| mature miRNA: CTTAGACACTTCAGCGCCATG species: Oryza sativa database: miRNEST The numbers on the right side of the alignments show a score calculated for them. When calculating the score, a mismatch is given a score of 1, bulge: 2, and wobble: 0.5. |
| Predicted miRNA targets | |||||||||
gi|44679678|gb|CR293112.1|CR293112 CR293112 Oryza sativa library (Han B) Oryza sativa cDNA clone y878g03p5, mRNA sequence CTTAGACACTTCAGCGCCATG EST sequence (targeted fragment marked with yellow): TTCGGCCATATGGCCGGGGGGAAGTTTGAGCTGAGCTGAGCTGCTCTCTATAAAAGAAGCCAAGAAGGCTTCACATCCGCAAAGATAGCTACTTAGCCACTGCATATCTTCCAGCTTTTGTCATAGCCTTTTTTGTTTCTTCTCTTTTGGTACAAATTCAGGGTCTGGAATACTTGAATCAGTGAGAAGAAAAAACAAGATGTATAACCCTCCAAGTGCCCAGGAGATGACATACAAAGATCATGTTCAGAGGCGCCATGAGGAAAAAGGCTGCTTATATGCATGCCTGTTTACACTGTGCTGCTGCTTCTGCTGCTACGAGACCTGCGAGTGCTGNCTCGAGACACTCTGCTGCTGCTGCTGACGTCGTCATGACGAAGTGATATGCAGACTGTGACGTCCACTGGGACACACATCGTTGTCCATCTGCTTTGTCTGAATTCCAAATGTCTCTATGTACTTAAATTACTATTTGAATGCTGTAAATCTGCAATGCGTTGCGTTGAAGTGTCTAATTACCTTTTCTTCTCCTCGGCACTGGATGGCAACCTGGAGTATCCGCATGTCCACGAAACAAGACCCTATGACGCGTTGGGGCTGGAACCCAAGGTTGTCCCGGTTCGCCCCACACAAACGACAGACCAACAACCACTGCGGCCGTCCACAGACTGTACCACACACATACCTGAGGCAACCTACC | |||||||||
gi|86869615|gb|CI322101.1|CI322101 CI322101 Oryza sativa (japonica cultivar-group) shoot Oryza sativa Japonica Group cDNA clone CTTAGACACTTCAGCGCCATG EST sequence (targeted fragment marked with yellow): CTAGCGCACCCGCAACAGCGGCCATGTGCTTGTATATATGTATTTATACGCTCGCACGTACCTAAGTACGTACGCTATACATATGCAATCTGAGATCGCTGCGCCACACATTATGTACGGTTGGATTAATACATTTATTGTAATATATCTGTCTGATACCGCCATCTGTCTGATGATCACTTCCATGCGTACCGCTTCCTCACGCGCTACATATGTAGATAGAGTTTAAGAGTGGAATCGCCTATTTGCGTGGTGGCGGGAATTAGACACGCTTATCTTGATCCCTGGGATCACCCCATATTGCTCCGCGTGCCCGTGGCGCTGAAGTGTCAAAGTGCAAGTATATACAAATTACAAATCATTAGTCTAGATATATATGTATGTCTGATCTGTTGGTTTGCAGTACTCATGCACCGGTGGCCTGAACCCCTATCCCGTGGCTGTCCTTCAGTACTGTTTGGCTGCTTCACATTACCCCAATCGGGAGCCCCTGTGTATGGGAGCGCCTGAGTCTGGGAT | |||||||||