| mature miRNA: CTCTTGGTCGAGACGCCAGT species: Oryza sativa database: miRNEST The numbers on the right side of the alignments show a score calculated for them. When calculating the score, a mismatch is given a score of 1, bulge: 2, and wobble: 0.5. |
| Predicted miRNA targets | |||||||||
gi|44673284|gb|CR286718.1|CR286718 CR286718 Oryza sativa library (Han B) Oryza sativa cDNA clone p742d09p5, mRNA sequence CTCTTGGTCGAGACGCCAGT EST sequence (targeted fragment marked with yellow): CCTGCTGTTGGTTACCGGGCAATTCGGCCATTATGGCCGGGTCGTGCTCCGGCGCCGATACTTTGAAGAAATGGTTGCACAGAAGAGTGGACAGAAGTATCGGAACCGCTTTGATCTTGGCACACGAAAGAATATTCACATGATCATGGGCCCAAACATCCTGTGCTGGCTTTGCCCTACTGCAACGGGGCATCTCAAGGATGGCACTGAGTACCAGATCACAAACAACTGATCGGATCAACAAGGAAGCAATTGCTGCACACGTACATACTTCATACATACATTGTAGATTTGCGAGTTTATTTGGCGACCAAAGTTCTTGGCCGTTCCATTTGCTTGTAGCAGTAGAGAGCTCCACATATGTCACCAGAATCTATGTATGACAGCATGTGAAATGTTCCATATCCCTCCTAATCTCCATGTATTCTCTTGCTTCAATTTATTTGTGTGCAGAGCTGTAGATAGATCAAGTGATTAGAGTACTGAGCATAGTGTACTGACATATTGAACGGCAAAACTATCAAATTGACCAGAAATCTCATGCAAAAAAAAAAAAAAAAAAAAAAAACAAACTGTACGGCGCCTCGACCAGGAGACACTAAATCGAACAAGCTAAGCATGCGCCGAACTCAAGCCATAGGGCAATACGCCTAGAGAGCGTTACACTCAACGGCGCGGAATCAACGCCCGACGGAAACCCTGGTACCACATAGCGCAGAACATCCCATAGCAAGGAGAATAGAAAGCGCCGAGCTCCAAGTGCACTCAGGAGAAGAGCATTGAACCGAATGAACATAACAGAGAACAAAAACAGGAGAACA | |||||||||
gi|58605062|gb|CK033095.1|CK033095 38374rsiceg_3470.y1 Oryza sativa cv. 93-11 tillering whole plant cDNA library Oryza sativa cD CTCTTGGTCGAGACGCCAGT EST sequence (targeted fragment marked with yellow): CGAGGCTTGGCCAAATCCAATCCGGGAGGTGCGGGGGCCGTTCCGATCGAGTCGGTCCTGCCGTGTCGACCAAGAGGTTTGCACGTTCTACCAGAAAGGTTCATGCTCGTATGGTAGCCGTTGCCGATATGACCATGTCAAAGTTTCTCGTAACCCCACAGTGGCTCCACCACCAAGCTCAAGTACTACAACACGTGCATC | |||||||||
gi|87038712|gb|CI192751.1|CI192751 CI192751 Oryza sativa (japonica cultivar-group) root of seedlings Oryza sativa Japonica Group CTCTTGGTCGAGACGCCAGT EST sequence (targeted fragment marked with yellow): TTTACTGAAGCATAAATCTTTTTCCTGGAAATACTACAGTTGTTCATGTAGCCAACCAGCAAGCAACACAACACAAACACACACGCCACAAAACCTTCATCTGAGCAAAAACCAAAAACCCTCATCATTTCCCAACCAGCGAGTACTTGTGCCGCCGGTTGTTCCGGAGCGCGCAGCAGCCGAGGGAGTAGACGACGAGGAGGAGGGCGACGAAGGCGGCGTTGACGAAGGCGATCTTCTTCCAGCTGCTCCTCAGGTTGCCAAGAACACCGGCCTTGGCAGGACTGGCAGCCGTAGCAGAGCTCAGACTGGTCATTCGACCAAGAGTTGCAGTCAGGGTCTGAGTAGTTGCTGGGTGTAGGAGGCTTGATCCAGTATGTCTCGTTCTGGTATGTGAAGTTGCATGCTGTTGGTGGCTTGCAGCATCCAGACTGCAGCGGCGAGAGGTTGGAGTTGACGAATTCGTCGAGCGTCTGGTTGCTCTTCAAGCTCCGGCACACGCCGGTGTCGACGAGGCAGCTCCTGATCCTCGCCCAGTGGCCGCCGTCCTCCACGCTCCGGCGGAGCCACGTCGAGTAGTCGCCGAGGTGGTACTCCCTGAACCCTCTCCCGGACACGGGCCGCCCGGCGCCGGCGTTGGTGACGACG | |||||||||
gi|117247728|gb|CT856930.1|CT856930 CT856930 Oryza sativa (indica cultivar-group) cv. Guang Lu Ai 4 Oryza sativa Indica Group cD CTCTTGGTCGAGACGCCAGT EST sequence (targeted fragment marked with yellow): GTGAGACGAGTCGTTCAAAAAAAAAAAAAAAACATTGCGCGACGAGCATCCGATACTCGCCGCCGCCGCAGCGCGCGCCATGCCGCTCTCCGCGACGGATGCGGCGGCCGCCGCCGTCAAGCCGCTGCCGCGTGCGCTCTCGCTTGCGGGGGGGGCCGTGGCGGTGGCCACCACGTTCGCTGATCCTCATCTCCGTCGTCGTCTCCTGCGCCCACCAGTCCGCCTCCTCCTCCCCCTCCTCCTCGCCGACGCCCGCAGGGAGCGTCTCCTCCGTCGGGGTCGCGCCACGGGCCAGCGTATTTTGGTGCCTCGACCAGGAGGAGCTAGCACAACTCTCGATCGCCGCCCGCCCCTCCGTCCCGCCGTGCTCCGGCCCCCCTGCGAACCTCCGACGAGTCTAAGCTACCTCTGGTGGGAGGGGGGGGGGGGGGGAGGACCACTCCACCCCCCCCTCCAGTAGGCCAGGCCGACGCGTGGAGGAGCATCAGCAGGTGGCAGTCCTGGTAGTATGTCTTTAGAACATCACCGTGGCCAGCCGAAGGAGGATGAAAACCACACTGCAGGAAAACCCTGAACGATGCCCATTACAAAGTGATCTGGCCCACGTCCTTCAAGTGCTCTACAGATACCTAGTCTGGCTCTATCAGCGGTCACAGCTACTATCTCTCCCACCCGCAAGTGAGATTTGCTGATCTTGTTAGATTATATGTATCCCCGGGATGGTTCTGCTGTAGGCAATTCGGTCGTGGCGTGCACTCCTCATCTATGACCATTGATAGCCTCGAACTTTGCCCGTGCCCTGATTCTTTCTTCGTTGTACTGTTATTTCTATTGGATTTCCTGTCTCAGCTCTATGTTCTGTCTTCCATCGTTACTTGCGTCCACCTTCTTCAATCTCATGCCGAACTGGCCGAGCCGCTTCGCCTTATTTCCATCTCTTCACCGTATCACGCATGTGGCGGGCGTCAAGTTCTCTCGCATGGCGCTCCACCGTGATGTTCGAAACGAGCAGACGTACGGGTCTCGCACGCAGCAGAACACGCTCGCCTAGATAGCGGATGCGCCATCAGCAATGCCCATGACAGTGTCTCGCATTCTTGCGGCTCACCAACGCATATATACTCAACTCACGTTGCGCCTGACAAAGAACATTATGCTTAAGTCAGACCGGACGATGATTACAGTCGAACATAACTCAGGGGATTGATAGAGTCACGGTATGAAATTTTGACAGCGCGCGCCAAGCTACTCAATCACGAGCT | |||||||||
gi|88524069|gb|CI451955.1|CI451955 CI451955 Oryza sativa (japonica cultivar-group) 3rd week immature panicle Oryza sativa Japoni CTCTTGGTCGAGACGCCAGT EST sequence (targeted fragment marked with yellow): GATCCCCAAATTACACAGAAAAACTTCATGTCAATGTGGCCGATCTCACACAGAAACTTCAGGTCAGGTGGCCGATCAATTAATGACCATGAACGCACTCAACTAGAATACCAAAATACAGAGCACATGAGCCACGCAGTTACAGATATACTCCATATACTACAGATACTGAGCAATGAGAATGAAATGTACAGAGTAGAGCAATCGAGGTATCAACCCGGGCGTCGAAGTCAGGGGGGATGCAAATGGCCAATGGATTGAGAACCAAGGTGCTGTCTGTCACTCTGTCTACATGCGGGTCATGCCGATGCCGCCGACAATGGGCGGGGGCACGGCGGCGGCGTGGCGGGCCTTGGCGAAAAAGAGGTAGTGGAGCCTCGGCCAAGAGCCGCGGTGAGGAAGGTGAACGCGGCGCCGGCGGCGAACCCCCCC | |||||||||
gi|87005819|gb|CI316238.1|CI316238 CI316238 Oryza sativa (japonica cultivar-group) shoot Oryza sativa Japonica Group cDNA clone CTCTTGGTCGAGACGCCAGT EST sequence (targeted fragment marked with yellow): GACTTGCAAGCAGTAGAAATTTTTAAGGGGAACCATCTGCACAATATATGTATCTTGTTTGTCTACACCAAGGTTACTATTCCAAACCCTATATATCATGATTAAAACAGATCAAGAAAAAAAAGGATAAGAGGACCGGTTGAACATAGTAGAGCAGCATACTTCTGCTCTTCACAGCAAAAGACCTTTCATATTACTGGGAACTAGCACACCAACGGTGTGCGGTTGCATTGCCGCCTCCACCAAGAGGAGCTGGAAGGCGGGGTAAAACGGTGAATGCGCAAAGATTTGAGGCGGTGGATGGGTACTAGGGCTCCAGCTTCAGGGAGACGAATCGGGACTGCCGGTTCCGCTTGGCCGCCCTCACGAACACCACGATAGGCATGACGGCGCCCACCATGGCCTGGGGATTTTTGTCTACCCTTTCAGGCAGGTCATTTTGATGCGCATCAATCTTTGCACATGTATG | |||||||||
gi|87029203|gb|CI276471.1|CI276471 CI276471 Oryza sativa (japonica cultivar-group) mixed callus (Normalized Library) Oryza sativ CTCTTGGTCGAGACGCCAGT EST sequence (targeted fragment marked with yellow): TTTTTTTTTTTTTTTTTTTTTTTCTCAGCCGGAGTCAATGAACACACGGCAGTAAAAGGTGGCATTGACTCACGAACCCTGTCGACTGCGTTTCGACCAGGGGCAAACACACGAACAGCGCGCGCGCGCGCGCGCGCGCGCACACACACACACACACACACACACAAAACAGGAGCACAGGAGTGTCAAGGCAGGAGAGACCAAGAGAGATCCAAAACCCTCGGACCTACTTCTCCCCAGCTTCAGCCCTCCTACAGGTAAATCCTTTAAGCAAACCAAGCAGCAAAACGCTCTCTTCTCCTTCGGAGAGGGCGGCTACCTGTTGCGCATGGGCCATCTCCCTGATTCCTGAACAAACTACTCACACTGACACACACTCACCAAAACAGCTAAATTAGCTACACTAACCATGAATAGAATCATGAATGATCAGACCAACTAATTTGATGAGCTGCATAACAATGGAGGATGCCTGGCTCTCCTGCCTGACCGACTGCCACGTCGGGCCTGCCTTTGCGGGCCCACCTGGCAGTTTCCCGGGCCGATAAAACGTGGGCCCTGGGCCGGCGGACCCCCACCCGATCAGAGGGCGGACTCAAAGTTGAGGCGCGAGGTGTAGGTGGCCGTGGGCTTCCAGTTCCTGGGGATGA | |||||||||
gi|117242618|gb|CT855990.1|CT855990 CT855990 Oryza sativa (indica cultivar-group) cv. Guang Lu Ai 4 Oryza sativa Indica Group cD CTCTTGGTCGAGACGCCAGT EST sequence (targeted fragment marked with yellow): ATTTCTCTCACGGTCAACCCGCAATGCGTCTGCTTGCTTCCGTCTGCGTTCTCGTTGTTGCGCTCGCTGGCGCTTCGGCCAAGATCCTGACTGTCTCTGGTCGCGGTGTTCTGCTCTCGGCTCCCCCTCCGAACGTGTACAGCACTGGCCCGAATGACACTCCAAGCGCCACTGTGACTGAGAATGGCATTCCGGTCCTGGCTGTGACTGCTTTCAATGAGAAGCAAGGAGTTGTCCTCCAAGCCCCCTTGAAGGTCTCCGACAACCCCACCCTGATCCTGCAGCCTGGCATCCCTTACGACTCCTCCTTCCTCTTCTTTCACCAAAAGCGTCCCAGCTTGGTCAACATCGCGGCGTCAGCTGAGTTCATGGTCGACAATCGCTTTGTTGGCTGCGCTCTCGATGCTGGTAACACCGGAAAGTACGAAATCATCACAACACCCTACTTCGGATTGCCTGAAGTCGCATATCCTACTTCCGAAGAGTCTGCTCGCTGCTTGAGGGTGATGACGGTGTGCTCGGCGCTGGAACCAACTTCTCCTCTCACCACACGATTACTCAGCCTGCGACTACGTTCGTTGCTTCAGCGCTACCTGTGTTGACAACTCTGGGCACAGCTGTCAGTGCTCCACCAGCTTCAATCCGATCTGCCTGTTCGCTGTCAATAAACAGTATGCATGCTCCGCCATGTCGCTGCCCTGCTCAGCTCTCAATCCGCGGGCTTTCAATATCTCCTCACCTGCCCCGTGGATGTTTCCTCTGTGGGTCCGTTCGGGTCCCGAGCTGGAACTCACCAAATGTTTGCAAACCTTAAAAAGGACGGGTCGTTTTGCCTGAAATCAACCTCACACCCAACTCCGTGTCTTTTAAAATCACCGGCGGATGCGGGTTGCGACCAAATGGTGACCGCCCCCTTTCAAGGGTCCAAAAATGCCCGCGGGTGGCCCCTGCCAACGTAACCCCGTTCCTCTTTTTCAATTGGGGGGGGTAATTGGGGGATTGGAAATGGGCCAAGGAAGACCCCCCTTTGAAACTGGTTTTTTCACCTTTGTCCCCGGGGTTTTT | |||||||||
gi|29628176|gb|CB633187.1|CB633187 OSIIEb11O05.f OSIIEb Oryza sativa Indica Group cDNA clone OSIIEb11O05 5', mRNA sequence CTCTTGGTCGAGACGCCAGT EST sequence (targeted fragment marked with yellow): GCGCACGTCCGCAATGGAGCGCGAGGCGTGGCTGCTATGTGCAGCGCTCGCCGCGGCGATGGTCTACTACTACTACTACTACCTCGCCTGCACGACGCGCCGCGCACAGCGGCGTCTGCCTCCTGGGCCGACGCCGCTGCCGGTGATCGGCAACGTGCTCAGCCTGAGCGGCGACATGCACCACGAGCTTGCGCGCCTCGCACGGGAGCAGTACGGGCCCGTGATGACGCTGAAGCTGGGCCTCTTCACCGCCGTGGTCGTCTCCTCGCCCGACGCGGCGAGGGAGGCGTTCACCAAGCACGACCGGCGCCTCGCGGCGCGCACGGTGCCGGACATCAGCCGCGCGCGCGGGTTAACCGGCCGGTCCATGATATGGCTGCCGAGCTCCGACCCGCGCTGGAAGACGCTGCGCAGCGCGGTGGCCACGCACTTCTTCTCGCCACGGAGCCTTGCCGCTGCCCGCGGCGTCCGCGAGCGCAAGGTGCGGGACATCGTCAACTACTTCGCCGGGCACGCCGCGGAGGTGATCGACGTCGGCGAGGCCGTGTACGGCGGCGTTATCAACATCGTGTCGAACGCCTTCTTCTCCGCCGATGTGGTTGACGTCGGCAAGGAGTCGGCGCACGGGTTACGGGAAACATTGGAGGACATCATCTTGGCGATCGCGAAGCCGAACGTCTCCGACCTTTTCCCCTTCCTCCGCCGGCTCGACCTGCAGGGATGGCGTCGCTGGGCGGAGAAGCGCTACGACAAGGTGTTCGGCATCTTAGATGACAAAATCAACAGCCGCTTGGCCGACGCCGACGCTGACGCCTCGACGAAGAGCACGGCGACTTCCTGGACTCCTCCTCGAGCTCATGTCCGCCGGC | |||||||||
gi|58695225|gb|CK083912.1|CK083912 86423rsicen_7001.y1 Oryza sativa cv. LYP9 booting whole plant cDNA library Oryza sativa Indic CTCTTGGTCGAGACGCCAGT EST sequence (targeted fragment marked with yellow): GATCCCCGGGCTGCAGGCCTGTTCGCTGTTCGTCCTCCTCTCTTCCTCCACTTCATCTCGGTGGACCTTTTTTTTTGCTGCGAGAAACGTAGATCCAGCTTGTTTCGATGTCGAAATGCACAGCAAATATTGGGCATGAAACCTACAGGATCTTCATCGTCGATAACGGAGGCAAGAACTACCTCGCCGTGGACACGTCCGGCAACGTCGTCCTTGTGGAAGATCCGGAGAGAACGCAACCCTCCAGCAACTCCTATGGCCGACAGCTGATATGGTACAAGGTCGTCGACGAGGCCACCGGCGGCGGCGGCAGCACAACTAACCAGAACTTCGTCCTGAAAAACAACAGCAAGCCCCTCGTCGTCAAGAGTAGTCGTGGCGACGGGCGGCAGCGGCTGGATGTTGTTCTTGGCCANGGAAGAGATGTTGGAGAACGCTGGACGTTGGAGGAGATACACAAGGGCGTATGCTACATCAAGAGTGGGAGCTACTCCAACCACATCTTCACTGGCGTCTCGACCAAGAGGACCGTCCACCTGCAGGAGAAGCGCTTGGCCAATGCCCTCTCCCTCTGGACGTTCGTCCCGGCCGAGGACGCCGATC | |||||||||
gi|58680146|gb|CK068833.1|CK068833 64668rsicem_0425.y1 Oryza sativa cv. PA64s panicle ferile cDNA library Oryza sativa Indica Gr CTCTTGGTCGAGACGCCAGT EST sequence (targeted fragment marked with yellow): GCACGAGGAATGGCGTCTCCACCAAGATCCCTTCCTCCTCCTCGCCGTCCTCCTCCTCCTTTCCGTCGCCTTCCCAGCGGAGGTGATGGCAGGAGGGCACGGGCGCGGCGGAAGCAGCGGCGGCGGCGGAGGGGTGGCCGGCGGCGGGAACCTGAGGCCGTGGGAGTGCTCGCCCAAGTGCGCGGGCCGGTGCTCCAACACGCAGTACAAGAAGGCGTGCCTGACGTTCTGCAACAAGTGCTGCGCCAAGTGCCTGTGCGTGCCGCCCGGCACCTACGGCAACAAGGGCGCCTGCCCCTGCTACAACAACTGGAAGACCAAGGAAGGCGGCCCCAAGTGCCCCTAAGATGCATGCTTTGTTTCTTTTCTTCTTCTTTTTTTACCCTATGATTAATACCTCCTCCTACTAGTTCTACATTGGTGTCACTGCCTCACTGACACTGGTTTAGCTCATGGATCCGGTTGATTAGTTAAATGGTGGTGGGGTTTATTGCTAGATCT | |||||||||
gi|29665352|gb|CB661627.1|CB661627 OSJNEd04M21.f OSJNEd Oryza sativa Japonica Group cDNA clone OSJNEd04M21 5', mRNA sequence CTCTTGGTCGAGACGCCAGT EST sequence (targeted fragment marked with yellow): CCGCAACGCACGCACGACAGCCAGAGAGAGAGAGAGAGTCAGACCGCCGACACCCGACGACATGGCCGTCGCCTCCGCGTGGGCCAAACCCGGCTCGTGGGCCCTCGCCGCCGAGGAGCAGGACGACCTGCCCCCGCCGCCGCCGCCCGTTCCCGCCGCCGACTTCCCCTCCCTCGCCACCGCCGCCACCACCAAGGTCCCCAAGAAGAAGAAGCCGCAGCCCGTCCCGCTCGGCGAGTTCAACAGCACCAAGTTCGTCGCCCCCGCCTACCGCGGGCCCACCCAAGACGACCTCCTCAGCCTCCCCACAGGCCCCCGCGAGCGCACCGCCGAGGAGCTCGCCAACGCCACGCGCGGCTTCGGGGCTCGCTGGGGCGGCGCCGGCGCCGGTGGCCCCCGCGGCGACGACGAGCCCCGCCGCGGCGGATCTGGCCCCCAGGACTTCGGCCCGTCGCGCGCCGACGAGGCCGATGACTGGGGCGCCGGCAAGAAGCCGCTCGAGAGGAGGGAGCGCATGGGAGGGTTTGGCGTGGACTCTTCGATGTCGCGTGCCGACGACGTCGATGACTGGGTCTCCACCAAGAGGGCGGCAGCCCCCGCGCCCATGGAGCGGAGGGAGCGTAGCGTGGCGTTCGGGGCCGACTCGCATTCCCGCGCTGATGATTCCGCGAGCTGGATCTCCAACAAGGGCTATTCTGCGGCGCCGCCACCGCCCTCCGACAGCCGGAGGGGCGGTCCAGTCTGGGGTTTCAACAGGGATGGAGGCCCAGACGCCGACTC | |||||||||
gi|112786945|gb|EE591748.1|EE591748 NEW_RNG103-B04 Rice mixture of leaf, root, panicle Oryza sativa Japonica Group cDNA, mRNA se CTCTTGGTCGAGACGCCAGT EST sequence (targeted fragment marked with yellow): GCAATAGTCGACCACAAACCATGGACCCGACGTCGAGCAGCACCCAGGAGCGGGAGGAGGACCGCCAGCCAGAGGCCGCCGGAGCCGACGGCGACGACGGTGACTACTCCGCCACCGACGTCACGGTGCGGCTCCTCTGCGACCTGTTTTATCCGGGCGGGGAGAGCGAGCTGGCCCGCGTGGTCCGGAGGTACACGGAGCTGGAGGCGCAGCACAGGCAGGACATGGAGAGGTGCCGCCAGGCGCACGACGAGTTGCTAGAGTCCCAAGCCACCCTCCGTCCAGGCCTATTAGGACGGGAATTAGTGGACATGGCCGCCGCCGTCGAAGTCGCGACTGCCGCACTGGAGTTCGACGGCGGCCAGGAGGACGACGATGGCGCCGCCGTAGATCACAAGGACACGGTGACGATCGAGCTTGCTCCGGCTACGACCACGGCCATCGACGACGTCGATGGAGATCAACCGCCAACGACGATGGCCACGGCCGTTTCGATCAGGAGTAGCGCACTACAAGAGAAACGCACGGTCAGTAATAATATTCTCACTGGCTGGTTGGAATAAATATATTAGGGGAGTGTGTAGTCATGGTAGAAACCCAAATCACTCCGTGTACGTGCATGTTTACTTATCCAAAAGGCATACGTGGATTTTTTTTTTTTGCCGTTACACGTGTGCTTATGGGTTAAGTTTTTTTTTTTCTTTTGAAAGGAAAAGAAGGGTCAAGTTGCAATATGCATGTGGATGAGAAGTGGTAAATCTCATTGAGGAAACAAGTTATTTACTGTTTAAGTTGTTCAGTCTATTCGGCA | |||||||||
gi|88832755|gb|CI369645.1|CI369645 CI369645 Oryza sativa (japonica cultivar-group) callus Oryza sativa Japonica Group cDNA clone CTCTTGGTCGAGACGCCAGT EST sequence (targeted fragment marked with yellow): GACACTAATATAATACTCATATTTAGCAATATAATTAACGTACGCAGTTCGAGAACCCATAGCACAATCTAGCCCCATGCATTGCAGGCTAGGTAAAGGTAAAGCAAATCGCACAAAATAAACCGAACCGACCCAACAACGCGATGTTCAAAAGGTAAAACAGATAAGCTAGCTCCAATGCTCCATGGTGTACTTTCGCTGCGAAGGATTTGACGAGGGGAAAAAAAAGGAAACCCGCTTAGTCGACCTCCTCCATCTTGCTCTCGCCGGCGTCGTCCTCGAGCGGGGGCATGTCGGTGTCGGCCTCCGCCGTCTCGTCCTCGTCGATGCTCAGGCCGAGCTTGAGCATGGGGTGGATCCTGCTGCCGAAGGTGTTGGGGTCGTCGAGGCTGAACCCGGAGGTGAGGAGGGCCGTCTCGACCAGGAGCCCGACGAGGTCCTTGACGGAC | |||||||||
gi|88456069|gb|CI567709.1|CI567709 CI567709 Oryza sativa (japonica cultivar-group) shoot Oryza sativa Japonica Group cDNA clone CTCTTGGTCGAGACGCCAGT EST sequence (targeted fragment marked with yellow): GACACACCTACCCGAGGAAGAGGAGGAGGTGGGGTGGCCATGGCGGCGGCGGAGAAGACGAAGCCCGTTCTTTACAGCGAGTGGATGAGCTCGTGCTCCTACAGGGTCCGGATCGCCCTCAACCTCAAAGGTAACCAGCGAGACCAGTGGCCGCGTCTACTGCTTGCTTCTTGGATGGTGGATTCCGTTCCACGCCCTCGGGGGAGGTGGGGATAATGTGGCCCGGTTTCTTGGTTTGATTGGATTGGGGGAAATTGATGTTGTTATTAGAAGAACTCTTAGGTAGTTTAGAGGATTGGAGGAATGCCTAGGATTGGATGGATTGGGTGCTTCAAACCTGCAACTGCAAGTTACACGTGTGTCTCGGCCAAGGGGGGAAAAGAGAGAAATTCATTTCGTTGATTATTAAAGATTCACTAGCTAGTGGGTTTCAGCACTAGTATTATGTCG | |||||||||
gi|86527453|gb|CI167659.1|CI167659 CI167659 Oryza sativa (japonica cultivar-group) shoot and callus Oryza sativa Japonica Group CTCTTGGTCGAGACGCCAGT EST sequence (targeted fragment marked with yellow): TTTTTGACTGTTCCAAACCCAAAAGTAACTATTAAAAGGTCCAGCCATATTTTCCTGAGAGATTCTCAAATCTCAATCAAGAACTCAACCAACACATATTTACTAAACTAGCGATCATTCATAACATGGAAGCGCATATTTACTGAAGCATAAATCTTTTTCCTGAAATACTACAGTTGTTCATGTAGCCAACCAGCAAGCAACACAACACAAACACACACGCCACAAAACCTTCATCTGAGCAAAAACCAAAAACCCTCATCATTTCCCAACCAGCGAGTACTTGTGCCGCCGGTTGTTCCGGAGCGCGCAGCAGCCGAGGGAGTAGACGACGAGGAGGAGGGCGACGAAGGCGGCGTTGACGAAGGCGATCTTCTTCCAGCTGCTCCTCAGGTTGCCAAGAACACCGGCCTTGCAGGACTGGCAGCCGTAGCAGAGCTCAGACTGGTCATTCGACCAAGAGTTGCAGTCAGGGTCTGAGTAGTTGCTGGGTGT | |||||||||
gi|66918050|gb|CX104898.1|CX104898 BI105C20 A normalized whole-life-cycle cDNA library of rice Oryza sativa Indica Group cDNA cl CTCTTGGTCGAGACGCCAGT EST sequence (targeted fragment marked with yellow): TACGGTCCGGAATCCGGGTCGACCACGCGTCCGGGCAAATCCGCGCCTTGATCTGGCGGGCAGGCATCCGGCGGCGCCCCGGTGGTTGACTAGCGGCGGCGGCGGCTGCATCTGTGGATGCGGTGGCCGGCGTCGGGGCGAGTTGCGGGCGTCGATGGCTGCGGCTGGCGGTGGAGGGAGCGTCGGCGCGGCGGCGCTGGAGGCCGTGATGGCCGTGGAGGGGCAGGAGGCCACGCCCTCGGCGGAGGGCGGCATGCGGGGGGCCGGCGTGGTGGAGGCGCGGCTGGCGGCTCGACCAAGAGCCCGTCTTTGCCATTGTTTACGAGGTATGGTACTTGCGAGTCATTATGCGAGACCTTCTATGGCCGTCGATGGGGTGCTTGTGTGGGTGATATGAAGACGCTGGCGAAAGCCTTGCCGTGCCTTTGGCCGGTTTGACGACGACGCCCGTAGGCGCCGTTTCCCTTCTTGGAGGTGTTGTCGTGGCGTTTTTCTTCTATATCGCCCACAAATATCTAGGTAAAAACCTTGTTCCGGTTTCGGACGAGCGGCGCCGATGTTATG | |||||||||
gi|88448450|gb|CI693830.1|CI693830 CI693830 Oryza sativa (japonica cultivar-group) young ear Oryza sativa Japonica Group cDNA cl CTCTTGGTCGAGACGCCAGT EST sequence (targeted fragment marked with yellow): GGAGAAACCGGAAGTCTCTTTTGAGGTTGCAACGCACGCACAGTTTGCATCCGCAGCTTAGCTAGCGAGTGACGAGATCACAGGGCATGATGAGTCCTGGCGTTTCGGCCAAGAAGCGCCACGCCGGCGCGGGGTTCACGCTCGGCTGCGGCTGCAAGGACGCGAAGAGCGTGTCCGTCTCGGCATCGGCGGCGGGGACGCCGTCGACAACGGCGACGCGGCGCAGGAGCGCCGGGACGAACCCGTCGGGGTCGACGACGACGGACACTCTTACCATGACGTCCGCGTCGTCGTCCTTCCTCTGGGAGCACTCCGTGGTGGAGTTCGACCACGACGGCGGCGGCGGCTGCGGGCCGGAGAGCTTCTCCGGCCTTCTGCGCGAGCTCAGCGAGCTGGAGCAGAGCGTCGCGTCGTGGGGCCG | |||||||||
gi|88525711|gb|CI452737.1|CI452737 CI452737 Oryza sativa (japonica cultivar-group) whole body 3mM SA(salicylic acid) for 1day Or CTCTTGGTCGAGACGCCAGT EST sequence (targeted fragment marked with yellow): AACATACAACCAAAATTTCAAGCTCTGTACATTTTTATTGCACGGTTAAACAGTATATATATGTTACATTTCCCATGGCTATATTACCTAGGCTCAAGGGGGATAGTTGGGAGGATCCTCAAGACCACAGAAACACAGCAGCACAGCATTTGATCACTATCGCTGCAAACCAGCCAGGCCGGCCCGGCCTTCCAATGATCGAAACAGGCAAAAAGGAAGGGACAGAGATCGAGAGAAGAAAAGGGGAAAAAAAGATCCAGCTACATCCAAAATGACCCATCTGGGCATCTCAATCAAGAGGCTGGTATCTCGATCAAGAATCNGGCCCAGAACACCCTACACTATTAGCTAGCTAGCATTGGAAAACTCCCATGGCTGACCCGATCGATCAAATTAACCGTACCCGCGCGGCAAATCGAC | |||||||||
gi|86859723|gb|CI345391.1|CI345391 CI345391 Oryza sativa (japonica cultivar-group) flower Oryza sativa Japonica Group cDNA clone CTCTTGGTCGAGACGCCAGT EST sequence (targeted fragment marked with yellow): GGAAAACAATATTTGATTTTTTATAATGTTATAAGCCAACGGGATAACTATTAATAACTTCTAAGAAAATCATGTGTAAAGAAAATTTAACATAATTTTTTATGTACGCTAGCGAGTAGCCGTGCTACTGCGCGGGACTTTATTTAAAAAAGCAACCTTTGAGGTTAATTTGCTTTGGACGGGTGTCGGCAGTCATGAGTTCACTGTGCGGTTGTACATGCGGCTGGTTGAACACGCGCGAGCTCGTCCAGCCCCACCGGCGAACACGCGAGGATGAAGCGTCCCAACGGCTCGCGCCTCGACCGAGGGCGCGCACGGCAACCATTCCCATCGCTTCCACGGCGCTGCTCCACCAGTAACGTAGCTCGTACAGCACGGTTCCGATTGTCGGGTCGGGCGCATTGTACACGTACCCTCCGGCGGGGTTGCCGCACACCCCGATCGACGGCGAGATATCCTATTCGTCGTCCTCATCGCCG | |||||||||