| mature miRNA: CACGAGACGAATCTTTTGAGC species: Oryza sativa database: miRNEST The numbers on the right side of the alignments show a score calculated for them. When calculating the score, a mismatch is given a score of 1, bulge: 2, and wobble: 0.5. |
| Predicted miRNA targets | |||||||||
gi|29623261|gb|CB628272.1|CB628272 OSIIEb03L19.f OSIIEb Oryza sativa Indica Group cDNA clone OSIIEb03L19 5', mRNA sequence CACGAGACGAATCTTTTGAGC EST sequence (targeted fragment marked with yellow): AAAGTTTACTGGAGCATCACATTGTCAACTTTATGACATAATTAGACTCAAAAGATTCGTCTCGCGAATTAGTCCAAGCTTATGGAATAGGTTTTGTAATTAATGGATGTTTAATACTCCAAATTAGTGTCCAAATATCCGATGTGACATGGACTTGGAATAAGTCCCTGGAAACCAAACAGCCCCTTAGCAGCTCCAAGTCACCGGATTTGCCTTCTACAGTTTGTTTTCTTCCACTGGCAACCTTTATTTTTTTTTAATGTTTGGCCCGTCTTTCCCTCCTTTGCCTGCCTGCCAATTCCCCCAGGCTCGCCACCCTGGCCGATCCGTGACCCAACCACCGCACCACCTCCACCTTACATTTTGCTGGATGCTCGAGCAGTCGGCGCAAAAGCTCTCCACCGACGAAGCTCGCCGCCCGTTGGATCTAGCAGCAGCATGTGGAGTTGGGGCAAGTGGGTGTCGGAGATCTGAAAGCTGCACAAGAACTCGCGCATCTGGCTCTGCACGTTTGCCACCGCCGTGCCATCAAGGGCCGCGCCACCCCCGTCCTCTTCAACTAACCGGAGATCGCGCACGTGCTTCCCCGCTCGGCTTCGGCAGCCCCCAACGACGTGAGAGCCACACGGCGCTCGCGACGGCGATGGACGACCCCGATCCGGCGGCGGTCGCGGC | |||||||||
gi|58688932|gb|CK077619.1|CK077619 77869rsicen_1403.y1 Oryza sativa cv. LYP9 booting whole plant cDNA library Oryza sativa Indic CACGAGACGAATCTTTTGAGC EST sequence (targeted fragment marked with yellow): TGAAGGAGGAAGGACGATGATGATGAGATTGGGAAGGAAGGAAGGAAGGAAGGAAGGAAGCAAAGCATGCCCTTCTGGGTGCTTGCTTTGTGCACACGCCTCTTCCGTTTCTTGAAACACATGGAGTATTATTAGAAGTGATTGTGATTCTTTTTTCTTGTTTAATTATTACTGCTAGCTAGTACTGATTGTGCCTAGATTGATCGTGTGTGTGGAGGAGTTAAGTTTTCTGCATTTGTTAGCTGCGAAGTTTGGTGGCCTGGTAGGTGTTCTTCTTGCCAATGTGTGATGATACTACTACTAATACTACGTTATTGGTCACCTGTTCATTGCATTGTTCATTGGTACTTTGATTTTGTACTGAATATATATAATTATAGTCGCAGCTTCCAATCTCTGGCTTGTTCATTGTGGAGTACTAAGGGGGTGTTTAGATGGGGCTAAAACTTTTTAGTCCGTGTCACATCGAATGTTTGACGCTAATTTGGAGTATTAAACATAGACTAATAAAAAAACTAATTTCATAAATGAAAGCTAATCTGCGGGACGAATTTTTTAAGCCTAATTAATCCATAATTATGAAAAGTTTACTGTAGCATCACATTGTCAAATCATGGTGTAATTAGACTCAAAAGATTCGTCTCGCGAATTAGTCCAAGGTTATAGA | |||||||||
gi|40488074|gb|BX898703.1|BX898703 BX898703 Oryza sativa library (Han B) Oryza sativa cDNA clone y745h12p3, mRNA sequence CACGAGACGAATCTTTTGAGC EST sequence (targeted fragment marked with yellow): TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTCGTAAATCATGGAACAATTTGGTTTAAAAGATTCGTCTCGTAATTTACACACAAACTATGTAATTAGTTTTTTTCGTCTAATATTTAATACTTCGTACATGTCTTTAAAAAAAATTATCGGTGCATCTAAACACCCCCCCCAAAAAAAAAAAAAACAGGCCAACATACCATGCCATGACAATGCGGAATGCATCAGCCTCTGCCTGCACCAGGCATTTCTGCTCTGTGACTCTGTCCGAGTGAAGAAGACGACGACGACGACGACGACGCTTAAAAGCAAGTGACACATCTGCTGGCTAGATGCCGCTACATTTTACTGTTGCGGTTGGTGTTGGTGCCCGTGGTGGGCCCCATCTCCTTGGAGATATTCCGGAGCACGTACTTCTGGATCTTTCCGGTGGACGTCTTCGGTAACTCGTCGCGGAAGATCACCGTCTTTGGGACCATGTACCGCGGAATGAGCTCCCGGNTCCACGCGAACACGTTCGCCGCCCGTAACAGAGGCCCCACACCTGGTTGAAGCTTAACAAAGCGACAGGAGTTTTCCCCCAGAATCTTCCGGCCGCGACACAACGACGACTTGTTACCGCCGAGTGGGCGAATGACGGGATCACAATCACACGTTATTTTTTCCCCAGGAAAAGACG | |||||||||
gi|88847023|gb|CI001295.1|CI001295 CI001295 Oryza sativa (japonica cultivar-group) etiolated shoot Oryza sativa Japonica Group c CACGAGACGAATCTTTTGAGC EST sequence (targeted fragment marked with yellow): TTTTTTTTGTAGCTAATTAATCCATAATTATCAAAAGTTTACTGTAGCATCACATTGTCAAAATCATGACATAATTAGACTCAAAAGATTCGTCTCGCGAATTAGGTCCAAGCTTATGGAATAGGTTTTGTAATTAATGTATGTTTAATACTCCAAATTAGTGTCCAAATATCCGATGTGACATGGACTTGGAATAAGTCCCTGGAAACCAAACAGCCCCTCAGCAGCTCCAAGGTCACCGGATTTGCCTTCTACAGTTTGTTTTCTTCCACTGGCAACCTTTATTTTTTTTTAATGTGTGGCCCGTCTTTCCCTCCTTTGCCTGCCTGCCAATTCCCCCAGGCTCGCCACCCTGGCCGATCCGTGACCCAACCACCGCACCACCTCCACCTTACATTTTGCTGGATGCTCGAGCAGTCGGCGCAAAAGCTCTCCACCGACGAATCTCGCCGCCCGTTGGATCTAGCAGCAGCATGTGGAGTTGGGGCAAGTGGGTGTCGGAGATCTGAGAGCTGCGCAAGAACTCGCGCATCTGGCTC | |||||||||
gi|88991781|gb|CI034919.1|CI034919 CI034919 Oryza sativa (japonica cultivar-group) etiolated shoot Oryza sativa Japonica Group c CACGAGACGAATCTTTTGAGC EST sequence (targeted fragment marked with yellow): AGCAGAAGTCGCGGATTGCTTAGCAGCTCCAAATCATCAAATTTGCTGGCAATCAGAACAGCGAGATAGCAAAAGTCGCCGGATTGCTTAGGGGGTGTTTAGATGGGGCTAAAACTTTTTAGCCCAAGTCACATCAGATGTTTGAACGCTAATTTAGAGTATTAAACATAGACTAATAAAAAAACTAATTTCATAAATGAGAGCTAATCCGCGAGACGATTTTTTTAAGCCTAATTAATCCATAATTATCAAAAGTTTACTGTAGCATCACATTGTCAAAATCATGACATAATTAGACTCAAAAGATTCGTCTCGCGAATTAGTCCAAGCTTATGGAATAGGTTTTGTAATTAATGTATGTTTAATACTCCAAATTAGTGTCCAAATATCCGATGTGACATGGA | |||||||||
gi|44676617|gb|CR290051.1|CR290051 CR290051 Oryza sativa library (Han B) Oryza sativa cDNA clone y765b01p5, mRNA sequence CACGAGACGAATCTTTTGAGC EST sequence (targeted fragment marked with yellow): TTTCGTATTTACTCAATCATGTAGTGTGGAGTAGCTAACTTCATTTGCCAATCGGCAGACTAAGACCTCGTTTAGTTGGAAAAAAATTTTAGGTTTAGTTATCACATCGAATATACGGATACATATTTAAAGTATTAAAAGTACTCTAATAATAAAATAAATTAAAATAAATTACAGATTCGGCCAGGAAACTGCGAGACGAATTTATTAAGCCTAATTAATCTGTCATTAGCAAATGTTTATTGTAGCACCATATTATCAAATTATGGCGTAATTAGACTTAAAAGATTCGTCTCGCAATTTACACGCAAACTGTGTAATATATATATTTTTTCACATTTAGTACTTCATGTATGTGTCCGAACATTCGATTAGATGAAGGAAAGACTTTTTTTTTTAACTAAACGAGGCCCAAACAAAGATGCAAAAGGAACATAGGTGGAGCCAGTAGCACAAAGCATGACACACACGGTGATGTCGTTCTGAAAAATATCAACAATTGAACACGCTTGGGAGAGCTTGTACTGCCACTATATACCATATCTCTGTCCCGTAAAATCTCGAACGAAAATTGATGCTATGGTAGGTTCAATTGGTATGGATACTTAAGGGGGTTAAGTCTAATGGGTTTCCAAAAAATTTGGCAAATCTTTTTTATACAGACAT | |||||||||
gi|86499804|gb|CI142437.1|CI142437 CI142437 Oryza sativa (japonica cultivar-group) mixed shoot (Normalized Library) Oryza sativa CACGAGACGAATCTTTTGAGC EST sequence (targeted fragment marked with yellow): TTTTTTTTTTTTTTTTTTTTGATCAAATGTTCACGGACGCTGCTCAGGCGATTTGTCTTGTGAACGAATGCTCGATGCAGATCAAATATGAAATAATAAGACTTGCTGACACACTCGAGTAATGACCCTCTACACATTGCAATAGATATGAAGACATGCATGTGTTCTCAGTTCTCACTCACAAAAAAGCACCATTCGCATCCTAGGCCTTCACGCCAAGCATATAAAGTGCAATATGAAGATTTAATCTTCACCTAGAATTTCAACGACGACGGATACTAAACGGTACAAAAGTAAACAATAATAAGGCTTCACATAAGCCACATCAGGTCCTAAGCTCATTATTTAAGCAAGTCAGTGCCCACTTTAGTACTGCCCTCCATAGCCTCGGTTGCCATCACCATAGCCTCCTTGGTTACCATAACCACCGCCACCACCACCATACCCGCCGCCACCTCGGTTCCCTGGAGGTCTCTCATTCGCGAAGTTCACGCGGATACTCCGTCCCTCAAGTTCCTTACCGTCCATGGCATCCATGGCACTCTTGGGCATCATCGCCATTGGCAAAGCTAACAAAGCCAAACCCTCTTGACCTTCCAG | |||||||||
gi|58688733|gb|CK077420.1|CK077420 81832rsicen_9419.y1 Oryza sativa cv. LYP9 booting whole plant cDNA library Oryza sativa Indic CACGAGACGAATCTTTTGAGC EST sequence (targeted fragment marked with yellow): ACTAGTGGATCCCCGGGCTGCAGGCCCCCCCCCCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGGTCAAATCATGGCGTAATTATGCTCAAAAGATTCGTCTCGCAATTTACATGCAAACTGTGTAATTGTTTTTTTCCCCCACATTTAATGCTCCATACATGTGTCCAAACATTTGATGTGACGTTTGAGATCTAAACAAGGCCTCACACAAGAAATCAATTACTTTGTAGATCGTAACTAGCTGCCCTAGCTAGTCATCGCCTGCCGTGGACATGGCAAAGCGTTCGCCCGAATATGTCCATTGTGAAGTTGCTATACGAGGTTGATCCAGGCACCAACGATTTGCCCGTCTATTGTCACCCAGTCAACGCCTATTGCTGCTGGTTGTTCATGCCATTCATCAACCAAACCCCTAACAGGTTGGCAATCCTCAAAACATCTGAGCCTCTTGAACTGCATTTCTCAGTTCTGACAAACACCGTTCTGATACCATCTTTTCTTGTTCACCACTAAGACAGCAGCTGGCCACCCTTTCATATTCCTGTTGAGCACGATGTGCAGGGTTTAGCAAAACACGATCATTCTCA | |||||||||
gi|66927030|gb|CX113878.1|CX113878 EI084J12 A normalized whole-life-cycle cDNA library of rice Oryza sativa Indica Group cDNA cl CACGAGACGAATCTTTTGAGC EST sequence (targeted fragment marked with yellow): TGCTCCGTCAGGCCGGTCGGAATCCCGGGCGACCACGCGTCCGATCTTGTTCACCTCACTCGTAGTGGCTATGAAAATGAGATAGTGTAGAAAATGTACAGAAGCTAAGGCCCTGTTTAGTTTCCATGAAAAAAAACTTTTCACCTTGTCATATCAAATGTTTAAACACATGCATGAAGTATTAAATATAGAAAAAAAACATTAATTACATAGATTGTGTGTAAATTGTGAGACAAATATTTTAAGCCTAATTACGTCATGATTGGATAATGTAGTGCTACAGTAAACATTTGCTAATGACAAATTAATTAGGCTTAATAAATTCGTCTCGTAGTTTACAAACGAAATCTGTAATTTGTTTTTATCATTAGACTACGTTTAATACTTTAAATATGTGTCCGTATATCTGATGTGACATATCAAAACTTTTCATCCCTGAAAAAGAGGACCTAAATGTGTCCGGCTGATTTTGTTTTATCTTAAGGGAATTGTATTCTGCTGGCTTTTTTTTTTAATAATGCATTAAACCGGCCTCTGCAGAACTTCGCCATTCTGTGCACTGCTTCTTTTTCTCTGTATATCTTCTCTGATTTGGGAAATGAAGAAGCAGGCTTCTGTAGTGTTCAAAGCTGGACTGTTAGGTGACCAACTTTCAGCATCTGAGAAAATCCCCCTGGCAAGAAATCTCCAAGACCCATTGAAGAAATCACTGCAGGAATTATCGCCAAAGGATAATTACTCCCACAAATTTTGCCCATGTTTAAGGAATCACCCATGCGAATGAGTAAAGTGAGGCCTTAAACGGCGGCCCATTAACTGATCACTATCGTACTGTCGACGACAGTAAGCTCGAAATTTCTAACAAAAAACAACAAACGGGCAAAAACAAAAAGGGAAAAACATATGAAATAACGCGCAAGGAAAACAATACACGTAACAACCGTACATCACCACACTCCTTTAG | |||||||||
gi|88464219|gb|CI532154.1|CI532154 CI532154 Oryza sativa (japonica cultivar-group) 1 day after pollination pistil Oryza sativa J CACGAGACGAATCTTTTGAGC EST sequence (targeted fragment marked with yellow): AGGTTAAATTTGTACTTCCATAGGAAAACCTCCACGTTTAGTTCCCAAAAAGTTTTTCTCAAAAACATCACATCGAATCTTTAAACACATGCATGGAACATTAAATGTAGATTAAAAGAAAAACTAATTGCACAGTTAGAGAGGAAATCGCGAGACGAATCTTTTGTGTCTAATTAGTCCATGATTAGCCATAAGTGCTACAGTAATCCACATGTGCTAATGGCGGATTAATTAGACTCAAAAAATTCGTCTCGCGGTTTCCAGGCGAGTTATAAAATTAGTTTCTTCATTCGTGTCCGAAAACCCCTTCCGACATCCGGTCAAACATCCGATGTAATACCCAAAANTTTTCTTTTCGCGAACTAAACAGGG | |||||||||
gi|88464529|gb|CI534666.1|CI534666 CI534666 Oryza sativa (japonica cultivar-group) 1 day after pollination pistil Oryza sativa J CACGAGACGAATCTTTTGAGC EST sequence (targeted fragment marked with yellow): GCTTACAAAACTAATTCAATAAATGAAAGCTAATTCGCGAGACAAATTTTTTAAACCTAATTAATTGATAATTAGAGAATGTTTACTGTAGCATCACATAAGCTAATCATGGATTAATTAGGCTCAATATATTCGTCTCGTGAATTAGTCCAAAATTATTGATGAGTTTTTATTAATAGTCTACGTTTAATATTTATAATTAGTGTCCAAACATCCAATGTGATAGGGACTTAAAAACAGGGCCCAAGCACACCATAGAAAAAAGACGCCCCACATCACGGTTGCAGACAAAGTTGCAGATTCCAGCAATGACGCAATTAAAACCGAAAATTATCTCTCAACCATCCATTCGATCCATCAANTCATGCGGG | |||||||||
gi|88243810|gb|CI242932.1|CI242932 CI242932 Oryza sativa (japonica cultivar-group) Shoot and root of germinating seeds Oryza sat CACGAGACGAATCTTTTGAGC EST sequence (targeted fragment marked with yellow): TTTTTTTTGCAATCAACAGTAAAAGAAATTCATTAGAATGAAAATTACAGTGTTACTTAGGGCCCGTTTAGTTCCCAAAATTTTTTCTCAAAAACATCACATTGAATCTTTTGACACATGTATGAAGTATTAAATATAAATTAAAAGAAAAAACTAATTGCACAGTTATGGAGGAAATCGCGAGACGAATCTTTGAAGCCTAATTAGTCCGTGATTAGCCATAAGTACTACCGTAACCCACATGTGCTAATGATGGCTTAATTAGTCTCAAAAGATTCGTCTCGCAGTTTTCAGGCGAGTTCTGAAATTAGTTTTTTCATTCGTGTTCGAAAACCCCTTCCGACATCCGGTCAAACGTTCGACATGACACCTAAAAATTTTCTTTTCCCCAACTAAACATAGAGGAAAGAAAGAGCAACCTCCATTACATTACATGATTACAATGAATTAAACATACTAACGAGTCAGTGATCAGCAGTGGAGTTAGGATTAGTAAGGTAGTGCAAGCATGGCAGGCGAT | |||||||||
gi|88738976|gb|CI762484.1|CI762484 CI762484 Oryza sativa (japonica cultivar-group) root of seedling gamma-irradiated(45Gy), immi CACGAGACGAATCTTTTGAGC EST sequence (targeted fragment marked with yellow): GAATTACAGAATCCGTCAATAAACCGCGAGACGAATTTATTCAGCCTAATTAATCCGTCATTAGCAAATGTTACTATAGTCTGTAGCACCACATTGTCAAATCATAGAGTAATTAGGCTTAAAAGATTCGTCTTGTAAATTAGTTGCAATCTGCAATTAGTTATTTTTTAGCCTATATTTAATACTTCATGCAGGTGTTCAAACGTTCGATGTGACAGGGCGAAACATTTTGAGATGGGATCTAAACATGGCTATAGTTTCAATTGTGTTGCATTGCAATATGGGACATTTTGGAATTAGGGCCAAAATGAGTTTGAGCCCTTCAATTTTTTAACATCATATAAATATTGTGAAAGTTGGTTCAGTGACATATAA | |||||||||
gi|86416653|gb|CI030664.1|CI030664 CI030664 Oryza sativa (japonica cultivar-group) etiolated shoot Oryza sativa Japonica Group c CACGAGACGAATCTTTTGAGC EST sequence (targeted fragment marked with yellow): TTGTCACGTTGATACGTTTGACCGGATGTCAAAAGGGATTTTCGGTCACGAATAAAAAAACTAAAACCACGAGACGAATCTTTTAAGCCTAATCAATCTGTCATTAGCACATGTAAGTTATTGTAGCACTTATAGTTAATCATGGCCTAATTAGACTCAAAAGATTCGTCTCGCGATTTATATGCAAACTATGCCATTAGTTTTTTATTTATCTATATTTAATGTCCTATATATGTGTCTAAAGATTTGATGCGATGTTTTTGAGAAAAGTTTTTGGAACTAAACACGCCCTTAATGGCTAGAGCCAGGTGCTACTGCTTCGCAGGTACGCCATGAACATCACCATGTCCGAGTCCGAATCCTCCTCGCCGTCGCCGTCGCCGTCGTCCGCCGCCGCCGACGGGCTCTGCAGGAGCCGGCAGCGGCAGAGCGGGCACG | |||||||||
gi|86434766|gb|CI105999.1|CI105999 CI105999 Oryza sativa (japonica cultivar-group) Panicles less than 5cm stage Oryza sativa Jap CACGAGACGAATCTTTTGAGC EST sequence (targeted fragment marked with yellow): AAAATACTACTACTTTTCACTGAAACAGTGTAGCACACGGATTGACATGCAAAGATTCCTATAGCCAAAACTTTTCCAAACTACTGCTATTATTCACCGAAACCGACTGCTATGACTGTCACCGAAACCGACTGCTTTGACGATCGGATTCACATCCCACAGCCAACAACAAATCAAGTCAATAGCAAACAACATGCAACCAGTGCCAATCATCAAATTTGCTGGCAATCAGAACAGCGAGATAGCAGAAGTCGCCGGATTTGCTTAGCAGCTCCAAATCATCAAATTTGCTGGCAATCAGAACAGCGAGATAGCAAAAGTCGCCGGATTTGCTTAGGGGGTGTTTAGATGGGGCTAAAACTTTTTAGCCCAAGTCACATCAGATGTTTGAACGCTAATTTAGAGTATTAAACATAGACTAATAAAAAAACTAATTTCATAAATGAGAGCTAATCCGCGAGACGATTTTTTTAAGCCTAATTAATCCATAATTATCAAAAGTTTACTGTAGCATCACATTGTCAAAATCATGACATAATTAGACTCAAAAGATTCGTCTCGCGAATTAGTCCAAGCTTATGGAATA | |||||||||
gi|86528181|gb|CI168387.1|CI168387 CI168387 Oryza sativa (japonica cultivar-group) shoot and callus Oryza sativa Japonica Group CACGAGACGAATCTTTTGAGC EST sequence (targeted fragment marked with yellow): TACTTTTTTTTTTCTTTTTTCAAAATTATTTTTTAAATTTATTTGAATTTAAGGAGGTTACCGCGGTATTTATATTACCGTACCCCCGCAGTAAGCCCGATAACCCTATCGGCGGTAACGTAAACCCTGGCGGAGACATGGGCTTCTTGAGCACAGAGACGTGCACCGCACAACGAAGCAGTCATCGAACCTCTCCACGGCCTCCTTCCTGAGACTAAGGGTGGTGTTTGGATCCAGAGACTTAACTTTAATCTCTGTATTTAGATACTAATTTAGAGTATTAAATATAGACTACTTACAAAACTAATTACATAAACGAAAACTAATTTGCAAGACAAATTTTTTAAGCCTAATTAATCCATAATTAGAGAATGTTTATTGTAGTATCACATAGGCTAATCATAGATTAATTAGGCTCAATAGATTCGTCTCGCGAATTAGTCCAAGATTATGAATGGGTTTTATTAATAGTCTACGTTTAATATTTATAATTATTATCCAAACATCGAATGTGAT | |||||||||
gi|86259685|gb|CI065558.1|CI065558 CI065558 Oryza sativa (japonica cultivar-group) BAP treated callus Oryza sativa Japonica Grou CACGAGACGAATCTTTTGAGC EST sequence (targeted fragment marked with yellow): CGAACACAAATTAAAAAACTAATTTCATAACTCGCCTGGAAACCGTGAAACGAATCTTTTGAGACTAATTAATCCACCATTAGCACATGTGGGTTACTGTAGCACTTATGGCTAATCATGGACTAATTAGGCTCAAAAGATTCGTCTCGTGATTTCCATCATAACTGTCCAATTAGTTTTTTTTATCTATATTTAATGCTCCATACATGTCTACAAGGATTCGATGTGATTTTTTTGAGAAAAACTTTTTGGGAACTAAACATGCCCTAAATGTTCAGTTTACTGTGAACAGGAACGCGAAAACGACCGCTACACTTCAACAACGTCAACCTCCGACAACTCAACGCTGGAGACACCATCGGGGCAGAGGATCGACAGCACGCTGACCGTCTTGTGCTGTGGAATCTGACTTATCTTGAGCCGATCTTCATCGCTCAATTGCCAATCGAAGATATCGATGTTCTCCTTAAGCCTCTCCCTTTTCGTACTCGTGGTCACCATGCTTGCTCCTTGCTCGTAGATCCACCTAAGTGAGATCTGAGCC | |||||||||
gi|88437014|gb|CI523964.1|CI523964 CI523964 Oryza sativa (japonica cultivar-group) after pollination embryo Oryza sativa Japonic CACGAGACGAATCTTTTGAGC EST sequence (targeted fragment marked with yellow): AAACAAAACTGAGGTTGTGTTTAGATTAGGGGTGTAAAGTTTTGGCGTGTCACATCGGATATACGGGCACACATTTGAATATTAAACGTAGTCTAATAACAAAACAAATTACAAAATCCGTATGTAAACCGCGAGACGAATTTATTAAGCCTAATTAATCCGTCATTAGCAAATGTTTACTGTAGCACAACATCATCAAATCATGGCGTATNTAGGCTTAAAAGATTCGTCTCATAATTTACACGCAATCCGCGTAATTAATCATTTTTCCGTTTATACTCTCTCTTTCATATAGATGTTAATACTCTGTAAATATGTGACANTGCGCTCGAACCCCCCCTCTCTTCCAGTAGCGCACACCTGTGCGGCGC | |||||||||
gi|44665974|gb|CR279408.1|CR279408 CR279408 Oryza sativa library (Han B) Oryza sativa cDNA clone y737a05p3, mRNA sequence CACGAGACGAATCTTTTGAGC EST sequence (targeted fragment marked with yellow): TTTTTTTGTTTTTTTTTTTTTTTTGCACAAATGAAAAAACTAATTTCATAACTCGCCTGGAAACCGCGAGACAAATTTATTAAGCCCAATTAATCCGTCATTAGCACATGTGGATACTATAGCACTTATGGCTAATCATGGACTAATTAGTCTTAAACGATTCATCTCGTGATTTCCATNGCAAACTGTGCAATTAGTTTTTTATTTTTATCTATATTTAATACACCATGTATGTGTACCAATATTTGATGTGATGTTTTTGAGAAAAAAAATTTACGAACTAAACAAGGGCTAAACAAAAAAAAAGTCCAAAATATAGTCTCCGGTCTCTCCCACCACCTTCATGGCATTCAAGCCTCACCTACTGGCGGCTGCTGGACACCGATCCTCCGCCCCGGACGATCCCCTGCCGATAACCCGCCAGAACCTCTGGGCCCACCCACGCCACCCCATCGCGGAACCACCTCACTCCCCACTCGTCCAGTGCACGGCGTCCCGCACGTGCACCCTCTCTCCCCGGACACAACCGCGCCTGAACGCCCCTGGCGCCCTCCCCCCCCACAGCATGGCCCGCGGGCCAAAACCCCCGCGGCCCGCCCCCCTCACCCACGCCCGACCACAAGGAAGCCCACCACCTCACCCCGACACCCACAACCCAGCCCC | |||||||||
gi|87032096|gb|CI362176.1|CI362176 CI362176 Oryza sativa (japonica cultivar-group) flower Oryza sativa Japonica Group cDNA clone CACGAGACGAATCTTTTGAGC EST sequence (targeted fragment marked with yellow): GGACGAAAAAAACCAATTGCACAGTTTGCATGTAAATTGCGAGACGAATCTTTTGAGTCTAATTACGTCTTGATTTGACAATGTGGTGCTCAAGTAAACATTTGATAATGACGAATTAATTAGGCTTAATAGATTCGTCTCGCAGTTTATAAGCGAAATGTGTAGTGTGTTTTGTTATTAGTCTAGATTTAATACTTCAAATGTGTCGGTATAGTTCAAAAATTTTTTTTTGGCACACGAACTAAACACAGCCAAAGACAACAAAATTATTCAGCAATGTTATCTGTAGAAGAAATGATGCAGGATTTGGCAGTGCTAAATTCGGTTTGAATCCCTCCCAAATATGAACCTCCGAGTCAAGTCGGATACCACCAGCATCCGTGTGCGCCAAGTCACTTGTTTGCTTGCATATACAGAGTACCAGAGCCACTGAGTGCTATGGCC | |||||||||
gi|88507094|gb|CI434600.1|CI434600 CI434600 Oryza sativa (japonica cultivar-group) leaf of seedling gamma-irradiated (9.5min), a CACGAGACGAATCTTTTGAGC EST sequence (targeted fragment marked with yellow): GTCCACCTGTAAACCGCGAGACGAATTTATTAAGGCTAATTAATCCGCCATTAACAAATATTTACTGTAGCACCACATTGTCAAATCATGGCGTATTAGGCTCAAAAGATTCGTCTCGCAATTTACATGCAAACTGTGCAACTGGTTTTTTTTCGTCCACATTAATACTCTATGCATGTGTCCAAACATTTGATGTGACGGAATTTNTGAAAGTTCGAAGGGAACTAATCACAGCCATAGATTACATTTACCATGCTGCTAGGATTAATCATGTCATGGTTTTTGCTCTCAACAAATCAGTGATGGTGGTGGATAGCAGTCAAAATTGGGGGATCAGCATAAGGACCATAGAGCCACCCCTTGGCAACGAACCGGTTGATGGCCTCCGTGTAGTGAATCCCATCCCAGGATATTGAG | |||||||||
gi|88739692|gb|CI763200.1|CI763200 CI763200 Oryza sativa (japonica cultivar-group) 2 weeks seedlings root of seedling UVC irradi CACGAGACGAATCTTTTGAGC EST sequence (targeted fragment marked with yellow): TGTAGCAAAATTTGCCGGCAAGGTATTGGTTTCTAGAATAATTTTTTTAAGATCTATTTATAGAATAAGATTTTTAAAAGGACCAAAAGTTAGGCACTGATTAGTTCCCAAAACAAAAATTTTCATGCTATCACATCGAATGTTTGGACACATGCATGGAGTATTNAATGTAGGAAAAAAAGCAATTACACAGATTGCGTGTAAATTGCGAGACGAATCTTTTAAGCCTAATTGCGCCATGATTTAACAATGTGGTGCTATAGTAAACATTTGCTAATGATGGATTGATTAGGCTTAATAAATTCGTCTCGTAGTTTCTTGGTGGAATCTGTAATTTGTTTTGTTATTAGACTGCGTTTAATACTTTAA | |||||||||
gi|88728238|gb|CI751748.1|CI751748 CI751748 Oryza sativa (japonica cultivar-group) library (Kikuchi S) Oryza sativa Japonica Gro CACGAGACGAATCTTTTGAGC EST sequence (targeted fragment marked with yellow): GTGTGAGCAATGCAAGTGCCCTCCACTCTTTGACTTAAATTTGGCTGGTGGGCTATCTCTATTCATGTCTCCTTGATTTGCCTTTTCACTATACCTTCTTTAGGGGGTGTTTAGATGAGGGGTGTAAAGTGTTGGCGTGTCACATCGGGTATTATATATGGTATCGCATGGGGTGTTCGGGCACTAATAAAAAACTAATTACAGAATCCGTCAGTAAACCCGCCAGACGAATTCATTAAGCCTAATTAATCCGTCATTTGTAAATGTTTACTGTACCACCACATTGTCAAATCATACAGCAATTAGGCTCAAAAGATTCGTCACGTAAATTAGTCGCAATCTGTGTAATTAGTCTTTC | |||||||||
gi|88503608|gb|CI431114.1|CI431114 CI431114 Oryza sativa (japonica cultivar-group) 4th leaf leaf 1mM ACC(1-aminocyclopropane-1-c CACGAGACGAATCTTTTGAGC EST sequence (targeted fragment marked with yellow): GAATGGAAAAACTAATTTCATAACTCGCCTGAAAACTACGAGACGAACTTTTTGAGCCTAATTAAACTGCCATTAGCACATGTAGGTTACTGTAACACTTATGGCTAATCATGGACTAATTAGGCTCAAAAGATTCGTCTCGCCATTTACATACAAATTGTGCAATTAGTTTTTCTTTTTATCTATATTTAATGCTCTATACATGTGTCCAAAGATTCGATGTGATGTTTTTGTGAAAAGTTTTTGGGAACTAAACAGGGCCAGGTCAGGCCAAATAATCTGAGTATGCAGCCATGTGGGGTTATTGTGCAGCAGCATAGAGACCCGGACGATCCTCCTCAGGTCATTCACAGTGCATCTCTGTGGCATTTGGCCTCAGCACAA | |||||||||
gi|29672217|gb|CB668492.1|CB668492 OSJNEd16F23.r OSJNEd Oryza sativa Japonica Group cDNA clone OSJNEd16F23 3', mRNA sequence CACGAGACGAATCTTTTGAGC EST sequence (targeted fragment marked with yellow): AGTCCATGATTAGCCATAAGTGTTACAGTAACCTACATGTGCTAATGGCAGTTTAATTAGGCTCAAAAAGTTCGTCTCGTAGTTTTCAGGCGAGTTATGAAATTAGTTTTTCCATTCATGTCTAAAAACCTCTTCCGACATCCAGTTAAATGTCTGATGTAACACCTAAAATTTTTTATTTCACCAACTAAACAGGCCCAATATTCCGCGATGGAGGACGGATCTATTGTTTGCGGAGACGTCAGCAGCCGCTGTTTTGCAGTCGTCTCGCCGTACTTTAGTACCAGCAATTGGATAGGGCCACCGCCAGGCGCCAGTTGAGCCTGGGAAAGCGGTGGGACGTACGTTTCTTCTTGAATGGCGTGGAGATGTGTTATGTGCTCAGATTATAATTCATCCTTCGGCACAAGACGCCAGCCATTATCTGTATCGCTGCATAAGCTCCAGCAGAACTGCAGAAGGACGGAAGAGCTTCCTGGGTCCCCGAGACGGTAAATCCTGATCCTATCATGTTCTTGGGTGGAAACAGCAGTTTTCTGATTGAGACAGCGAAGGTTCCTGGTGCCAAGAGTTGCAGTTACGGTGGATACGCATACTTCTTGTTTGATGATTCAAGCAAGAAGGATGTTACATTGTTACACGTGTTTACCAGTGAGATTTGTGTCGTGATGAGTTAGCGGTTATCGATGAGCTACCCAGTGAGTACACTAGGGAGTCGGTGTGGTTTGTGCCACTTTTTTTTTAACGACTTGCACGAGATGTTGCAAAGTTCTATTGATAGAGTAGGAAAAAAGTACAAGATTATAACCCTGGAGAGTCATAACTAGAAAAAAAG | |||||||||
gi|86896188|gb|CI330117.1|CI330117 CI330117 Oryza sativa (japonica cultivar-group) shoot Oryza sativa Japonica Group cDNA clone CACGAGACGAATCTTTTGAGC EST sequence (targeted fragment marked with yellow): GAAGTATTAAACATAGACTAATAACAAAACAAATTACAGATTCCGCATGTAAACTGTGAGATGAATTTATTAAGCATAATTAGTCTGTCGTTGGCAAATATTTACTGTAGCATAATATTGTCAAATCATGGCGTAATTATGCTCAAAAGATTCGTCTCGCAATTTACATGCAAACTGTGTAATTGTTTTTTTCCCCCACATTTAATGCTCCATACATGTGTCCAAACATTTGATGTGACGTTTGAGATCTAAACAAGGCCTCACACAAGAAATCAATTACTTTGTAGATCGTAACTAGCTGCCCTAGCTAGTCATCGCCTGCCGTGGACATGGCAAAGCGTTCGCCCGAATATGTCCATTGTGAAGTTGCTATACGAGGTTGATCCAGGCACCAACGATTTGCCCGTCTATTGTCACCCAGTCAACGCCTATTGCTGTTGGTTGTTCATGCCACTCATCAACCAAAC | |||||||||
gi|88273350|gb|CI388806.1|CI388806 CI388806 Oryza sativa (japonica cultivar-group) callus Oryza sativa Japonica Group cDNA clone CACGAGACGAATCTTTTGAGC EST sequence (targeted fragment marked with yellow): GACGAATTAATTAGGCTTAATAGATTCGTCTCGCAGTTTATAAGCGAAATCTGTAATCTGTTTTGTTATTAGTCTACATTTAATACTTCAAATGTGTCCGTATACTTCAAAAATTTTTTTTTGGCACACGAACTAAACACAGCCAAAGACAACAAAATTATTCAGCAATGTTATCTCTACAAGAAATGATGCAGCATTTGGCAGTGCTAAATTCGGCTTGAATCCCTCCCAAATATGAACCTCCGAGTCCAGTCGGATACCACCAGCATCCGTGTGCGCCAACTCACTTGTTTGCTACACAAAACATGGAGGAAAGAAACAAACTCTCAGGGTAGAATTGCAGCTAAACGAATTGTAGTAAGCTCAGAGGCATGATGCAAGAGATAAGGCTGTGAATGAAGTAGAGAGCAGTAGTAGAATGAGATGCCATGGTTGATTTCTTCAGAGT | |||||||||
gi|58664295|gb|CK052981.1|CK052981 54979rsicek_5818.y1 Oryza sativa cv. PA64s panicle ferile cDNA library Oryza sativa Indica Gr CACGAGACGAATCTTTTGAGC EST sequence (targeted fragment marked with yellow): GCACGAGGTCGGAATCGAATTATCCGATATACTAGTAGCAATATATTTCCATTTTGTTCCTCTTCTTCAGTTAATTAGTCTAGAATGGTAAGCTGTAATTTCTTGTGGGTAATACTAGTAGTATTATTATTCCTCATGCCTGTGCCAAAAAATTCCTTGTATAAATCAAGTTTACCTGAGTATGCTGTAAATTTGCACAAGGTGGAGTAGCACTAAGAGCTTGTTTAGTTCAAAAAAACATTATATCGAATCTTTAAATACATGCATAGAGCATTAAATATAGACAAATTAAAAAACTAATTGCACAATTTGTATGAAAATCGCGAGACGAATCTTTTAAGCATAATTAATCTATGATTAGCCATAATTGCTATATTAACTAATTAATTAGGCTTAATAAATTCGTTTTGTGGTTTTTAGGCGAGTTATGAAATTAGTTTTCTCATTCGTGTCCGAAAACCCCTTCCGACATCCGGTCAAACGTTCGATGTGATACCTTTAAACTTTTTTTTTCGCGAACTAAACACACCCTAAGTACCAA | |||||||||
gi|33824651|gb|CF338135.1|CF338135 JMT--08-N23.b1 AtJMT-overexpressing transgenic rice plasmid cDNA library (JMT) Oryza sativa J CACGAGACGAATCTTTTGAGC EST sequence (targeted fragment marked with yellow): GGACTGAGGAGTAGAAACATGATCGATGTATCAACCTCTGGCGATAGGTTCATAAGGATTTGATTCCCGATTGTCGTTGCTTTATGCAGAAGCTGGAGGCCTTGTTGGCATTTGTAGGTTGTTTAGGGCCTGTTTAGTTCGCGAAAAGAAAATTTTTTGATTGTCACATCGGACGTTTGACCGAATATCGGAAGGGGTTTTCGGACACGAAGGAAAAAACTAATTTCATAACTCGCCTGAAAACCACGAGACGAATCTTTTAAGCCTAATTAATTTGTCATTAGCACATGTGGGTTACTGTAGCACTTATGGCTAATTATTAACTAATTAGGCTCAAAAGATTTGTCTCGTGATTTCCCCCCTAACTTTGTAATTAGTTTTTTAATTTATCTATATTTAATATTTTATTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAC | |||||||||
gi|86506188|gb|CI148821.1|CI148821 CI148821 Oryza sativa (japonica cultivar-group) Panicles mixture of one, two, three weeks aft CACGAGACGAATCTTTTGAGC EST sequence (targeted fragment marked with yellow): TTTTTTTTTTGGTTTAAAAGATTCGTCTCGCAATTTATACACAAACTGTGTAACTAGTTTTTTTCGTCTAATATTTAATACTTCGTACATGCCTTAAAAAAAATTTATCGGTGGATCTAAACACCCCCCCCCCCCCTTCCCCCAATCAAACAGGCCATGGCTGGTGGTGCTGATATATCGACAGAAACATGCCATGCCATGACAATGCGGAATGCATCAGCCTCTGCCTGCACCAGACATTTCTGCTCTGTGACTCTGTCCGAGTGAAGAAGACGACGACGACGCTCAAAAGCAAGTGCCACATCTGCTGGCTAGATGCCGCTACATTTTACTGTTGCGTTTGGTGTTGGTGCCCGTGGTGGGCCCCATCTCCTTGGCGATATTCCGGAGCACGTACTTCTGGATCTTCCCGGTGGACGTCTTCGGTAACTCGTCGCGGAAGATCACCGTCTTTGGGACCATGTACCGCGGCATGCGCTCCCGGCTCCACGCG | |||||||||
gi|88513664|gb|CI441170.1|CI441170 CI441170 Oryza sativa (japonica cultivar-group) 4th leaf leaf 3mM SA(salicylic acid) for 1 da CACGAGACGAATCTTTTGAGC EST sequence (targeted fragment marked with yellow): GCTAAGGGCCTGTTTGGGAAACATGGATTTATTCCCCAAGTCCCTATCACATCGGATGTTTGGACACTAATTTAGAGTATTAAACATACACTAATTACAAAACCCATTCCATAACCTTGGACTAATTCGCGAGACGAATCTTTTGAGTCTAATTACGCCATGATTTGACAATGTGATGCTACAGTAAACTTTTCATAATTATAGATTAATTAGGCTTAAAAAATTCGTCTCGCAGATTAGCTCGCATTTATGAAATTAGTTTTTTTATTAGTCTATATTTAATACTTCAAATTAGCGTCCAAACATCCAATGTGACATGTACTTTAAAAAATAAACACCCCCTAAAATAGTGCCTCCCTTTACATTAGCTGACTTAGTAGAGTATGAACAGAGTTGTTTAAATGGACAC | |||||||||
gi|66924647|gb|CX111495.1|CX111495 EI061N08 A normalized whole-life-cycle cDNA library of rice Oryza sativa Indica Group cDNA cl CACGAGACGAATCTTTT-GAGC EST sequence (targeted fragment marked with yellow): TTCCCAAAAGTTTTTCCTAAAAACATCACATCGAATATTTGGATACACGCACGTAGCATTAAATATAGAGTAAAAGAAAAAAATAATTACATAGTTAGTAATCTTTTAGCCTAATTAGTTCATGATTAGCCATAAATGCTATAGTAGCCTACATGTACTAATGACGGATTAATTAGGTTCAAAAAGATTCGTCTCGCGGTTTCCAGGTGAGCTATGAAATTAGTTTTTTTATTTGTGTCTAAAAACCTCTTTCGACATTCGTCAAAGATCCGATGTGACACCGAAAAATTTTCGAACTAAACAGACCCTAATTACCGCGCTTGTACTTGACGCCATGTAGTAGTAACTATAGTTAAC | |||||||||
gi|88532865|gb|CI461312.1|CI461312 CI461312 Oryza sativa (japonica cultivar-group) young ear Oryza sativa Japonica Group cDNA cl CACGAGACGAATCTTTTGAGC EST sequence (targeted fragment marked with yellow): GGAAGCAACGCAGAGAATACACATCACGTTGATCAAATGTTCACGGACGCTGCTCAGGCGATTTGTCTTGTGAACGAATGCTCGATGCAGATCAAATATGAAATAATAAGACTTGCTGACACACTCGAGTAATGACCCTCTACACATTGCAATAGATATGAAGACATGCATGTGTTCTCAGTTCTCACTCACAAAAAAGCACCATTCGCATCCTAGGCCTTCACGCCAAGCATATAAAGTGCAATATGAAGATTTAATCTTCACCTAGAATTTCAACGACGACGGATACTAAACGGTACAAAAGTAAACAATAATAAGGCTTCACATAAGCCACATCAGGTCCTAAGCTCATTATTTAAGCAAGTCAGTGCCCACTTTAGTACTGCCCTCCATAGCCTCGGTTGCCATCACCATAGCCTCCTTGGTTACCATAACCACCGCCACCACCACCATACC | |||||||||
gi|88378088|gb|CI501357.1|CI501357 CI501357 Oryza sativa (japonica cultivar-group) 2 nuclei stage pistil Oryza sativa Japonica G CACGAGACGAATCTTTTGAGC EST sequence (targeted fragment marked with yellow): GTCAAATCATGGCGTAATTATGCTCAAAAGATTCGTCTCGCAATTTACATGCAAACTGTGTAATTGTTTTTTTCCCCCACATTTAATGCTCCATACATGTGTCCAAACATTTGATGTGACGTTTGAGATCTAAACAAGGCCTCACACAAGAAATCAATTACTTTGTAGATCGTAACTAGCTGCCCTAGCTAGTCATCGCCTGCCGTGGACATGGCAAAGCGTTCGCCCGAATATGTCCATTGTGAAGTTGCTATACGAGGTTGATCCAGGCACCAACGATTTGCCCGTCTATTGTCACCCAGTCAACGCCTATTGCTGCTGGTTGTTCATGCCATTCATCAACCAAACCCCTAACAGGTTGGCAATCCTCAAAACATCTGAGCCTCTTGAAC | |||||||||
gi|88438086|gb|CI536245.1|CI536245 CI536245 Oryza sativa (japonica cultivar-group) 4 nuclei stage anther Oryza sativa Japonica G CACGAGACGAATCTTTTGAGC EST sequence (targeted fragment marked with yellow): GCCAAAAACGTCACATCGAATGTTTGGACACATGCATAGAACATTAAATGTGGACGGAAAAAAAACCAATTGCACAGTTTGCATGTAAATTGCGAGACGAATCTTTTGAGCCTAATTACGCCATGATTTGACAATGTGATGCTACAGTAAACATTTGCTAATGACGGATTAATTAGGCTTAATAGATTCGTCTCGCAGTTTACAGGCGGAATATGTAATTTGTTTTGTTATTAGTCTACGTTTAATACTTCAAATGTGTGCCCGTATACGTCAAAAAAAATTTGGACAGTGAACTAAACACAGCCAAAGTTTTTTGCCGGGTAAACACAGCCAAAGTTTTAAAGTGGAAACGTAGATTGTCTATTAGTCTATGACCAGCTACTATAATTAAAG | |||||||||
gi|88246675|gb|CI246524.1|CI246524 CI246524 Oryza sativa (japonica cultivar-group) Shoot and root of germinating seeds Oryza sat CACGAGACGAATCTTTTGAGC EST sequence (targeted fragment marked with yellow): AATTGACTACATGCATGCATGCCTTATATTATGAAACATCTAAAAAAATGGTTGTGCCTTATATTATGGAATGGAGGGAGTATTTGATATTAGGTCCTTCCCTAATATTCACGTTTTTTTATAATGAGCCGAGAGAGTTTGAACCTGGCAACAAAGGGCCTGTTTAGTTCGCGAAAAAAAAAAAATTTTGGATGTCACATCGGATGTTTGACCGGATATTGGAAAGAATTTTTGGACACGAATAAAAAAACTAATTTCATAACTCGTCTGGAAACCGCGAGACGAATCTTTTGAGCCTAATTAATCCGTCATTAGCACATGTGGGTTACTGTAGCACTTATGGCTAATCATGGACTAATTAGGCTTAAAAGATTCGTCTCGTGATTTCCTGCCTAATTGTGCAATTAGTTTTTTTATTTACCTATATTTAATACTTCATGCATATTTTCAAAGATTCGATGTGATGTTTTTGGAAAAAAAATTTGGGGAACTAAACGGGGCCCAAATTATGCAGGAGCATGTTTAATCATCCCA | |||||||||
gi|38478922|gb|CF963055.1|CF963055 13233rsiced_3353.y1 Oryza sativa cv. LYP9 trefoil whole plant cDNA library Oryza sativa Indic CACGAGACGAAT-CTTTTGAGC EST sequence (targeted fragment marked with yellow): CTAGTGGATCCCCGGGCTGCAGGTTTGCCTAAGGGGTGTGTTATCAGCAGTGAAAAGCTTTGGCGTGTCACATCGGATATATGGACATAAATTGAAGAGTATTAAAATGTAGTTTGATAGCAAAACTTCCGTCTATAAATTACGAGACGAATTTATTATTTAATTAATCCATCATTAGCAAATATTTACTGTACCACCACATTGTCAAATCATAAAGCAATTAGGCTTAAAAGCATTCGTCTCGTAGTTTACACACAATCTGTGTAATTAGTTATTTACATTTAATGTGACTGAGTGAAAAATTTTTGCAAAAAAAAAAAAAAAAAAAAAAAAACAAAAAAAAAAAACAAAAACAACAC | |||||||||
gi|89163282|gb|CI100172.1|CI100172 CI100172 Oryza sativa (japonica cultivar-group) Panicles one day after flowering Oryza sativa CACGAGACGAATCTTTTGAGC EST sequence (targeted fragment marked with yellow): TTAGGTTTAAAAGATTCGTCTCGCAATTTATACACAAACTGTGTAATTAGTTTTTTTCGTCTAATATTTAATACTTCGTACATGCCTTAAAAAAAATTTATCGGTGGATCTAAACACCCCCCCCCCCCCTTCCCCCAATCAAACAGGCCATGGCTGGTGGTGCTGATATATCGACAGAAACATGCCATGCCATGACAATGCGGAATGCATCAGCCTCTGCCTGCACCAGACATTTCTGCTCTGTGACTCTGTCCGAGTGAAGAAGACGACGACGACGCTCAAAAGCAAGTGCCACATCTGCTGGCTAGATGCCGCTACATTTTACTGTTGCGTTTGGTGTTGGTGCCCGTGGTGGGCCCCATCTCCTTGGCGATATTCCGGAGCACGTACTTCTGGATCTTCCCGGTGGACGTCTTCGGTAACTCGTCGCGGAAGATCACCGTCTTTGGGACCATGTACCGCGGCATGCGCTCCCGGCTCCACGCGACCACGTCCGCCGC | |||||||||
gi|89186165|gb|CI048034.1|CI048034 CI048034 Oryza sativa (japonica cultivar-group) cold treated callus Oryza sativa Japonica Gro CACGAGACGAATCTTTTGAGC EST sequence (targeted fragment marked with yellow): TTTTTTTTGCCCAAAGAAAGTTCACCACATTATTATTCAACAGTAGTATGTTACAAAGGCATGGTTTATATTCAAACTTTTTTCTTCAAACTTTCAACTTTTCCGTCACATCAAATGTTTGAATACATATATGGAGCATTAAATATGGACGAAAAAAACCAATTGCACAGTTTGCATGTAAATTGCGAGACGAATCTTTTGAGTCTAATTACGTCTTGATTTGACAATGTGGTGCTCAAGTAAACATTTGCTAATGACGAATTAATTAGGCTTAATAGATTCGTCTCGCAGTTTATAAGCGAAATCTGTAATCTGTTTTGTTATTAGTCTACATTTAATACTTCAAATGTGTCCGTATACTTCAAAAATTTTTTTTGGCACACGAACTAAACACAGCCAAAGACAACAAAATTATTCAGCAATGTTATCTCTACAAGAAATGATGCAGCATTTGGCAGTGCTAAATTCGGCTTGAATCCCTCCCAAATATGAACCTCCGAGTCCAGTCGGATACCACCAGCATCCGTGTGCGCCAACTCACTTGTTTGCTTGCATATACAGAGTACCAGAGCCACTGAG | |||||||||
gi|88202558|gb|CI200913.1|CI200913 CI200913 Oryza sativa (japonica cultivar-group) Panicles mixture of one, two, three weeks aft CACGAGACGAATCTTTTGAGC EST sequence (targeted fragment marked with yellow): TTTTTTTTTTTTAGCAAAAGTCGCCGGATTGCTTAGGGGGTGTTTAGATGGGGCTAAAACTTTTTAGCCCAAGTCACATCAGATGTTTGAACGCTAATTTAGAGTATTAAACATAGACTAATAAAAAAACTAATTTCATAAATGAGAGCTAATCCGCGAGACGATTTTTTTAAGCCTAATTAATCCATAATTATCAAAAGTTTACTGTAGCATCACATTGTCAAAATCATGACATAAATAGACTCAAAAGATTCGTCTCGCGAATTAGTCCAAGCTTATGGAATAGGTTTTGTAATTAATGTATGTTTAATACTCCAAATTAGTGTCCAAATATCCGATGTGACATGGACTTGGAATAAGTCCCTGGAAACCAAACAGCCCCTTAGCAGCTCCAAGTCACCGGATTTGCCTTCTACA | |||||||||
gi|88556195|gb|CI486507.1|CI486507 CI486507 Oryza sativa (japonica cultivar-group) 2 weeks after flowering ear Oryza sativa Japo CACGAGACGAATCTTTTGAGC EST sequence (targeted fragment marked with yellow): CAGAGAATACACATCACGTTGATCAAATGTTCANGGACGCTGCTCAGGCGATTTGTCTTGTGAACGAATGCTCGATGCAGATCAAATATGAAATAATAAGACTTGCTGACACACTCGAGTAATGACCCTCTACACATTGCAATAGATATGAAGACATGCATGTGTTCTCAGTTCTCACTCACAAAAAAGCACCATTCGCATCCTAGGCCTTCACGCCAAGCATATAAAGTGCAATATGAAGATTTAATCTTCACCTAGAATTTCAACGACGACGGATACTAAACGGTACAAAAGTAAACAATAATAAGGCTTCACATAAGCCANATCAGGTCCTAAGCTCATTATTTAAGCAAGTCAGTGCCCANTTTAGTACTGCCCTCCATAGCCTCGGTTGGCATCACCA | |||||||||
gi|88489019|gb|CI426290.1|CI426290 CI426290 Oryza sativa (japonica cultivar-group) germinating seeds Oryza sativa Japonica Group CACGAGACGAATCTTTTGAGC EST sequence (targeted fragment marked with yellow): GTAAGCTGAAACATGAAAATTGAGGTTGAACAAGCATCTCGCTTACAAATCATACCATTGAACTTGCACAATAACATAGACTACAAACAAAGTACTAACTGATTGCAGGTACTAAACTGCTATTAACTGATAATACATTATCTAAAGAAAAGTAACTGATAATAATCTAGACCACAAACGACTGAGGTGGTGTTTGGATACATAGACTAAACTTTAGTCTCTATCACATTGAATATTTAGACATTAATTTGGAGTATTAAACATAGATTACTTACAAAACTAATTACATAAATGAGAGCTAATTCGTGTGATAAATTTTTTAAGCCTAATTAATCTATAATTAGCACATATTTACTGTAGTATTACATATGCTAATTATGGATTAATTAATCTCAATAGATTTGTCTCGTGAATTAGTCCAGGG | |||||||||
gi|117223855|gb|CT847352.1|CT847352 CT847352 Oryza sativa (indica cultivar-group) cv. Guang Lu Ai 4 Oryza sativa Indica Group cD CACGAGACGAATCTTTTGAGC EST sequence (targeted fragment marked with yellow): AACACAACTACAGCCACTGCTATTACGATTTCGACTCCGACATGGTGATGTTCATGGCGGACCTGTCAATTTCTTCCACCTGAGTCTAAGCTTTAACGGCATGTTTACTTCCAAAAACTTTTCCCTACAACATCTACATCAGATCTTGAGTACATTCCTATATCACGACATTAAATATATCATAAATATGCAAATTAATGGCATATTTTGCTTATAAATCTCCATACCAATCTTTTAATTCTAATTAGGCCGTGATTAACTATAACTGTTACGATAACTCAGATGTGCTAATGATTGATTGATTACGCTTATAAGATTCGACTCGTGGTTTGAGATTATTTATTCGAGAACAAAAATAATTATCTACATTTCGTCTAATTTACAATGTGACTTATAAAAATTATTTCTTTACCTTGAAAGATGCACTAATCTGATGTATCAATCATGGTAGGAGTTAGATTTATGTTTCGGAAATCACGTGTTCAATATCAATTTATTATCATTTGGATCGCAGCGAGCAAAGAATAACTACATCAGCACCTCTGAGAGAGGGATGCACTGTTCGTAGACGATGAATAGATGTCCGATTGTCTCATCAATAAATCATGCACTTCACTATTTTGTATTATGAGGAAAGTGCACTTAACATTCGTACATCGATCGATCTTGTGCTCTGAGTATTTTATACGTTGTTCATACAAGAGAGATGTTCCTGTCCTAGTATCATTGTTATTGGTTTTATGTCAAAAAAAAAAAAAAAAAAAAAAAAAGGCAAAGAGAAAAAAAAAAAAAAAAAAAGGGGCAGTTTGGCCTTCGAGGGGGGGCCCGGTACCCAATTCCCCCTATAGGGAATAAATTTACGGCCCTTCCTGGCCGTCTTTTAAAACGTCCTGACTGGAAAAACCTGGGGTTACCCAAATAATCCCCTTTGCACCCTTCCCCTTTTTCCCCCTTGCGTAAAAGGAAAAAGGCCCCCCCCATTCCCTTCCCAAACCTTTGCCCGCCTGGATGGGAAAGGGGAAGGGCCCTGTATTTGCCCTTTTCCCCCGCCGGGGGTGTGGGGTTTATTTTTACTGTTTACTTTTTCCCTTTTCCACCCGCTCTTTCGCCCCCTTCTTTTTTTTTTTTGTCCTTTTTTTTTTTTTCTCCTTTTTTTGGGGTTTTTTCTCCCACTTTCTTAAAAAAGGGGGGTTCTTTTTTGGGGTGGGTTATTTAAGTGTTCTTTTTCCCCCCCCCCCCCCCCCCCACAAACACTCTTTTTTTGGGGGGGTGGGGGGGGGTGCCTCACGGTGTGGGGGGGTGAGCCGCGGCCGCCCCCGCGATCTGGCGGCGG | |||||||||
gi|88414038|gb|CI531010.1|CI531010 CI531010 Oryza sativa (japonica cultivar-group) after pollination embryo Oryza sativa Japonic CACGAGACGAATCTTTTGAGC EST sequence (targeted fragment marked with yellow): GGTCAAATGTTCACGGACGCTGCTCAGGCGATTTGTCTTGTGAACGAATGCTCGATGCAGATCAAATATGAAATAATAAGACTTGCTGACACACTCGAGTAATGACCCTCTACACATTGCAATAGATATGAAGACATGCATGTGTTCTCAGTTCTCACTCACAAAAAAGCACCATTCGCATCCTAGGCCTTCACGCCAAGCATATAAAGTGCAATATGAAGATTTAATCTTCACCTAGAATTTCAACGACGACGGATACTAAACGGTACAAAAGTAAACAATAATAAGGCTTCACATAAGCCACATCAGGTCCTAAGCTCATTATTTAAGCAAGTCAGTGCCCACTTTAGTACTGCCCTCCATAGCCTCGGTTGCCATCANCA | |||||||||
gi|88256904|gb|CI354685.1|CI354685 CI354685 Oryza sativa (japonica cultivar-group) flower Oryza sativa Japonica Group cDNA clone CACGAGACGAATCTTTTGAGC EST sequence (targeted fragment marked with yellow): GGTGCCAAAATAAGACATACCAGTCGTACTTAAAATCATTCCAGATTACAGACTAGGGGCTGTTTGGTTTCCAGAGACTTATTCTAAGTCCCTGTCACATCGGATGTTTGGACACTAATTTGGAGTATTAAACATACACTAATTACATAACCCATTTCATAAGCTTGGACTAATTCGCGAGACGAATCTTTTGAGTCTAATTACGCCATGATTTTGACAATGTGATGCTACAGTAAACTTTTGATAATTATGGATTACTTAGGCTTAAAAAATTCGTCTCGCGGATTAGCTCTCATTTATGAAATTAGTTTTTTTATTAGTCCATGTTTAATACTCTAAATTAGCGTCCAAACATCCGATGTGACATGGGTTAAAAAGTTTTAGCCCCATCTAAACACCCCCGTCTATAGGTACCCCATAAAACAACGTTCATTAAATT | |||||||||
gi|66915720|gb|CX102568.1|CX102568 RECm3568 A normalized whole-life-cycle cDNA library of rice Oryza sativa Indica Group cDNA cl CACGAGACGAATCTTTTGAGC EST sequence (targeted fragment marked with yellow): GCGGCGCGCCATGGCCGCTGCCGCCGGTGGAGCTGACGGCGACGCTGGCTCACAAGTTTGAGATCATCGGCACCTCGAGCATAAAGATCACATTCGACAAGACGACGGTGAAGACGAAGGGGAACCTGTCCCAGCTGCCGCCGCTGGAGGTCCCTCGCATCCCGGACAACCTCCGGCCGCCGTCCAACACCGGCAGCGGCGAGTTCGAGGTGACCTACCTCGACGGCGACACCCGCATCACCCGCGGGGACAGAGGGGAGCTCAGGGTGTTCGTCATCTCGTGATCGGACGGACGCGTTCGCGACATAGGTATGCGGCTTGCGATTCTGAAACTGAAACTGAAGCGCACACACGGTTTTGTGTTCTTTCTCTGCTACTAGTAGATCCTCAGGTGGTGTTTGGATCCAGGGACTTAACTTTAGTCCCTATATTTAGACACTAATTTATAGTATTAAATATAGACTACTTATAAACCTAATTACATAAATGAAAGCTAATTCACGAGACAATTTTTTTAAGCCTAATTAATCCATAATTAGATAATGTTTACTGTCGCATCACATAGGCTAATCATGGATTAATTAGGCTAAATAGATTCGTCTCGCGAATTAGTCCAAGATTATGGATGGGTTTTATTAATAGTCTACGTTTAATATTTATAATTAATTTTC | |||||||||
gi|89175280|gb|CI111799.1|CI111799 CI111799 Oryza sativa (japonica cultivar-group) Panicles two weeks after flowering Oryza sati CACGAGACGAATCTTTTGAGC EST sequence (targeted fragment marked with yellow): AAAGGTGCCAAAATAAGACATACCAGTCGTACTTAAAATCATTCCAGATTACAGACTAGGGGCTGTTTGGTTTCCAGAGACTTATTCTAAGTCCCTGTCACATCGGATGTTTGGACACTAATTTGGAGTATTAAACATACACTAATTACATAACCCATTTCATAAGCTTGGACTAATTCGCGAGACGAATCTTTTGAGTCTAATTACGCCATGATTTTGACAATGTGATGCTACAGTAAACTTTTGATAATTATGGATTAATTAGGCTTAAAAAATTCGTCTCGCGGATTAGCTCTCATTTATGAAATTAGTTTTTTTATTAGTCCATGTTTAATACTCTAAATTAGCGTCCAAACATCCGATGTGACATGGGTTAAAAAGTTTTAGCCCCATCTAAACACCCCCGTCTATAGGTACCCCATACAACAACGTTCATTAAATCCAGGAATGCATCTTTCAAATAGTACAAAGCTCCAGCAATCTAACATTCATCAGGGCTAACAGGAACAGCACGTTTTCCAGCTT | |||||||||
gi|88414243|gb|CI533613.1|CI533613 CI533613 Oryza sativa (japonica cultivar-group) 1 day after pollination pistil Oryza sativa J CACGAGACGAATCTTTTGAGC EST sequence (targeted fragment marked with yellow): GTATAAAATATTAAATATAGATAAATTAAAAAACTAATTACAAAGTTAGGGGGGAAATCACGAGACAAATCTTTTGAGCCTAATTAGTTAATAATTAGCCATAAGTGCTACAGTAACCCACATGTGCTAATGACAAATTAATTAGGCTTAAAAGATTCGTCTCGTGGTTTTCAGGCGAGTTATGAAATTAGTTTTTTCCTTCGTGTCCGAAAACCCCTTCCGATATTCGGTCAAACGTCCGATGTGACAATCAAAAATTTTCTTTTCGCGAACTAAACAGGCCCTAAACAACCTACAAATGCCAACAAGGCCTCCAGCTTCTGCATAAAGCAACGACAATCGGGAATCAAATCCTTATGAACCTATCGCCAGAGGTTGATACATCGATCATGTATATCGACATGTGCCT | |||||||||
gi|89164775|gb|CI101863.1|CI101863 CI101863 Oryza sativa (japonica cultivar-group) Panicles one day after flowering Oryza sativa CACGAGACGAATCTTTTGAGC EST sequence (targeted fragment marked with yellow): TTTTTTTTTCGGACACAAATGAAAAAACTAATTTCATAACTCGCCTGGAAACCGCGAGACAAATTTATTAAGCCCAATTAATCCGTCATTAGCACATGTGGGTACTATAGCACTTATGGCTAATCATGGACTAATTAGTCTTAAAAGATTCATCTCGTGATTTCCATGCAAACTGTGCAATTAGTTTTTTATTTTTATCTATATTTAATACACCATGTATGTGTACAAATATTTGATGTGATGTTTTTGAGAAAAAAAATTTAGGAACTAAACAAGGCCTAAACAAAAAAAAAAGTCCAAAATATAGTCTCTGGTCTCTCCCACCACCTTCATGGCATTAAAGCCTCACCTACTGGCGGCTGCTGGAAACGGATCATCGGCAGTGGAGGATAAAATGCGGATAACCGGCAAGATCGTCTGGGCAGAGCAGGCCGAGCAGATCGCGGAACCAGTTCATCTCCATGTCGAGGTGCACGGTGTCGCGCACGTGCACGCCTCTCTCCCGGTAGAAATCCGGGCTGAGCGCCGTGGCGCCGCCCACCGCGAAGTTGGCCC | |||||||||
gi|88202855|gb|CI200707.1|CI200707 CI200707 Oryza sativa (japonica cultivar-group) Panicles mixture of one, two, three weeks aft CACGAGACGAATCTTTTGAGC EST sequence (targeted fragment marked with yellow): TTTTTTTTTTTTTTTTTTTTTTTTTTTTTGTCAAATCATGGCGTAATTAGGCTCAAAAGATTCATCTCGTAATTTACAGTCGGATTGTGCAATTGGGTTTTTTTCGTCCACATTTGATGCTCCATAAATGTGTCCAAACATTTGATGTGACGAAAAAGTTGGAAGTTTGAAAAAAAAGTTGAAATCTAAACACGGCCTAAGCTACTTTTTATTTGTATGGATTTCGTTGGGATTTTACAGATGCAAACAGCACACCTGACTCCAAACTATACACTGGTTCACTGAACAATGTTTGCCACTTGTCTCTGTTGTGTCGGTGAACTAATCTCCATCGCCGTCGATCTTAGGCCAGCCATTTTCAGCCTGCGACTTGACAAACGCGGCCAGTAGCTTGATATCATCTTCGACCAGCCGAGGTCCGAAAGTGCACTGCCCTCTCGGGGTGCATTTTTCTCCGAAGCCCGGCATTCTTCCCTTCCCGTAGTACGTTATATTGTATAGCTCGT | |||||||||
gi|117250318|gb|CT843993.1|CT843993 CT843993 Oryza sativa (indica cultivar-group) cv. Guang Lu Ai 4 Oryza sativa Indica Group cD CACGAGACGAATCTTTTGAGC EST sequence (targeted fragment marked with yellow): AAGAACCGAGAACTCGGACTGATCAAACACATCAGAGTATTAGCAGATAAATTTTGGTGTATGGCATCAAAGATCCTTCTGGTAGTGATCGGCGTCGCGGTGGTCAGCGTGGTTGCATCGGCGGCGCCGCCGGCGCAGCCACCGCGCATACAAGCGGACGTCGTCGTGATGGGCTACGTGCCGTGCAACAACGGCACCTCCATGAAATCGGGCTCTGCTCCCGGGTTCCCAAGTAAGGCCTACTTTAGTTTCCAAATTTTTTTCTCACGAACATCACATCGAATCTTTGACACATGTATGAAGCATTAAATATAGATAAAAACAAAAACTAATTGTATAGTTTGCATGGAAATCGTGAGATGATTTTTTAAGTCTAATTAGTCTGATCAACCATAAGTTCTGCAGTAACCCACGTGTGTTAATGATGGCTTAATTAGTCTTAAAAGATTCGTCTCGCGGTTTTCATGCAAGTTATAAAATTTGTTTTTTCATTCGTGTCCGAAAACCCTTTCTGACATCCGATGAATCATTTAATGTGACATCTAAAAATTTTCAATTCGCGAACTAAACACACCCTAAGCTAGCTGCTCCGCGCCGCCGCGCTCTCAATTTTTCAATCTAACTACTAATGCTCTGCATGCACCGTGCGTGATGTGTGGCAGACGCGGTGGTGCAGCTGCAGTGCGCGGGGGACGCCGTGGCGGCGGTGGCGTCGGGGAGCGCGACGACGGACGGCAAGGGGTGGTTCCGCATGGCGATGAACACGACGGCGGCGCTGTCGAGCGTGGCCAGCGGCTGCTCGCTGGTGGTGACCACGCCGCTGGCGACGTGCGACGCGGCGCTCCCGGCGACGGGGACGCTCCAGTCCGGCCTCCGGCTCCTCGTCAGCATGGTCTTCTTCCCGCGTGGCTTCTCCTACGTCGTTTGATCTGTTCGTCTGGGTCCCATGGTCAATTGCTCTACGTGCAGTTAGTATCTACGCCTGAGAAATTATTAAACTCTTCTTCTCGTTTTTTATGTTACTCGAATGGTTATAAAAAGAATTGAAAAAAACCAACATTTTTAGAACAAAAAAAAAAAAAAAAAAGGCCAGCTTGGCCTCGAGGGGGGGCCC | |||||||||
gi|117244357|gb|CT849703.1|CT849703 CT849703 Oryza sativa (indica cultivar-group) cv. Guang Lu Ai 4 Oryza sativa Indica Group cD CACGAGACGAATCTTTTGAGC EST sequence (targeted fragment marked with yellow): ATGACATACGACGGGTTCCTTAATTAGGGCTTACTCGGAGTACGCCTTAGCAGCCTGAAGCCAATAAATATATGTCCTTCCAATCATAACTATTAACGTTTAGAATTAAAACTTCTACTGTCAATTTTCTATTAAAACAAGTTTGCAAAATCTAATATCTAATAATTTTATGATATCATGACAGTATTATTTTACAAATATACTCTTACGATATTTTTAATTTTAAACTAAGCATTCACAAAGTTAATAATGGTCAAAGTTTCGAATTTTGGCCATTTTTTTGTCATAAATTATTAAATATGTATGAGCGGATTGCGGATCCAGTAATTAATTGTAACTTCAGTTTTCTTAACATGTGCCCGAAGTGGTATTAAGCCAAAATGCCATTAGAAATGCTTCATAGTAGTGATAGCAAATTAGGGCATGTTTAGTTGGCAAAAAATTTTGCCCCTACATATCATATCAAATATACGGACACACATTTAAAGTATTAAACGTAGTCTTCGCCAGGAAACTGCGGGACGAATTTATTAAGCCTAATTAATACGTCATTAGTAATGTTTACTGTAGCACCACATTGTCAATTCATGGCACAAAGTAGGCTTAAAAGATTCGTCTCATAATTTCCTAGCGAACTGTGTAATTGGTTTTTTCTACATTTAATACTCTATACATGTGCCCAAACATTCGATGTGATAGCGTGAAAATTTTTATTTGAAAACTAAGCATGCCCTTAGAAACGAATATAGTAAAATAAATATTTTAACTAGTCTTATCCAAGTCAATCGAGACAAAGTTAGTTTGCGTTATTCATTGTAAGGTCAAGTCTATCCTAGAATAAGATAAAAAAAAAAAAAA | |||||||||
gi|86481653|gb|CI124286.1|CI124286 CI124286 Oryza sativa (japonica cultivar-group) supermix Oryza sativa Japonica Group cDNA clo CACGAGACGAATCTTTTGAGC EST sequence (targeted fragment marked with yellow): ATCAAAAATAGAATTTTCATAGAATTTTCAGATTTGAAAATATGCTTATACGGAGGGAGGGAGTACTACTCATAGCACGACATAAAAATACTACTACTTTTCACTGAAACAGTGTAGCACACGGATTGACATGCAAAGATTCCTATAGCCAAAACTTTTCCAAACTACTGCTATTATTCACCGAAACCGACTGCTATGACTGTCACCGAAACCGACTGCTTTGACGATCGGATTCACATCCCACAGCCAACAACAAATCAAGTCAATAGCAAACAACATGCAACCAGTGGCAATCATCAAATTTGCTGGCAATCAGAACAGCGAGATAGCAGAAGTCGCCGGATTTGCTTAGCAGCTCCAAATCATCAAATTTGCTGGCAATCAGAACAGCGAGATAGCAAAAGTCGCCGGATTTGCTTAGGGGGTGTTTAGATGGGGCTAAAACTTTTTAGCCCAAGTCACATCAGATGTTTGAACGCTAATTTAGAGTATTAAACATAGACTAATAAAAAAACTAATTTCATAAATGAGAGCTAATCCGCGAGACGATTTTTTTAAGCCTAATTAATCCATAATTATCAAAAGTTTACTGTAGCATCACATTGTCAAAATCATGACATAATTAGACTCAAAAGATTCGTCTCGCGAAT | |||||||||
gi|29677634|gb|CB673909.1|CB673909 OSJNEe08K23.r OSJNEe Oryza sativa Japonica Group cDNA clone OSJNEe08K23 3', mRNA sequence CACGAGACGAATCTTTTGAGC EST sequence (targeted fragment marked with yellow): ATAATGCCAATGCGTTCGTCTGTACGATGTCGAGTCATTCCACTGTTGCAGGCTCCCAGTTCATTTCGCTCAGTTGTCATGATGCACTGATGCAGGCCTTGTTGTGACTTTGAGAAACGTTTATTCAGAGTGCAAACCGCAGAACACTTCTTCAGTTCAGTTCAATGAAATCAGTATATTGACTTGGTTTGTAATTTGAAGCTTTTAGGGGTAGTTTGGATATAGGGACTAAACTTTAGTCTATGTTACATCGGATATTTGATATTAATTTATAATATTAAATATAAGCTAACTATAAAACTAATTACATAGATAGATGCTAATTTGCGAGATGAATCTATTAAGCCAAATTAATCCATTTTTAACACATATTTACTGTAGCACAACATTATCAAATCATGTACTAATTAGGCTTAATAGATTCGTCTCGCGAATTAGCCTCCATCTATGTAATTTATTTTATAATTAGTATATGTTTAATACTTTAAATTAATGTTAAACATCCTTTATCCAAACTACGCTTTAGTAGTTTGGGAAATCTGATAAGAAATGGGTTGGGTAATCTTTTCTTCTCTTTTTGAAGAAAAGAAATTGTGGATGATTTGAACAGCTATTCTTCGCCATTCTTGACAATCTCCAAGGGTTCTCTTACAACGCTCGGGACGAGCCAGGTGACACCGATGAAGATTGCAGAGAAGCTTGCCTGAACAAATGCTACTGCATTGCATACTCAAGTGAATCTGGATGTGCAAGCTCTGTATTACGACCTGTACAATCTGAGCTCAGCTAATAAACCTCCATACAGCAAGATC | |||||||||
gi|88721184|gb|CI744483.1|CI744483 CI744483 Oryza sativa (japonica cultivar-group) library (Kikuchi S) Oryza sativa Japonica Gro CACGAGACGAATCTTTTGAGC EST sequence (targeted fragment marked with yellow): AAAAAAATTTAAGCTATACCTCACCTATTTTCACCATGTGTACAGCTTCGCCCCTGACTGTAGTATCACATTGTCAAATCATGGCGTAATTAGGCTCAAAAGATTCGTCTCGCAATTTACATGCAAACTGTGCAATTGGTTTTTTTTTCGTCCACATTTAATGTTTCATGCATGTGTCCAAACATTTAATGTGATGTTTTTGGTCAGATTTTTTTTGAATCTAAACAAAGCCATAATTTATCGATAATCGTATGGATAGCCTCTTTGTTTTTGCAATTGGCGGGCTCCTTATGCGTAAAGCTGAAGCTATGCTAAATCTGACCAGGGTAGCAAATGAAAGGGTTTGCATACGTTGGTTTAAACC | |||||||||
gi|89195330|gb|CI051443.1|CI051443 CI051443 Oryza sativa (japonica cultivar-group) cold treated callus Oryza sativa Japonica Gro CACGAGACGAATCTTTTGAGC EST sequence (targeted fragment marked with yellow): CTCATAAAATCACATCATTTTACTTTACATTTGAACATCATTCTACAAATCATTTTAATTTAAATCATATCAACTTATGAAAACTTATGTTTATGTAATATTTATGTAAGCTTATGTTGGTTAAGCTATCTTACACATTATTTCGACTTATTGTTATCATAGTAAATTCCTGCAATAACGTGTGGGTTTCACCTAGTTATTAATGTAGGAGTGCTGACAATCATTTTGCTTTCTTTCATAAAACAGTTACAGCCTTGTTTATTTCGTGAAAAAAAAATTTGGGTGTCACATCGGATGTTTGATTGGATGTTGGAAGGTGTTTTCGGACACGAAAGAAAAAACTAATTTCATAACTCGCCCAGAAACCGCAAGACGGATCTTTTGGGCCTAATTAAGCCGTCATTAGCACATGTGGGGTACTGTAGCACTTATGGCTAATCATGAACTAATTAGGCTCAAAAGATTCGTCTCGCGATTTCCGTGCAAACTGTGCAATTAGTTTTGTTTTTATCTATATTTAATGTCTCATGCATGTGTCCAAAGATTCGATGTGACATTT | |||||||||
gi|58659361|gb|CK048041.1|CK048041 48625rsiceh_18457.y1 Oryza sativa cv. PA64s panicle ferile cDNA library Oryza sativa Indica G CACGAGACGAATCTTTTGAGC EST sequence (targeted fragment marked with yellow): AATCGGCACGAGGGCTAATTAATCCATAATTAGCACATGTTTACTATAGCATCATATAGGCTAATCATGGATTAATTAGGCTCAATAGATTCGTCTCGCAAATTAGTCCACGGTTATGGAATAGGTTTTATCATTAGTCTATGTTTAATACTTCTAATTAGTGTCCCAAATATCCGATATGATAGGGACCAAAAATAAGTCCCTGGATCCAAATAGGGGTGGTCTAAGTAAGCTGCGATTTCGATTAAGAGATGCNTTGCCTCCCCCTGGCCTNCTCTCTCAGATCTCTACAGCTGTGTTGACGTTGGTGATTCCAAATTCATTTGCACTTAATAAAGGCCAGCTTCTACCGTAGTGGAGCGGAGGCCCATCGCCGGATGGTGACAAACTGAAACAGTCTCCTCGTCAATGGTATAAAAGGTTTGATTCATTTATGTTGTCACATGGCTTTAAGAGGTCTGAATTTGATAGCTATGTGTATATTAAATTTGTTAATGGATCACCTATATACTTGCTGTTATATGTTGATGATATATTGA | |||||||||
gi|88321381|gb|CI535333.1|CI535333 CI535333 Oryza sativa (japonica cultivar-group) after pollination embryo Oryza sativa Japonic CACGAGACGAATCTTTTGAGC EST sequence (targeted fragment marked with yellow): CTCCGCCAGAAAACTGCGAGATGAATTTATTAAGCCTAATTAATTTGTCATTAGCAAATGTTTACCTGTAACACCACATTGTCAAATCATGACGCAATNACACTTAAAAGATTCGTCTCGCAATTTCCTTATGAACTGTGTAATTGGTTTCTCTTTTCTGCATTTAATACTTCATGCATATGTACAAACATTCAATGTGACAACGTAAAAAATCCAAACATTCGATGTGACGAAGTGAAAAATTTTGTTTGGGAACTAAACAGGCCCCAACTTGCCTCCCTTCTTTTCCTTGCCCCAGATTCCTTTGCCACAACATGGAGAAAGAGATATATGCCCAGTGTTGTGATATCCAGGTTAGATAAGATTCTGGAAAGTTACAGGA | |||||||||
gi|44678822|gb|CR292256.1|CR292256 CR292256 Oryza sativa library (Han B) Oryza sativa cDNA clone y656d01p5, mRNA sequence CACGAGACGAATCTTTTGAGC EST sequence (targeted fragment marked with yellow): GGAATTCGGCCATTATGGCCGGGGTGAGGCGAATGAGCTGAAGCTGCTGGGCATGTGGGCCAGCCCGTTCGCTCTGCGAGCGAAGCTTGCGCTCAGCTTCAAGGGCCTGAGCTACGACTACATCGAGGAGGACTTCAAGAACAAGAGCGATCTCCTCCTCAGCTCCAACCCGGTGCACAAGAAGGTGCCCGTGCTCATCCACAACGGTAAGCCCATCTGCGAGTCGCAGGTCATCGTGCAGTACATCGACGAGGTGTTCCCCGACGCCGGCGTCACCCTCCTCCCCGCTGATCCCCACGATCGCGCCGTCGCTCGCTTCTGGGCTGCCTACATTGACGAAAAGCTGTTCAGTGCGTGGATTCTGGTGTTCAGAAGCAAGACGGAGGAGGAGAAGGCGGAGGCGGTGAAGCAGACGTTTGCGGTGGTGGAGAAACTGGAGGGAGCACTGAGCGAGTGCTCCAAGGGGAAGCCCTTCTTCGGCGGCGACACCGTCGGCTACGTCGACGTCGTGCTCGGAGGCTTCGTCGCGTGGGTGCACGCCATCGAAGAGGTGTACGACCTGAACCAGTTCGACGCAACCCAGACGCCGCTCCTGGCGGCGTGGTTGGAG | |||||||||
gi|44670591|gb|CR284025.1|CR284025 CR284025 Oryza sativa library (Han B) Oryza sativa cDNA clone p865a03p3, mRNA sequence CACGAGACGAATCTTTTGAGC EST sequence (targeted fragment marked with yellow): TTTTTTTTTTTTTTTTTTTTTTTTTTTGCTAAATCATGGAACAATTTGGTTTAAAAGATTCGTCTCGTAATTTACACGCAAACTATGTAATTAGTTTTTTTCGTCTAATATTTAATACTTCGTACATGTCTTTAAAAAAAATTATCGGTGCATCTAAACACCCCCCCCAAAAAAAAAAAAAAACAGGCCAACATACCATGCCATGACAATGCGGAATGCATCAGCCTCTGCCTGCACCAGGCATTTCTGCTCTGTGACTCTGTCCGAGTGAAGAAGACGACGACGACGACGACGACGCTAAAAAGCAAGTGACACATCTGCTGGCTAGATGCCGCTACATTTTACTGTTGCGGTTGGTGTTGGTGCCCGTGGTGGGCCCCATCTCCTTGGCGATATTCCGGAGCACGTACTTCTGGATCTTTCCGGTGGACGTCTTCGGTAACTCGTCGCGGAAGATCACCGTCTCTGGGACCATGTACCGCGGNATAGCGCTCCCGGGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAACCGGAGACAGGGGGAAACAAGGCACAACAGGGGCCCCGGGAAAAAGTGGGGCGCCCCCAAAGGCGAAAAAATTCAAATTTGGGCCCGACATAACAAAAAGCACGGAATCACGAAAAAGG | |||||||||
gi|88465043|gb|CI514815.1|CI514815 CI514815 Oryza sativa (japonica cultivar-group) 4 nuclei stage pistil Oryza sativa Japonica G CACGAGACGAATCTTTTGAGC EST sequence (targeted fragment marked with yellow): CGCTGTCTCTTTATAAGTTATATCAAGACATTTGAGTATGTAACTAAATCTCTTCTTTTTATAAAGTTAATGTCCACTAAACACTTAATGTCCATCATTAGCAAATATTTACTGTGGCACCACATTGTCATATCATGACGCAATTAGGTTTAAAAGATTCGTCTCGCAATTTACACGTAAACTATGTAATTTATTTTTTTCGTATATATTTAATACTCCGTACATGTGTTTAAACGTTCGATGTGACGGGAAAAAAAAATTTGCCGGTGGATTTAAACACCCCCTTAATGTCGATGCAACAGTACTCGAGTCCTTGGCGGGGGTTATATTTTCTTGGCTACTCCAATTAGCTTGCAGATCTGGTTGGATTTTTTTTTATTGTGAGCTAGCTTAATTTAGTCGGTATTG | |||||||||
gi|29630842|gb|CB635851.1|CB635851 OSIIEb16K13.r OSIIEb Oryza sativa Indica Group cDNA clone OSIIEb16K13 3', mRNA sequence CACGAGACGAATCTTTTGAGC EST sequence (targeted fragment marked with yellow): GTTCAAAAAAGCTCTGTCTCATGTGGATTCCCAAGTTAAAAGTATTCCAGCAACAGCTCAGGTTGCAGCACAACAAGGACACTATCTTGCTGAATGTTTTAACAAGATGGACCAATGCAAAGAACATCCAGAAGGTCCGTTGCGCATGACAGGAACAGGATCAGGACGGCACAATTTCCGCCCATTCCGGTACAAGCATCTTGGGCAATTTGCACCCTTGGGTGGAGAGCAAGCTGCTGCAGAGCTCCCAGGCGACTGGGTTTCCATGGGCCATAGCACTCAGTGGCTCTGGTACTCTGTATATGCAAGCAAACAAGTGAGTTGGCGCACACGGATGCTGGTGGTATCCGACTGGACTCGGAGGTTCATATTTGGGAGGGATTCAAGCCGAATTTAGCACTGCCAAATGCTGCATCATTTCTTGTAGAGATAACATTGCTGAATAATTTTGTTGAGTTTGGCTGTGTTTAGTTCGTGTGCCAAAATAAAATTTTTGAAGTATACGGACACATTTGAAGTATTAAACGTAGACTAATAACAAAACAGATTACAGATTTCGCCTGTAAACTGCGAGACGAATCTATTAAGCCTAATTAATTCGTCATTAGCAAATGTTTACTGTAGCACCACATTGTCAAATCAAGACGTAATTAGGCTCAAAAGATTCGTCTCGCAATTTACATGCAAACTGTGTAATTGGTTTTTTTCGTCCATATTTAATGCTCCATATATGTATTCAAACATTTGATGTGACGGAAAAGTTGAAAGTTTGAAGAAAAAAGTTTAAATATAAACCATGCCTTTGTAACAAAAAAAG | |||||||||
gi|33824654|gb|CF338136.1|CF338136 JMT--08-N23.g1 AtJMT-overexpressing transgenic rice plasmid cDNA library (JMT) Oryza sativa J CACGAGACGAATCTTTTGAGC EST sequence (targeted fragment marked with yellow): TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTAAAATTTTATTTTTTTTAATTTAAAAAACTAATTACAAAGTTGGGGGGGAAATCACAAAACAAATTTTTTGAGCCTAATTATTTAAAAATTACCCTTAAGGGCTACAGAAACCCACATTTGCTAATGACAAATTAATTAGGCTTAAAAAATTCGTCTCGGGGTTTTCAGGCGAATTATAAAATTAGTTTTTTCCTTCGGGTCCGAAAACCCCTTCCGATTTTCGGTCAAACGTCCGATGTGACAATCAAAAAATTTTTTTTTCGGAAACTAAACAGGCCCTAAACAACCTACAAATGCCAACAAGGCCTCCAGCTTTTGCATAAAGCAACGACAATCGGG | |||||||||
gi|88257044|gb|CI359432.1|CI359432 CI359432 Oryza sativa (japonica cultivar-group) flower Oryza sativa Japonica Group cDNA clone CACGAGACGAATCTTTTGAGC EST sequence (targeted fragment marked with yellow): CGGTATTTTTTTTCGCTAGCACTCAGGCCTTATTTAATTCGCGAAAAGAAAATTTTTGTGTGTCATATCGAACATTTGACCGGATGTCAGACGGGGTTTTGGGACATGAATGAAAAAACTAATTTCATAACTCGCTTGGAAACCGCGAGACGAATTTATTAAGCCTAATTAATCTGTCATTAGCACATGTGGGTTACTATAGCACTTATGGCTAATCATGGACTAATTAGGCTCAAAATATTCGTCTCGCGATTTCCAAGCAAAATGTGCAATTAGTTTTTCATTTTATCTATATTTAATATTCTATGTATATATCCGAAGATTCGATGTGATATTTATGGGAAGAAAATTTTGGGAACTAAACAATGCCTCGATATGCCGGGAAATGTCCTGTCACAGTGTCTACTGGTGAAAATTCTGTGGTAGTAGTTGTTTG | |||||||||
gi|117250727|gb|CT857203.1|CT857203 CT857203 Oryza sativa (indica cultivar-group) cv. Guang Lu Ai 4 Oryza sativa Indica Group cD CACGAGACGAATCTTTTGAGC EST sequence (targeted fragment marked with yellow): ATTCTACACGTACCTTGAAAAGGGGCAGCCTTTCTCTCTCTCGCGCGCGCGCGTTCTTCCTCTCCCCTTTCTTCTTCGAATTTCAGATTAGTTGGTGATGGCGCCGCAGAAGGTGATCTTGAAGGTTTCTTCTATGAGTGATACGAAAATGAAGCAGAAAGCAATGGAAACTGTTGCAGATATCTATGGTATCGACTCCATAGCCGCCGATCATAAAGATCAAAAGATGACTGTAATAGGTGAAGTTGACACCGTCAAGATCGCCAAGAAGTTGAAGAAATTCGGGAAGGTCGATATCATATCGGTTGGGCCCGCCAAAGAAGAGAAGAAGGATGATAAGAAAGGGGACAAAAAGTGATCAGACTTCTTTAGTTTCAGGCCTTCAGATGAATATACTGTGTTCTTCTGATGGCGTGTACACTTGGGCTATGTATAAATTGAGGAGGGGGTTAGATTCAAGGGTGTAAAGTTTTGGCATGTCGCATCGGATATTATATAGGGTGTCATATGGTGTGTTCAGACACTAATAAAAAACTAATTACAGAATCCGTCAGTAAACCACGAGATAAATTTATTAAGCCTAATTAATCTGTCATTAGTAAATGTTTACGGTAGCACCATATTGTCAAATCATGGAGCAATTAGGCTTAAAAGATTCGTCTCGCAAATTAGTCGTAATCTGTACAATTAAGTTTTTTTTAGCCTATATTTAATACTTCAAAAAAAAAAAAAAAAAAGGCCAGCTTTGGCCTCCAGGGGGGGGCCCGGGTACCCAATTCCGCCCTATAGTGGAGTCCTATTGCGCGCCGCTCACGGGGGCGTCGGTTTTAAAAAGGTCCGTGGACGGGAAAAAACCCTGGGCGTTTACCCCAACTTTAAATCCCCCTTGCCAGCAACATTCCCCCTTTTCCCCCGACTGGGGGGTAATAACCAAAAAAAGGCCCCCAACCCAATCTGCCCCTTCCCAGAACAATTTCGCCCAACGCCCGGGAATGGGGCAAAAGGGGAAAACGGCACCCCAGGTAAGAGGGCGACCACTTTAAAGCGCGAGGCCGCGGGGGGGGGGGGGGGGGAAAACGAGCCGGAGAAAAGAGGGGGTACAAAAAAAAAGAAACTTTTGTGTAGGGGGGGAGAACCATTTAAAAACGGCCGCACGCGCCATCACTTTTATTATGTGTATCTTTTTTGTTTCTTTTTTCGCGGCATACCTATTCTGCCTTGTTTTTATATATGACGGATGCA | |||||||||
gi|58690251|gb|CK078938.1|CK078938 79155rsicen_26381.y1 Oryza sativa cv. LYP9 booting whole plant cDNA library Oryza sativa Indi CACGAGACGAATCTTTTGAGC EST sequence (targeted fragment marked with yellow): CCCGGGCTGCAGGACAGGTATTTCAAAGTGGTGAAACCCGTGTAAAACGACTACTTGAGTAGTATAGTAGGTGGTTTCATCTGATGTGGCCATTTAACCCTAGTCAACATACTGAATCAGCAGACGATTTTTGACCGCACGTGCTAAGGTGGTGTTTGGATCAAGGGACTATGTCACATCAGATGTTTGAAAATAGATTACTTACAAAACTAATTGCATAAATAAGAGCTAATTCGCGAGACATTTTTTTAAGCCTAATTAATCAATAATTAGCACATGTTTACTATAGCATCACATAGGCTAATCATGGATTAATTAGGCTCAATAGATTCGTCTCGCAAATTAGTCCAGGGTTATGGAATAGGTTTTATCATTAGCCTATGTTTAATACTTCTAATTAGTGTCCCAAACATCCGATATGATAGGGACCAAAAATAAGTCCCTGGATCCAAATAGGGGTGGTCTAAGTAAGCTGCGATTTCGATTAAGGATGCTTGCCTCCCTGGCCCTCTCTCAGTCTCACACTTGTTGAGTTGTGATCCAAATTCATTTGCACTTAATAAAGGCCAGCTTCTGCCGTAGTGGAGCGGAGGCCCATCGCCGGATGGTGACAAACTGAAACAGCCTCCT | |||||||||
gi|29680160|gb|CB676435.1|CB676435 OSJNEe12L04.f OSJNEe Oryza sativa Japonica Group cDNA clone OSJNEe12L04 5', mRNA sequence CACGAGACGAATCTTTTGAGC EST sequence (targeted fragment marked with yellow): CTGCATTGTTGTGGATCGAGTAGCTATAGCTAGCTAGTGATGGAGATCTTGGTGAGTGCACTGCTCCTGCTCCTCGTGCCACCCTTGTCCGCCCTCCTCGCCGTCGCCGCGCCGAGCCTCGCGTGGCCGTCGGGGTCGTCGTCGGTGAGGAAGCTGATCGCCAAGAAGGTGGCGCCGGAGCAGGCGGCGCGCGACGAGCTGCTGCGCGTGGCGCGGTACAGTAGCGCTAGCGTCGCCGCTGCCGCTAGTGCTGTCCAACAACCAGGCGGCAGCGAGAGTAGTCGTCCGGCGGCGGCGGCGGCGGATGATGGTGGGCGGCCGGATCAGTGCGCGGTGTGCCTGAGCGGCATCGAGGAGGGCGACGAGGTGAGGGAGCTCCGGTGCCGGCACCTGTTCCACCGTGGCTGCCTCGACCGGTGGTGGTTGTCGGCGCGGCCGCCCGCCACGTGCCCGCTCTGCCGCTGCCGGCTCCTGCAGAGCCCGTCGGCGGCGGCGGACGACGGCGACGGCGACGGCGAGGAGGATTCGGACTCGGACATGGTGATGTTCATGGCGTACCTGCGAAGCAGTAGCACCTGGCTCTAGCCATTAAGGGCGTGTTTAGTTCCAAAAACTTTTCTCAAAAACATCGCATCAAATCTTTAGACACATATATAGGACATTAAATATAGATAAATAAAAAACTAATGGCATAGTTTGCATATAAATCGCGAGACGAATCTTTTGAGTCTAATTAGGCCATGATTAACTATAAGTGCTACAATAACTTACATGTGCTAATGACAGATTGATTAGGCTTAAAAGATTCGTCTCGTGGTTTTAGTTTTTTTATTCGTGACCGAAAATCCCTTTTG | |||||||||