| mature miRNA: CCTGGGTCCACATGTCAGCCTCT species: Oryza sativa database: miRNEST The numbers on the right side of the alignments show a score calculated for them. When calculating the score, a mismatch is given a score of 1, bulge: 2, and wobble: 0.5. |
| Predicted miRNA targets | |||||||||
gi|44671806|gb|CR285240.1|CR285240 CR285240 Oryza sativa library (Han B) Oryza sativa cDNA clone p613d05p5, mRNA sequence CCTGGGTCCACATGTCAGCCTCT EST sequence (targeted fragment marked with yellow): TCATGTGTTGGTACCCGGGAATCGGACATTATGGCCGGGAGTGGTGATGTCAAGATGAAGAGCCGGCACGTCGCGGGCACGCTCACCAAGAAGAAGAAGAATGTGGTGGTGGACGTGTGCAGGGACGTGGCGGCGTGGCCGGGGAGGCACCTGCTGGAGGGCGGCGAGCACCGGCGGTACTTCGGGCTCCGCACCGCGGAGCACCGGGTGATCGAGTTCGAGTGCGGCAGCCAGAGAGAGCATGACATGTGGACCAAGGGCGTCGCCCGCCTCCTCGCCACCATCGATGGCCGTCGCAAGCGCTTCGCCTGACCGAACGCCGCCGCCGTCGCCGGCATTGCCTGCAAAAGCTGTTGTGATCATGTCACTCTTCACTGTTGCTGTCATTAGGAGCAGAAAACTGAACAAGATTCAGAGATGGTTTGTAGATGTGTGTGGTGTTGATTTCTCTTTTCTTTTTTGGTTTTATGTGTCATGTAAGAAGTGTTGTTTTGTATCTTCTCTTTTCAGTTGTCTCTGATTTAACTTGAGGGGGTTTGGGCAATGAAAATACAGACAGACAAGCATCATCTGCATTTGTAATAAAGAAAAAAAAGAAAAAAAAAAAAAAAAAAAACATGTGGGGCGCTCGGGACAGTGGATTCATAAACGAGCAAGTTATGATTGGGGGGAATAGAGCCAATGGGCAATGGCCATAGGAGTGGTTAAAATAGGGGGGGGTAAAAGCGGGTGGGAACTCGGGCCATAACGCGTGGAAACCTCTGCAGGGGAA | |||||||||