| mature miRNA: GCCGAGACGAATCTTTTGACC species: Oryza sativa database: miRNEST The numbers on the right side of the alignments show a score calculated for them. When calculating the score, a mismatch is given a score of 1, bulge: 2, and wobble: 0.5. |
| Predicted miRNA targets | |||||||||
gi|29680160|gb|CB676435.1|CB676435 OSJNEe12L04.f OSJNEe Oryza sativa Japonica Group cDNA clone OSJNEe12L04 5', mRNA sequence GCCGAGACGAATCTTTTGACC EST sequence (targeted fragment marked with yellow): CTGCATTGTTGTGGATCGAGTAGCTATAGCTAGCTAGTGATGGAGATCTTGGTGAGTGCACTGCTCCTGCTCCTCGTGCCACCCTTGTCCGCCCTCCTCGCCGTCGCCGCGCCGAGCCTCGCGTGGCCGTCGGGGTCGTCGTCGGTGAGGAAGCTGATCGCCAAGAAGGTGGCGCCGGAGCAGGCGGCGCGCGACGAGCTGCTGCGCGTGGCGCGGTACAGTAGCGCTAGCGTCGCCGCTGCCGCTAGTGCTGTCCAACAACCAGGCGGCAGCGAGAGTAGTCGTCCGGCGGCGGCGGCGGCGGATGATGGTGGGCGGCCGGATCAGTGCGCGGTGTGCCTGAGCGGCATCGAGGAGGGCGACGAGGTGAGGGAGCTCCGGTGCCGGCACCTGTTCCACCGTGGCTGCCTCGACCGGTGGTGGTTGTCGGCGCGGCCGCCCGCCACGTGCCCGCTCTGCCGCTGCCGGCTCCTGCAGAGCCCGTCGGCGGCGGCGGACGACGGCGACGGCGACGGCGAGGAGGATTCGGACTCGGACATGGTGATGTTCATGGCGTACCTGCGAAGCAGTAGCACCTGGCTCTAGCCATTAAGGGCGTGTTTAGTTCCAAAAACTTTTCTCAAAAACATCGCATCAAATCTTTAGACACATATATAGGACATTAAATATAGATAAATAAAAAACTAATGGCATAGTTTGCATATAAATCGCGAGACGAATCTTTTGAGTCTAATTAGGCCATGATTAACTATAAGTGCTACAATAACTTACATGTGCTAATGACAGATTGATTAGGCTTAAAAGATTCGTCTCGTGGTTTTAGTTTTTTTATTCGTGACCGAAAATCCCTTTTG | |||||||||
gi|88507094|gb|CI434600.1|CI434600 CI434600 Oryza sativa (japonica cultivar-group) leaf of seedling gamma-irradiated (9.5min), a GCCGAGACGAATCTTTTGACC EST sequence (targeted fragment marked with yellow): GTCCACCTGTAAACCGCGAGACGAATTTATTAAGGCTAATTAATCCGCCATTAACAAATATTTACTGTAGCACCACATTGTCAAATCATGGCGTATTAGGCTCAAAAGATTCGTCTCGCAATTTACATGCAAACTGTGCAACTGGTTTTTTTTCGTCCACATTAATACTCTATGCATGTGTCCAAACATTTGATGTGACGGAATTTNTGAAAGTTCGAAGGGAACTAATCACAGCCATAGATTACATTTACCATGCTGCTAGGATTAATCATGTCATGGTTTTTGCTCTCAACAAATCAGTGATGGTGGTGGATAGCAGTCAAAATTGGGGGATCAGCATAAGGACCATAGAGCCACCCCTTGGCAACGAACCGGTTGATGGCCTCCGTGTAGTGAATCCCATCCCAGGATATTGAG | |||||||||
gi|86259685|gb|CI065558.1|CI065558 CI065558 Oryza sativa (japonica cultivar-group) BAP treated callus Oryza sativa Japonica Grou GCCGAGACGAATCTTTTGACC EST sequence (targeted fragment marked with yellow): CGAACACAAATTAAAAAACTAATTTCATAACTCGCCTGGAAACCGTGAAACGAATCTTTTGAGACTAATTAATCCACCATTAGCACATGTGGGTTACTGTAGCACTTATGGCTAATCATGGACTAATTAGGCTCAAAAGATTCGTCTCGTGATTTCCATCATAACTGTCCAATTAGTTTTTTTTATCTATATTTAATGCTCCATACATGTCTACAAGGATTCGATGTGATTTTTTTGAGAAAAACTTTTTGGGAACTAAACATGCCCTAAATGTTCAGTTTACTGTGAACAGGAACGCGAAAACGACCGCTACACTTCAACAACGTCAACCTCCGACAACTCAACGCTGGAGACACCATCGGGGCAGAGGATCGACAGCACGCTGACCGTCTTGTGCTGTGGAATCTGACTTATCTTGAGCCGATCTTCATCGCTCAATTGCCAATCGAAGATATCGATGTTCTCCTTAAGCCTCTCCCTTTTCGTACTCGTGGTCACCATGCTTGCTCCTTGCTCGTAGATCCACCTAAGTGAGATCTGAGCC | |||||||||
gi|40488074|gb|BX898703.1|BX898703 BX898703 Oryza sativa library (Han B) Oryza sativa cDNA clone y745h12p3, mRNA sequence GCCGAGACGAATCTTTTGACC EST sequence (targeted fragment marked with yellow): TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTCGTAAATCATGGAACAATTTGGTTTAAAAGATTCGTCTCGTAATTTACACACAAACTATGTAATTAGTTTTTTTCGTCTAATATTTAATACTTCGTACATGTCTTTAAAAAAAATTATCGGTGCATCTAAACACCCCCCCCAAAAAAAAAAAAAACAGGCCAACATACCATGCCATGACAATGCGGAATGCATCAGCCTCTGCCTGCACCAGGCATTTCTGCTCTGTGACTCTGTCCGAGTGAAGAAGACGACGACGACGACGACGACGCTTAAAAGCAAGTGACACATCTGCTGGCTAGATGCCGCTACATTTTACTGTTGCGGTTGGTGTTGGTGCCCGTGGTGGGCCCCATCTCCTTGGAGATATTCCGGAGCACGTACTTCTGGATCTTTCCGGTGGACGTCTTCGGTAACTCGTCGCGGAAGATCACCGTCTTTGGGACCATGTACCGCGGAATGAGCTCCCGGNTCCACGCGAACACGTTCGCCGCCCGTAACAGAGGCCCCACACCTGGTTGAAGCTTAACAAAGCGACAGGAGTTTTCCCCCAGAATCTTCCGGCCGCGACACAACGACGACTTGTTACCGCCGAGTGGGCGAATGACGGGATCACAATCACACGTTATTTTTTCCCCAGGAAAAGACG | |||||||||
gi|89189969|gb|CI013536.1|CI013536 CI013536 Oryza sativa (japonica cultivar-group) etiolated shoot Oryza sativa Japonica Group c GCCGAGACGAATCTTTTGACC EST sequence (targeted fragment marked with yellow): TGGCAGCTTGAAAAATCTCAAGGTTCATCCGAGTTATTCAGCACACAGGAGTACACGAGTATACGACACGATTACACCAATACATGCAAACCAAATTGCATGTTGTTCCAAAAATCCAAACGGAAACCAACAAGATTACAAGAAGCACACTCTCACATCATCATATCGATCTCTCCACACAACGAGGTTAACTATACCTGAGTGAAAATCTCGCATTCATCGTCGCATGCCCGCCGCAGCGTTGCCGCTTGCTAGAATGGACGGTTAAAAAGGTTCGTCTTGGCTAATAGCTTCGACAAAGTTCAGCTGCTGCTCCTACTCGGAGTAGTCTTGTAACTGTAAGCTGGAGCCGGGCTCCCGGCGAGGTTGCTGCTGCACTTGCGCCACTGCCACGAGTCGGCCGGCGTGCTGGGCAGCGGCGGCAGCGGCAGGACGGCGGGGCCGGGGAGGCGGCACAGCCCGAACGGCCACCCCTCGCAGTCACGGAGCCCCTCCCACTTCGCCGGCGACAGC | |||||||||
gi|117237467|gb|CT855059.1|CT855059 CT855059 Oryza sativa (indica cultivar-group) cv. Guang Lu Ai 4 Oryza sativa Indica Group cD GCCGAGACGAATCTTTTGACC EST sequence (targeted fragment marked with yellow): GATTTTCTATCTCTCTCACCACCCGTATATATGTAAAAATTGCCAATTCGTAATAATAATAAATAATAATCAAACCAAACAACAACTCAAAAAAATTGGTGTTGTATAAACATACACGAAAAAAATTAGCACCGCCTATTAATATATAAGAGCCAAAATCCTAACCCGACCAAATCCCGTTATTGTTATCATATATCATATCAAACTAAAAAAAGAAAAAAAAAAAAAACAAACCCTAATTTAGGCTTAGAAACGAAGAGATTACTCTACTAGACAACTAAAATGGACACGGGCGACGAGCTGCGATTGCGCGAGATTCAGCGCGAGTATCTCGACTTCCTCGACGACGACCAAGACCAAGGCTTCTACAGCAGCAAAGTGAAAGACATGATCAACGAGAACCGGCACCGTCTGGTGGTGAACATCAACGACTTGCGGCGCAAGAAGCCCGCACGAGCGCGCGCCATGCTGGACAACTCGTTCGAGGAGTTGACGTGCTTCCAGCGCGCGCTCAAAGAGTTCGTCTCGGCCGTGGACGCCACGTACTCGAAGAACTTCGACGAGTTCTACGTCGGCTTCGACGGCTCGTTCGGCGCCGCGCACGTCTCGCCGCGCACGCTCATCTCGTCGTTCATCGGCACCATGGTGTGCGTCGAGGGCATAGTCACCAAGTGCTCGCTCATTTGTCCCAAGGTCGTGCGCTCCGTGCACTACTGTCCGGCCACCAAGAAGACCACCGAGCGACGCTACACCGACATGACCTCGCTCGATCCGTTTCCTCCTCGGCCGTCTATCCCACCAAGACAACGACGGCAATCTGCTCGAGACCGAGGTCGGCCTCTTCAAATACAAGGATCACCAAACGTTCAGCGTGCAAAAGATGCCGGGAGAAGGCGCCAGCCGGTCAACTGCCCGCGTTCGTTCGACGTCATCGGGGAACAACCAATCTGGTCCAATTTGGCAAACCCGGGGCGAATCCCTTTCCGTATTGGGGGGCACTTATTCGTTTGTTTGCCCTTCCAAAAACAACCGAATTCACCAACCCCACATTTTAGGAAACGGTTCTTATTCCCCAACAACCTGCCCAATCCCTAAAAAAAAAAGTGGCATTTTTTTTTTAACACCCGCAGAGACGTAAAAAAAAATAAAAAAAATTTCCCCCCCCAAAAAAAAAAAGGAGACCGTTTTCCAAAAACCTTTGGCGTGTTTTTCTCCCCCCCCCTCTTACCCCGCACCCCAATTTTTTCAAAAAAAAAAGACATTTTTTTGTTTTTTCTTTTTTTTCGGGGCGGTTTAAAAAAAAAAATTTCTTTCCCCCCCCGCCCCACCCCCCCTTCTTCTCCCTGCAGGAGAGAAAAAAATCA | |||||||||
gi|89163282|gb|CI100172.1|CI100172 CI100172 Oryza sativa (japonica cultivar-group) Panicles one day after flowering Oryza sativa GCCGAGACGAATCTTTTGACC EST sequence (targeted fragment marked with yellow): TTAGGTTTAAAAGATTCGTCTCGCAATTTATACACAAACTGTGTAATTAGTTTTTTTCGTCTAATATTTAATACTTCGTACATGCCTTAAAAAAAATTTATCGGTGGATCTAAACACCCCCCCCCCCCCTTCCCCCAATCAAACAGGCCATGGCTGGTGGTGCTGATATATCGACAGAAACATGCCATGCCATGACAATGCGGAATGCATCAGCCTCTGCCTGCACCAGACATTTCTGCTCTGTGACTCTGTCCGAGTGAAGAAGACGACGACGACGCTCAAAAGCAAGTGCCACATCTGCTGGCTAGATGCCGCTACATTTTACTGTTGCGTTTGGTGTTGGTGCCCGTGGTGGGCCCCATCTCCTTGGCGATATTCCGGAGCACGTACTTCTGGATCTTCCCGGTGGACGTCTTCGGTAACTCGTCGCGGAAGATCACCGTCTTTGGGACCATGTACCGCGGCATGCGCTCCCGGCTCCACGCGACCACGTCCGCCGC | |||||||||
gi|117250727|gb|CT857203.1|CT857203 CT857203 Oryza sativa (indica cultivar-group) cv. Guang Lu Ai 4 Oryza sativa Indica Group cD GCCGAGACGAATCTTTTGACC EST sequence (targeted fragment marked with yellow): ATTCTACACGTACCTTGAAAAGGGGCAGCCTTTCTCTCTCTCGCGCGCGCGCGTTCTTCCTCTCCCCTTTCTTCTTCGAATTTCAGATTAGTTGGTGATGGCGCCGCAGAAGGTGATCTTGAAGGTTTCTTCTATGAGTGATACGAAAATGAAGCAGAAAGCAATGGAAACTGTTGCAGATATCTATGGTATCGACTCCATAGCCGCCGATCATAAAGATCAAAAGATGACTGTAATAGGTGAAGTTGACACCGTCAAGATCGCCAAGAAGTTGAAGAAATTCGGGAAGGTCGATATCATATCGGTTGGGCCCGCCAAAGAAGAGAAGAAGGATGATAAGAAAGGGGACAAAAAGTGATCAGACTTCTTTAGTTTCAGGCCTTCAGATGAATATACTGTGTTCTTCTGATGGCGTGTACACTTGGGCTATGTATAAATTGAGGAGGGGGTTAGATTCAAGGGTGTAAAGTTTTGGCATGTCGCATCGGATATTATATAGGGTGTCATATGGTGTGTTCAGACACTAATAAAAAACTAATTACAGAATCCGTCAGTAAACCACGAGATAAATTTATTAAGCCTAATTAATCTGTCATTAGTAAATGTTTACGGTAGCACCATATTGTCAAATCATGGAGCAATTAGGCTTAAAAGATTCGTCTCGCAAATTAGTCGTAATCTGTACAATTAAGTTTTTTTTAGCCTATATTTAATACTTCAAAAAAAAAAAAAAAAAAGGCCAGCTTTGGCCTCCAGGGGGGGGCCCGGGTACCCAATTCCGCCCTATAGTGGAGTCCTATTGCGCGCCGCTCACGGGGGCGTCGGTTTTAAAAAGGTCCGTGGACGGGAAAAAACCCTGGGCGTTTACCCCAACTTTAAATCCCCCTTGCCAGCAACATTCCCCCTTTTCCCCCGACTGGGGGGTAATAACCAAAAAAAGGCCCCCAACCCAATCTGCCCCTTCCCAGAACAATTTCGCCCAACGCCCGGGAATGGGGCAAAAGGGGAAAACGGCACCCCAGGTAAGAGGGCGACCACTTTAAAGCGCGAGGCCGCGGGGGGGGGGGGGGGGGAAAACGAGCCGGAGAAAAGAGGGGGTACAAAAAAAAAGAAACTTTTGTGTAGGGGGGGAGAACCATTTAAAAACGGCCGCACGCGCCATCACTTTTATTATGTGTATCTTTTTTGTTTCTTTTTTCGCGGCATACCTATTCTGCCTTGTTTTTATATATGACGGATGCA | |||||||||
gi|86506188|gb|CI148821.1|CI148821 CI148821 Oryza sativa (japonica cultivar-group) Panicles mixture of one, two, three weeks aft GCCGAGACGAATCTTTTGACC EST sequence (targeted fragment marked with yellow): TTTTTTTTTTGGTTTAAAAGATTCGTCTCGCAATTTATACACAAACTGTGTAACTAGTTTTTTTCGTCTAATATTTAATACTTCGTACATGCCTTAAAAAAAATTTATCGGTGGATCTAAACACCCCCCCCCCCCCTTCCCCCAATCAAACAGGCCATGGCTGGTGGTGCTGATATATCGACAGAAACATGCCATGCCATGACAATGCGGAATGCATCAGCCTCTGCCTGCACCAGACATTTCTGCTCTGTGACTCTGTCCGAGTGAAGAAGACGACGACGACGCTCAAAAGCAAGTGCCACATCTGCTGGCTAGATGCCGCTACATTTTACTGTTGCGTTTGGTGTTGGTGCCCGTGGTGGGCCCCATCTCCTTGGCGATATTCCGGAGCACGTACTTCTGGATCTTCCCGGTGGACGTCTTCGGTAACTCGTCGCGGAAGATCACCGTCTTTGGGACCATGTACCGCGGCATGCGCTCCCGGCTCCACGCG | |||||||||
gi|29630842|gb|CB635851.1|CB635851 OSIIEb16K13.r OSIIEb Oryza sativa Indica Group cDNA clone OSIIEb16K13 3', mRNA sequence GCCGAGACGAATCTTTTGACC EST sequence (targeted fragment marked with yellow): GTTCAAAAAAGCTCTGTCTCATGTGGATTCCCAAGTTAAAAGTATTCCAGCAACAGCTCAGGTTGCAGCACAACAAGGACACTATCTTGCTGAATGTTTTAACAAGATGGACCAATGCAAAGAACATCCAGAAGGTCCGTTGCGCATGACAGGAACAGGATCAGGACGGCACAATTTCCGCCCATTCCGGTACAAGCATCTTGGGCAATTTGCACCCTTGGGTGGAGAGCAAGCTGCTGCAGAGCTCCCAGGCGACTGGGTTTCCATGGGCCATAGCACTCAGTGGCTCTGGTACTCTGTATATGCAAGCAAACAAGTGAGTTGGCGCACACGGATGCTGGTGGTATCCGACTGGACTCGGAGGTTCATATTTGGGAGGGATTCAAGCCGAATTTAGCACTGCCAAATGCTGCATCATTTCTTGTAGAGATAACATTGCTGAATAATTTTGTTGAGTTTGGCTGTGTTTAGTTCGTGTGCCAAAATAAAATTTTTGAAGTATACGGACACATTTGAAGTATTAAACGTAGACTAATAACAAAACAGATTACAGATTTCGCCTGTAAACTGCGAGACGAATCTATTAAGCCTAATTAATTCGTCATTAGCAAATGTTTACTGTAGCACCACATTGTCAAATCAAGACGTAATTAGGCTCAAAAGATTCGTCTCGCAATTTACATGCAAACTGTGTAATTGGTTTTTTTCGTCCATATTTAATGCTCCATATATGTATTCAAACATTTGATGTGACGGAAAAGTTGAAAGTTTGAAGAAAAAAGTTTAAATATAAACCATGCCTTTGTAACAAAAAAAG | |||||||||
gi|89195330|gb|CI051443.1|CI051443 CI051443 Oryza sativa (japonica cultivar-group) cold treated callus Oryza sativa Japonica Gro GCCGAGACGAATCTTTTGACC EST sequence (targeted fragment marked with yellow): CTCATAAAATCACATCATTTTACTTTACATTTGAACATCATTCTACAAATCATTTTAATTTAAATCATATCAACTTATGAAAACTTATGTTTATGTAATATTTATGTAAGCTTATGTTGGTTAAGCTATCTTACACATTATTTCGACTTATTGTTATCATAGTAAATTCCTGCAATAACGTGTGGGTTTCACCTAGTTATTAATGTAGGAGTGCTGACAATCATTTTGCTTTCTTTCATAAAACAGTTACAGCCTTGTTTATTTCGTGAAAAAAAAATTTGGGTGTCACATCGGATGTTTGATTGGATGTTGGAAGGTGTTTTCGGACACGAAAGAAAAAACTAATTTCATAACTCGCCCAGAAACCGCAAGACGGATCTTTTGGGCCTAATTAAGCCGTCATTAGCACATGTGGGGTACTGTAGCACTTATGGCTAATCATGAACTAATTAGGCTCAAAAGATTCGTCTCGCGATTTCCGTGCAAACTGTGCAATTAGTTTTGTTTTTATCTATATTTAATGTCTCATGCATGTGTCCAAAGATTCGATGTGACATTT | |||||||||
gi|33824654|gb|CF338136.1|CF338136 JMT--08-N23.g1 AtJMT-overexpressing transgenic rice plasmid cDNA library (JMT) Oryza sativa J GCCGAGACGAATCTTTTGACC EST sequence (targeted fragment marked with yellow): TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTAAAATTTTATTTTTTTTAATTTAAAAAACTAATTACAAAGTTGGGGGGGAAATCACAAAACAAATTTTTTGAGCCTAATTATTTAAAAATTACCCTTAAGGGCTACAGAAACCCACATTTGCTAATGACAAATTAATTAGGCTTAAAAAATTCGTCTCGGGGTTTTCAGGCGAATTATAAAATTAGTTTTTTCCTTCGGGTCCGAAAACCCCTTCCGATTTTCGGTCAAACGTCCGATGTGACAATCAAAAAATTTTTTTTTCGGAAACTAAACAGGCCCTAAACAACCTACAAATGCCAACAAGGCCTCCAGCTTTTGCATAAAGCAACGACAATCGGG | |||||||||
gi|88378088|gb|CI501357.1|CI501357 CI501357 Oryza sativa (japonica cultivar-group) 2 nuclei stage pistil Oryza sativa Japonica G GCCGAGACGAATCTTTTGACC EST sequence (targeted fragment marked with yellow): GTCAAATCATGGCGTAATTATGCTCAAAAGATTCGTCTCGCAATTTACATGCAAACTGTGTAATTGTTTTTTTCCCCCACATTTAATGCTCCATACATGTGTCCAAACATTTGATGTGACGTTTGAGATCTAAACAAGGCCTCACACAAGAAATCAATTACTTTGTAGATCGTAACTAGCTGCCCTAGCTAGTCATCGCCTGCCGTGGACATGGCAAAGCGTTCGCCCGAATATGTCCATTGTGAAGTTGCTATACGAGGTTGATCCAGGCACCAACGATTTGCCCGTCTATTGTCACCCAGTCAACGCCTATTGCTGCTGGTTGTTCATGCCATTCATCAACCAAACCCCTAACAGGTTGGCAATCCTCAAAACATCTGAGCCTCTTGAAC | |||||||||
gi|88503608|gb|CI431114.1|CI431114 CI431114 Oryza sativa (japonica cultivar-group) 4th leaf leaf 1mM ACC(1-aminocyclopropane-1-c GCCGAGACGAATCTTTTGACC EST sequence (targeted fragment marked with yellow): GAATGGAAAAACTAATTTCATAACTCGCCTGAAAACTACGAGACGAACTTTTTGAGCCTAATTAAACTGCCATTAGCACATGTAGGTTACTGTAACACTTATGGCTAATCATGGACTAATTAGGCTCAAAAGATTCGTCTCGCCATTTACATACAAATTGTGCAATTAGTTTTTCTTTTTATCTATATTTAATGCTCTATACATGTGTCCAAAGATTCGATGTGATGTTTTTGTGAAAAGTTTTTGGGAACTAAACAGGGCCAGGTCAGGCCAAATAATCTGAGTATGCAGCCATGTGGGGTTATTGTGCAGCAGCATAGAGACCCGGACGATCCTCCTCAGGTCATTCACAGTGCATCTCTGTGGCATTTGGCCTCAGCACAA | |||||||||
gi|88465043|gb|CI514815.1|CI514815 CI514815 Oryza sativa (japonica cultivar-group) 4 nuclei stage pistil Oryza sativa Japonica G GCCGAGACGAATCTTTTGACC EST sequence (targeted fragment marked with yellow): CGCTGTCTCTTTATAAGTTATATCAAGACATTTGAGTATGTAACTAAATCTCTTCTTTTTATAAAGTTAATGTCCACTAAACACTTAATGTCCATCATTAGCAAATATTTACTGTGGCACCACATTGTCATATCATGACGCAATTAGGTTTAAAAGATTCGTCTCGCAATTTACACGTAAACTATGTAATTTATTTTTTTCGTATATATTTAATACTCCGTACATGTGTTTAAACGTTCGATGTGACGGGAAAAAAAAATTTGCCGGTGGATTTAAACACCCCCTTAATGTCGATGCAACAGTACTCGAGTCCTTGGCGGGGGTTATATTTTCTTGGCTACTCCAATTAGCTTGCAGATCTGGTTGGATTTTTTTTTATTGTGAGCTAGCTTAATTTAGTCGGTATTG | |||||||||
gi|88246675|gb|CI246524.1|CI246524 CI246524 Oryza sativa (japonica cultivar-group) Shoot and root of germinating seeds Oryza sat GCCGAGACGAATCTTTTGACC EST sequence (targeted fragment marked with yellow): AATTGACTACATGCATGCATGCCTTATATTATGAAACATCTAAAAAAATGGTTGTGCCTTATATTATGGAATGGAGGGAGTATTTGATATTAGGTCCTTCCCTAATATTCACGTTTTTTTATAATGAGCCGAGAGAGTTTGAACCTGGCAACAAAGGGCCTGTTTAGTTCGCGAAAAAAAAAAAATTTTGGATGTCACATCGGATGTTTGACCGGATATTGGAAAGAATTTTTGGACACGAATAAAAAAACTAATTTCATAACTCGTCTGGAAACCGCGAGACGAATCTTTTGAGCCTAATTAATCCGTCATTAGCACATGTGGGTTACTGTAGCACTTATGGCTAATCATGGACTAATTAGGCTTAAAAGATTCGTCTCGTGATTTCCTGCCTAATTGTGCAATTAGTTTTTTTATTTACCTATATTTAATACTTCATGCATATTTTCAAAGATTCGATGTGATGTTTTTGGAAAAAAAATTTGGGGAACTAAACGGGGCCCAAATTATGCAGGAGCATGTTTAATCATCCCA | |||||||||
gi|88721184|gb|CI744483.1|CI744483 CI744483 Oryza sativa (japonica cultivar-group) library (Kikuchi S) Oryza sativa Japonica Gro GCCGAGACGAATCTTTTGACC EST sequence (targeted fragment marked with yellow): AAAAAAATTTAAGCTATACCTCACCTATTTTCACCATGTGTACAGCTTCGCCCCTGACTGTAGTATCACATTGTCAAATCATGGCGTAATTAGGCTCAAAAGATTCGTCTCGCAATTTACATGCAAACTGTGCAATTGGTTTTTTTTTCGTCCACATTTAATGTTTCATGCATGTGTCCAAACATTTAATGTGATGTTTTTGGTCAGATTTTTTTTGAATCTAAACAAAGCCATAATTTATCGATAATCGTATGGATAGCCTCTTTGTTTTTGCAATTGGCGGGCTCCTTATGCGTAAAGCTGAAGCTATGCTAAATCTGACCAGGGTAGCAAATGAAAGGGTTTGCATACGTTGGTTTAAACC | |||||||||
gi|86896188|gb|CI330117.1|CI330117 CI330117 Oryza sativa (japonica cultivar-group) shoot Oryza sativa Japonica Group cDNA clone GCCGAGACGAATCTTTTGACC EST sequence (targeted fragment marked with yellow): GAAGTATTAAACATAGACTAATAACAAAACAAATTACAGATTCCGCATGTAAACTGTGAGATGAATTTATTAAGCATAATTAGTCTGTCGTTGGCAAATATTTACTGTAGCATAATATTGTCAAATCATGGCGTAATTATGCTCAAAAGATTCGTCTCGCAATTTACATGCAAACTGTGTAATTGTTTTTTTCCCCCACATTTAATGCTCCATACATGTGTCCAAACATTTGATGTGACGTTTGAGATCTAAACAAGGCCTCACACAAGAAATCAATTACTTTGTAGATCGTAACTAGCTGCCCTAGCTAGTCATCGCCTGCCGTGGACATGGCAAAGCGTTCGCCCGAATATGTCCATTGTGAAGTTGCTATACGAGGTTGATCCAGGCACCAACGATTTGCCCGTCTATTGTCACCCAGTCAACGCCTATTGCTGTTGGTTGTTCATGCCACTCATCAACCAAAC | |||||||||
gi|88414243|gb|CI533613.1|CI533613 CI533613 Oryza sativa (japonica cultivar-group) 1 day after pollination pistil Oryza sativa J GCCGAGACGAATCTTTTGACC EST sequence (targeted fragment marked with yellow): GTATAAAATATTAAATATAGATAAATTAAAAAACTAATTACAAAGTTAGGGGGGAAATCACGAGACAAATCTTTTGAGCCTAATTAGTTAATAATTAGCCATAAGTGCTACAGTAACCCACATGTGCTAATGACAAATTAATTAGGCTTAAAAGATTCGTCTCGTGGTTTTCAGGCGAGTTATGAAATTAGTTTTTTCCTTCGTGTCCGAAAACCCCTTCCGATATTCGGTCAAACGTCCGATGTGACAATCAAAAATTTTCTTTTCGCGAACTAAACAGGCCCTAAACAACCTACAAATGCCAACAAGGCCTCCAGCTTCTGCATAAAGCAACGACAATCGGGAATCAAATCCTTATGAACCTATCGCCAGAGGTTGATACATCGATCATGTATATCGACATGTGCCT | |||||||||
gi|88402687|gb|CI598914.1|CI598914 CI598914 Oryza sativa (japonica cultivar-group) flower Oryza sativa Japonica Group cDNA clone GCCGAGACGAATCTTTTGACC EST sequence (targeted fragment marked with yellow): GTGAAAAGAACAAGAAGACAGATAGAGAAGGAGAAAACCCACCGCGCGCGGCGGCGGCGGGGGCGAGGGTCGACGAGGCGACGCATTTTGGTGATCTCGTGGTGTCACGGTGCGTGTGCGATGACGAGGCGGTGCTCGCACTGCAGCAACAACGGCCACAACGCGCGGACCTGCCCCGCCCGCGGCGGCGGTGGAGGCGGAGGCGGGGTGAGGCTGTTCGGCGTGCGGCTCACGTCGCCGCCGGAGGTGGCGATGAAAAACAGCGCGAGCATGAGCTGCATCGCGTCGTCGCTCGGGAGTGGGGGTGGGTCAGGGGGTTCGTCGCGGCGGGAACGGGAAGGGGAGGAGGAGGAGGGGGAGAGGGCGCGGCCGGTTACGCTTCCGACAACCCCACCCACGCTCTGTTCGACAA | |||||||||
gi|44670591|gb|CR284025.1|CR284025 CR284025 Oryza sativa library (Han B) Oryza sativa cDNA clone p865a03p3, mRNA sequence GCCGAGACGAATCTTTTGACC EST sequence (targeted fragment marked with yellow): TTTTTTTTTTTTTTTTTTTTTTTTTTTGCTAAATCATGGAACAATTTGGTTTAAAAGATTCGTCTCGTAATTTACACGCAAACTATGTAATTAGTTTTTTTCGTCTAATATTTAATACTTCGTACATGTCTTTAAAAAAAATTATCGGTGCATCTAAACACCCCCCCCAAAAAAAAAAAAAAACAGGCCAACATACCATGCCATGACAATGCGGAATGCATCAGCCTCTGCCTGCACCAGGCATTTCTGCTCTGTGACTCTGTCCGAGTGAAGAAGACGACGACGACGACGACGACGCTAAAAAGCAAGTGACACATCTGCTGGCTAGATGCCGCTACATTTTACTGTTGCGGTTGGTGTTGGTGCCCGTGGTGGGCCCCATCTCCTTGGCGATATTCCGGAGCACGTACTTCTGGATCTTTCCGGTGGACGTCTTCGGTAACTCGTCGCGGAAGATCACCGTCTCTGGGACCATGTACCGCGGNATAGCGCTCCCGGGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAACCGGAGACAGGGGGAAACAAGGCACAACAGGGGCCCCGGGAAAAAGTGGGGCGCCCCCAAAGGCGAAAAAATTCAAATTTGGGCCCGACATAACAAAAAGCACGGAATCACGAAAAAGG | |||||||||
gi|89198180|gb|CI015569.1|CI015569 CI015569 Oryza sativa (japonica cultivar-group) etiolated shoot Oryza sativa Japonica Group c GCCGAGACGAATCTTTTGACC EST sequence (targeted fragment marked with yellow): TTTTTACGATGATGTGGGTGTGCGTATTCCATTTTATAGTAAAGAACATTAAATCACTATATTAGGACAACTATTTTTCCTAACTAGGTATGAACACCCTGACACATCACTATACAATTTCTGGAATAATGCTAGCCCCCTTTGAAGTTCAGGGCCGGAACAACTTGTTCAGTTGTGCTCCGTTACTCAGCTTTGCTTAATAGAAGCAAACAGATCCTTGAGAGGACGATTGTGAGCTTCAGCTCGGGTGACAATCTCGACAACTTGGTAGGAAGATTCCTCTCGGCATAACAATGCCTCCACAGCTACTTCTGCGACTTGCTGTCTCGATATGGAGCCC | |||||||||
gi|88844107|gb|CI001164.1|CI001164 CI001164 Oryza sativa (japonica cultivar-group) etiolated shoot Oryza sativa Japonica Group c GCCGAGACGAATCTTTTGACC EST sequence (targeted fragment marked with yellow): TTTTTTTTACACCATACATGCAAACCAAATTGCATGTTGTCCAAAAATCCAAACGGAAACCAACAAGATTACAAGAAGCACACTCTCACATCATCATATCGATCTCTCCACACAACGAGGTTAACTATACCTGAGTGAAAATCTCGCATTCATCGTCGCATGCCCGCCGCAGCGTTGCCGCTTGCTAGAATGGACGGTTAAAAGGTTCGTCTTGGCTAATAGCTTCGACAAAGTTCAGCTGCTGCTCCTACTCGGAGTAGTCTTGTAACTGTAAGCTGGAGCCGGGCTCCCGGCGAGGTTGCTGCTGCACTTGCGCCACTGCCACGAGTCGGCCGGCGTGCTGGGCAGCGGCGGCAGCGGCAGGACGGCGGGGCCGGGGAGGCGGCACAGCCCGAACGGCCACCCCTCGCAGTCACGGAGCCCCTCCCACTTCGCCGGCG | |||||||||
gi|58688733|gb|CK077420.1|CK077420 81832rsicen_9419.y1 Oryza sativa cv. LYP9 booting whole plant cDNA library Oryza sativa Indic GCCGAGACGAATCTTTTGACC EST sequence (targeted fragment marked with yellow): ACTAGTGGATCCCCGGGCTGCAGGCCCCCCCCCCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGGTCAAATCATGGCGTAATTATGCTCAAAAGATTCGTCTCGCAATTTACATGCAAACTGTGTAATTGTTTTTTTCCCCCACATTTAATGCTCCATACATGTGTCCAAACATTTGATGTGACGTTTGAGATCTAAACAAGGCCTCACACAAGAAATCAATTACTTTGTAGATCGTAACTAGCTGCCCTAGCTAGTCATCGCCTGCCGTGGACATGGCAAAGCGTTCGCCCGAATATGTCCATTGTGAAGTTGCTATACGAGGTTGATCCAGGCACCAACGATTTGCCCGTCTATTGTCACCCAGTCAACGCCTATTGCTGCTGGTTGTTCATGCCATTCATCAACCAAACCCCTAACAGGTTGGCAATCCTCAAAACATCTGAGCCTCTTGAACTGCATTTCTCAGTTCTGACAAACACCGTTCTGATACCATCTTTTCTTGTTCACCACTAAGACAGCAGCTGGCCACCCTTTCATATTCCTGTTGAGCACGATGTGCAGGGTTTAGCAAAACACGATCATTCTCA | |||||||||
gi|40487470|gb|BX898480.1|BX898480 BX898480 Oryza sativa library (Han B) Oryza sativa cDNA clone y680g12p5, mRNA sequence GCCGAGACGAATCTTTTGACC EST sequence (targeted fragment marked with yellow): CATTATGGCCGGGATATAAGGTGAAACAAGCCAATTAAACGACCGAAAGATTTTCGATATACTTAGTGAAACAATTCCGATATACTTGGTGGAACAGCGTGCAGCATATAAAAATAATTCAATAATAAGCTAAAAAAAATTTCATCGGAATATATCCATGTGTGATCTTGTTTTAAAGATTTAATTGCAACGAATTTAATGGTGCAATCATATCATGATTTGGATAAATAATTTAAGAATAAAAATAGTTTAATGTGGTTTTGCACGTATGCGTTATGCTGACATCAGCACCCGGTTTTTCTCTCTCCTCATCGGGCGCCCGATCCTGAGTTGCCTCAAAAATAAACTCATGAAGTTATCTGAAGGGCTGTTTGGGAAACAGGGACTTATTCCAAATACCTAACACATCGGATGTTTGGACACTAATTTGAAGTATTAAATATAGACTAATTATAAAACACATTCCATAACATTAGACTAATTCGCGAGACAAATTTTTTGAGCCTAAATACGCCATGATTTAATAATATGATACTACAGTAAACTTTTGATAATTATGGATTAATTAGGTTTAAAAAATTCGTCTCGCCGATTTACTTCAATTATAAACTTGATTTTTATTAGCTAAGTTAGTACTTAACTTCGTCAATATCGAGTTCACGTCTAA | |||||||||