| mature miRNA: CGTCAGAGGTGACTGTCACC species: Oryza sativa database: miRNEST The numbers on the right side of the alignments show a score calculated for them. When calculating the score, a mismatch is given a score of 1, bulge: 2, and wobble: 0.5. |
| Predicted miRNA targets | |||||||||
gi|44671862|gb|CR285296.1|CR285296 CR285296 Oryza sativa library (Han B) Oryza sativa cDNA clone p620a02p5, mRNA sequence CGTCAGAGGTGACTGTCACC EST sequence (targeted fragment marked with yellow): NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGGGAACCTCGGCGACTCCGTCACGTCACGCGCGACAAGACAAGGTCACCGTCACCTCCGACGGGGCCTTCTCCAAGGGAGGAGGATATTGAATATTGACAGAAGCTGAAGAAGCACAAGTGCGGGACTGCTACGTGTTATGCGGCTANACAAGGGACCGCAATGTCTATAGCTCAGAANTNNACTTCAACATTGGCTGAGAACGAGGCGAGGAGGAAGACTAGAGTGTTCCAATATTTTTACCTCTTGGAGTTGTGAATTTGTATTCATCTTAGGTACCTCTTAGTTATTCAATCCATGTTATGTTATGTGTGGTCACTTGGATGCGTTAC | |||||||||
gi|88984165|gb|CI723720.1|CI723720 CI723720 Oryza sativa (japonica cultivar-group) 4 nuclei stage pistil Oryza sativa Japonica G CGTCAGAGGTGACTGTCACC EST sequence (targeted fragment marked with yellow): TTGGGACGCAGCAGCCGCAGCGGAAGAGGGAAGCGAAGCAAGCGAAGCTCGAGGGGAGATGGCGCGCGGCGTGGCGGCGGCGGNGGGGGGCAAGGGCGGCGCCGGGAAGAAGAAGGGCTCCGTCACCTTCGTCATCGACTGCGCCAAGCCCGTCGACGACAAGATCATGGAGATCGCGTCGCTCGAGAAGTTCCTGCAGGAGCGCATCAAGGTCGCCGGAGGCAAGGCCGGNNAACTCGGCGAGTCCGTCACCGTCTCCCGCGACAAGAACAAGGTCACCGTCACCTCCGACGGGCCCTTCTCCAAGAGGTACCTGAAGTACTTGACCAAGAAGTACCTGAAGAAGCACAATGTGCGTGACTGGCTACGGGTG | |||||||||
gi|29619111|gb|CB624123.1|CB624123 OSIIEa12G02.r OSIIEa Oryza sativa Indica Group cDNA clone OSIIEa12G02 3', mRNA sequence CGTCAGAGGTGACTGTCACC EST sequence (targeted fragment marked with yellow): AGCATATTCAAGCATCTCCAATTCCGACAATGCCTTGCGTACCTGACTCTTTATGTGTGGGCTGTGAGGGGATTTGTTGAGCTATGCTATGAATTGTTGGTTCCTTATTGCCTACTCACAAATCAATCCTTCTTGTCAAAGGCATCAGAAAATTGTTTCAACATCACATTAGCACTATTCTTGACCTATAATACATACAACTTCGTGGAGTACATGGAATGTGGGCTCTCTGTACGTGCCTGGTGGAACAACCACAGAATGCAACGGATCATTTCAGCCTCTGCATGGCTACTAGCATTTTTTACTGTGCTCCTCAAGACCATAGGCCTCTCCGAGACTGTGTTCGAGGTCACCCGTAAGGAGAAGAGCACATCGGATGGCAATGGCCAAAACGATGAGGTTGACCCGGAGAGATTCACCTTTGACGCATCACCAGTGTTCATCCCCGTTACGGCGCTGACAATGTTGAACATTGTTGCAATCACAATTGGTACATGGAGGGCAGTTTTTGGGACAACAGAAGACGTGCCTGGTGGTCCGGGTATAAGTGAATTCATGTCTTGTGGATGGCTGCTACTGTGCTTATTGCCATTTGTGAGAGGGCTAGTGGGCAAGGGAAGCTATGGTATCCCATGGAGTGTCAAGCTGAAGGCTAGTTTGCTGGTGGCCTTGTTCCTGTTCTGCTCCAATAGAAATTAGTTTCAGCATGTAAGCATAGTCAGCTTAACATGTTTCATGTATGTATTATTTGAGCAATATGTTTGTAATTCCATTTAGCAAATGACGACAAAAAAAG | |||||||||
gi|117225601|gb|CT859201.1|CT859201 CT859201 Oryza sativa (indica cultivar-group) cv. Guang Lu Ai 4 Oryza sativa Indica Group cD CGTCAGAGGTGACTGTCACC EST sequence (targeted fragment marked with yellow): TCCTTCCGGCCAGCCGAGACGACGGTGAGGACGCAGCAGCCGCAGCGGAAGAGGGAAGCGAAGCAAGCGAAGCTCGAGGGGAGATGGCGCGCGGCGTGGCGGCGGCGGCGGGGGGCAAGGGCGGCGCCGGGAAGAAGAAGGGCTCCGTCACCTTCGTCATCGACTGCGCCAAGCCCGTCGACGACAAGATCATGGAGATCGCGTCGCTCGAGAAGTTCCTGCAGGAGCGCATCAAGGTCGCCGGAGGCAAGGCCGGCAACCTCGGCGAGTCCGTCACCGTCTCCCGCTATAAGACCAAGGTCACCGTCACCTCCGACGGGCCCTTCTCCAAGAGGTACCTGAAGTACTTGACCAAGAAGTACCTGAAGAAGCACAATGTGCGTGACTGGCTACGGGTGATTGCATCCAACAAGGACCGCAACGTGTACGAGCTCCGGTACTTCAACATCGCCGAGAACGAGGGCGAGGAGGAGGATTAGATGCACTGCCTTTTTCTATGTCTTGTGAACTTTTGAACTTGCTGGAACACTATGCTGTAGTCACTGAAGAGAAGAATTTTGATGTTTCATTTATCAATGTTTCCCTGTGTGCTTAAAACCTATGCTTAGTAAGCAAGTTGAAGAATTATTGGTTCTCACAAA | |||||||||
gi|86252550|gb|CI003886.1|CI003886 CI003886 Oryza sativa (japonica cultivar-group) etiolated shoot Oryza sativa Japonica Group c CGTCAGAGGTGACTGTCACC EST sequence (targeted fragment marked with yellow): TTTTTTTTTTTTTTTTTTTACCATTTTGAATCAACCTATGGAAACATTTCAAGCAGAAGTTGTCACTACAGCAGAACAAGCTAGCAGTGACGGGCTCAAACCCTCTTCTGTGACGGATAGACCCCCTCGTCACAGATCAATGGTCACTGATGACTTAACTCACCTTTGACGGGTGTAGCTCCGTCAGAGGTGACAGACACCTTTGACGGGTTGTATCATGTGACCCGTCACAGATGAGAAAAATCACCCAAAAAAAAAAGGAAAAAAGAGCCACAACCACAGCTCAACATCCGTCACTGATGTAGATTTTGATAAAAAAAAAACAAAAAAAAAGTGCTTCTGGGTAGTTGCCATCGCATTCATCACACACAACATTTCATCACACAGAAAAGTCTTCACGAACATTTCATCACACATAAAACAGCCATGGCAAGCAAGCAATTCGTCAATCACCTGACGAGCAACAAAAACGAAGGGAATAAATGGTTGTGGGTTTTGCCGGGCAGGGCTTCTTCATACCACGGTGGGCTTGAACTC | |||||||||
gi|55439582|gb|CV733101.1|CV733101 FLO--07-N22.g1 Rice flower lambda phage cDNA library (FLO) Oryza sativa Japonica Group cDNA c CGTCAGAGGTGACTGTCACC EST sequence (targeted fragment marked with yellow): TTTTTTTTTTTTTTGTATCAGTGAATGCAGGTTGCAGGTATATCAGTTTGTTAATAACAAGAAGGGGTTTCTATTTCTGATATGACACACATACATTCTGAAGTGGAGTATAATACAGTAAAACAAACCAGTGATTGCTTTTCATCATTACTCTTTTATGACCTCACTTTGGCGAGCCTTTCCCTTATCTGTTCAAGCTCGTCATCGTCATCGTCATCGACGGCTTCCGCAATAGCAGTTCTCTCTGCAGGTTCACTTGTTGAAGGTTGCTTCATCTTCTCCTTTTCCTTCCTGACAGCGTCTGGAAGCTCAGAGGCAGTCTCCCCAGCAATTGCAGAGAGGACCTTGTCAACCTCCTCTTCAATCTCCTCCTCAATGTCCTCATTGTCCAGCGCTGAATCCACAGCATCGTTCACCATTTCTTCCATTACACCAGCCTTGGTCATCTCTTTGCTGAATTCCTGCATGGTGGCAGCCACCTCTGGTGCTTT | |||||||||
gi|88370042|gb|CI680727.1|CI680727 CI680727 Oryza sativa (japonica cultivar-group) 3rd week immature panicle Oryza sativa Japoni CGTCAGAGGTGACTGTCACC EST sequence (targeted fragment marked with yellow): TATCGCCTCCACCGCCTCAACCCGGACGCAGCAGCCGCAGCGGAAGAGGGAAGCGAAGCAAGCGAAGCTCGAGGGGAGATGGCGCGCGGCGTGGCGGCGGCGGCGGGGGGCAAGGGCGGCGCCGGGAAGAAGAAGGGCTCCGTCACCTTCGTCATCGACTGCGCCAAGCCCGTCGACGACAAGATCATGGAGATCGCGTCGCTCGAGAAGTTCCTGCAGGAGCGCATCAAGGTCGCCGGAGGCAAGGCCGGCAACCTCGGCGAGTCCGTCACCGTCTCCCGCGACAAGACCAAGGTCACCGTCACCTCTGACGGGCCCTTCTCCAAGAGGTACCTGAAGTACTTGACCAAGAAGTACCTGAAGAAGCACAATGTGCGTGACTGGCTACGGGTGATTGCATCCAACAAGGAC | |||||||||
gi|89171410|gb|CI720469.1|CI720469 CI720469 Oryza sativa (japonica cultivar-group) 4 nuclei stage pistil Oryza sativa Japonica G CGTCAGAGGTGACTGTCACC EST sequence (targeted fragment marked with yellow): TTGGGGCGCAGCAGCCGCAGCGGAAGAGGGAAGCGAAGCAAGCGAAGCTCGAGGGGAGATGGCGCGCGGCGTGGCGGCGGCGGCGGGGGGCAAGGGCGGCGCCGGGAAGAAGAAGGGCTCCGTCACCTTCGTCATCGACTGCGCCAAGCCCGTCGACGACAAGATCATGGAGATCGCGTCGCTCGAGAAGTTCCTGCAGGAGCGCATCAAGGTCGCCGGAGGCAAGGCCGGCAACCTCGGCGAGTCCGTCACCGTCTCCCGCGACAAGACCAAGGTCACCGTCACCTCCGACGGGCCCTTCTCCAAGAGGTACCCGAAGTACTTGAC | |||||||||
gi|89169523|gb|CI109882.1|CI109882 CI109882 Oryza sativa (japonica cultivar-group) Panicles less than 5cm stage Oryza sativa Jap CGTCAGAGGTGACTGTCACC EST sequence (targeted fragment marked with yellow): TTTTGGGTGATTTTTCTCATCTGTGACGGTTCACATGATACAACCCGTCAAAGGTGTCTGTCACCTCTGACGGAGCTACACCCGTCAAAGGTGAGTTAAGTCATCAGTGACCATTGATCTGTGACGAGGGGGTCTATCCGTCACAGAAGAGGGTTTGAGCCCGTCACTGCTAGCTTGTTCTGCTGTAGTGACAACTTCTGCTTGAAATGTTTCCATAGGTTGATTCAAAATGGTAAAAGAACTTTCCATCAATTGCTGAGCACCTACTGCACTAAAAGTGGCACAAGAACTAAGAATTGGCTGAGCACTAGTCCAAGCTATCCGTATGGCCAAGGCTACAAACAGTGCTAGCTCAGCTGGTGAAACATCAGTTTATCATTAGAAACAAAACAAAGATTAGCCTAATAAAAACATTCT | |||||||||
gi|88675412|gb|CI729525.1|CI729525 CI729525 Oryza sativa (japonica cultivar-group) 4 nuclei stage pistil Oryza sativa Japonica G CGTCAGAGGTGACTGTCACC EST sequence (targeted fragment marked with yellow): TTGGGGCGCAGCAGCCGCAGCGGAAGAGGGAAGCGAAGCAAGCGAAGCTCGAGGGGAGATGGCGCGCGGCGTGGCGGCGGCGGCGGGGGGCAAGGGCGGCGCCGGGAAGAAGAAGGGCTCCGTCACCTTCGTCATCGACTGCGCCAAGCCCGTCGACGACAAGATCATGGAGATCGCGTCGCTCGACAAGTTCCTGCAGGAGCGCATCAAGGTCGCCGGAGGCAAGGCCGGCAACCTCGGCGAGTCCGTCACCGTCTCCCGCGACAAGACCAAGGTCACCGTCACCTCCGACGGGCCCTTCTCCAAGAGGTACCTGAAGTANTTGACCAAGAAGTACCTGAAGAAGCACAATGTG | |||||||||
gi|29660353|gb|CB656628.1|CB656628 OSJNEc11D08.r OSJNEc Oryza sativa Japonica Group cDNA clone OSJNEc11D08 3', mRNA sequence CGTCAGAGGTGACTGTCACC EST sequence (targeted fragment marked with yellow): GTCAAGGGCCTCTCCGTGGAGGACATGGTGGTGCTCTCGGGCGCCCACACCGTCGGCCGCTCCCACTGCTCCTCCTTCGTCCCCGACCGCCTCAACGCCTCCGTCTTCTCCGACATCGACGGCGGCTTCGCCTGGTTCCTCAGGTCGCAGTGCCCGCTCGACGCGACGCCCGGCGGCAACGATCCCACGGTGATGCTGGACTTCGTGACGCCCAACACGCTGGACAACCAGTACTACAAGAACGTGCTCGACCACAAGGTGCTCTTCACCTCTGACGCGGCGCTCCTGACGTCGCCGGAGACGGCGAAGATGGTGGTGGACAACGCCGTCATCCCCGGGTGGTGGGAGGACAGGTTCAAGGCGGCCATGGTGAAGTTGGCGAGCATCCAGGTGAAGATCGGGTACCAGGGGCAGATCAGGAAGAACTGCAGGGTCATCAACTACTGATTAATCTACAAGTTTAGCTGCGTGATTCAATTACCTGGTGAAGTACGTGCTCAACGATGACGACGTACACGGTTTGATAGTTTCACACCCTCCTTGATCAAGTCGCAAGCGTACGTGTTGATGATGTTATGATTGGATGTGACTTTTGCTTCACATTTATGTTCTCCCTCTTTTGTTACCATTCCTTAATTCCTCATTTGTGAACCCCAAGGTTTACATGCTATGGATTTCTTTGTTTTGACCTAATTGTGTAATAAGGTCATATGTACTTGGAATAATTGTAAGTTAAGTTTTTTGCAACAAGTGCCCGCTATATATTGATGTTTATCTGAAATTG | |||||||||
gi|117243594|gb|CT843135.1|CT843135 CT843135 Oryza sativa (indica cultivar-group) cv. Guang Lu Ai 4 Oryza sativa Indica Group cD CGTCAGAGGTGACTGTCACC EST sequence (targeted fragment marked with yellow): GTGAAACGGCAGGAGGAGGGAGACACCTCGAGGAAACCACAGCACCCAAAGAACAAGAAAGGCGATACCCCTTCTCCCACCACCACCGTTTCCGTCCATCTCCATCCTCACCGCCGGCGACGCTCACCTCCGACGACCGATCGGCGACCTGCTTCAGCCATGGCAATGGCTTACAAGATGGTAATCCAGTCTGTCACACACCTTGGTTATTGAGTCCATGGGTCGTCGTCGTTGCGGCGTTCTGATGGAGTATGTGGGTTGGGTGCGTCTGTGCAGGCGACGGAGGGGATGAACGTGAAGGAGGAGTGCCAGAGGTGGTTCATGGAGATGAAGTGGAAGAAGGTGCACCGGTTCGTGGTGTACAAGATCGACGAGCGGTCGCGCGCCGTGCTGGTGGACAAGGTGGGCGGCCCCGGCGAAGGGTACGAGGAGCTCGTCGCCGCGCTGCCCACCGACGACTGCCGCTACGCCGTCTTCGACTTCGACTTCGTCACCGTCGACAACTGCCAGAAGAGCAAGATCTTCTTCATCGCCTGGTCACCGACCGCATCTAGGATAAGAGCCAAGATTCTGTACGCGACGTCGAAGCAAGGGCTGAGGCGGGTGCTTGACGGGGTCCACTACGAGGTGCAAGCCACGGACTCCTCCGAGATGGGCTACGACGTCATCCGAGGCCGCGCTCAGTGAGCTGAGCTCCTCCGGCGCCGGCGCGCCGCCGCGACGCGATGAGTCGCGGGCGGGGTTGCGGCGCTGTACTTAGCACGTACTCACCCCCAGTGTGTGTGGTATAATCGGACGGATGCTAATTGGCTCTCTCGTTCTCGTAGTAGGGGCGGCTGATGATGCGATCTGACGAGGGTTTGTGAATTTGGTTTAGAGTTTGGCGTGGCGTGGCGTGCTGTTTCGTTTGGAGAGTGGAAGGGGTGTGGTTAAACGTGGCCTTGTTCCTAAAGGAATGGCAACCGAATAATTGGAAACGTCCCTGGTCGGTGAACTAAAAATTTCCCCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACAACCCCAAAAAAAAAAAAAAAAAAAAGG | |||||||||
gi|88357546|gb|CI623600.1|CI623600 CI623600 Oryza sativa (japonica cultivar-group) callus Oryza sativa Japonica Group cDNA clone CGTCAGAGGTGACTGTCACC EST sequence (targeted fragment marked with yellow): GTAGGAAACCACAGGACCCAAAGAACAAGAATGGCGATACCCCTTCTCCCACCACCACCGTTTCCGTCCATCTCCATCCTCACCGGCGGTGACGCTCACCTCCGACGACCGATCGGCGATCTGCTTCAGCCATGGCAATGGCTTACAAGATGGGGACGGAGGGGATGACCGTGAAGGAGGAGTGCAAGAGGTGGTTCATGGAGATGAAGTGGAAGAAGGTGCACCGGTTCGTGGTGTACAAGATCGACGAGCGGTCGCGCGCCGTGCTGGTGGACAAGGTGGGCGGCCCCGGCGAAGGGTACGAGGAGCTCGTCGCCGCGCTGCCCACCGACGACTGGCGCTACGCCGTCTTCGACTTTGACTTCGTAACCGTCGAGAAATGCCAGTAAGAG | |||||||||
gi|88574292|gb|CI666061.1|CI666061 CI666061 Oryza sativa (japonica cultivar-group) library (Kikuchi S) Oryza sativa Japonica Gro CGTCAGAGGTGACTGTCACC EST sequence (targeted fragment marked with yellow): GGGTAAACCCTAGCCGCCTCTGCGCCGCCACACACCCCCAACCAAGCTTCCACCAGCGAGAAGCGGGGGCGAGAGGGCGAGATGGCGCGCGGCGTGGCGGTGGCGGCGAAGGGCGGCGCGGGCGGCAAGAAGAAGGGCTCCGTCTCGTCCGTGATCGACCTGCTCCAACCCCGTGGAGGACAAGATCATGGAGATCGCGTCGCTGGCGAAGTTCCTGCAGGAGCGCATCAAGGTNGCCGGCGGNAAGGGCGGGAACCTCGGCGANTCCGTCACCGTNACGCGCGACAAGACCAAGGTCACCGTCACCTCCGACGGGGCCTTCTCCACCAGGTCTCTGAAGTACTCTGACCAAGAAGTACTTGAACAAGCACCATGTGCGGGACTGGCTACCTGTCATTGCGGCTAACACGGACCGGAATGTCTATGAGCTCAGATACTTCCACATTGGCGACAACGACGGCGACGAGGAAGAGTACACCGTATTCCACCTC | |||||||||
gi|58594946|gb|CF993254.1|CF993254 18457rsicee_9737.y1 Oryza sativa cv. LYP9 tillering whole plant cDNA library Oryza sativa Ind CGTCAGAGGTGACTGTCACC EST sequence (targeted fragment marked with yellow): CTGCAGGAATTCGGCACGAGGCCATCCTCACCGCCGGCGACGCTCACCTCCGACGACCGATCGGCGACCTGCTTCAGCCATGGCGATGGCTTACAAGATGGCGACGGAGGGGATGAACGTGAAGGAGGAGTGCCAGAGGTGGTTCATGGAGATGAAGTGGAAGAAGGTGCACCGGTTCGTGGTGTACAAGATCGACGAGCGGTCGCGCGCCGTGCTGGTGGACAAGGTGGGCGGCGGGGCGAAGGGTACGAGGAGCTCGTCGCCGCGCTGCCCACCGACGACTGCCGCTACGCCGTCTTCGACTTCGACTTCGTCACCGTCGACAACTGCCAGAAGAGCAAGATCTTCTTCATCGCCTGGTCACCGACCGCATCGAGGATAAGAGCCAAGATTCTGTACGCGACGTCGAAGCAAGGGCTGAGGCGGGTGCTTGACGGGGTCCACTACGAGGTGCAAGCCACGGACTCCTCCGAGATGGGCTACGACGTCATCCGAGGCCGCGCTCAGTGAGCTGAGCTCCTCCGGCGCCGGCGCGCC | |||||||||
gi|88719579|gb|CI743089.1|CI743089 CI743089 Oryza sativa (japonica cultivar-group) library (Kikuchi S) Oryza sativa Japonica Gro CGTCAGAGGTGACTGTCACC EST sequence (targeted fragment marked with yellow): GGGGCCGCAGCAGCCGCAGCGGAAGAGGGAAGCGAAGCAAGCGAAGCTCGAGGGGAGATGGCGCGCGGCGTGGCGGCGGCGGCGGGGGGCAAGGGCGGCGCCGGGAAGAAGAAGGGCTCCGTCACCTTCGTCATCGACTGCGCCAAGCCCGTCGACGACAAGATCATGGACATCGCGTCGCTCGAGAAGTTCCTGCAGGAGCGCATCAAGGTCGCCGGAGGCAAGGCCGGCAACCTCGGCGAGTCCGTCACCGTCTCCCCGCGACAAGACCAAGGTCACCGTCACCTCCGACGGGCCCTTCTCCAACAGGTACCTGAAGTACTTGACCAAGAAGTACCTGAAGAAGCACAATGTGCGTGANT | |||||||||
gi|58587597|gb|CF985905.1|CF985905 20138rsicee_1472.y1 Oryza sativa cv. LYP9 tillering whole plant cDNA library Oryza sativa Ind CGTCAGAGGTGACTGTCACC EST sequence (targeted fragment marked with yellow): GCACGAGGGCACCATCGAAGACTGCGAGCAAGTGATCAAGAACCTCGACGGCAGCCTGTACAGTGGGCGCACGATGAGGGTGAACTTCGCGGACAAGCCCAAGCCGAAGCTGCCGCTTTACCCGCGAGACTGAGCACAAGCTGTTCGTCGGCAACCTGTCGTGGACGGTCACCTCGGACGATGCTGACGGAGATGTTCCAGAAGTGCGGCAACGTGGTCGGCGCCCGGGCTGCTCTACGACGGCGAGACCGGCCGGTCCCGTGGCTACGGCTTCGTCTGCTACTCCACCAAGGAGGAGATGGATGAAGCTCTTTCCTCGCTCAATGGAACGGAACTAGAAGGCAGGGAGATCCGGGTCAACCTCGCCCTTGGAAAGAAATAATCACAGAGTAATAGATTTACTTCACATGCACAGGAGAAACTTGCAATAC | |||||||||
gi|95100793|gb|CI692507.1|CI692507 CI692507 Oryza sativa (japonica cultivar-group) 2 weeks after flowering ear Oryza sativa Japo CGTCAGAGGTGACTGTCACC EST sequence (targeted fragment marked with yellow): GATCGCCTCCACCGCCTCAACCCGGACGCAGCAGCCGCAGCGGAAGAGGGAAGCGAAGCAAGCGAAGCTCGAGGGGAGATGGCGCGCGGCGTGGCGGCGGCGGCGGGGGGCAAGGGCGGCGCCGGGAAGAAGAAGGGCTCCGTCACCTTCGTCATCGACTGCGCCAAGCCCGTCGACGACAAGATCATGGAGATCGCGTCGCTCGAGAAGTTCCTGCAGGAGCGCATCAAGGTCGCCGGAGGCAAGGCCGGCAACCTCGGCGAGTCCGTCACCGTCTCCCGCGACAAGACCAAGGTCACCGTCACCTCCGACGGGCCCTTCTCCAAGAGGTACCTGAAGTACTTGACCAAG | |||||||||
gi|117240481|gb|CT842832.1|CT842832 CT842832 Oryza sativa (indica cultivar-group) cv. Guang Lu Ai 4 Oryza sativa Indica Group cD CGTCAGAGGTGACTGTCACC EST sequence (targeted fragment marked with yellow): CCGGTAAACCCTAGCCGCCTCTGCGCCGCCACACACCCCCAACCAAGCTTCCACCAGCGCGAAGCGGCGGCGAGAGGGCGAGATGGCGCGCGGCGTGGCGGTGGCGGCGAAGGGCGGCGCGGGCGGCAAGAAGAAGGGCTCCGTCTCGTTCGTGATCGACTGCTCCAAGCCCGTGGAGGACAAGATCATGGAGATCGCGTCGCTGGAGAAGTTCCTGCAGGAGCGCATCAAGGTCGCCGGCGGCAAGGCCGGGAACCTCGGCGACTCCGTCACCGTCACGCGCGACAAGACCAAGGTCACCGTCACCTCCGACGGGGCCTTCTCCAAGAGGTATCTGAAGTACTTGACCAAGAAGTACTTGAAGAAGCACAATGTGCGGGACTGGCTACGTGTTATTGCGGCTAACAAGGACCGCAATGTCTATGAGCTCAGATACTTCAACATTGCTGAGAACGAGGGCGAGGAGGAAGACTAGAGTGTATTCCACATATATCTTAGTTTTGGAGTTGTTGAATTTTGATACTTCATCTTAGTACCTCTAGTTATTCAATCCATGTTATGTTATGCTGTGGTCAACTTGGATGGTTAATTTGAAGAATCCTTATATTTGGTCGCCTCAAAAAAACAATACCAAACCGAACCGAAGGACCCCACCCAAAATCACACGCGCCAACCAGATCAAACCCACCTCGCAGGAGAAGAGAAGCGATCTACCTCTCCTCGAGGTGGTGGTGAGGATTTGGAGTTGAATTGTGGGGAGGGGGACCTCGCGGGTGTTGCCGGTTTGGAGCCCAAGATAGGGTTATGAGCTGCTTCGCGGACCGCCGCTGCTACGCCGCCAGCCGCCGCCAGGACGGCCTCCTCGTGTTCATGTTCTTCATCTCGATTCCCATACGTACTAGTAGCAGTAGTAGTAATAATTGTAATTCCAGTAGTAGTATTAGTAGTAATCTCCTGTAAGCGGAGTTCCTCCTCGCGGCTGCGTGTACGGGGACGGGAGGACCTTCTTCCTCTTCGTGTTCATCTTCTTCTTCTTCTTCCCCTCTTCCTTCGGCTTCGGCGCTGGCGGCTATGGATCCCAATAGCCTCAAAACTGGAGGCCTCTTGCTTCCGACCATTGAGAGGCAATGTGCTTCGCCTCCATCCGTCATCGTGATCGGTGGGGGAATTTCAGGGGTTGCAGCAGCCCGTGCTCTCTCCAATGCTTCGTTTGAGGTGACTGTTTTGGAGTCCAGAGATCGCGTAGGCGGTCGTGTCCATACCGATTACTCTTTCGGATGCCCAATTGATATGGGAGCCTCATGGCTCCACGGCGTTTGTAATGAGAACTCCTTGGCACCATTGATTGGCTATCTTGGGCTGAAATTATATCGCACTAGTGGCGACAACTCTGTTCTGTATGATCATGATTTAGAAAGTTATGCACTCTTTGATAAGGCTGGCCATCAGGTCTCAAAGGAGACAGTTGCTAAAGTTGAAGAAACATTTGAAAGAATTCTTGATGAGACAGTTAAAGTGCGTGATGAGCAGGAACATGACATGCCCCTTCTACAGGCGATTTCACTTGTTCTTGAGAGGCACCCCCATCTGAAGTTACAAGGGATAGATGATCAAGTCTTGCAATGGTGTGTCTGTCGGCTTGAGGCATGGTTTGCTGCAGATGCTGATGAAATATCTCTGAAAAACTGGGATCAGGAGCATGTTCTTACCGGTGGCCATGGTCTGATGGTGAACGGATACTATCCTATAATTCAAGCTCTTGCACAAGGTCTAGATATCCGGCTTAATCAAAGGGTAACCAAAATTGCCCGCCAATTTCAATGGAGTGACAGTTACCACTGA | |||||||||
gi|88979017|gb|CI025535.1|CI025535 CI025535 Oryza sativa (japonica cultivar-group) etiolated shoot Oryza sativa Japonica Group c CGTCAGAGGTGACTGTCACC EST sequence (targeted fragment marked with yellow): TTTTGTTATAACAAGAAGGGGTTTCTATTTCTGATATGACACACATACATTCTGAAGTGGAGTATAATACAGTAAAACAAACCAGTGATTGCTTTTCATCATTACTCTTTTATGACCTCACTTTGGCGAGCCTTTCCCTTATCTGTTCAAGCTCGTCATCGTCATCGTCATCGACGGCTTCCGCAATAGCAGTTCTCTCTGCAGGTTCACTTGTTGAAGGTTGCTTCATCTTCTCCTTTTCCTTCCTGACAGCGTCTGGAAGCTCAGAGGCAGTCTCCCCAGCAATTGCAGAGAGGACCTTGTCAACCTCCTCTTCAATCTCCTCCTCAATGTCCTCATTGTCCAGCGCTGAATCCACAGCATCGTTCACCATTTCTTCCATTACACCAGCCTTGGTCATCTCTTTGCTGAATTCCTGCATGGTGGCAGCCACCTCTGGTGCTTTCATAAGGTTATTGACAAGTTTCATCACCTCAGTACTCTTGGATAAATGGCCAACAGTCCTGG | |||||||||
gi|88221525|gb|CI221481.1|CI221481 CI221481 Oryza sativa (japonica cultivar-group) mixed callus (Normalized Library) and mixed s CGTCAGAGGTGACTGTCACC EST sequence (targeted fragment marked with yellow): TTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGGCTAGCCAATATTTAGCATTTATTTTTTTTCTGGAATTAACTCATCAGTGACGGTTCGGAAGAAACATCCGTCACAGGTAACCTCACCTGTGACGGACTCGCAAACGTCGGACCGTCACAGGTGACCCACCTGTGACGGGCTTTTACTTTCGGGCCCGTCACAGGTGGGTCACCCTGTGACGGCTACTATATACCGGAGATCATCACCTCTGACGGGCCTTTATATAGGGGCTCGTCAGAGATGAGACACCTGTGACGGGTCCTAACAAGCCCTAGTCTAGCTTAGACCAACACCTCTGACGGCCTTCTATTACCTTGCCCGTCAGAGGTGGATGTCACCACTGAAGGCCGGCCACCCGTCAAAGGAGACTGGACTTA | |||||||||
gi|117221400|gb|CT858978.1|CT858978 CT858978 Oryza sativa (indica cultivar-group) cv. Guang Lu Ai 4 Oryza sativa Indica Group cD CGTCAGAGGTGACTGTCACC EST sequence (targeted fragment marked with yellow): ATATCTCATCTCCCCCCTCACCTTCGCGACTCTCACCTCACCTGCTGACACTCCGAGATCGATCCGTCATCGATCGAATCGGTCCGATGGCGGCGGCGAAGGATGAGGAGGCGATGATGAGGCTGTTGCTCTGCAGCCGCGGGGGGCGCCTCGTTCCGTGCGGTCCCGGCGGCGGCCTCCGGTACGACGGCGGCGAGACGCGCGCCCTCGTCGTGCCGCGGGGTGTGTCCTTCCGCGAGCTGACGGCGCCGCTGGCGGAGAGAGCCGGAGCGACGTCGTCACGGCGGTCACGTACCGCGCTCGCGACGAGCGCAGCGACGAGCACTCCTGGTGTCTGTCACCTCCGACGACGAGCTCGCCTACTGCGTGACAAGTACGATCGCCTCAAGTCGAAGCTGCCGTCTGCGAGCTTTCGGAGTATTCCTCTCCTCCGGCAGTAACGCCGCCTTCCCCTTTGGATTGGGGGGGGTTTTGCGAAAACAGGACAGGTTTTCCCCCAACGGGTGAACGGGAAAACTTTTTTTTCTTAAAAAGAATGGGAATAAGAAATTCCCGGGCCCCAATTTCAAAGGGTTGGTTGGGGGAAAGAATTTGCCCCCCCCAATTTTTTTTTTTTAGGAGAATATTTAACTTGTTTTTTTTTTTGGGGTTC | |||||||||
gi|42414314|gb|CK664954.1|CK664954 OF19B07-T3.ab1 OF Oryza sativa Indica Group cDNA clone OF19B07-T3.ab1 similar to NP_565390.1| CGTCAGAGGTGACTGTCACC EST sequence (targeted fragment marked with yellow): GGGAAAGGCGATACCCCTTCTCCCATCAGCACCGGTTCCGCCCATCTGCATGCTGACCGACGGCGACGCTCACCTCCGACGACGGATCGGCGACCTGGTTCAGCCATGGCAATGGCTTACAAGATGGAGACGGAGGGGATGAACGTGTATGATGAGTGCCAGAGGCGGCTCCTCGAGATGAAGTGTGAGAACGTGCACCGGCTCGAAGGGTACAAGATCTACTAGCGGCAACGCGCTGTGCTGCTAAGACAAGGTGCGAGGGCCCGGCGAAGGGTTCAAGGAGCTTGAACCCGTGCTGTCCACCGACGACTGCCCGTACACCGTATTGGACTTCAACTACGTTATCGAAGACAACTGGCAGAATAGCAAGATCTTCTTCATCGCCTGGGTACCGACCGCATCGAGGATACCAGCCCAGATTGTGTTCCCACACTTCGAACCATGGGCTGTAGTCGGTGTTTGACGGGGTTCACTTCAAGTGAAAGCCCCGACTTTTTCATTTGGGCTACAACGCATCCGAGGCCGGGCTTAGGGGGTGATTTTCTCTCGGGCCTGCGCGCCGCCGTCACCGATGATTCCCGGGCGGGCTCTGTGCCTTTTCCTGGGCCCTAACTTACCCCAGTGCGCGGGGCTTACACGGCCGCGTGTCACTGGCCCTCTCCTC | |||||||||
gi|88954479|gb|CI718458.1|CI718458 CI718458 Oryza sativa (japonica cultivar-group) 4 nuclei stage pistil Oryza sativa Japonica G CGTCAGAGGTGACTGTCACC EST sequence (targeted fragment marked with yellow): TTGGGGCGCAGCAGCCGCAGCGGAAGAGGGAAGCGAACCAAGCGAAGCTCGAGGGGAGATGGCGCGCGGCGTGGCGGCGGCGGCGGGGGGCAAGGGCGGCGCCGGGAAGAAGAAGGGCTCCGTCACCTTCGTCATCGACTGCGCCAAGCCCGTCGACGACAAGATCATGGAGATCGCGTCGCTCGAGAAGTTCCTGCAGGAGCGCATCAAGGTCGCCGGAGGCAAGGCCGGCAACCTCGGCGAGTCCGTCACCGTCCTCCGCGACAAGACCAAGGTCACCGTCACCTCCGACGGGCCCTTCTCCAAGAGGTACCTGAAGTACTTGACCAAGAAGTACCTGAAGAAGCACAATGTGCGTGACTGGCTACGGGTGATTG | |||||||||
gi|88340693|gb|CI647571.1|CI647571 CI647571 Oryza sativa (japonica cultivar-group) germinating seeds Oryza sativa Japonica Group CGTCAGAGGTGACTGTCACC EST sequence (targeted fragment marked with yellow): GGGGTAAACCCTAGCCGCCTCTGCGCCGCCACACACCCCCAACCAAGCTTCCACCAGCGCGAAGCGGCGGCGAGAGGGCGAGATGGCGCGCGGCGTGGCGGTGGCGGCGAAGGGCGGNGCGGGCGGCAAGAAAAAGGGCTCCGTCTCGTTCGTGATCGACTGCTCCAAGCCCGTGGAGGACAAGATCATGGAGATCGCGTCGCTGGAGAAGTTCCTGCCGGAGCGCATCAAGGTCGCCGGCGGCAAGGCCGGGAACCTCGGCGACTCCGTCACCGTCACGCGCGACAAGACCAAGGTCACCGTCACCTCCGACGGGGCCTTCTCCAACAGGTATCTGAAGTACTTGACCAAGAAGTACTTGAAGAAGCACAATGTGCGGGACTGG | |||||||||