCCTTGTACGTCACCATGTTCCTCATCATCGCGCCAGCGGCAATCTTTTGTGTGTTCGTTGCCAAAGAACTGATGGATAACTTCTCTTATGGTCTGGGATTACCAGTAATGATTGCAGCAGTTGTGTTCACGGCATATGACTTGAGCCTTCTACTTCTCACTTCTGGTAGGGATCCAGGTATTATACCTCGGAATGCACACCCTCCAGAACCTGAAGGTTTGGATGGCAATGCAGAGGTTGGATCTAACCAGACTCCACCAATGCGTTTGCCCCGAGTGAAGGATGTTGTTGTCAATGGAATCACTGTGAAGACAAAATACTGTGATACCTGCATGCTGTACCGGCCTCCTCGTTGCTCCCATTGCTCTATCTGAAACAACTGCGTTGAACGTTTTGACCATCACTGNCCATGGGTTGGGCAATGCATAGGACTTANGAATTACCCGTCCTTTAATATGTTTGGCCTCCTCAACAACTCTGGATCTGGCCTCTAAGGTCTTTGGGGATCCGGTGCGGGAATCACATGGCTAGAATCCGAAACTTCTGTGAACCAGCGTTACCAATTTTGGACG



gi|117250086|gb|CT843898.1|CT843898 CT843898 Oryza sativa (indica cultivar-group) cv. Guang Lu Ai 4 Oryza sativa Indica Group cD

CAACGAGGAGGCCGGGACCGT
|| |||||||||||.| |||
GTGGCTCCTCCGGCTCCGGCT

EST sequence (targeted fragment marked with yellow):
CCAGATCTCGTTCCTCCTTTCCCCAAACCCTCGCGCTCGCGGCTCTGATCCAGCGCTCGCTGACGGCCGCGTCGGCCTCGGCCTCCTCGGTGGCGGCGGCGCCGGGCGTGGGCCGGGTGGAGCCGGCCGTGACGCTCGACCAGGTGCCGTGGTGGAGCGACCCCGACCAGCGCCTCTCCTCCTCCTCTTCCCGCACTGCCACCGGATTCGTCAAGACTCCCTCCCCCCCCACCGCGTCCTCTTCGGTTTCACCACCACCACCAGCACCACCACCCAGCAGAACAGCGCCTCCACCACCACCATCGACCTCTCCTCCGACGAGAGCCGCCGTCGCCTCATCAACAGGCTGCTTTACAGGAGCAAGCAGCAGGGGTTCTTGGAGCTGGCCTCATACAAGCAGCGAGGACGACGGCAAGCCAGACCTCGGCGGCACCGGCGGCGGCTGATTACTGCTGCTGCTTCACCATGTCCTCTCTTGCAGCAGCCTGTCTAGATTTCTTGGCTCATCTAAACTCTGGATCTCTGCATGCTGACGAGGTTAGTAGGTTGCTCAAGTAACTGAGCATGGAGATGAAGACCAACAAAGTATGCTTCAGAGAAAAGCGCTGGTGTCCGGCAGCACGGCTACGCGGCAGGGACATGCGCGTGGCAAGTGGCGAGGCAGCAGGCAGCAGGCGCGATGCAGCAGGCGGAAGGCAAGCAGCAGCAGCAGCATGATTCTATGTATATCTATCCTCCCTGATTCATATATGTGATTTATTGCTGAAACTTCATTACTTGAGGGGTTCCTGAGCAAGCTGAGGCCGGCCCTGCCGCAGTTCAAGCACTTCTTGTCCCTGTCCCTGCCGCAGTTCAAGCACTTCCTATCCCTTTCACAGTT



gi|86598109|gb|CI278499.1|CI278499 CI278499 Oryza sativa (japonica cultivar-group) mixed shoot (Normalized Library) Oryza sativa

CAACGAGGAGGCCGGGACCGT
| ||||||||| ||.|| |||
GCTGCTCCTCCTGCTCTTGCA

EST sequence (targeted fragment marked with yellow):
TTTTTTTTTTTTTTTTTTTTTTTTTAAGCTATGAACTCATATCAGCAGTTATCCAAAGGGCGCATGTAATGCTGATATTGTCTCATTTCATGAAAATGTGAAGAAACAGCGACTGCCACCAGAAACAATCAAGCAAGTTCAGTTAACGTGGCGAGCTCATCCTGTGTCCTTTCGGTCGAAATCTAACTACAGGTTCTTTTAACAAGTTAACTCCAGGTTATGATGCTGTAGACCTTCTCCATCATCAGCTAACAGCTCTAAACACGCTGCCTATGGTGTCGCCATCCTCAATGAAGAATATGATAAACCTTCCAAAAGCAGACTGGTATTAGTGCCAAATATTGCAAAATAATTTTATCTTGTTTCACTTTTGTTTCTCTTTGCCTCACATGCTTTCAAGGCTTGAACATGTGCTTGGCAGGCCTTCCAGCTGCGGTTGGACTCCACGAGGCAATCCTGGAGGGAGAGGTTTAGGGCGGCGCACTCGCTGAGCTGCTTCACGTTCTCGTCCTCCTCGTCGGCGTCCATCACGTGGAGTGGGTGCGGCGGCGCAGGCGCAGCCGGAGGCGGCGGCGCGGGCGCGGTCCGGCCGTTGCTCGAGGAGGAGCCCATGGTTTTCGCCCTCTTTCGTCGGTGTCGAATCGGTCTCCAGTAGGCCAACAGTGCTCGAGGAATTCCGGACCGGTACCAGCCTGCTTTT



gi|86889254|gb|CI315865.1|CI315865 CI315865 Oryza sativa (japonica cultivar-group) shoot Oryza sativa Japonica Group cDNA clone

CAACGAGGAGGCCGGGACCGT
||| |||||||| ||.|||||
GTTCCTCCTCCG-CCTTGGCA

EST sequence (targeted fragment marked with yellow):
GATCGAAATTAGACGGCCATTAATTTGAACTAGAGTATCACAAACTACGTACATCGACAAAATCCCCGTATCATGGTACTATGCATTTTCGCATGGAAAAATGGACGTCCCTCGAAACCATCACATTTTTAAACAACCTAACACAAGAGCTAGATAAAAAAACAAAAGTTGGTGGCGACACATCACTACAGCTCGTCCTTATCATACGACGACGGTTCCGCCTCCTCCTTGATGTTGGATGATTCCTTCTCTTCAACCTCGGCCTCCTCGACCTCCTCTTCCTCTTCCACGGGCGCGTCGGGGCTCAGGTCAAGGCTCTTCTGCACCGACCTGTAGATGCTGGAGGCGAAGTCCTTGGGATCAGGAAGGTTGAAGCCGCTCTCCATGAGGGCCGTCTGGTACACCAGCTTCGCCGTCTGTTTCAAGCTCTCGCTCTCGCTGTCCTGGGCGACCTTGTCAGGGAGTTACTTGATGA



gi|88468761|gb|CI502168.1|CI502168 CI502168 Oryza sativa (japonica cultivar-group) 2 nuclei stage pistil Oryza sativa Japonica G

CAACGAGGAGGCCGGGACCGT
||||| ||||| ||||| |.|
GTTGCGCCTCCAGCCCTCGTA

EST sequence (targeted fragment marked with yellow):
CCCAAGTTTTTACTGGATTCCACATCTGCAAAAGGGTGCGAATTGCACTGTGTTCTCATATGTGGCAACCTTGACACACAGATAGTAGTAACAGCTGGTAGAAAAAGCACCAAACCACTGCATTTGGCTGAGACACCACCCCATGTTTGCCTGTACCTGTAGAACTGTACTACTTCCAGAATTATACTTGTATTCATACAGTGACATANCAGTATGGCTACGGNACACACACGGTGGAAACGGCTATTTACACGGCGTCTTTTCGGCGGGTCCCACCATGATGCTCCCGACCTCCGCGTTGCGGAGGCACCGGCCCGCCCGCAACACGCCGCTGACGGCGTCGCACACC



gi|88666674|gb|CI718810.1|CI718810 CI718810 Oryza sativa (japonica cultivar-group) library (Kikuchi S) Oryza sativa Japonica Gro

CAACGAGGAGGCCGGGACCGT
| |||||||||||||| | |.
GCTGCTCCTCCGGCCCAGTCG

EST sequence (targeted fragment marked with yellow):
TTCCCTCGCTCTGCTCTCTCCATGCCCAGGCGAGGGAGTCCGCCGCCTCGCCTCCTCACGCGAGCCACTGCTGTCGCCGCACCATCGTACTGTCGTCGCCATCCTCCTCTCGCTCCGGTCGATGCATCCGCCAACGAGGAGGCCGGGACCGTCGGATCCGGCTGACCCGGCCTCCTCGTCGGCGGAGGGGAGACCGACTGTCACCCTCTCTACTCTTCTCCTTCTACGTCCGGCCCCGCTACCACGACGGCCGCGCGGATCGCGTGAGGCAACGGGTGGCTGCTCCCTANTCTTCTCCCTCTCCCTCTCCATTCTCTTCCTTTGCAGATCGGNGGAGGCTTGCAACAACAACAACGGCTGCGTGG