| mature miRNA: GAGCTCGAGCTCGAGCCGAAC species: Oryza sativa database: miRNEST The numbers on the right side of the alignments show a score calculated for them. When calculating the score, a mismatch is given a score of 1, bulge: 2, and wobble: 0.5. |
| Predicted miRNA targets | |||||||||
gi|88581760|gb|CI698965.1|CI698965 CI698965 Oryza sativa (japonica cultivar-group) 35 days after pollination pistil Oryza sativa GAGCTCGAGCTCGAGCCGAAC EST sequence (targeted fragment marked with yellow): GCAGCCTCACCCTCCTCGCGCCGCCTCTCCCCGCCCCACCGATGCCCTGCAGCGCCGCTCCATCCTCCGACGCCTGTCCTGGCCCCGACACCGCCGTGCGTCGCCGCATGTCCTCCACTGCCTTTCTCTCTCTCTCTCCTTGCTGCCGGTGCCGCTGAGCTCGAGCTCGAGCTCAATGGTGAGAGGCTCAGTACGTCGACAACGAGTCGGTCGATCCAACATTCAATCGGGTTAGGTCTTCGTCCTTCTCACTACCTCGTCGTCGATTTACCTGTCTACTCAATACAAGCTCCACGCTGCCTTCCGATCTGGTGGTAGCTGCCGTGCAGCGATCGGATCTGGCGAAGGGAGGAGGAGCGCACGGCGGCGTCGACC | |||||||||
gi|55408196|gb|CV720572.1|CV720572 YBH--01-B10.b1 Rice before heading yeast two hybrid lambda phage cDNA library (YBH) Oryza sat GAGCTCGAGCTCGAGCCGAAC EST sequence (targeted fragment marked with yellow): GGCACGAGGAGGACTCGGTGCGCCGCAGCGTCAAGTGGATCAAGGGCAAGTGCTCCCGCGCCGTCGACGGCAAGTGGTGATCTCTCCCTCTCACCCTCTCTCTCGCCATCGCCATCGCCATGGCTCGAGCTCGAGCTCGAGCTAGCTCCTCTTCGTCGTCATCTTTCTTGCTCTTGGGTGTGTTTGAGTCACCGTTGATTGCTACCTTCCTCCTACCTGCACTGCACACCTTCATTCGATTTGTTACTCCTTCTTGTTTTCTTCTTGGATATTAGGATTTTAATTTTGACGAGATTTGGTCTGCATATAGCTACTGCAGCCATGTAGTTACTACTACTACTTAGTATAATTCAGTATGAGGAGATACATATGAGCAGTGGTAAGCTTTTGCCTTGGTGTTTTGCTGCAGAGCAAAAAATCCAAGGAAAAGTTGATCAGTGTGTGGTGTGCTTG | |||||||||
gi|29663624|gb|CB659899.1|CB659899 OSJNEd01D17.r OSJNEd Oryza sativa Japonica Group cDNA clone OSJNEd01D17 3', mRNA sequence GAGCTCGAGCTCGAGCCGAAC EST sequence (targeted fragment marked with yellow): TAGTGAAGTGTAAGGTAGGTTATACTTCTGTTCAAAAAACAGGTAGGTTATACTAGCAAGGCCTATTCCTATGTTTTGCATCATAGGTTATCAATTTCAAGATTACAGTTGTTCGTAGATGGATATATTTAAGCTCCTCTTTGCGGCATATCTTAAACAAATGAAGAATTACATCTATATGCTTGTATCATAGCTCAGAGATTTCCCCAGGTTAGGGCCTGCTTGGAAGTCCGGTTTTTGGCCTAATGCCCATACGACTGGAAAATGGATGACCTTGGAAGGCCACACTATTTTTCACACATTTTTTCTGAGAAATCTCAGGCTTGCCTTGAGCTCGAGCTTGCTCCACCCTCCTCGCCTCAGTGCCTCATTGCCACTGCCACTTCTACAGTAACCACCAACATCCTCCTGGCTTGAATGAGCGACGCGGGCCTCCTCCAGCTTGAATCCATGCCACTGCCCCCCTCATATTGGTGATCCAAGTTGTCATGTCGTCTGTTCTCGATACAGCCCTCCTGGAGATAGGCAGCAAACCCATTAGCAGGTGCAGCAGCGGTCACTCTGTTAGTTACTCTAGAGAACATGGGCATCAACAACAGATGGCGATGCCAGTGACCTCTGCCAGTGCTGAGTGGATTTCCTCTGCCTTTGATAGCATAGCACACGCCTCATCCTCATCACCCCTGTCCCTGAATGTGCATAGCTTTTTCAATGATTCGGTCTGAACTTTATACCAGTGAGTATAAATTATGTTGTGTTGTTGCATGTATAGATTCAGAATTTGCTTTCCTTGATGCTAAAACATTTGTTGTGTACTCGCTTCTAAAGCATGATAGGGGCAATACACAGTCAAATTGCTC | |||||||||
gi|87038689|gb|CI192728.1|CI192728 CI192728 Oryza sativa (japonica cultivar-group) root of seedlings Oryza sativa Japonica Group GAGCTCGAGCTCGAGCCGAAC EST sequence (targeted fragment marked with yellow): TTGAAAAATGATACCCTCTTAGNGCAAACTTATAATGTGGACATATAAGTAGTGTTCTATTTGTAAGGCCTGTTTAGTACAACTCTAACTCCTAAATATAACTTTAGGAGTTGAGTCTGAAGTGGAGTTGTGGAGCTGCCTAAACCCAGCTCTACAACTCCAGTACATTCTGTGAGAGAGCTCTACCCAACTCCACTCCCATTTTTGGTGGAGCTAAAACTGTTTGGCTGAGCTCCAGCTCCAGGAGGGGTGGAGCGGGAGCTAGAGCTGTGCCAACCAGGCCCATAGTTTTGAAGGGCTGATGATCTGATAATCCTATTTATAAGAAACCATCCACTACATTTGTAGTTTAGAAACCATCCACTACATTTCATCCGCATGTGGCGAACCTACTCGTATCGGATGATTATAGGATTAGGAGTCATCTGGAACTCCTTTTGCTCCACATTATACCTTCACCTACCTGACACTCCAGAATCCTGATGCAGCTGCTCCGTTTATCAGGACATAGGTGTTGACGCAGCTGCTCCGTTCATCAGGATTTAGGAGGCGTAACACCGG | |||||||||
gi|117247135|gb|CT848553.1|CT848553 CT848553 Oryza sativa (indica cultivar-group) cv. Guang Lu Ai 4 Oryza sativa Indica Group cD GAGCTCGAGCTCGAGCCGAAC EST sequence (targeted fragment marked with yellow): AAAACTCTGTCTCGCCCATCCTCCCTGAAACCCTAGCCCCCGTGCCGGTGCGTCGCCTCACCCTCCTCGCGCCGCCTCTCCCCGCCCCACCAATGCCCTGCAGCGCCGCTCCATCCCCCGACGCCTGTCCTGGCCCCGACACCGCCGTGCGTCGCCGCATGTCCTCCACTGCCTCTCTCTCTCTCTCCTTTCTGCCGGTGCCGCTGAGCTCGAGCTCGAGCTCAATGGTGAGAGGTTCAGTACGTCGACAACGAGTCGGTCGATCCAACATTCAATCGGGTTAGGTCTTCGTCGTTCTCACTACCTCGTCGTCGATTTACCTGTCTCCTCAATACAAGCCCCACGCTGCCTTCCGATTTGGTGGCAGCTGCCGTGCAGCGATCGGATCTGGCGAAGGGAGGAGGAGCGCACGGCGGTGTCGACTTGAAGTAGGTTGCTGGCGGCGTCCCCAGCGTGGTGGTGTAGGCCGATGGGCCCAGGAGGCGAACGCCTCGAGCTTGCGAGAAGATGGCGTCGGCACGGAGTTCTCGAAGGCGAGGAGTCGGTCTGGCGGCGCATGACTTGATTTTCGAGTGATGTGGGGGCTCCATGAGCAGTGGCAAGCTCCTGTTTTTTCTGGTCATCAGAGGGAGGAGGAGTTGTCTCCATCGCCTAGCCGTTCTCTGGATGCATCAAGCTTGCCCTCATCGCATCACGCCATCGTCCACTGGTATTTGATTTTCATTTCTATTCCCCAACCAAGATTTGAGGTGTTGGTTTGGTGTGATGCCCT | |||||||||
gi|58602268|gb|CK012796.1|CK012796 30269rsicef_9187.y1 Oryza sativa cv. PA64s panicle sterile cDNA library Oryza sativa Indica G GAGCTCGAGCTCGAGCCGAAC EST sequence (targeted fragment marked with yellow): GAATTCGGCACGAGGCACCAAGCCGCCGTCGACGGTGCGGCTCGGGCGTTGTGAGCGCGGACTCGTCGGCGCCAGGTCCGGCGGAATTCCTCTCGTGGGCGTCCCATCCGCGCCGGCGGGGCTCAGGCGGGAGCCGGATCTGGTGGCTGCGCCGCCGNCATCCCCGCTGCTGCTGGCCTTTGCTCTAGGCTTCGTCCAAGGGAGAGGCAGGGGCACGAGGGGAGCGGCGCTCGCTTCCCCTTCCCGTCCGAGCGCACGCAGCCGGAGCAGCGCTGCTAGCAAACTGCTTCGACCGNCTGATGGAGGAGGCGGAGGCAAGGCCCGCGCCGCCTGACCCCAACGACGCGAGGCAGCGGTTCTGTTGGAGCTCGAGTTCATCCAGTGCCTCGCCAACCCTACCTACATCCACTATCTAGCGCAGAACAGATACTTTGAGGATGAGGCGTTTATC | |||||||||
gi|88826170|gb|CI776735.1|CI776735 CI776735 Oryza sativa (japonica cultivar-group) root of seedling gamma-irradiated (9.5min), a GAGCTCGAGCTCGAGCCGAAC EST sequence (targeted fragment marked with yellow): GATTCGGTTGTTTTTCCGACGAGAATTACTAAGAAAAGAAAAAAAATGAAGTTCGCTTTACTTTTGATCGCTTTGAGCTTGAGCTCAGTCTTCGCCGTTGAGGACTTGTCAAAGGAGCAATGGGCCATCTTCAAGAAGGTCCACAGCAAGGTCTACGAGTCACTCGGTGAGGACCAAGCCAGATTCGGCATCTGGAAGACCAACTTGGACTACATCAAGAGACACAACGCTGAGGCTGCCACTGGCAAGCACACTTACACTTTGGCCATGAACAAGTTCGGTGATTTGACTTCAGTCGAGTTCGCCAGATTGTACAACGGTTTCAACGCCACCCAGAAGTTGACCACTTCAAAGCCAGGCAGAGTCTTCTCATA | |||||||||
gi|33677135|gb|CF305374.1|CF305374 CLD1--01-I15.b1 Rice cold treated leaf plasmid cDNA library (CLD1) Oryza sativa Japonica Grou GAGCTCGAGCTCGAGCCGAAC EST sequence (targeted fragment marked with yellow): GCCCTTGGACACTGACATGGACTGAGGAGTAGAAAGACCCTTCGCCTCGAGCTCCAGCTCTCCCCAACCCCTTCACAATGGCGGATGTCGAGGTCGAGGCGGAGGTGGCCGCGGCCGGAGCGCCGAAGAAGAGGACGTTCCGCAAGTACAGCTACCGCGGCGTGGACCTCGACGCGCTCCTCGACATGTCCACCGACGACCTCGTCCAGCTCTTCCCCGCGCGCGCCCGCAGAAGGTTCCAGAGGGGCCTGAAGAGGAAGCCCATGGCGCTCATCAAGAAGCTCCGCAAGGCGAAAAAGGATGCACCTGCTGGTGAGAAGCCAGAGCCTGTGAGGACCCACCTCAGGAACATGATCATTGTGCCTGAGATGATCGGAAGCATCGTCGGTGTCTACAACGGCAAGACCTTCAACCAGGTTGAGATCAAGCCTGAGATGATTGGCCACTACCTCGCAGAGTTCTCCATCTCGTACAAGCCAGTCAAGCACGGTAGGCCTGGTATTGGTGCTACCCACTCCTCACGGTTTATCCCTCTCAAGTGAGAGATCATCTGCAGCTGTTTGCGC | |||||||||
gi|29686829|gb|CB683104.1|CB683104 OSJNEf11B04.r OSJNEf Oryza sativa Japonica Group cDNA clone OSJNEf11B04 3', mRNA sequence GAGCTCGAGCTCGAGCCGAAC EST sequence (targeted fragment marked with yellow): CGTGGTTGGCGGCGGCCCGGAGGAGGCGTCGGCGTGGACGAGGTTTTGGCGGCGGCATGCAGGCTGCTGGCGACCCCAGCCGGCGGAGGCAGAGGTAGAGGACGCCGGTGCCGTGGGGGTTTGGGAGACGAGGTGGCTAGATCCACCTCCCCTGCCCAGACTCAGCGTCACAGCGGCGCTTGTTGCAGCGGTGGTGAGGCGGCAGGGTGCGGCTACGTGGAGGAAAGGGCGACTCCCGTGTGGCGACGGCGGCGGTGTCTGTGGCGTCTGGCGGTGGCTGTGGCTGTGGCGGCGGCCGCCGCGGCTGCTGTGGCCGCGATGACAACGACAGCAGCGGCTGCTGTGGCACGGTGGAAGGAGGCACGGTGGTGGTGCGTTTCGGTAGCAGCGGCTGCGGTCGCGGTGATCGTGGTCACCGGAGACATGACGGCCTCGACGGCTAGCCGAGGGCGTGGCAGACGGCTGCATCTGGCTGGCGCGGCATCGTTTGGAGGAGGGGTCGGAGACTAGGGCTGTCAACGAGACGAGCTCGAGCGAGCTCGTCTGCCCAAGCTCGAGCTCGACACAAGCTCGAGCCAAGCCTATTGCACCTTCGAGCTTTTAGGCAAGTTCGGCTCGAGCTCGAGCTCGGTGCCGAGCTCGGCCATAAGTAGTATAATATATATTTTAATAATAATCTCTTGATAAGTATAATTATTTTCTAGTAATCACAGGTAATAAAAGAGTAGAAAATGATTAAAATAAAAAAAAAAAGAAAAAAAAACTCGAGGGGGGGCCCGGTACCCAGCTTTGTC | |||||||||
gi|86502958|gb|CI145591.1|CI145591 CI145591 Oryza sativa (japonica cultivar-group) mixed shoot (Normalized Library) Oryza sativa GAGCTCGAGCTCGAGCCGAAC EST sequence (targeted fragment marked with yellow): CAAGGGAAGAACAATACACATAAACAACGAAGAGCTAAGCAACATCAAGGGTGGCATCAAACTAAAGATATGATCTAATCAATTGTTGCCTAATACTATTTTTTCACTGCCCCTGGTTGTTGTGCTTAAGTAGCCACGACGACTCGGCGGTTGCTGCAGAGGAGCTCGTCGACGAACGCTCGCCACTCGTGGAAGAAGAAAACCCTGCACTGGATGACGACGAGCTAGCTGCCGCCGCGTCGCAGTACAATGCAAGGCTCGGCAAGGAGGAGTACGTCGGCACGGGCATCGTCGGAGGAAGAGCCGGCAGCGGAGCCTCGAACTGGAGCGCGGCGAGCGCCTGCTTGATGGACGGCCGCACGCCGCGGTCCGGGTGCGCGCACCAGAGCCCCACGACCATCACGCACTCCACCTGCTTCGCGTCGAGCTCGAGCTCGCCGCCGCGCAGCCGCTCGTCGGCCGCCTCGAGGATGGCGCCGCGGCCGTGGAGGTCCCAGACCCACTCGAGGAGGCGGGACCTGATGGATTGTTCTTGGAGCAGCACGGGCCTCCTCCCGCAGCACATCTCCAGCAGCACGATGCCGAAGCTGTAGACGTCGGACGCGGTGCTCGCC | |||||||||
gi|33664922|gb|CF295889.1|CF295889 30DGS--06-A10.g1 Rice leaf plasmid cDNA library I (30DGS) Oryza sativa Japonica Group cDNA cl GAGCTCGAGCTCGAGCCGAAC EST sequence (targeted fragment marked with yellow): GTACGTACATACATACCCCTCTCGATCACACGCACCATCGATCGTACAAAGTTGCGTACATACATACGTACACACATATACGCATACGCACGTACATACATACATAATTAAAAACTCGTAATTAATTAAATACGTAGTTGATGGCATCTCTAATGGAACTTGAGGCTGGTGAGGATGTTGTTGTGGACGGGATCAGCGAGGTGATCAAGCAGGTTCTGCACGGGGCCAACCCCGGTGAAGAGCGCCTGGACGGAGAAGCCGAGGAAGGCGAGCATGGCGAGCCTGCCATTCTTGATCTCCTTGAGCTCGAGCTCCTTCATCTCCGCCT | |||||||||
gi|29681238|gb|CB677513.1|CB677513 OSJNEe14I13.f OSJNEe Oryza sativa Japonica Group cDNA clone OSJNEe14I13 5', mRNA sequence GAGCTCGAGCTCGAGCCGAAC EST sequence (targeted fragment marked with yellow): CAAAAACCCTCCTCCCCTCTCCCTCGCTGCGTCCTCCACTCTTCTGCTCTAGCTCGAGCTCGACCTCCTCCTCATCCGCCATGGGCGACGACATCGACGCGAGGTACGAGGTCCCCCGCACGGCGGAGTTCATCCGCGCCCGCGCCTACACCAGGGTCGCGCTCCAGTTCCCGGACGAGATGCTCAGGGACGCGGCGGCGGTGGCGCAGGCGCTGCGGCGGGAGCTAGGCGGCGGTGGGGTAAAGCTGTTCGTGATGGCCGACACGGCGTACAACTCGTGCTGCGTCGACGAGGTGGGCGCGTCCCACATCGATGCCCAGTGCGTCGTCCACTACGGCCACGCCTGCATGAGCCCAACATCCAATTTGCCTGCTTTCTTCGTGTTTGGGAAAACACCATTGGATACCGATGCTTGTGGCCGCTCATTGTTGGAGTGCTCGAGAGAAAGTGATAAACGCATCCTGGTTTTTTATGGATTAGAGTATGCACATGCATTGGATGATCTTAAAGCAGTAGTTGCGGAATTATACAAATCACATTCTCGCAGTGTTGAAGTTCAGTATGCAGATGTTCTCTGTTCAGTTATGAGCCCAAGCTCTGCTGCAGAAGTGGAACACGGTCAATCCGATGGAAGCACTCATAGTGATGATTTATCTATACAAAGTGATGTAGCGACATTTGTGAATAATTGTTGCAACGTGGAAGGATCCACACGCAAGTATAGCCTTGGAGGACTAACATGGTCTACATCCATAGATGATAATATGGAGGACTATTTGTTATATTGGATAGGACAAGATAACTCAGCATTTGCCAACATTGTGCTTACCTTCAATAAATGTGATATAGTTAGGTATGATACAGTAGCAAAT | |||||||||
gi|33659659|gb|CF282272.1|CF282272 14ETL--09-L08.g1 Rice etiolated leaf plasmid cDNA library (14ETL) Oryza sativa Japonica Group GAGCTCGAGCTCGAGCCGAAC EST sequence (targeted fragment marked with yellow): TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGGGAAAAATGGCCCCCAGTTTATTTGGAATTCACGTATCGCAAACATGCTGGTGGGGTTCTTACGGAAAACCCTTCGTGTTTCAAACAAGTACCACGCTTAAATGAAAAAATTTCGCTTTTAGGGGGAGCGCTGGAAACATAAAAAATACCAATTTTTTTTTTTTCGAAAAACAGCCCCATAAATTTGCTTATCCAAACCCTTTTCGGGCGGCTCCCACCTTGCCCACACTTTGCCGGGGGTCCACATTTTCTTTTCCCCCACAGTGGGGGGGCCTGCCTCCCCCCATTCGGGGGGCTCGAGCTTGAGCTCCTCTTCCTTTTTTTTCCTCCGAAGGGTGGGGGGCTTACCTTTTCCCCCA | |||||||||
gi|66913183|gb|CX100031.1|CX100031 RECm0827 A normalized whole-life-cycle cDNA library of rice Oryza sativa Indica Group cDNA cl GAGCTCGAGCTCGAGCCGAAC EST sequence (targeted fragment marked with yellow): CCCACGCGTCCGGTTCAAGCTCGAGATCCCCGACCAGGAGGCCGACAAGATCGACTCCCTCCCGCTCGCCATCGAGTACGTCGCCAACCACCCCATGGCCGCCTGACCTCACCGATCCGTCGTGCCGTGGTGAGGCTTTTCTTGATTTACTATTTTTGTTCTGCGGGGGATGAATAATTTTGCTGGAGTGGTTCAGGAAAACTTGTCCCTGGTACTCTAGATTATGTGTTATGTTGCCATCGATGTCGATCTCTAATGTAACATCCACAATTTCGGTTTTGTGACAA | |||||||||
gi|88576576|gb|CI670721.1|CI670721 CI670721 Oryza sativa (japonica cultivar-group) callus UVB iradiated callus, immid after trea GAGCTCGAGCTCGAGCCGAAC EST sequence (targeted fragment marked with yellow): TGGGTGCCGGTGCGTCGCCTCACCCTCCTCGCGCCGCCTCTCCCCGCCCCACCAATGCCCTGCAGCGCCGCTCCATCCTCCGACGCCTGTCCTGGCCCCGACACCGCCGTGCGTCGCCGCATGTCCTCCACTGCCTCTCTCTCTCTCTCCTTTCTGCCGGTGCCGCTGAGCTCGAGCTCGAGCTCAATGGTGAGAGGCTCAGTACGTCGACAACGAGTCGGTCGATCCAACATTCAATCGGGTTAGGTCTTCGTCGTTCTCACTACCTCGTCGTCGATTTACCTGTCTCCTCAATACAAGCCCCACGCTGCCTTCCGATTTGGTGGCAGCTGCCGTGCAGCGATCGGATCTGGCGAAGGGAGGAGGAGCGCACGGCGGTGTCGACTTGAAGTAGGTTGCTGGCGGCGTCCCCAG | |||||||||
gi|29617951|gb|CB622963.1|CB622963 OSIIEa10F14.r OSIIEa Oryza sativa Indica Group cDNA clone OSIIEa10F14 3', mRNA sequence GAGCTCGAGCTCGAGCCGAAC EST sequence (targeted fragment marked with yellow): CGAGACGGGCCACGTGGGGAAGTTCGTGAACCGGGCGGAGGTGAAGGCGGCACTGGGCGCACGCACTGACGTGGAGTGGGAGGACTGCAGCGACACGGTGGGCGCGGCGATGCACGGGGACGTGATGAAGAGCGTGAAGCCGGGGGTGGAGGCGCTGCTGCGGGGAACGCGCGTGCTGCTGTACCAGGGCATCCGCGACCTCAGGGACAGCGTGGTGTCGACGGAGGCGTGGATGCGGGAGCTCAAGTGGGACGGCCTGACCGCCTTCCTCGTCGCCGACGCCGGGTACGTGCAGCGCTCCGGCCCGCTCTCCCACGTCGTTGTCTACGGCGCCGGGCACCTCGTGCCGGCGGACAACGGCCGCGTGGCGCAGGAGATGATCGAGGATTGGGTGTTGCAGGCGGGGCTATTCGGGCGCCACGGCGGCATGAAGCGCGCGGCTTGACTCCGCACTCCGGGGCACGGGCGGAGGCCTCATCTCTCGCGGTGTCAAACTCTAATCTGATTTGAGAATCGAGCAGAGTATGAGCCAGTTTGGTACAGCTTCAACTCCTCAATTTAACTCCAGGAGTTAGATCTGGAGTGGAGTTGTGAAGCTGCATAAACCCAGCATCACAACTTCATTTTGTGAGAGAGCTCCACCCAACTCTACTCCCAGTTTTGGTGGAGCTGAAACTGTTTGGCTGAGCTCCAGCTCCAGGAGGGGTGGAGCTGGAGCTGTGCCAAACATGCCCTACATTGAAGGATACAATTCCGGGGAAATACAAGCATTCGAGTCTTTTTAGG | |||||||||
gi|29634183|gb|CB639192.1|CB639192 OSJNEa08L08.r OSJNEa Oryza sativa Japonica Group cDNA clone OSJNEa08L08 3', mRNA sequence GAGCTCGAGCTCGAGCCGAAC EST sequence (targeted fragment marked with yellow): GCCCAAGCTCGAGCTCGACACAAGCTCGAGCCAAACACAATTGCACCTTCGAGCTTTTAGGCAAGTTCGGCTCGAGCTCGAGCTCGGTGCCGAGCTCGGCCATAAGTAGTATAATATATATTTTAATAATAATCTCTTGATAAGTATAATTTTTTCTAGTAATCACACTAATAAAAGAGTAGAAAATGATTAAAAT | |||||||||
gi|88695794|gb|CI737371.1|CI737371 CI737371 Oryza sativa (japonica cultivar-group) 1 day after pollination pistil Oryza sativa J GAGCTCGAGCTCGAGCCGAAC EST sequence (targeted fragment marked with yellow): GGAATCTTTCTTTTCCTTTCCCCTTTTCGTTTCTGTTTTTTTGAGATTTTTATTTAAATTTCGTTTCAGTTTCGTTTGAGTTCGAGTTCGAGTTCGATTCGATTCGATTCGATTTCGTTTTCTCTCAGGAAGGAACACGAGCGGTTGGGTTCATCCCCCTCCTCGCCGTGTTCTTCGCTCCGCCGCCGGGCGCCGCCGGATCGGTCGCCCCACCCCCCCCCCGCCCCCTCCCTCCCNAANNTTNTCCA | |||||||||
gi|117229510|gb|CT859852.1|CT859852 CT859852 Oryza sativa (indica cultivar-group) cv. Guang Lu Ai 4 Oryza sativa Indica Group cD GAGCTCGAGCTCGAGCCGAAC EST sequence (targeted fragment marked with yellow): GAAGGGAAGGTGAAGGACTCGGTGCGCCGCAGCGTCAAGTGGATCAAGGGCAAGTGCTCCCGCGCCGTCGACGGCAAGTGGTGATCTCTCCCTCTCCCCCTCTCTCTCGCCATCGCCATCGCCATGGCTCGAGCTCGAGCTCGAGCTAGCTCCTCTTCGTCGTCATCTTTCTTGCTCTTGGGTGTGTTTGAGTCACCGTTGATTGCTACCTTCCTCCTACCTGCACTGCACACCTTCATTCGATTTGTTACTCCTTCTTGTTTTCTTCTTGGATATTAGGATTTTAATTTTGACGAGATTTGGTCTGCATATAGCTACTGCAGCCATGTAGTTACTACTACTACTTAGTATAATTCAGTATGAGGAGATACATATGAGCAGTGGTAAGCTTTTGCCTTGGTGTTTTGCTGCAGAGCAAAAAATCCAAGGAAAAGTTGATCAGTGTGTGGTGTGCTTGTTGTTGTACATACTTGTATGAGTATTATTATATCTCTGTACCCAGTTTACTGTAGTAGAATAAGATTTTGGAGGTGTGAGATGTAAATAAAATACATATATACTACACATATATAT | |||||||||
gi|33671061|gb|CF299300.1|CF299300 7LEAF--03-E07.g1 Rice leaf plasmid cDNA library II (7LEAF) Oryza sativa Japonica Group cDNA c GAGCTCGAGCTCGAGCCGAAC EST sequence (targeted fragment marked with yellow): CATGCGTGCAAATCAGATGGAGCACAAATTTACATGTTACACCCACACCCTACACCCATGCATAATAATACATCGTATATACGTACGTACATACATACCCCTCTCGATCACACGCACCATCGATCGTACAAAGTTGCGTACATACATACGTACACACATATACGCATACGCACGTACATACATACATAATTAAAAACTCGGAATTAATTAAATACGTAGGTGATGGCATCTGTAATGGAACTTGAGGCTGGTGAGGATGTTGTTGTGGACGGGATCAGCGAGGTGATCAAGCAGGTTGTGCACGGGGCCAACCCCAGTGAAGAGCGCCTGGACGGATAAACCGAGGAAGGCGAGCATGGCGAGCCTGCCATTCTTGATCTGCTTGAGCTTGAGCTCCT | |||||||||
gi|88729918|gb|CI753139.1|CI753139 CI753139 Oryza sativa (japonica cultivar-group) library (Kikuchi S) Oryza sativa Japonica Gro GAGCTCGAGCTC-GAGCCGAAC EST sequence (targeted fragment marked with yellow): GAAAGGAGAGAGAGAAAGGGGAACACAGGAGGACACACTGCAGAGAGAGAGAAAGGGTCAGTCGGAATGGCGGAGGCGGCGAGCTCGAGCTCGGGCACGTAGCTCTCACGCCGCTCGCCGTCGTCGCTTTCCCCGGCGAGGCCGCCCGCGCCGGCCGTCGCAGCCGCCTCTTCTCCGGAGGCCGCCACCGCCTCCCCGCGCGGGGGCTCCGGGGTCACCCGTCTCGCCCCCCCCCTCTCCCGCTAGGGTTTTCTCGGATCCCGAATCGCCGTAAGCCACCACCCACCACGACGAGTTCTCTGGTTGTTTGGCTTGGAGCTCGAGCTCANGGGAACGCTGCTTTGGTCGGATTTGGGGATCGTGCACCTCTTTCCTATCTGGTAC | |||||||||
gi|117239031|gb|CT855136.1|CT855136 CT855136 Oryza sativa (indica cultivar-group) cv. Guang Lu Ai 4 Oryza sativa Indica Group cD GAGCTCGAGCTCGAGCCGAAC EST sequence (targeted fragment marked with yellow): ACTAATTAATATTTTTAATAATATACGAATGTCTAGACACCGGTAGTAGTTGTAAAACCCGCCCCACAAACAAATAAAACGAACAAAAAATATCCTAATCAAAAACAGCAAAAGCGATGAATCTCATCGGCTGCACCATGACGTCACGGCCACCTCTCGCCACCGCGCTCCTACTCATCCTAGCCGTGATGAGCTCACTGCCACGCGCGTCTCAGTCGTCGTCGTCGGCGGCGGCGTCGAACGAGAAGCAGCTCAAGAACTTGATCAAGACGTCGCGGCCCAACTTCAAAGTCAAGTGCCAAGACCTGCTCAAGGACTTCCACCCGCACGTGGAGAAGCGCACGTTCCTGGTGACACGCGACCAGACGAGTCTGATCTCGCGACACGCCAAGAATAGTACGTTCGAGCGCTTGTCCAACCAGTGTCCGTCGACGATCGAGGCGAACGCCAACCGGCTCGAGCTCGTCTGGCGCTACCAGTTCTTCGAGTCGACCCATTGCATTCGGGTCGAGCTCGATCTCGGCAATTTGACCCTCTTCCATCAGCGCTTGACTACAAGTACTACATGTTCAGCTACCGCGAGTTCGGCTCCAAGAACATCCACCTGAAGCGGCAGCTCATCGAGGAGCAGTCGAACAGCTTGACCATCAATCGCGCCTACATTCGCCCTACATCGTGTGCGTGTCGTCTTTCAGCGCGACTTCTCCATGGTTCGAACTCGTCCGGGAGTGGGGACAACGCGAGCAGTAATAATCAGTCGATCGCCGATTGTCGAAGCTTTAGCCAAGAGCTGTTCGACGATCAAAAGCTGAGAATGTCGATCTGGGCATCGACATCGACACGCCTACCCTTTCCTTGTAAATACTGGTACCTTTTGGTGTTTTTTTTTTTTTAAATCTAATGCTCTTTTTGTTCTTTAAAATAGGAGTTTTTAAATTTTCAAATTTTATTTTATTCATATTTTTAATAGAAAACAGGTTTTTGTTTATTTTTGTTTTTTTTTAAAATAAAAAAATAAAAAAGGGAAAAACTGGTTTTTTCCCCCCCCTTCTTTTTTTATCCTTTGATTTTAAAAAAAAAAAAAGGGGGGGAAAAAAATTTTTCCCCCAAAAATATTTTTTTTTAA | |||||||||
gi|88538873|gb|CI467934.1|CI467934 CI467934 Oryza sativa (japonica cultivar-group) 25 days after pollination pistil Oryza sativa GAGCTCGAGCTCGAGCCGAAC EST sequence (targeted fragment marked with yellow): AGGTAAGATGATTTTATTTAGATTTATATGACCCTAAGTTTCAACAGTCACACATGATGATGTATGACTTTATTTTTAACATACGAACTATTATATTGTTACAATTCAGTACCAGACACCACCAACAGTGGCAATGCTCCTGGGAGCACTATAGTAGTTAGGGTAGATACCACATATGGATGGCAAGTTGAAGGTCAACAGAGTTTGGGCTTGAGCTTGAGCTCTGATCAAAGTAGACACCACTAAATTGCTGCAGTTGTAGCTGTTGCACAATCGCTTGAACAATACTAATGGCCTGGTACTGAGATTGTTGTGCTACCAGCCTGAGCTGTTGGCAACACTGCTGCTGCATGACTTGGTTGTTTATNAATTGAAACGTACCTGGTTGCCAGAAGGGGG | |||||||||
gi|88981498|gb|CI027116.1|CI027116 CI027116 Oryza sativa (japonica cultivar-group) etiolated shoot Oryza sativa Japonica Group c GAGCTCGAGCTCGAGCCGAAC EST sequence (targeted fragment marked with yellow): TTTTTTTTNTTTTTTTTTTTTTTTTTTGGAAAGAAAATAACTAATTAGTTTTGCTGTTTGCTATCTACTATCTTCGTTGATGTTACATAGCCATTGCTTTTTCTCACTGAGATAGTGGATCATTGTTGCCGTTGCAGTGGCTTGTTGGTTCGGCTCAGCTAAACTCCATTGCTTCTGCGGTCTTGCATAGCCTGCAGCACAGTGTTTAAACACTTAATAAAAAGAGCATTGATTCTAACACCCGCAGAACCACCCGTTTGGTTGTGCGAACGTGTTCCACTGACAGGAAGCGGCACGGCCGCACTGGCTATTGAAACGACTGCAATCGTCGCCTGCACCATTGCATCTAGCGTTGGCTTGAGCTTGGGCTCCTGAAATAGAAATAGTGAGCGCTAAGAGGGCGGTGCCGATTTTAAAGTTCAGCATAGCGACTTATAGTGATAGAGATTTTGTAACGGAATTTGATTTATCTTAGAAAAGGCGGCGATTCTTCTCTACAGCTCCAGTAGGCCAACAGTGCTCGAGGAATTCCGCAGCTTTTAGAGCAG | |||||||||
gi|29687573|gb|CB683848.1|CB683848 OSJNEf12M20.f OSJNEf Oryza sativa Japonica Group cDNA clone OSJNEf12M20 5', mRNA sequence GAGCTCGAGCTCGAGCCGAAC EST sequence (targeted fragment marked with yellow): GAATTTCGAAGCTTATCCGAAGATGCCAATGGAGAGGTCGGTGTCGTGCGCCGAGAGGCCACCGGCGGCGTTCGGCGGCGGCGCGGCCGCGGACCTGCGGTGCTACAGCGCGTCGTACGCCACGTCGTACAAGCCGGGCGCTGGCGCGGCAGCGGGGGCGGCGGCGGGGGCGGGGACGAACACGACGACGAAGGTGATGAAGCGCGCCACGAGCGCCAACGCGTGGTCGCGGCCGGGCGGCGGTGGCGGCGTGCAGCGGAGCGGGAGCACCAAGACGGTGGCGTCCTCCGCCGCCGGGTGGGGCCGCGGCGGCGGCGGGCCGACGCCCGGGTTCAACCTGCGGAGCTACAGCGCGTCGTACGCCGCGTCGTACTCGCCGTTCGAGGACCCGAGTCCGGCGGAGAAGACCGGCGGCGGGGGCGGTGGCGCGGCGACGTGGGCGTCGTCGGCGGGGCGGCGGTCGGTGAACCTGATAGGGTACACGCCGTCGTTCGCGGCATTGGACGACACCGCCGTGGCGCCGCCGATCCCGGCCAAGAAGCATGTGTCGCCGACGGGCAGCTTCGCCGGCGCCGTCGTCGACGACGCCGAGCTCCAGCGGCGGAAGCGGCTGGTCGCCTACAAGGCGTACGACGTGGAAGGGAAGGTGAATGACTCGGTGCGCCGCAGCGTCAAGTGGATCAAGGGCAAGTGCTCCCGCGCCGTCGACGGCAAGTGGTGATCTCTCCCTCTCACCCTCTCTCTCGCCATCGCCATCGCCATGGCTCGAGCTCGAGCTCGAGCTAGCTCCTCTTCGTCG | |||||||||
gi|29637461|gb|CB642470.1|CB642470 OSJNEb02K17.r OSJNEb Oryza sativa Japonica Group cDNA clone OSJNEb02K17 3', mRNA sequence GAGCTCGAGCTCGAGCCGAAC EST sequence (targeted fragment marked with yellow): CCGGCCAAGAAGCAGGTGTCGCCGACGGGCAGCTTCGCCGGCGCCGTTGTTGACGACGCCGAGCTCCAGCGGCGGAAGCGGCTGGTCGCCTACAAGGCGTACGACGTGGAAGGGAAGGTGAAGGACTCGGTGCGCCGCAGCGTCAAGTGGATCAAGGGCAAGTGCTCCCGCGCCGTCGACGGCAAGTGGTGATCTTTCCCTCTCACCCTCTCTTTCGCCATCGCCATCGCCATGGCTCGAGCTCGAGCTCGAGCTAGCTCCTCTTCGTCGTCATCTTTCTTGCTCTTGGGTGTGTTTGAGTCACCGTTGATTGCTACCTTCCTCCTACCTGCACTGCACACCTTCATTCGATTTGTTACTCCTTCTTGTTTTCTTCTTGGATATTAGGATTTTAATTTTGACGAGATTTGGTCTGCATATAGCTACTGCAGCCATGTAGTTACTACTACTACTTAGTATAATTCAGTATGAGGAGATACATATGAGCAGTGGTAAGCTTTTGCCTTGGTGTTTTGCTGCAGAGCAAAAAATCCAAGGAAAAGTTGATCAGTGTGTGGTGTGCTTGTTGTTGTACATACTTGTAGGAGTATTATTATATCTCGGTACCCAGTTTGCTGTAGTAGAATAAGATTTTGGAGGT | |||||||||
gi|66923771|gb|CX110619.1|CX110619 EI050N17 A normalized whole-life-cycle cDNA library of rice Oryza sativa Indica Group cDNA cl GAGCTCGAGCTCGAGC-CGAAC EST sequence (targeted fragment marked with yellow): TTGTTCTTAAATTCGAGTATAATCTCCACCTCAGTTCTTACAAATTTTACCCCCAAAACACTTTTATCCCACTCACAAAAACTTGTACATGAACAAGTCAAAATACTCCATACAACAAGAATCATCCATCCGGTCATCCCTCTTGCAAAATGCAGAGACACAGAGAAGTAGCAGCAGCAGCTCGAGCTCGAGCTCGAGCTCATCAGCACGAGACCCCGCATGGCTTGAGGACGGGGCCCTTGGGCTTGGGGATGAAGGGGTCGATCCTGACC | |||||||||
gi|58591888|gb|CF990196.1|CF990196 21440rsicee_4907.y1 Oryza sativa cv. LYP9 tillering whole plant cDNA library Oryza sativa Ind GAGCTCGAGCTCGAGCCGAAC EST sequence (targeted fragment marked with yellow): GGGCTGAGGAATTCGGCACGAGCTCGATCTCCCCATTTCTCTCTCCCGTGTGGTCGGAGCTCACTGCGGCGGCGGCGGGGCGGGAACGAGGGGGGAGAGAGAGAGGTCGAGGTAGAGAGGAAAGGGAGAGGAGGGCGGAGGAAGATGAGCGGGAACGGCGTGAAGAAGGTGGCGGAGGTGGCCGCGAAGGCCGGGAAGGCGATCGACTGGGAGGGGATGGCCAAGAGGGTCGTCTCCGACGAGGCGCGCAAGGAGTTCAACACCCTCCGCCGCACCTTCGAGGACGTCAACCACCAGCTCCAGACCAAGTTCTCTCAGGAGCCCCAACCGATTGACTGGGAGTACTACAGAAAAGGAATTGGGTCTAAAGTTGTAGATATGTACAAGGAAGCTTATGAAAGCATTGAAATCCCCAAGTACGTTGACACCGTGACTCCTCAGTACAAGCCAAAGTTTGATGCGCTGCTTGTTGAGCTGAAAGAAGCAGAAAAGGAGTCTCTGAAGGAGTCAGAGAGGATAGAGAAGGAGCTTGCTGAA | |||||||||
gi|117223764|gb|CT847285.1|CT847285 CT847285 Oryza sativa (indica cultivar-group) cv. Guang Lu Ai 4 Oryza sativa Indica Group cD GAGCTCGAGCTCGAGCCGAAC EST sequence (targeted fragment marked with yellow): GATTTGAACAAAAATAGGGAGAAGAAAAACAAGATTTCTTTTTATGTGGATTCTGACTATTTATCAAAACGTTTAGTTAAATACGAAAGTTAGCCAAGCAATACTTTCCAAACATGGTTTCGGAATATCGCAAGCAGTTTCAAGCGAGTTTGGACGCGCTCTACGCCAAAGAGATCCAGGACATCTACGCTCACTACATGGACCCGAGCGTGAGCGCGAGCGAAAAGTCGAGCCGGCTGGGAGCCGAGCTACCGCGATTCTGCAACAAAATCGACGTGCTCAAGCTGACTTCGGCGCCGCTCGCCATCACCATTCTCAACGTCGTGAACGGCTTGAGCTCGAGCACTCGCGACAATCTCGACATGGAGGTCATACAGACCATTCGCAAGATCACCACCGATTTGTACAACTCGTACAAGCATTCGATCATGGCCGACGATTTTGTTAACAAAGAAGAGCTCATGACCGACGAAGAGGACCTCGATCGAATACTCTATCTTTGCTTTGAAACGCGTTTTAACATCGCTCACGACGGAATCAAGCTACGCAAGTCACGTGAGATATTCAACCTGGGCGTGACTCTTCTAGCGCGCATCCTCGGCGGTCTGAACAAGAACGGCAAACACGAGCTGCTCGTCAAGTACGAGGCGCGCTACGATCAGCTCGAAAATTCCATTGTCGACTCGGGCGTCGAAGTCGAAAAGCTGAAAGAGTGTCTTCGGTTGTTGAAGAAGCGCTTCATGAGCACCAATAGGATTGAGCAGTCGGCTATCGAAAAAGAGCTGATTGAGCTTAAATTTAACTTTTATTAAACTTTTGTTTTATTTGTAGATTGTCCGGGCGCTCATTTTATGGTTGCAATATACATATTCTAATTTCTGTTTTTAACCCTCTTTTTAATTCAATACTCCTTTTGAATGGGGAGTAGTAAAAATAGGGGGATTCTTTATATTTTTCATTAAAATTTTTTAAAGACATTTGGTTTGGACTGGTTATAATTTTTTTCCTTTTAATTTTTGGAGGCCAATTTTGAAAGGAAAGGGTATTCTTAATTCGTTTCTTTATTTTGGAAAAAAATT | |||||||||
gi|29663560|gb|CB659835.1|CB659835 OSJNEd01B22.r OSJNEd Oryza sativa Japonica Group cDNA clone OSJNEd01B22 3', mRNA sequence GAGCTCGAGCTCGAGCCGAAC EST sequence (targeted fragment marked with yellow): GGCGTCGGCGACGCCGACCCGGCGATCAGCGCCGCCTACGCGTTCCTCCTCCGCGCCGTGTGCCCCTCCAACAGCAGCCAGTTCTTCCCCAACACCACGGTGGACATGGACGTGATCACCCCGGCGGCGCTCGACAACAAGTACTACGTCGGGGTCGCCAACAACCTGGGCCTCTTCACGTCGGACCACGCGCTGCTCACCAACGCCACGCTCAGGGCGTCGGTGGACGAGTTCGTCAAGAGCGAGACGCGGTGGAAGAGCAAGTTCGTGAAGGCCATGGTGAAGATGGGCGGCATCGAGGTGAAGACCGGGACGACGCAGGGCGAGGTCAGGCTCAACTGCAGGGTCGTCAACAAGAGGAGCGCCAACGCTGAGCTCGAGCTCGAGCTCGCCGCCGCCATGGATGATGGGGATGAAGTGGCAGCGAGCTAATTAATTAAGGTGGTAGTAGCTGATCTGATGTCGCGTGTTCTTCAGAGGTTTCAGCAATAAGTTTGTGATCGGTGTTGTTACTTGTTAGATCTATGCTGCTGCTGTTTTTAACGAGAATAAGAGTTGCTGGAGTAGGGGTTTTTTTCTTCTTCTTCTTTTTTAATTTCTTTTC | |||||||||
gi|88350937|gb|CI620597.1|CI620597 CI620597 Oryza sativa (japonica cultivar-group) callus Oryza sativa Japonica Group cDNA clone GAGCTCGAGCTCGAGCCGAAC EST sequence (targeted fragment marked with yellow): GACCTCCTCCTCCTCCTCCCTCCTCTCTACCCACCCACCCTCTCGCCGTCGGAGATCCGATCCAGGAAGAGCTCGCCGCCGCCGCTGGAATGGCGCTCTCCGTGGAGAAGACCTCGTCGGGGAGGGAGTACAAGGTGAAGGACTCTCCCAGGGGGACTTCGGCCGGCTCGAGATCGAGCTCGCCGAGGTCGAGATGGCGGGGCTCATGGGGTGCCGCGCCGAGTTCGGCCCCTCCCAGCCGTTCAAGGGCGCCCGGATCTCCGGGTCCCTCCACATGACCATCCAGACCGCCGTCTCATCGAGACCCTCACCGGCCTTGGCGCCGAGGTCCGCTGGTGCTCCTGCAACATCTTCTCCAGGCAGGACCAGGCCGCCGCCGCGATCGCAGGGA | |||||||||