miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse




mature miRNA: CCTGAGGGGAAATCGGCGGGA
species: Oryza sativa
database: miRNEST
The numbers on the right side of the alignments show a score calculated for them.
When calculating the score, a mismatch is given a score of 1, bulge: 2, and wobble: 0.5.

Predicted miRNA targets
gi|117221665|gb|CT852783.1|CT852783 CT852783 Oryza sativa (indica cultivar-group) cv. Guang Lu Ai 4 Oryza sativa Indica Group cD

CCTGAGGGGAAATCGGCGGGA
|||||||||||.|||||..|
AGACTCCCCTTTGGCCGCTTT

EST sequence (targeted fragment marked with yellow):
AACCCTAGCCATTCCTCAATCCTCTTGACCTCTCCTCTCCCCCAAAAGAGCGGCGACGGCGGCGGCGGCGGCAGCGGCCATGAGCCTGTGATATACGTCGACCTGCGACACGATTCTTTGGTGGCTGGGCTGCGGAGTTAGAGTCTCGGAGGCAGCGACGGCCTCGACCTGTAGACTCGCGACTTGGGGCTGCTGAGGAAGAAGTTTCTTTCGAGTTTTGAGTTTTGACGCCATGCCCTAGCCGGAGCAACAAGCAAGTCAGACAGCCCGCTATAGCCTTTCTTAGCCTCTACAGATACCAGCCGCTAAAAGCCATAGCCAGCTATTTTGAACATTGAAGTGGAGTTGGCCAATGGAGCTCGAAGCGGTGCGGATTTGGGTGGCATAGGCCGACAGAGCTCGGGGCTTCCAACCGCCGCCTCTTGTTCACACCGCCTCCCTACTCTTCAGTGTGCCGCCATCCACCGTCCCCCTCCTCGTCGCCAAGGTGCTGGGGCAGATCAGGATGCCGTCTCCGCCGCTCATCCTCTAAAGAGTTGCCGCCTACCTCCCTCAGGCACGACACGAAGGAGCTCGATGGTGATAGCGACGGGAAGCTCCGTGTGGCATCATTCTTCTTCGCGTTCAGTCCTTTTTGGTTGTCGCCGCCACTCAAAGCTCTGTGCTGGGGAACAGGGGCACCGCGTAGTAGCCTCATGGGCCTGACAAAGGAGGGGGGGCCCGGTACAGGCCCCAGCGCCCGCCCTTTTCCTTTTTCTCTTCTTTTTTCCCCTTTCGCCGGTTTCCCCTCAGACTTAAATAGAGGGGTCCCTTTGGGGTTTCGTTTATGGTTTTTGGCCCCCCACCCAAAAACCAAATTAGGGGGAGGTTGGAGGGGGGCGCCCCGCAAAAAGGTTTTCCCCTTTGCTGGTGGCCCCGTTCTTTTTTGGATTCTTTTCTCTGGGCCACCCCCCCCCACCCCCTCCTCTTTTTTTATAATTTTCTTTTTCTTTTTTAATATTTTTATTAATTTAAATTATATATATTTTATGAGTTTGGAGGGGAGATAGATGGTGGTATAGATGCACGG



gi|88209069|gb|CI208918.1|CI208918 CI208918 Oryza sativa (japonica cultivar-group) same as Lib 33(supermix) Oryza sativa Japonic

CCTGAGGGGAAATCGGCGGGA
|||||||.||||.| ||.|.|
GGACTCCTCTTTGGACGTCTT

EST sequence (targeted fragment marked with yellow):
TAATACACGATTTTTCTTTCTCAAAAAAATTAAACAGTAATGCTTACAACATCTGATGCTGGCCCGTTGCCTGGCCACCCCTATCCAGGAAAACTGAATATTCTCCTGAGTTGGTTACAGTAAGATCTATCGAGGTAAAAAAAATGAGCAGATATAGCAATGGAGAGCGAGACGCACTGTAACAGAACGAATCTACCGGGGACTAGCTTCTGCAGGTTTCTCCTCAGGGCTATCCAGCACATCCCCAACTCCGACTGGTGGACCGATGCTACAGCGAGCAGTGTTGTGAACAGCAATTGCATCCTTCAGTTTCTGAAACTTCGCCAAGGAACATGAGAACGCCTCCAATTGCCCGTCAGCTCCACGGTAAAAATGGAAGTAAGGAAGGACTTTCACATTCAACCGTTTGCACATAGGTTTATTTTCATCAAAATTTACTTTTAAGAACAAGATATCAGGATTCTCCACAGCTGTTCTGCAGAGCCTTGGGAAGAGTGCCCTGCAAGAACCACACCAAGTTCCATAAAACTCCACAATTACAAGCCTGTCGCCTGCATCCCTCAGTGCATCCAAGAACTCTTGTGTAGAGTGGATGTCAAT



gi|88838949|gb|CI012825.1|CI012825 CI012825 Oryza sativa (japonica cultivar-group) etiolated shoot Oryza sativa Japonica Group c

CCTGAGGGGAAATCGGCGGGA
|||||||.||||.| ||.|.|
GGACTCCTCTTTGGACGTCTT

EST sequence (targeted fragment marked with yellow):
GACACACTATATACACGATTTTTCTTTCTCAAAAAAATTAAACAGTAATGCTTACAACATCTGATGCTGGCCCGTTGCCTGGCCACCCCTATCCAGGAAAACTGAATATTCTCCTGAGTTGGTTACAGTAAGATCTATCGAGGTAAAAAAAATGAGCAGATATAGCAATGGAGAGCGAGACGCACTGTAACAGAACAAATCTACCGGGGACTAGCTTCTGCAGGTTTCTCCTCAGGGGCTATCCAGCACATCCCCAACTCCGACTGGTGGACCGATGCTACAGCGAGCAGTGTTGTGAACAGCAATTGCATCCTTCAGCTTTCTGAAACTTCGCCAAGGAACATGAGAACGCCTCCAATTGCCCGTCAGCTCCACGGTAAAAATGGAAGTAAGGAAGGACTTTCACATTCAAC



gi|117231137|gb|CT860209.1|CT860209 CT860209 Oryza sativa (indica cultivar-group) cv. Guang Lu Ai 4 Oryza sativa Indica Group cD

CCTGAGGGGAAATCGGCGGGA
||||||.|.|||||| ||||
GGACTCTCTTTTAGCGCCCCT

EST sequence (targeted fragment marked with yellow):
GCGGGGCGGCCGCTCTGACTAGTGGTCCCCCGGGCTGCAGGAATTCGGTAGGCCTTCCAGGCCAGTCCGAAACAACCTGAGCAATTCCACCGTATTCTCGGGGGAAGCTAACCGCGATGGCCTCTGCTCTCGCCGTTGCTCGGCCTGCGGCTCTCGTTCCGCGCGGCGGCAGCGAGAGCATCACCGGGAATCTCCCCATGCTGCCTGCAGTGCCAAGCACCAGATTTGTTTCAGCATTGAGTATCATGTGCTCTAATGTGCTCGTATGCAGGGAGGATGAGGAGTCGCAATGTCGTCGCTGCAAAGGCTGCCCAGGACAGTTCAGAACCGTCATCCGGGAGCGTTGTGAAGTATGTCCAGAGTTCGTTCAGCACTCCTGAAGACCTCTTTGCTCTAGCTGGTATAGGATTTGCAGGGATTGCCGCATTATGGGCTTCTATAAATCTTGTAGAGGTCATCGACAAGCTTCCTGTTCTCCCTCTACTCTTTGAATTAATTGGCATATTGGTTGCATGGTTGTTCATATATCAAAACCTACTATTCAAGCCAGACAGGGAAAAGTTTCTGAACAACATCAAGAGTTCCGTATCTCGCGTCTTGGGGCAGTAATTTGAGGCGAAAATGGAGCACAAGCAGCCTTAACTCTTGCCGTCGTGATTCGCTTTCTTCAGACCTGGAGAAACCAATGAATATTTAACTGTATGTGCAAAATGTGAGAAGCTTGTTTTTCGCCATTGTCCACTCAAGAAGCAATGTCCATTTCATGTACAGGATAGAGTGATATCAAGTGTTCTATTAATAGAAAAAAAAAAGTCTTTCTTGTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGGAAACCAAAAAAAAAAGAGGGGGGCCCGGTAAAAAAATTGCCCCATTTAAAAAAAAAAAAAAAGGGCGGGGGCGGGCGGGGGCCCGGGGGGGGGGGGGGCGAGCCCAAACCCCGAAAGGGGGTCAATAAACCCCCCCCCCCCAGGGCCCCTTTTTAAAACATGGGGGGAAGGGAAAAAAAGGGGCCACCCCACAACTTTCCCCAAGAGACACCCCCCCCCTTTCCCCAGGGGGAAAAAAAAAAAAAGGGCCCCCCCAACGCCCCCCCCCCCCGATGTGCTCCCCCCCAAGGGGGAGAAGAAAACCCCCCCCCCCCCCGCCCCCACCCCCCCGGGGGGGTGGTGTGGGTTTTTTTTTCTGGCCGCCCCTCCCCGTTTTTTTCCCGCGCCACACCCCCCCCCCGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGGGCGGAAACGGGGGAGTTTCACAGGGTTTTTTTTCCCCGCGATTTTCTCTCAGGGGGGGTGTGTCACAACGCACCTCCCGGGGCCGGGTTTTGCCCTCTTTTCCCCTTTTTTAACCCAGGCCCCGGAAGCGGGAGGCTTTATTTCTTACTTTCATGGTGGGTTGGGAGTACTCCCCCCTTTATTTTTTACCATTAAATTTTTCGGCTCCCCAATTTCCTTTTTTCACTGTTGGCTTTTTAAAGGTTTTCCTCACCCCCAACAAAAAATATGGGCGAGAAAAAACTGTGGTTGCCCCCCTTTAAGAGTGGAGAGGGAGCAGGCCAGATTTACTTACCCAAACCCTGACCATGGGGGGAGATTGCCCTGATATTCTTCTCCTGGCATAGTAGTACATATTCAGATTACAGAGGCGGAGCCCCGTCGAGAATGAAGCTAAGTAGACTGACATCTAGGGGTCGAAGAGGCGGCCGGCGCAGCGGCATTTCCAACCCAGCGGTTTTGTAGTTGGAGTACTGCGCGAACCCGGCGACATCAACTCGGTCGGCGGCGCTCGCCGGGCGGCTAACCCCCGGCAGCGCCGCCACCTGGACGGGCGTGCAGGGGTTGCACGCGTTGCACCGGTTGTGGCAGCTCGGCGGCGTCGACCCCAGCCGCGACTTGTCCTCCGCTAGGCTCTGAGAAGAAGACAGCGTCGTGCTGCGGATGCCGGCTGCAGCTCCGAGAAGGAAGCTCACCAGAATCATGGCCACTAGGAATGCTCGGTGAGGTGATCTCACGGCCATGAGACCATCTCGTTACAGCCAGCTAGTCTGTATTGGGGAGAGGTTGCCGAGAAGAGTGAAGCCTCCTGAACAGTAAAAGAAAAGAGAAGCTTCTTTGTGAAGCAGTGAGATTGGACAGTAAGCTAGCTGCTAGCTTTCTCCATGCGTCACCCTAGATTAGTAGAGACGACGCAGCTAGCTAGCTGGTTCTCCTTGGAGCTAAGGTTGGAGATGCGCAGCGATGGCGGCAGAGGAACGTAAGAGAGGAGAGTGGTCAGTGGCCTAAACGAGTACTAGCAAATTTGCGAAGTTCACGTTGTCTCGACTGGCCTGGAAGGCCTAC



gi|89174371|gb|CI110569.1|CI110569 CI110569 Oryza sativa (japonica cultivar-group) Panicles two weeks after flowering Oryza sati

CCTGAGGGGAAATCGGCGGGA
|||||||.||||.| ||.|.|
GGACTCCTCTTTGGACGTCTT

EST sequence (targeted fragment marked with yellow):
CGAGGTCTAATTGCCCAATGAAGAATTCTTCCGCTAAAATGATGTACAACTCTATGGTTCTTTTAGACAAGCATAAGAAGTTGACACACTATAATACACGATTTTTCTTTCTCAAAAAAATTAAACAGTAATGCTTACAACATCTGATGCTGGCCCGTTGCCTGGCCACCCCTATCCAGGAAAACTGAATATTCTCCTGAGTTGGTTACAGTAAGATCTATCGAGGTAAAAAAAATGAGCAGATATAGCAATGGAGAGCGAGACGCACTGTAACAGAACAAATCTACCGGGGACTAGCTTCTGCAGGTTTCTCCTCAGGGCTATCCAGCACATCCCCAACTCCGACTGGTGGACCGATGCTACAGCGAGCAGTGTTGTGAACAGCAATAGCATCCTTCAGTTTCTGAAACTTCGCCAAGGAACATGAGAACGCCTCCAATTGCCCGTCAGCTCCACGGTAAAAATGGAAGTAAGGAAGGACTTTCACATTCAACCGTTTGCACATAGGTTTATTTTCATCAAAATTTACTTTTAAGAACAAGATATCAGGATTCTCCACAGCTGTTCTGCAGAGCCTTGGGAAGA



gi|88340051|gb|CI650498.1|CI650498 CI650498 Oryza sativa (japonica cultivar-group) germinating seeds Oryza sativa Japonica Group

CCTGAGGGGAAATCGGCGGGA
|| |||||||| . |||||||
GGCCTCCCCTTCGCCCGCCCT

EST sequence (targeted fragment marked with yellow):
ACTCGAGTGCTCGCCGCCGCCGCCGCCGCCGCCGTCGCCGGCGATGCACCTCGGCGTCTCCCTCGTTCCACCCCTCCCGCTCCANTTCCCCCGCCGCGCGCCCTATGGATTCCGCTCCGCTGCTCCCCGCCGGATAGCCGTTTGCCCCCTCCTCTCCGTCGGTCGGCGCCGCCGGTTGGGGGCCCCACCGCGCGCGGCGCGGGGAGGTGGGGAGGGGCCCGAGGAGGAGATGCGGAGGCTGCTGGAGTTGCTCCCCGGGGAGCTGAGGCGGCGGGTGGAGGGGCACCCGGAGCCCCCGGCGCTGGTGGAGGTGGTCATGGACCTCGGCCCGCCCGCCGCTCCCGCCCGCTTCCCCTCCGGCGAANTTCTCCTCTTGCAGAGCCCCATCTTGTTGGAG



gi|58606680|gb|CK034713.1|CK034713 40788rsiceg_9892.y1 Oryza sativa cv. 93-11 tillering whole plant cDNA library Oryza sativa cD

CCTGAGGGGAAA-TCGGCGGGA
| |||||||||| |||||.|||
GTACTCCCCTTTTAGCCGTCCT

EST sequence (targeted fragment marked with yellow):
ATTTCCTGCCGATTTTCCCCTCATGAGCCAGCCGAATCCCTCTTCCAGCGTGATTTCCAGGATCCCTTTGTCTTGTTGAGAGATTTTTGCAGGTTTCGTTTGCATTTGCGGGGCGGGCATATATGGCTGCAGTGTGGAGCGGCTGCAGCACGAGCTTCAGCCAAGAACTTCCCCCACACCCGCGTGGAAGAAGGGGCGGTGATGGGGCAAGAATCCATCCATGGAGCGGAGGAGCGGGCAGAGACGCCACCAACCGCCATGCGGAAGCTGCAAGGACCGTGGTTGTCTTCGCCAGAGGGCGCGTGCGCG



gi|29618591|gb|CB623603.1|CB623603 OSIIEa11H16.f OSIIEa Oryza sativa Indica Group cDNA clone OSIIEa11H16 5', mRNA sequence

CCTGAGGGGAAA-TCGGCGGGA
| |||||||||| |||||.|||
GTACTCCCCTTTTAGCCGTCCT

EST sequence (targeted fragment marked with yellow):
CTTCCTCTTCTCCACCCTCCTATCCGTTCTAGCGAAGGACCAAATTTCTCACCAGATTTCCTGCCGATTTTCCCCTCATGAGCCAGCCGAATCCCTCTTCCAGCGTGATTTCCAGGATCCCTTTGTCTTGTTGAGAGATTTTTGCAGGTTTCGTTTGCATTTGCGGGGCGGGCATATATGGCTGCAGTGTGGAGCGGCTGCAGCACGAGCTTCAGCCAAGAACTTCCCCCACACCCGCGTGGAAGAAGGGGCGGTGATGGGGCAAGAATCCATCCATGGAGCGGAGGAGCGGGCAGAGACGCCACCACCCGCCATGCGGAAGCTGCAAGGACCGTGGTTGTCTTCGCCAGAGGGCGCGTGCGCGTGTGCAGGGCGGCGGCTCCATGCGTTCTTGAACCCGACGTCGCCGGCAAGGAGGAGGTCGGTGTGGCGGTTTGGGGCATGGACGATGAGCCGCCGGTCGCTGATGGTCACCGGAGGCACGGGCTGCGGCGGCGCCCGGTGAGGCCGGCTGCTGTGGAGGAAGGCCCCGTCGCCGCAGCAAGAAGCGCGGCGTCGGCGTCGGCGTCAGCCGCGGGGAGCAAATCTGAGGTCGGGGGATCGAGGCTGCACTTCTTGGAGGAGAGGGATGAGGAGATGCTGTCCAGGAGGTTGATCAAGCTCAGCCAGTCCAACAAGGTCAGGAGTGCCACCGAGCTGTTCGATTCAATGCGTGCCTCAGGCTTGCAGCCGAGCGCGCATGCCTGTAACTCCCTTCTGGCTTGTTTTGTGCGAAGGGGNTCTTTCGCCGATGCGATG



gi|88393716|gb|CI621211.1|CI621211 CI621211 Oryza sativa (japonica cultivar-group) callus Oryza sativa Japonica Group cDNA clone

CCTGAGGGGAAATCGGCGGGA
||.|||.|||||| |. ||||
GGGCTCTCCTTTATCTTCCCT

EST sequence (targeted fragment marked with yellow):
GACATAAACCGAGCTCCTCAAGCTCTCTTTCTCTCTTTCTCTCCCATGTCCGGCCATTAGTACCAGCGGCCGATCTCCCTCACCGGAGCTTCGCAAGCCAAACCCTCGCGCCACCAACTCCGCCTCGTCGAGGTGATTCCATTTTTCCCTTTCCCGATCACTCCACCTTGAGATAAACCGACACCACCACGTTCTCTTATCGGCCGGTCTGAGATCTTGCTACCGCCGTTCCGGCCATCTCCCTCTCTCCCTCCGCCTTCCACCACTTTCCCCGGGTGCGCGTTGCTCGGAAACACCATCTCCCACCGGCGTTCCTACCTCCCGGCCAACAGAGAGCCGGCACCTCGCTCGCTCTCCCTTCTATTTCCTCTCGGGTGGCAG



gi|66932001|gb|CX118849.1|CX118849 EI117A06 A normalized whole-life-cycle cDNA library of rice Oryza sativa Indica Group cDNA cl

CCTGAGGGGAAATCGGCGGGA
||..||||||||.|.. ||||
GGGTTCCCCTTTGGTTCCCCT

EST sequence (targeted fragment marked with yellow):
TGGCTCGGGTCGGAATCCGGGNTGACCACGCGTCGCCACGTGTCGCCACGCGTCGGAAAGGCGTTTCGTACTCGCCTCTCTCCGCGCCCTCCTCCGCCGCCGCTCGCCGCCGTTCGTCTCCGCCGCCACCGCCGCCGCCATGAGGGAGTGCATCTCGATCCACATCGGGCAGGCCGGTATCCAGGTCGGGAACGCGTGCTGGGAGCTCTATTGCCTCGAGCATGGCATCCAGCCTGATGGACAGATGCCCGGTGACAAGACCGTTGGGGGAGGTGATGATGCTTTTAACACCTTCTTCAGTGAGACTGGTGCTGGGAAGCATGTCCCCCGTGCTGTCTTCGTCGATCTTGAGCCTACCGTGATTGATGAGGTGAGGACTGGTGACTACCGCCAGCTCTTCCACCCTGAGCAGCTCATCAGTGGCAAGGAGGATGCAGCCAACAACTTTGCCCGTGGTCACTACACCATTGGCAAGGAGATTGTTGATCTGTGCCTTGACCGCATCGGGAAGCTTGGCGAACAACTGCACTGGTCTCCAGGGTTCCTTGTGTTCACGCTTGTGGACGGAGACGGGGCTCCGGTCTCGGGTCCTTCTCTTGAAGCGTTCTCTGTGGACTATGGCAGAGTCCAGCTCGGTCCCGGGTCCCGGTCCCCTTGGTTTCCCCTTGGGGGTAGCCTTCAAGGTCTTTCACATTCCTCTGACACCGATTCTGTCTGCTAATAGGCTTTAATTGGCCGTCCTAATGAGGCACTACACTTAGGGGTTCCGGCATGCAGAGCCCGAGAGGGCTAAGTTTAGACCAACGTGTCCGAAAAGTTTACACCGGTTACGAAGAAACT



gi|88531413|gb|CI459887.1|CI459887 CI459887 Oryza sativa (japonica cultivar-group) library (Kikuchi S) Oryza sativa Japonica Gro

CCTGAGGGGAAATCGGCGGGA
||||| |||||||||.| | |
GGACTACCCTTTAGCTGGCAT

EST sequence (targeted fragment marked with yellow):
GGCTTGCAATATACAACATATATTAAAAAGAACATATGATAATGTGGATTGTATGACTGACTTCTCTAGTCTACAACTTGCAAAGGGACCACATATAATTTTGACTTCAAACATTTTGAAACTGCGACAAACAATGCAATGAAGGGCGTACAAAGAATTTAAACTGCAAATTCTTGTCTTGCACTATTCCGCCGTAGTCACTGTCGGATTTCAATAACCACCTCTACCGATTCTGGCATATCTGGGCCATCCTGCTGGCTTCTGTGTTCTTGATGAACTGGGAGGAAATGAGATGTTGGATTAACAGAACTCTCAGGGAGGGTGGGGGGTTGAGACATGGTAGGAGCAGAGGATACGGTCGATTTCCCATCAGGCAGTTCTTTCAATGAGATCCGGCATATTGGGCCAGTAGTCTGCTTCAGCAACCATGCCT



gi|117217474|gb|CT852091.1|CT852091 CT852091 Oryza sativa (indica cultivar-group) cv. Guang Lu Ai 4 Oryza sativa Indica Group cD

CCTGAGGGGAAATCGGCGGGA
||||||.||||||||| |||
GGACTCTCCTTTAGCC-CCCA

EST sequence (targeted fragment marked with yellow):
AGGCGCTGCTCCACGCGACCACGCCGCCACTGTCGTCCACGCCGGCGCCGCGCCGTCCCCGCCGTCGTCCGCGCCGTCCCCACCGTCCAAGCCGCCAAGCCGGGGGCCGCGACGCTGCGACAGCGATTCCTCCAGTCCTCCTCGCCGCCTCGCCGCTTGCGGGTTGCCGGCTTGGTGGCTTGGCGCGGCTTGCCCGCCCGCCTTCTCCAGTTCTCTTGCTTGGCTGCTCCACGTCTCCACTGATCCGGCGCTCCACCATTCAGCCCAGGATTGGTAAAACATGAAGAGGAGCGGAGATATTGCGTCATTATTTGGGAACCATGAAGCAAAAACAATGGAGATTCCAGAATCTTCTAGTTCTTCGAATGTATTCATTGGTGATGAAACTCCTGTACCTGAAGAAGAACCACGACAAGTTCCTACAGATGCTTTTCCACGTGCACCTCCTGTTCAACGAAATGCCTCTTCGGTATCGGCCACCATGGATAGGCGTCCTGGGAGGCACAAGCTCAGGCGGGTCAAGGCCCATGTGCGCGCTGCCCGAATGGACCGGATCAGTGGCCTCCCCGACAAAATCCTCCACCACATCATGTCCTTCCTGAACGCGCGCCAGGCTGTGCAGACGTGCGTGCTGTCCCGGGCGGTGGCGCAATCTCTGGCGCACCATGCCCCTGCATCAACGCCGACTTCGATGAGTTTGATTTCATTGCTTAACAAGGGGGACAATGAGGACTACAATGACCAAGTGGCATTTCAGAAGGTTCGTTTAAACAAATGTTGGGGAACTCCGCGAATTCCACCCGCCATGAATAAAAAACATTCGGGGTTCACTACATAATAAGGGGGACGGGGACAATGGAAAACAGGGATTTCCAATGGAAAATGCCCAACAGGGGGGATTAACCCTGGGTTTTGCAAAAAACAGGGGCAAGGGGGTTTACCGAGGGTTTGTCGGGGTTTCCCCTTTTTCCTTTGGAAACCCCCGATTTCCTCTCAGGGGGGTTTCACTTTCTTGGGCCTCACCCTGGGAAAAAAAAAATTTGGGGGTTTTTTCCCCCTTGGGTTTTTTTTTTTTTTTTATCCCCACAGGGGGTTTTTTTTTTTTTTCACAGAACAAAATACTTTTTTGGGAAACACACCCGGGGGGGGGTGTGTTTTCCCCCCGAAGAAATTTTTGTGGGGGGAGAAAAAGAAAAAAACAAACTTCCTT



gi|33680338|gb|CF308577.1|CF308577 ABF--02-H07.g1 ABF3-overexpressing transgenic rice plasmid cDNA library (ABF) Oryza sativa Ja

CCTGAGGGGAAATCGGCGGGA
||..||||||||.||| |||
GGGTTCCCCTTTGGCCCCCCA

EST sequence (targeted fragment marked with yellow):
TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAACCCAAAATCCCAAGGGTTTTTTTTTTTTTTAAAGGAAAATTTCACTTGGCCCCTTTGGAAAAACCCACGGGGTACCAAAAAAAAACTTTCGGCTTTCCCAAAAAAAATTTTTCCCCCCAATGCCCCCCCCTTTTTTTAAGGGGGGGGGGAACAAACAAAACAAAACCCCCACTTGGGGAAATTTTAAAAATTTTTTTTAAAAACCCCGGGGGGTTTTTCCTTTTAAAAACCCCCCGGTTTCCCCTTGGGGGTTTTCCCAACCCCCAATTTTTTTTTTTTTTTTTCAACCCTTTACCCTTTAATTTGGTTTGGAACACCCCCCGGTTTTTTTTGGACCGTTTATTTTTTTTTTTAACCCCACAATTAATTTTTTCCCCCCAATTTTGGGGGGGGCCCTTTGGAAATTTTTTTCTTTTTTTCC



gi|89195296|gb|CI051409.1|CI051409 CI051409 Oryza sativa (japonica cultivar-group) cold treated callus Oryza sativa Japonica Gro

CCTGAGGGGAAATCGGCGGGA
|||||||.||||.| ||.|.|
GGACTCCTCTTTGGACGTCTT

EST sequence (targeted fragment marked with yellow):
TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTACACGAATTTTTCTTTCTCAAAAAAATTAAACAGTAATGCTTACAACATCTGATGCTGGCCCGTTGCCTGGCCACCCCTATCCAGGAAAACTGAATATTCTCCTGAGTGGGTTACAGTAAGATCTATCGAGGTAAAAAAAATGAGCAGATATAGCAAGGGAGAGCGAGACGCACTGTAACAGAACAAATCTACCGGGGACTAGCTTCTGCAGGTTTCTCCTCAGGGCTATCCAGCACATCCCCAACTCCGACGGGTGGACCGATGCTACAGCGAGCAGTGTTGTGAACAGCAATTGCATCCTTCAGTTTCTGAAACTTCGCCAAGGAACATGAGAACGCCTCCAATTGNCCGTCAGCTCCACGGTAAAAATGGAAGTAAGGAAGGACTTTCACATTCAACCG