| mature miRNA: CACTTTATAGTACAACGAATC species: Oryza sativa database: miRNEST The numbers on the right side of the alignments show a score calculated for them. When calculating the score, a mismatch is given a score of 1, bulge: 2, and wobble: 0.5. |
| Predicted miRNA targets | |||||||||
gi|29640175|gb|CB645184.1|CB645184 OSJNEb06L16.f OSJNEb Oryza sativa Japonica Group cDNA clone OSJNEb06L16 5', mRNA sequence CACTTTATAGTACAACGAATC EST sequence (targeted fragment marked with yellow): GGACCCTACTACCCTTTGGAGCTGGGGCGGCTTGACGGCAAGGTCGGGACGCGCGCCGTGGTGAAGCACAGCCTCCCCGGCGCCGCCTTCGACCTCGACCAGCTCAACAAGCTCTTCGCCACCAACGGCCTCACCCAGACCGACATGATCGCCCTCTCAGGTATCAAAAACATGACAAATTTTACAGTACCAAAATTTTGTATTCTGAGTGCCAAATTCTACACTAGAAAATATAACAATCTAAAACCGGATGTGACACTTTATAGTACAACGAATCTGGACAGAAAACATATCTAGATTCGTTATACTATGAAGTGTCTCGTTCGGTACTAGATTGCTATATTATAGGACGGAGAGAGTATCTTCTTAAGAATTATAAAATCACTCTAAATCGCTATAAAATTGGGAATTCTCGGTGTTAAATGTTACAATAGAATAGAATATATGGTATCTTGGAGTATCTTGAGCTATATCTTCTTAAAAATTGTAAAATCACTCTAAAAACGTACTAACACAAATTCCTTTTTATAAAATCAAATTCTAAAACTAATTTATAAAATTCAAATGAACTTTTGGGTGAATCTGTTTTCATCGTCTGCTTGTTAGCTTATCAGTCGTAACGAATGTGGTGCAGGAGGGCACACGATAGGGGTGACGCACTGCGACAAGTTCGTGCGGCGGCTGTACCAGTTCAAGGGGGCGGCGCCGCAGTACAGCCCGCCGATGAACCTGGCGTTCCTGCGGCAGATGAGGCAGACGTGCCCGCTCAGCTACAGCCCGAC | |||||||||
gi|86532184|gb|CI172390.1|CI172390 CI172390 Oryza sativa (japonica cultivar-group) supermix Oryza sativa Japonica Group cDNA clo CACTTTATAGTACAACGAATC EST sequence (targeted fragment marked with yellow): TTTTTTAAAAACTAATATCTCCGTTCCATAAAAAACTATGGTACCCGGATGTCTGATTCGTAGTACTATAATGTATTACATCCGTACTAGGGTTGATTTTTTATTAAGACGGAGGGAGTAAAGTCCAACTAGTAATAATTAATATTATTAGAGTGAAACTAATACATATATTTGAGCATGATTATTTGGTAGAAGAAGCAGGCGTGAAGGAGACGAGCTCCTTGGATTTGAGCCAGGCCTTCACCACCACCACGGCGTCGAACACCCGGTCACCGCCGGCGGCGGCGCCGCCGCGGGGGTCCCTCGCGCTCGCGGCGACCTTGAGGTAGTAAGCCACGCCGGAGACGACCTGCTTCTGCGCCTCCACGACGCGTGCGAACGCGAGCTTCACCGGGACGGGGT | |||||||||
gi|86862079|gb|CI330672.1|CI330672 CI330672 Oryza sativa (japonica cultivar-group) shoot Oryza sativa Japonica Group cDNA clone CACTTTATAGTACAACGAATC EST sequence (targeted fragment marked with yellow): CGCTGTTGAATAATTGATTGTATAGGAAACACATATAACAATGATATAAATAACAGCTGTACAATGGAAACTGCAAGTGTGTGTGTACACAACTTGGCGGATGAAACCTACTTCAATTCTTCCCCATTTTGAAACATACATTAATTCTCCTTTATATTGCCACCAAAAATTTTACAAAACCTATCCCTAATAATAACCAACCCATCACACTAAGTAGATCAACTGTTAGGGCTCAAGATTAACCAGAAGATGATGATGATTTTGCCAGTAATTACCACTCCCTCCGTCCCATAAAAAACAACACTCGATGCGACACATCCTAGTACTACGAATCTACACATATTTCTATCCAGATTCGTTGTACTATAATGTGTCAAATACAGAGCTAGATTCACTTTTTGGACGGAGGGAGTAGACCATATCATGGCGTCCTCGCCTACAGCGTGTACTTCTCCCAAG | |||||||||
gi|38481399|gb|CF965488.1|CF965488 14002rsiced_14767.y1 Oryza sativa cv. LYP9 trefoil whole plant cDNA library Oryza sativa Indi CACTTTATAGTACAACGAATC EST sequence (targeted fragment marked with yellow): GTGGATCCCCGGGCTGCAGGAATCGGCACGAGGGCTCTTCCTCGGGGTGCCCACCAGCAGCACGCTGCTGTACAGTGGAGGAGTTCGAGCGGATGAAGGAGATCGCGCCGGAGAGGTTCCGGCTGGACTTCGCGGTGAGCCGGGAGCAGACGAACGCGGCGGGGGAGAAGATGTACATCCAGACGCGGATGGCGGAGTACAAGGACGAGCTGTGGGAGCTGCTCAAGAAGGACAACAGCTACGTCTACATGTGCGGCCTCAAGGGCATGGAGAAAGGCATCGACGACATCATGATCGACCTCGCTGCAAAAGACGGCATCGACTGGCTTGACTACAAGAAGCAGCTGAAGAAGTCGGAGCAATGGAATGTGGAAGTCTACTGATGGATATATATATGTTAATAATTAATTAATCCCTTTTTATCTCGATGCATGCGCAACCTGCATACGCCATCTTGCTGTACTCGATCTGATGAGATGCATGTAGATATTATACTGACGATTCGTCGACTATAAAGTGGTTTCCCATTTTCTGCTGTAAAAAAAAAAAAAAAAAA | |||||||||
gi|29615816|gb|CB620828.1|CB620828 OSIIEa06E16.f OSIIEa Oryza sativa Indica Group cDNA clone OSIIEa06E16 5', mRNA sequence CACTTTATAGTACAACGAATC EST sequence (targeted fragment marked with yellow): CTTTTTTTGGCGGATGAAACCTACTTCAATTCTTCCCCATTTTGAAACATACATTAATTCTCCTTTATATTGCCACCAAAAATTTTACAAAACCTATCCCTAATAATAACCAAGCCATCACACTAAGTAGATCAACTGTTAGGGCTCAAGATTAACCAGAAGATGATGATGATTTTGGCAGTAATTATCACTCCCTCCATCCCATAAAAAACTAACACTCGATGCGACACATCCTAGTACTACGAATCTGGATATATTTCTGTTCAGATTCGTTGTACTATAATGTGTCACATCCAGAGCTGGATTCACTTTTTTTTTTTTTTTTTGGATGGAGGGAGTAAACCATATCCATGGCGTCGTCGCGTACAGCGTGTACTTCTCCCAAGAGCGAAAGGAGGAAAAAAAAGGAGAGATGGTCAGCTAGGACACCGAATGCCTCGTGTTCCGCGACGGCGTCGACCTCGTCTCCTCGCCGGGGCTCTCCGACGTGTCGGAACTGCTGTTCTCCCCGCTGCTTGCCTTGCCAAAACACAGCTTGCTCAGTATCTTCTTCGGGATTAGCCCGCCGCCGCCGCTCCCCTTTGCTGACGCCGACGACGGGGGCGGCTTCTTGCAGGCGGCCTGA | |||||||||
gi|88528012|gb|CI456212.1|CI456212 CI456212 Oryza sativa (japonica cultivar-group) whole body 1mM ACC(1-aminocyclopropane-1-carb CACTTTATAGTACAACGAATC EST sequence (targeted fragment marked with yellow): GTTTGAAACATACATTAATTCTCCTTTATATTGCCACCAAAAATTTTACAAAACCTATCCCTAATAATAACCAAGCCATCACACTAAGTAGATCAACTGTTAGGGCTCAAGATTAACCAGAAGATGATGATGATTTTGCCCAGTAATTACCACTCCCTCCGTCCCATAAAAAACCAACACTCGATGCGACACATCCTAGTACTACGAATNTACACATATTTCTATCCAGATTCGTTGTACTATAATGTGTCACATACAGAGNTAGATTNACTTTTGGGACGGAGGGAGTAGACCATATCCATGGCCGTCGTCCCGTACAGCGTGTACTTCTCCCAAGACCGAGAGGAGGAACAACAAGGACCAGATGGTCAGCTACGACAACCAATGCCTCCTGTTCCGCGACCGAGTTCACT | |||||||||
gi|89169170|gb|CI038677.1|CI038677 CI038677 Oryza sativa (japonica cultivar-group) etiolated shoot Oryza sativa Japonica Group c CACTTTATAGTACAACGAATC EST sequence (targeted fragment marked with yellow): CCCATAAAAAACTAATATCTCCGTTCCATAAAAAACTATGGTACCGGATGTCTGATTCGTAGTACTATAATGTATTACATCCGTACTAGGGTTGATTTTTTATTAGACGGAGGGAGTAAAGTCCAACTAGTAATAATTAATATAATTAGAGTGAAACTAATACATATATTTGAGCATGATTATTTGGTAGAAGAAGCAGGCGTGAAGGAGACGAGCTCCTTGGATTTGAGCCAGGCCTTCACCACCACCACGGCGTCGAACACCCGGTCACCGCCGGCGGCGGCGCCGCCGCGGGGGTCCCTCGCGCTCGCGGCGACCTTGAGGTAGTAGGCCACGCCGGAGACGACCTGCTTCTGCGCCTCCACGACGCGTGCGAACGCGAGCTTCACCGGGACGGGGTCGGCGGGGCCGCCGGAGCCG | |||||||||
gi|88542585|gb|CI471924.1|CI471924 CI471924 Oryza sativa (japonica cultivar-group) whole body 1mM ACC(1-aminocyclopropane-1-carb CACTTTATAGTACAACGAATC EST sequence (targeted fragment marked with yellow): GTTTGAAACATACATTAATTCTCCTTTATATTGCCACCAAAAATTTTACAAAACCTATCCCTAATAATAACCAAGCCATCACACTAAGTAGATCAACTGTTAGGGCTCAAGATTAACCAGAAGATGATGATGATTTTGCCAGTAATTACCANTCCCTCCGTCCCATAAAAAACCAACACTCGATGCGACACATCCTAGTACTACGAATCTAGACATATTTCTATCCAGATTCGTTGTACTATAATGTGTCCCATACAGAGCTACATTCACTTTTTGGACGGAGGGAGTAGAACATATCCATGGCGTCGTGCCGTAAGCGTGTACTTCTCCCAACAGCGACAGGAGGAAGAACAAGGA | |||||||||
gi|88531879|gb|CI458397.1|CI458397 CI458397 Oryza sativa (japonica cultivar-group) whole body 1mM ACC(1-aminocyclopropane-1-carb CACTTTATAGTACAACGAATC EST sequence (targeted fragment marked with yellow): GTTTGAAACATACATTAATTCTCCTTTATATTGCCACCAAAAATTTTACAAAACCTATCCCTAATAATAACCAAGCCATCACACTAAGTAGATCAACTGTTAGGGCTCAAGATTAACCAGAAGATGATGATGATTTTGCCAGTAATTACCACTCCCTCCGTCCCATAAAAANACAACACTCGATGCGACACATCCTAGTACTACGAATCTAGACATATNTCTATCCAGATTCGTTGTACTATAATGTGTCACATACAGAGCTAGATTCACTTTTTGGACGGAGGGAGTAGACCATATCCATGGCGTCGTCGCGTACAGCGTGTACTTCTCCCAAGAGCGAGAGGAGGAAGAAAAAGGAGAGATGGTCAGCTAGGACACCGAATGCCTCGTGTTCCGCGACGGCGTCGACCTCGTCTCCTCGCCGGGGCTCTCGA | |||||||||
gi|38472617|gb|CF956749.1|CF956749 6158rsiceb_12491.y1 Oryza sativa cv. PA64s leaf cDNA library Oryza sativa Indica Group cDNA 5 CACTTTATAGTACAACGAATC EST sequence (targeted fragment marked with yellow): CGGCACGAGGACCATCATCATGCTGGGCACCGGCACCGGCATCGCGCCCTTCAGGTCCTTCCTGGTGGAAGATGTTCTTCGAGGAGCACGACGACTACAGGTTCAACGGCCTGGCGTGGCTCTTCCTCGGGGTGCCCACCAGCAGCACGCTGCTGTACAGGGAGGAGTTCGAGCGGATGAAGGAGATCGCGCCGGAGAGGTTCCGGCTGGACGGCGCGGTGAGCCGGGAGCAGACGAACGCGGCGGGGGAGAAGATGTACATCCAGACGCGGATGGCGGAGTACAAGGACGAGCTGTGGGAGCTGCTCAAGAAGGACAACACCTACGTCTACATGTGCGGCCTCAAGGGCATGGAGAAAGGCATCGACGACATCATGATCGACCTCGCTGCAAAAGACGGCATCGACTGGCTTGACTACAAGAAGCAGCTGAAGAAGTCGGAGCAATGGAATGTGGAAGTCTACTGATGGATATATATATGTTAATAATTAATTAATCCCTTTTTATCTCGATGCATGCGCAACCTGCATACGCCATCTTGCTGTACTCGATCTGATGAGATGCATGTAGATATTATACTGACGATTCGTCGACTATAAAGTGG | |||||||||
gi|88977676|gb|CI384158.1|CI384158 CI384158 Oryza sativa (japonica cultivar-group) callus Oryza sativa Japonica Group cDNA clone CACTTTATAGTACAACGAATC EST sequence (targeted fragment marked with yellow): GTTGAATAATTGATTGTATAGGAAACACATATAACAAGTGATATAAATAACAGCTGTACAATGGAAATGCAAGTGTGTGTGTACACAACTTGGCGGATGAAACCTACTTCAATTCTTCCCCATTTTGAAACATACATTAATTCTCCTTTATATTGCCACCAAAAATTTTACAAAACCTATCCCTAATAATAACCAAGCCATCACACTAAGTAGATCAACTGTTAGGGCTCAAGATTAACCAGAAGATGATGATGATTTTGCCAGTAATTACCACTCCCTCCGTCCCATAAAAAACCAACACTCGATGCGACACATCCTAGTACTACGAATCTAGACATATTTCTATCCAGATTCGTTGTACTATAATGTGTCACATACAGAGCTAGATTCACTTTTT | |||||||||
gi|58589748|gb|CF988056.1|CF988056 16358rsicee_13628.y1 Oryza sativa cv. LYP9 tillering whole plant cDNA library Oryza sativa In CACTTTATAGTACAACGAATC EST sequence (targeted fragment marked with yellow): GCACGAGGGGGGTGCCCACCAGCAGCACGCTGCTGTACAGGGGAGGAGTTCGAGCGGATGAAGGAGATCGCGCCGGAGAGGTTCCGGCTGGACTTCGCGGTGAGCCGGGAGCAGACGAACGCGGCGGGGGAGAAGATGTACATCCAGACGCGGATGGCGGAGTACAAGGACGAGCTGTGGGAGCTGCTCAAGAAGGACAACACCTACGTCTACATGTGCGGCCTCAAGGGCATGGAGAAAGGCATCGACGACATCATGATCGACCTCGCTGCAAAAGACGGCATCGACTGGCTTGACTACAAGAAGCAGCTGAAGAAGTCGGAGCAATGGAATGTGGAAGTCTACTGATGGATATATATATGTTAATAATTAATTAATCCCTTTTTATCTCGATGCATGCGCAACCTGCATACGCCATCTTGCTGTACTCGATCTGATGAGATGCATGTAGATATTATACTGACGATTCGTCGACTATAAAGTGGTTTCCCATTTTTT | |||||||||
gi|88384656|gb|CI556534.1|CI556534 CI556534 Oryza sativa (japonica cultivar-group) root of seedling 2ppm NAA(naphthalene acetic CACTTTATAGTACAACGAATC EST sequence (targeted fragment marked with yellow): CTTTTCGCTGTTGAATAATTGATTGTATAGGAAACACATATAACAATGATATAAATAACAGCTGTACAATGGAAATGCAAGTGTGTGTGTACACAACTTGGCGGATGAAACCTACTTCAATTCTTCCCCATTTTGAAACATACATTAATTCTCCTTTATATTGCCACCAAAAATTTTACAAAACCTATCCCTAATAATAACCAAGCCATCACACTAAGTAGATCAACTGTTAGGGCTCAAGATTAACCAGAAGATGATGATGATTTTGCCAGTAATTACCACTCCCTCCGTCCCATAAAAAACCAACACTCGATGCGACACATCCTAGTACTACGAATCTAGACATATTTCTATCCAGATTCGTTGTACTATAATGTGTCACATACAGAGCTAGATTC | |||||||||
gi|88523834|gb|CI451695.1|CI451695 CI451695 Oryza sativa (japonica cultivar-group) whole body 1mM ACC(1-aminocyclopropane-1-carb CACTTTATAGTACAACGAATC EST sequence (targeted fragment marked with yellow): GTTTGAAACATACATTAATTCTCCTTTATATTGCCACCACAAATTTTACAAAACCTATCCCTAATAATAACCAAGCCATCACACTAAGTAGATCAACTGTTAGGGCTCAAGATTAACCAGAAGATGATGATGATTTCGCCAGCAATTACCACTCCCTCCGTCCCATAAAAAACCAANACTCGATGCGACANATCCTAGTACTACGAATCTACACATATTTCTATCCACATTCGTTGTACTATAATGTGTCACATACAGAGGCTAGATTCACTTTTCGGACGGAGGGAGTACACCATATCCATGGCGTCGCCGCGTACAGCGTGTACTTGTCCCAAGACCGAGAGGAGGAACAACAAGGACACATGGTCCACCACGACACCGAATGCCTAGCGTTCCGCGACGGCCTCGA | |||||||||
gi|88284425|gb|CI405871.1|CI405871 CI405871 Oryza sativa (japonica cultivar-group) library (Kikuchi S) Oryza sativa Japonica Gro CACTTTATAGTACAACGAATC EST sequence (targeted fragment marked with yellow): GGATATAAGATGTTCGTTGTACTATAAGGTACGGGTTAATTTAAGATATGTGAATCTGATAGGATATGAAGATCAAATAAAGCAATTATCTTTTACATTCTGGTAGATGTAACTATTATTGCGACTAATATTATTCAAGGTATGATGTAAGGCCAAAGCGGAATTCACTCAAGGGCTTTGCCTTCTTAAAGATTAGTAAAGTTGATGAGGCGTGAATAGATTCAAATAATGATGGTATGTAACAGGAAGGGCATGGATGTAGGAGTTTAGCTGTTGTTGGGGTTCAAGATGTTACGAGGGATTAAATGGCAAGCTGTTCGTTATGGTTCTTCTTGGAGCATCAGGACCATTGCCCTGTCTTATTATGGAAGTGAACTCGCTGTAGGCGATTTGTCCGTGATTGTTTTGATAAANATCTTTAAGGATATCATAAAGGGGAATATCATCGGGGGGAAATCCGCG | |||||||||
gi|88558523|gb|CI489013.1|CI489013 CI489013 Oryza sativa (japonica cultivar-group) whole body 1mM ACC(1-aminocyclopropane-1-carb CACTTTATAGTACAACGAATC EST sequence (targeted fragment marked with yellow): CGTTTGAAACATACATTAATTCTCCTTTATATTGCCACCAAAAATTTTACAAAACCTATCCCTAATAATAACCAAGCCATCACACTAAGTAGATCAACTGTTAGGGCTCAAGATTAACCACAAGATGATGATGATTTTGCCACTAATTACCACTCCCTCCGTCCCATAAAAAACCAACANTCCATGCGACACATCCTACTACTACGAATCTACACATATTTCTATCCAGATTCGTTGTACTATAATGTGTCACATACAGAGCTAGATTCACTTTTCGGACGGAGGGAGTAAACCATATCCATGGCGTCGTCGNGTANAGCGTGTACTTCTCCCAAGAGCGACAGGAGGAAGAAAAA | |||||||||
gi|86867256|gb|CI337777.1|CI337777 CI337777 Oryza sativa (japonica cultivar-group) shoot Oryza sativa Japonica Group cDNA clone CACTTTATAGTACAACGAATC EST sequence (targeted fragment marked with yellow): CGCTGTTGAATAATTGATTGTATAGGAAACACATATAACAATGATATAAATAAGAGCTGTACAATGGAAATGCAAGTGTGTGTGTACACAACTTGGCGGATGAAACCTAATTCAATTCTTCCCCATTTTGAAACATACATTAATTCTCCTTTATATTGCCACCAAAAATTTTACAAAACCTATCCCTAATAATAACAAGCCATCACACTAAGTAGATCAAGTGTTAGGGCTCAAGATTAACCAGAAGATGATGATGATTTTGCCAGTAATTACCACTCCCTCCGTCCCATAAAAAACCAACACTCGATGCGACACATCCTAGTACTACGAATCTAGACATATTTCTATCCAGATTCGTTGTACTATAATGTGTCCATACAGAGCTAGATTCACTTTTGGGACGGAGGGAGTAGACCATATCCATGGCGTGGTAGCGTACAGCGTGTACTTCT | |||||||||
gi|87032251|gb|CI262033.1|CI262033 CI262033 Oryza sativa (japonica cultivar-group) Shoot and root of germinating seeds Oryza sat CACTTTATAGTACAACGAATC EST sequence (targeted fragment marked with yellow): AAAAACTAATATCTCCGTTCCATAAAAAACTATGGTACCGGATGTCTGATTCGTAGTACTATAATGTATTACACCCGTACTAGGGTTGATTTTTTATTAGACGGAGGGAGTAAAGTCCAACTAGTAATAATTAATATAATTAGAGTGAAACTAATACATATATTTGAGCATGATTATTTGGTAGAAGAAGCAGGCGTGAAGGAGACGAGCTCCTTGGATTTGAGCCAGGCCTTCACCACCACCACGGCGTCGAACACCCGGTCACCGCCGGCGGCGGCGCCGCCGCGGGGGTCCCTCGCGCTCGCGGCGACCTTGAGGTAGTAGGCCACGCCGGAGACGACCTGCTTCTGCGCCTCCACGACGCGTGCGAACGCGAGCTTCACCGGGACGGGGTCGGCGGGGCCGCCGGAGCCGCCGTGGCGGAGGCGGCGGTTGTGCTCGGCGACGGCGAAGCGGCCCAGCGACTGCACCGCCTTGTTGCTGCCCACGTCCCTGATCTCCGTCCTCCCGCCGACCAGCACGGGCGCCGCCGGCGCCGCCGCGTTCGACG | |||||||||
gi|33819953|gb|CF335790.1|CF335790 JMT--05-J18.g1 AtJMT-overexpressing transgenic rice plasmid cDNA library (JMT) Oryza sativa J CACTTTATAGTACAACGAATC EST sequence (targeted fragment marked with yellow): ATTTTTATCTCGATTTTCATGCATGCATGCGCAACCTGCATACGCCATCTTGTTGTACTCGATCTGATCTCATCTGATGAGATGCATGTGGATATTATACTGACGATTCGTCGACTATAAAGTGGTTTCCCATTTTCTGCTGTNAAAAAAAAAAAAAAAAAA | |||||||||
gi|86532942|gb|CI173148.1|CI173148 CI173148 Oryza sativa (japonica cultivar-group) supermix Oryza sativa Japonica Group cDNA clo CACTTTATAGTACAACGAATC EST sequence (targeted fragment marked with yellow): TTTTTTTTTTTTAAAAAACTAATATCTCCGTTCCATAAAAAACTATGGTACCGGACGTCTGATTCGTAGTACTATAATGTATTACATCCGTACTAGGGTTGATTTTTTATTAGACGGAGGGAGTAAAGTCCAACTAGTAATAATTAATATAATTAGAGTGAAACTAATACATATATTTGAGCATGATTATTTGGTAGAAGAAGCAGGCGTGAAGGAGACGAGCTCCTTGGATTTGAGCCAGAACTTCACCACCACCACGGCGTCGAACACCCGGTCACCGCCGGCGGCGGCGCCGCCGCGGGGGTCCCTCGCGCTCGCGGCGAACTTGAGGTAGTAGGCCACGCCGGAGACGACCTGCTTCTGCGCCTCCACGACGCGTGCGAACGCGAGCTTCACCGGG | |||||||||
gi|117239179|gb|CT849283.1|CT849283 CT849283 Oryza sativa (indica cultivar-group) cv. Guang Lu Ai 4 Oryza sativa Indica Group cD CACTTTATAGTACAACGAATC EST sequence (targeted fragment marked with yellow): AAACTACAATCCTCTCCTCTCCTTCCTTTGTCGCGAGTCACAGGCACACAGACATGGCCGCCGTGAACACAGTGTCGTCGCTGCCCTGCAGCAAAGCTGGCGCCGCCGTAGCCGGGGGAGCTCCGAGGCCGTCGACCTGCTCCGTATTCTACCCTCCTCGTTGCTGGTCCAAGCGAAGCAGCGGTAATGGCGTGCGGGCGCAGGCGTCGACGACGGAGACGACCGCAGCGCCGGCTGCGGAGGTGACTACTAAGGTGGAGAAGGTGTCGAAGAAGCAGGTGGATGGCGTGGTGACGAACAAGTACAGGCCCAAGGAGCCGTACACGGGGCGGTGCCTCCTGAACACGAGGATCACCGGCGACGACGCCCCCGGTGAGACGTGGCACATGGTGTTCAGCACCGACGGCGAGATCCCCTACCGCGAGGGGCAGTCCATCGGCGTCATCCCCGACGGCATCGACAAGAACGGCAAGCCCCACAAGCTCCGCCTCTACTCCATCGCCAGCAGCGCCATCGGGGATTTCGCCGACTCCAAGACGGTATCGCTGTGCGTGAAGAGGCTGGTGTACACCAACGATAAGGGAGAGATCGTCAAAGGAGTCTGCTCCAACTTCCTCTGTGACCTGAAGCCTGGTTCGGACGTGAAGATCACGGGGCCAGTGGGGAAGGAGATGCTGATGCCCAAGGACCCCAACGCCACCATCATCATGCTGGGCACCGGCACCGGCATCGCGCCCTTCAGGTCCTTCCTGTGGAAGATGTTCTTCGAGGAGCACGACGACTACAGGTTCAACGGCCTGGCGTGGCTCTTCCTCGGGGTGCCCACCAGCAGCACGCTGCTGTACAGGGAGGAGTTCGAGCGGATGAAGGAGATCGCGCCGGAGAGGTTCCGGCTGGACTTCGCGGTGAGCCGGGAGCAGACGAACGCGGCGGGGGAGAAGATGTACATCCAGACGCGGATGGCGGAGTACAAGGACGAGCTGTGGGAGCTGCTCAAGAAGGACAACACCTACGTCTACATGTGCGGCCTCAAGGCCATGGAGAAAGGCATCGACGACATCATGATCGACCTCGCTGCAAAAAACGGCATCGACTGGCTTGACTACAAGAAGCAGCTGAAGAAGTCGGAGCAATGGAATGTGGAAGTCTACTGATGGATATATATATGTTAATAATTAATTAATCCCTTTTTATCTCGATGCATGCGCAACCTGCATACGCCATCTTGCTGTACTCGATCTGATGAGATGCATGTAGATATTATACTGACGATTCGTCGACTATAAAGTGGTTTCCCAGCTTCCGCTGTAAATAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACTTGGCCTCGAGGGGGGGCCCGGTACCCAATTCCCCCTTAAGGGGGGCAAATAACCCCCCCCCCCGGGCCGCCTTTTAAAAACGCCGGGACGGGAAAAACCCGGGGTTTCCCCAATTTATTCCCTTTGAAAAAAACCCCCCTTTCCCCAGTGGGGGAAAAACCAAAAAGGCCCCCCCCGATCCCCCTTCCCAAAATTTGCCACCCCCAAAGGGCAAAGGGAACCCCCCCCGTAAGGGCCCAATTTAACCGCCGGCGGGGGGGGGGGGGTAACCCCCAGGGGGACCCTTACCTTGTGCAGCCCCCTAGGGCCCCCCCCTTTTCCTTTTTTTCCCTTTCTTTTCCCCCCCGTTTGCCCGGGTTTCCCCCGGCAAAGTTTAAAACGGGGGGGCCCCCTTTAAGGGTTCCCAATTTTGGGGTTTTTGGGCCCCCCACCCCCCCAAAAAAATTTGATAAAGGGGGAGGGTTCCCCTTAGGGGGCCCCC | |||||||||
gi|117236937|gb|CT855706.1|CT855706 CT855706 Oryza sativa (indica cultivar-group) cv. Guang Lu Ai 4 Oryza sativa Indica Group cD CACTTTATAGTACAACGAATC EST sequence (targeted fragment marked with yellow): GAGTCACAGGCACACAGACATGGCCGCCGTGAACACAGTGTCGTCGCTGCCCTGCAGCAAAGCTGGCGCCGCCGTAGCCGGGGGAGCTCCGAGGCCGTCGACCTGCTCCGTATTCTACCCTCCTCGTTGCTGGTCCAAGCGAAGCAGCGGTAATGGCGTGCGGGCGCAGGCGTCGACGACGGAGACGACCGCAGCGCCGGCTGCGGAGGTGACTACTAAGGTGGAGAAGGTGTCGAAGAAGCAGGTGGATGGCGTGGTGACGAACAAGTACAGGCCCAAGGAGCCGTACACGGGGCGGTGCCTCCTGAACACGAGGATCACCGGCGACGACGCCCCCGGTGAGACGTGGCACATGGTGTTCAGCACCGACGGCGAGATCCCCTACCGCGAGGGGCAGTCCATCGACGACATCATGATCGACCTCGCTGCAAAAGACGGCATCGACTGGCTTGACTACAAGAAGCAGCTGAAGAAGTCGGAGCAATGGAATGTGGAAGTCTACTGATGGATATATATATGTTAATAATTAATTAATCCCTTTTTATCTCGATGCATGCGCAACCTGCATACGCCATCTTGCTGTACTCGATCTGATGAGATGCATGTAGATATTATACTGACGATTCGTCGACTATAAAGTGGTTTCCCATTTTCTGCTGTAAGGGGCCGTTTTGGCCCCTCGGGGGGGGCCCGGGTCCCCATTCCTCCCTATAAGGAGATCTTTTTAACGCCCCCTCCCTGGCCCCCTTTTTTTAACACCTCGGAATTGGAGAAAACCCGTGGGTTTCCCCCATTATATCCCCCTTGCCCCACCCCCCCCCCTTTCCCCACGGGGGGGAAAAAACAAAAAAGGGCCCCCCCAGTTTCCCCTCTCCCCCAAGTTTGTCGCCGCCCGAAAGGGGGGAAGGGGGAGCCCCCCCCGAGGGGCCCCCCTATAAGGCCGGCGGGGGGGGGGGGGGGTTTACCCCGACAGGGGGGCCCTTCTCCCTCTTTTTGGGCGCCGCCCATAAGGCCCGCCCCCCCTTCTTTTTTTTTTTTTTTTTTTTTCTTTCTTTTTTTTTTTCCCTCCTCTTTTTTTCGCGGTGGTTTTTTTCCCCCTTCAAGAAAAAATTATATAAATAAAAGAGGGGGGGGGGGCTCCCCCCTTCTCTTTTAGTGTGAGTGCTTTTATAATTATATTAATATATTGTGTTGTTGTTTCTATCTCTGTGGGCGCGCCCCCCTCCGCCCCCCCC | |||||||||
gi|117250648|gb|CT857171.1|CT857171 CT857171 Oryza sativa (indica cultivar-group) cv. Guang Lu Ai 4 Oryza sativa Indica Group cD CACTTTATAGTACAACGAATC EST sequence (targeted fragment marked with yellow): ACGACGTGAGCTGTGTTTGTTCTGTTCTGTTCTGAATTCTGATCCAACAACGTCCCAACTACCGGACTTATTCAGAGGACATGGAACTTCTCGCTGAATCGGCTGGAAATTCCATATCCGGACATGCTTTCTTTTCAGATTCGTTGTACTATGAAGTATATGTCCTATTCGATACTAGGTTGCTATATTACTAAGTAGAAAATCATCAAAACAATGCATGGGGCTGGTTGACATGTATTGTTCTTATAGAGTTGGCATGTAATTGCTAAGGGTTGTGTGAACAATGATGGAGAATTTGATAGGAACTTTTTTGTAGGATTTTATTATATTGTAGTCTTTTCCTTGCAAGTCCTTTAGCTTTGCTTGCACTTTGCAAGAGGCACTTTCTTTTGGGTATTCTTCTTCTTTTTTGCAAGGGGGTATTGCCCCATTTTCTTTTGGGAATTTTGTGCTTTAGTTCATGAGGATCTGGAAACAGGTCATTTTTCCCCTGACTCCAAAATGAGCATGCAATGATGCAAGCGTCCAATTGCAAATACTTTCTATAATCTTCTGGAATTCTCTGATGGTATTGCTAGGTTCAACAGGTCCAAGAGGTGCATCAAGAAGTTGCCCTTCCTGTAGCACCATCTATCATCAATGATGTTGGACAGAAGATGGCGGGGAACATACTTTTGCTCATCTGTCTTGGCTGCAATGCCTCAGGGACTTATGTTTGCGCCAACACAATCCCTTCGCCGGAAAACTCGCCGTCGGAATTCGCCCAGAATTGTTCAGTCTAAACCAAACAAAGCCTGCCCCCCGTGTTCATCGGGCGGCGGGGAACATTCGGGTCGCCGCCAATCGCTGGGCAAAACCCGGGCAAGGAGGGTGAACCCCCCCCCGGGCCCCAACGAACCAGCTCTCGGCACCAATGGGCCAAATTCCCCGGAAGGAAGCCCAAACTTTGGGGGTCCCCCCCCAACCTCCCCCGGGGGTTCCCCCCCGGGCAAAAAGGAAACCCCCCCCGGGGGGGGCCGGGGGAAAAAAATTTGTTGGGCCCAGGGACCCCCCGGGGAAACACCGTATCTCTTCCCCCCCCCCCCCGGGGAAAGGGCCCCACCCCCCCCCCCCCCCCCCCCCCCCTCCCCCCCCCCGCCCCCCCGCCCCCCCCCCAACCCGCCCCCCCCCCGTGGGAAAAGGGGGGTGTTCCTAGAAGAAGCCGGGGGGGGTGGGGCTGCCCGGGGGGGCGCCCCCCCCGCCCCGCTCTGTTTTAAGGGGCGGTCTCTCTCCCCCTCTCCCCCGCGGCGGGGGGTGCGGTGGTGG | |||||||||
gi|109712534|gb|CI105142.1|CI105142 CI105142 Oryza sativa (japonica cultivar-group) Panicles one day after flowering Oryza sativ CACTTTATAGTACAACGAATC EST sequence (targeted fragment marked with yellow): TCTTTTCGCTGTTGAATAATTGATTGTATAGGAAACACATATACAATGATATAAATAACAGCTGTACAATGGAAATGCAAGTGTGTGTGTACACAACTTGGCGGATGAAACCTACTTCAATTCTTCCCCATTTTGAAACATACATTAATTCTCCTTTATATTGCCACCAAAAATTTTACAAAACCTATCCCTAATAATAACCAAGCCATCACACTAAGTAGATCAACTGTTAGGGCTCAAGATTAACCAGAAGATGATGATGATTTTGCCAGTAATTACCACTCCCTCCGTCCCATAAAAAACCAACACTCGATGCGACACATCCTAGTACTACGAATCTAGACATATTTCTATCCAGATTCGTTGTACTATAATGTGTCACATACAGAGCTAGATTCACTTTTTGGACGGAGGGAGTAGACCATATCCATGGCGTCGTCGCGTACAGCGTGTACTTCTCCCAAGAGCGAGAGGAGGAAGAAGAAGGAGAGATGGTCAGC | |||||||||
gi|86523045|gb|CI163251.1|CI163251 CI163251 Oryza sativa (japonica cultivar-group) shoot and callus Oryza sativa Japonica Group CACTTTATAGTACAACGAATC EST sequence (targeted fragment marked with yellow): AGTACAGTCCGGACAAACCCTGTTTATGTGCTATTGCAACATTTCCATACGGGCCTGGATAAGGAGTCTGCATTCTATCTGGATTCATTGATTTCAAAATGTTGCTACCTATTGCAAAATTAGACATTTCCTATCTATCTAGATTCATTGTACTATGAAGTACAACACTCCCTCCGTTTCACAATGTAAGTCATTCTAGCATTTCTCACATTCATATTGATGCTAATGACATATATATCTGTCTAGATTCATTAACATAAGTATGAATGTGGGAAATGTTAGAATGACTTACATTATGAACGGAGGATGTATCTAATTAATCATATACCAGGTAGTAATATTTTTTATAAGTAATATATGAAAATGGCACTTCCCCACAAAGCCTATATGTCTTTAATCGTAATCTATATGATTAAGCGGGATTGGGTTAACAAAATGGCTCTCGAACATATCCTTTAGCCCCAGGCTATTGCTGAAGCCATTCTTCTTGCCATGGTATAGGAGGGTGGCGGACATGCACAGGTTGGCGATCCGCTGCACGAACGGGAGGAACGCGCGGTGCTTGAAGCG | |||||||||
gi|30227276|gb|CB965168.1|CB965168 NL17_D08 Drought stress (leaf) Oryza sativa Indica Group cDNA clone NL17_D08 3', mRNA sequenc CACTTTATAGTACAACGAATC EST sequence (targeted fragment marked with yellow): TTTTTGGCCCTCGTGTCCTAGTTTTTGTCTCGTAGGTCCGTGAGCTAGTCGTATCTCGTCTGGGGAGTATGTATGTACTATCCTGTACTCGGTTGTTCGGTGTACTTGGACGTGCTGTGGGATCTGCTCAAGAAGGTCAACACCTACGTGCTACATGTGCGGCCTCAAGGGCATGGAGAAAGGCATGCGACGACATGCATGATCGACCTGCGCTGCAAAAGACGGCATGCGACTGGCTTGACTGACAAGAAGCAGCTGGAAGAAGTGCGGAGCAATGGAATGTGGAAGTGCTGACTGATGGGATGATGATATGATGGTTGAATGAATTAATTGAATGCCCTTTTTGATGCTGCGATGTTTCATGCATGCATGGCGCAACCTGGCATGACGCCATGCTTGGTTTGTACTCGATCTGATCTCATCTGATGAGATGCATGTAGATATTATACTGACGATTCGTCGACTATAAAGTGGTTTCCCATTTTCTGCTGTAAAT | |||||||||
gi|88996188|gb|CI037479.1|CI037479 CI037479 Oryza sativa (japonica cultivar-group) etiolated shoot Oryza sativa Japonica Group c CACTTTATAGTACAACGAATC EST sequence (targeted fragment marked with yellow): TTTAAAAAACTATATCTCCGTCCATAAAAAACTATGGTACCGGATGTCTGATTCGTAGTACTATAATGTATTACATCCGTACTAGGGTTGATTTTTTATTAGACGGAGGGAGTAAAGTCCAACTAGTAATAATTAATATAATTAGAGTGAAACTAATACATATATTTGAGCATGATTATTTGGTAGAAGAAGCAGGCGTGAAGGAGACGAGCTCCTTGGATTTGAGCCAGGCCTTCACCACCACCACGGCGTCGAACACCCGGTCACCGCCGGCGGCGGCGCCGCCGCGGGGGTCCCTCGCGCTCGCGGCGACCTTGAGGTAGTAGGCCACGCCGGAGACGACCTGCTTCTGCGCCTCCACGACGCGTGCGAACGCGAGCTTCACCGGGACGGGGTCGGCGGGGCCGCCGGAGCCGCCGTGGCGGAGGCGGCGGTTGTGCTCGGCGACGGCGAAGCGGCCCAGCGACTGCACCGCCTTGTTGCTGCCCACGTCCCTGATCTCCGTCCTCCCGCCGACCAGCACGGGCGCCGCCGG | |||||||||
gi|86873645|gb|CI316307.1|CI316307 CI316307 Oryza sativa (japonica cultivar-group) shoot Oryza sativa Japonica Group cDNA clone CACTTTATAGTACAACGAATC EST sequence (targeted fragment marked with yellow): AGATCAACTGTTAGGGGTCAAGATTAACCAGAAGATGATGATGATTTTGCCAGTAATTACCACTCCCTCCGTCCCATAAAAAACCACCACTCGATGCGACACATCCTAGTACTACGAATGTAGACATATTTCTATCCAGATTCGTTGTACTATAATGTGTCACATACAGAGCTAGATTCACTTTTTGGACGGAGGGAGTAGACATATCCATGGGGTCGTCGCGTATAGCGTGTACTTTTCCCAAGAGCGAGA | |||||||||