miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse




mature miRNA: GGATTTTCGCATGCGGTTGTG
species: Oryza sativa
database: miRNEST
The numbers on the right side of the alignments show a score calculated for them.
When calculating the score, a mismatch is given a score of 1, bulge: 2, and wobble: 0.5.

Predicted miRNA targets
gi|88987154|gb|CI034195.1|CI034195 CI034195 Oryza sativa (japonica cultivar-group) etiolated shoot Oryza sativa Japonica Group c

GGATTTTCGCATGCGGTTGTG
|||||||||||. ||||| |
CCTAAAAGCGTGGGCCAAGCC

EST sequence (targeted fragment marked with yellow):
TTTTTTTAGCATCGCAATCACGCTAAGCAGACCAGGTGTTGATGAAAACAGTTTCATGTTTCATCGCATCTCTACAAGTCACGGAAGATCCAAAGAACATGTTCTTTCTTACTGGTTTGGTTTCTTCTTCACAAAATAAGAGAGGGATTACATCGGAAAAAAAATTGAATGAAGTATGAAACCCAAAGTACAACAAAGACTCGGTTTCTATTTCTTCTTCCCAGCCTTGCCCTCCTTTCTTCTGACGATCTCATCGGCATACCGGATGCCCTTCCCCTTGTATGGTTCAGGCGGCCTCCACTTCTTTATGGAAGCAGCGAATNGACCGATCTCGCTCTTGTCGTAGCCACTCACAATGATCCTGGTGTTCTCTTCCACCTTAACTTTCAGGCCTTCTGGAACAGCCATCCGAACCGGGTGCGAAAATCCCAGGTTCATCACAAGATCTTTACCCTCCAACGCTGCACGGTATCCAGTAGGCCAACAGTGCTCGAGGAATTCCGCAGCTTTTAGAGCAGAAGTAACACTTCCGTACAGGCCTAGAAGT



gi|58674208|gb|CK062894.1|CK062894 53782rsicek_1812.y1 Oryza sativa cv. PA64s panicle ferile cDNA library Oryza sativa Indica Gr

GGATTTTCGCATGCGGTTGTG
|||||||||||||||||.
GATAAAAGCGTACGCCAACGA

EST sequence (targeted fragment marked with yellow):
GCACGAGGGCGGCGGGGTGCGACGGATCCGATGCTGCCGCCGACGGATCCGGCACCGGTGACGACGATGGGTGGCGGGGGCGATGGATCCGCCGCCGGCGACGACGCTGGGCGACGGGGGCGACGGATCCGCCGCCGACGACGACGCCGAGCGGTGGGGGTGACGGATCCGGTGCCGCCGCCGACGGATCCGGCGCCGGCGACGGCGGGGGGTGGCGGGAGCGATGGATCCGCCGCCGGCGACGGCGTGCGGCGTGGATGCGGCGCTCCGGTGGCGGGCTAGGGTTTGGTTTGGGGTTTTTTCGATTTTATTTTTTTTTGTTTGCTCAATTTATTTTCGCATGCGGCCGGTATAAGCAACCGCATGCGAAAATAGGATTTTCGCATGCGGTTGCGCCGGCCGCATGCAAAAAGGGTGATTTTTACAGACGATTTCGTCCATGCGGTTGGCACAACCGCATGGAAAGATGGTTCT



gi|88200464|gb|CI200314.1|CI200314 CI200314 Oryza sativa (japonica cultivar-group) Panicles mixture of one, two, three weeks aft

GGATTTTCGCATGCGGTTGTG
||||||| ||| |||.||.||
CCTAAAATCGTCCGCTAATAC

EST sequence (targeted fragment marked with yellow):
TTTTTTTTTTTACATAATCGCCTGCTAAAATCCATTACTAGTAGTAGATAGCACACTACACCATGTTCTTTTCATCAACCGCACACATAAATGTGAAATATATTAATTCATCAGCTATATGCAAAAACAATAACATAAGACAAGATAACTTACAATACAGAACTGGCTACATACTAAACCAATGCTTTTCCAAGCCACAAGAGTCGACCTTTACGCATTGCAAGGTTTAGTAGACTTCAATGAAATTCCAGTGACAAACTCATGAGAAAAATGAACTCTTTTATCACCACTGCAGAAAATCTTACAAGATGTAATGCAATCAGAATCATTTTGACAGGAGCAGTACATCAGGCTTCCGCTGCTTGCCTGGTGTGTTTGGCTTGGAGCTGGGTCTAGAGCTCGACGCGGTGCTACCAGCTGTGCCTACTGACACGATTGCCCCAGAAGCTGCTGCAGCTGCCTCCTTGGCAGCCTTGCGTGCGCTTTTGTCGAGCTCGATC



gi|87016028|gb|CI281771.1|CI281771 CI281771 Oryza sativa (japonica cultivar-group) supermix Oryza sativa Japonica Group cDNA clo

GGATTTTCGCATGCGGTTGTG
|||||||||||||||||.|||
CCTAAAAGCGTACGCCAGCAC

EST sequence (targeted fragment marked with yellow):
TTTTTTTTCATACGGACGAAACTGATTGTCGCATGCGGTTGCTCCAGCCGGAAGCGTGACAAGGTCTGTGAAAATCGGAGTTTTTCCGTGCGGCCAGCACGACCGCATGCGAAAATCCGCTTAAGCCGATTGCATGCAAAAAAGAAAAAGCGCGAAAAAAAATAAAATTCCACAAGAAAAAACTCTAGCCCCGCCGCCGTCGCCATCGCTTCCGTCATCGCCATCGCCAGCCGGTCGGATCCACGGCTGACGGATCCGCCACCCAGCGACCTCTGGCCGTCGGGATCGAAGAAGATGAGGGAGAGGGAGGAGAGGCGGCGGGATCCACGAGCTTGCCGCAGCCGCCGACGTCACAATCGCCGTAGTCACGCCACACCATCGCCTCAGCTGCAGCCGCTCCTGAGGGCGGCGCCACCGAATCCGCCGCCCGCCGTCGCTGCTCACTCCCACCGCCATTGCTGTTCCCGAGGTCGGGGGCGGTGGATCTGCGCGTCTCCGTCGCCCGTGAGGGCGTTGGTAGCGGATCTGCCCGCTGCCGCCGCCACTGCCCGCCGCCGCCACTCCTAAGGT



gi|44677049|gb|CR290483.1|CR290483 CR290483 Oryza sativa library (Han B) Oryza sativa cDNA clone y667f10p3, mRNA sequence

GGATTTTCGCATGCGGTTGTG
||||||||.|||||||||. .
CCTAAAAGTGTACGCCAATCT

EST sequence (targeted fragment marked with yellow):
TTTTTTTTTTTTTTTTTTTTTTTTTTCGCAATTGGACGGCTTAAGCACTTGTATGGAAAAATTGAATTTTTGCATGCAGTTGCTCTAACCGCATGTGAAAATCCAATTTCTACAGGCACCTGGGTGTAGGCAGGCTACCCACCCGCATGTGAAAATTGGTTTTGACTGCAAGGAAATTTTTTTTAGTAGTGTGCTCTTCAGCTTCATAAAGAGTGAAGTGCATAGCGGTACTTAAACTTGTGCGGGTATATGATCTAGATCCCTAAACTATAAATGTATTTTCGGATCCCTGAACTTATCTAGGGTGTCATATAGATCCAAACGAGTTCTAACCTGCGCTGACGTGATATTCCATGCTAGCGCCTACTCCTATGGTGTCAATGAAATCCCTACTTCAGTCATATAGAAAAAATAATGTTAAAAATACATTTTCTCCTCTCTACCTAAGAGGAGAAAATATGTTTTTAAATTTCAATTTTTTCTATGTGATTGACCTGTGAGTTCCACCGACACTATAAGGCGCCACCGTGCCCAACCACGTTAGGCCTTAACGGGTTTAAACTTCATTTGGGACTTTTATTTGAACCCCAAAAACTTTGGAAAACCCTTAAAAATTTATCTTAAGCATTTCGGAA



gi|88462392|gb|CI514524.1|CI514524 CI514524 Oryza sativa (japonica cultivar-group) 9 leaf-stage leaf Oryza sativa Japonica Group

GGATTTTCGCATGCGGTTGTG
||||||||||||||||||..|
CCTAAAAGCGTACGCCAATGC

EST sequence (targeted fragment marked with yellow):
GGTTAGGGATAATTTTAACATTTATCTTTTTGTTAATAATCGTACAATCACTACTAAAAAAGTGTTTTTGCATGCGAGCTACAAGGATCTTTTCATGCGGTTGGTTGGTGCAACCGCATGGGCGAGCTCTTCTGNAAAAATCGCTCTTTGGCGTAACCGCATGCGAAAATCCATGCAATCGCATATACCGGCCGCATGCAAAAATAAATTCGGCAANAAAAAAATAAAATCCAAAAAACCCCCAAACCCTAGCCCGTCGCCGGATCCGTCGCCCCCGCCGCCCGCTGTCGTCGGCAGCACCAAATCGGCGCGGGGCACCGCCGACCGAGGAGGCCGCCACGGCGGCGTTGAGGGGGGGGGGGGAGGCCCCACTCCCCCCCA



gi|88385148|gb|CI561804.1|CI561804 CI561804 Oryza sativa (japonica cultivar-group) root of seedling gamma-irradiated (4min), aft

GGATTTTCGCATGCGGTTGTG
||||||| ||| |||.||.||
CCTAAAATCGTCCGCTAATAC

EST sequence (targeted fragment marked with yellow):
GCAATTTATGCTGCTGAGAATTCCATAAGATAGTAGTTGTAGTAAGGAACATCAAATTAATATATGTTCGGTAAGAAATGCATAAAACAAGTCAATACATAATCGCCTGCTAAAATCCATTACTAGTAGTAGATAGCACACTACACCATGTTCTTTTCATCAACCGCACACATAAATGTGAAATATATTAATTCATCAGCTATATGCAAAAACAATAACATAAGACAAGATAACTTACAATACAGAACTGGCTACATACTAAACCAATGCTTTTCCAAGCCACAAGAGTCGACCTTTACGCATTGCAAGGTTTAGTAGACTTCAATGAAATTCCAGTGACAAACTCATGAGAAAAATGAACTCTTTTATCACCACTGCAGAAAATCTTACAAGATGTAATGCAATCAGAAT



gi|88844249|gb|CI005622.1|CI005622 CI005622 Oryza sativa (japonica cultivar-group) etiolated shoot Oryza sativa Japonica Group c

GGATTTTCGCATGCGGTTGTG
|||||||||||. ||||| |
CCTAAAAGCGTGGGCCAAGCC

EST sequence (targeted fragment marked with yellow):
TTGCTTATCAATTGTATCATCATGTATATATTTGCTGGGAGTCTTGGTAGCATCGCAATCACGCTAAGCAGACCATGTGTTGATGAAAACAGTTTCATGTTTCATCGCATCTCTACAAGTCACGGAAGATCCAAAGAACATGTTCTTTCTTACTGGTTTGGTTTCTTCTTCACAAAATAATAGAGGGTATTACATCGGAAAAAAAATTGAATGAAGTATGAAACCCAAAGTACAACAAAGACTCGGTTTCTATTTCTTCTTCCCAGCCTTGCCCTCCTTTCTTCTGACGATCTCATCGGCATACCGGATGCCCTTCCCCTTGTATGGTTCATGCGGCCTCCACTTCTTTATGGAAGCAGCGAATTGACCGATCTCGCTCTTGTCGTAGCCACTCACAATGATCCTGGTGTTCTCTTCCACCTTAACTTTCAGGCCTTCTGGAACAGCCATCCGAACCGGGTGCGAAAATCCCAGGTTCATCACAAGATCTTTACCCTCCA



gi|88238470|gb|CI238319.1|CI238319 CI238319 Oryza sativa (japonica cultivar-group) Shoot and root of germinating seeds Oryza sat

GGATTTTCGCATGCGGTTGTG
.|||||||||||||||||..|
TCTAAAAGCGTACGCCAATGC

EST sequence (targeted fragment marked with yellow):
TTTTTTTTTTTTTTTTTTTTTTATCGGCGGAAACATCTCTAATTTTTATAATAGTAGATATGCCACTACTACAGATTCAGTTTCGCAAACGGGCCATAACGATTTTCGCATGCGGTTGGGCCAGCCGCATGCGCGAAATCGTCTGTAAATATGGCGATCTTTGCATGCGGCCAGCGTAACCGCATGCGAAAATCTGATTTTCGCATGCGGACGCTTAAGTCGACCGCATGAAAAGAGAAAACATTGTGAAAAAAATAAAATTAAAAAAAAACAAAGTAAAACTAGCGCCGCCGCCGCCCGAGTTCGTCGCAGCCGCCGCCACCGCTCCCGTCGTCGCCATCGCCGTCGCTAGCCGCTGGTACAACCACCCCGCCCAGATCCACTCCAGCCACAGCTGCTTGAGACCGCTGCCGTCCCCGCCGCCTACCGTCGTCGTCGTTGTCGCTACGCCCGAGCTCGCCGCCGCCGCCCGCCGCCTTCGTCGTGCCCGAGGTCGTCGTCACCGCGGGGGAGGTCGTCATCGCTGCGCCCGAGCCGGATC



gi|33682652|gb|CF310891.1|CF310891 ABF--05-M24.g1 ABF3-overexpressing transgenic rice plasmid cDNA library (ABF) Oryza sativa Ja

GGATTTTCGCATGCGGTTGTG
|||||||||||. ||||| |
CCTAAAAGCGTGGGCCAAGCC

EST sequence (targeted fragment marked with yellow):
TTTTTTTTTTTTTTTACAAAAAAAAAAAAGCAAATGCTTATCAGTTGTATCATCATGTATATATGTTGCTGGGAGTTCTTGGTAGCATCGCAATCACGCTAAGCAGACCATGTGTTGATGAAAACAGTTTCATGTTTCATCGCATCTCTACAAGTCACGGAAGATCCAAAGAACATGTTCTTTCTTACTGGTTTGGTTTCTTCTTCACAAAATAAGAGAGGGATTACATCGGAAAAAAAATTGAATGAAGTATGAAACCCAAAGTACAACAAAGACTCGGTTTCTATTTCTTCTTCCCAGCCTTGCCCTCCTTTCTTCTGACGATCTCATCGGCATACCGGATGCCCTTCCCCTTGTATGGTTCAGGCGGCCTCCACTTCTTTATGGAAGCAGCGAATTGACCGATCTCGCTCTTGTCGTAGCCACTCACAATGATCCCTGGTGTTCTCTTCCACCTTAACTTTCAGGCCTTCTGGAACAGCCATCCGAACCGGGTGCGAAAATCCCAGGTTCATCACAAGATCTTTACCCCCCACCGCTGCACGGTATCCAACCCCAACTAGCTGAAGCTTCTTATCAAACCCCTTTGACACACCTACGATGATGTTGTCA



gi|88530760|gb|CI459178.1|CI459178 CI459178 Oryza sativa (japonica cultivar-group) young ear Oryza sativa Japonica Group cDNA cl

GGATTTTCGCATGCGGTTGTG
|||||||||||. ||||| |
CCTAAAAGCGTGGGCCAAGCC

EST sequence (targeted fragment marked with yellow):
CCAAAGAACATGTTCTTTCTTACTGGTTTGGTTTCTTCTTCACAAAATAAGAGAGGGATTACATCGGAAAAAAAATTGAATGAAGTATGAAACCCAAAGTACAACAAAGACTCGGTTTCTATTTCTTCTTCCCAGCCTTGCCCTCCTTTCTTCTGACGATCTCATCGGCATACCGGATGCCCTTCCCCTTGTATGGTTCAGGCGGCCTCCACTTCTTTATGGAAGCAGCGAATTGACCGATCTCGCTCTTGTCGTAGCCACTCACAATGATCCTGGTGTTCTCTTCCACCTTAACTTTCAGGCCTTCTGGAACAGCCATCCGAACCGGGTGCGAAAATCCCAGGTTCATCANAAGATCTTTACCCTCCACCGCTGCACGGTATCCAACCCCAACTAGCTGAAGCTTCTTA



gi|117224541|gb|CT860423.1|CT860423 CT860423 Oryza sativa (indica cultivar-group) cv. Guang Lu Ai 4 Oryza sativa Indica Group cD

GGATTTTCGCATGCGGTTGTG
||||||||||.| |.||||.
ACTAAAAGCGTGCTCTAACAT

EST sequence (targeted fragment marked with yellow):
ACTAATTAATATTTTTAATAATATACGAAATTTTTATTTTGTATCTATTTATATTTATATAATAACAATAACAATAAAATAACAATAACAATAACACACGCACCACCCCGAAATCACGCATAAATAATCACACACAGTAACATATTTACGTCGTTTATAGTCGTCCGCAAACATGAAAGAATACAAAATCGTCGTCCTAGGAAGTGGTGGTGTTGGAAAATCCGCGTTGACCGTTCAGTTCGTGGAAGGTATATTCGTCGAAAAATATGATCCGACAATCGAGGACAGCTACAGGAAGCAAGTCGAAATCGATGGTCAACAATGCATGATGGAAATTCTCGATACGGCCGGAACAGAACAATTCACAGCCATGCGCGACTTGTACATGAAAAGCGGCCAAGGCTTTGTACTCGTGTACTCGATCACAGCACAGGCGACGTTCAACGACCTCATGGAGTTGCACGACCAGATTGTGCGCGTCAAAGACACGTCCGACGTGCCCATGATACTCGTGGGCAACAAGTGCGACTTGGACGACGAGCGAGTGGTGTCCAAGGACCAGGGACAACAGTTGGCTAAGAGTTTCAATTGTGCGTTCATGGAGGCCTCGGCCAAGAACAAGATCAACGTGCCCGAGATTTTCTACAATCTCGTGCGAAAATCAACTCGAAAGCACCGGCGGCCAACTCTCGTTCGGGCAAAACTACCAAAGCTTAATCGCACGCGTTCAAACCCAAAGAAGAGCTGGTTGTGTTTGGAATTTAATTTTTTTATTTTATTTTTAAAAACCTTTTTAATATTACACCAATTTTTATTATATAAAAAATTCCACTTTATTTTTTATTTATTTTATAACAAAATATATACAAGAATTTTTTTTTTAACCCTGGGTTTTAATGGGGTTGGTTTTTTTTTTAAAAAAAAAAAAAGGTTTTTAACCTTTTTTGTTTTTTTTTTTTAAAATTGGGGAAATATAAATAAAATGGGGGTTTTTTTTTTTTTTTTTTTAAAAAAAAAATTTTTTTTTGTGGGGGAAAAAAAAGAACTGGGGGGGCGGAGAAATATTTTTTTTTTTTATATAAAATTTATTTTTTAATTTTTTTTTTTTTTTTTTTTTATTATTAATATAAAAAAAAAATTTTTTTTTTTTTTTTATAAAAAAAAAAAAAGGGTTTTTTTTTTTTTTTTTTTTTTTAATAT



gi|88336573|gb|CI656844.1|CI656844 CI656844 Oryza sativa (japonica cultivar-group) callus UVB iradiated callus, 24hr after treat

GGATTTTCGCATGCGGTTGTG
|||||||||||||||||.
GATAAAAGCGTACGCCAACGA

EST sequence (targeted fragment marked with yellow):
GATCTTCTCTCCACCATTATTTCTCCTCAACCCCCCCTCTCTCTCTCTCTCACACACACACACAGCAAGGTCGCGGCGGGCGTCGGCGACACCGAGGAGGCACGCGGTGGCGGTGGCCGAGGGCGGCGCGGCGTGAGGCGGGCGGTGGGGGCGACGAATCTGGCACCGTGCGGCGGCAGGCTAGGGTTTGGGATATTTTAGATTTTTATTTTTTTTGTTTGCTGAATTTATTTTCACATGCGGCCGGTATAAGCAACCGCATGCGAAAATAGGATTTTCGCATGCGGTTGGGCCGGCCGCATGCGAAAAGGGTGATTTTTGCAGACCCTTCTCCCCCATGC



gi|117251806|gb|CT855326.1|CT855326 CT855326 Oryza sativa (indica cultivar-group) cv. Guang Lu Ai 4 Oryza sativa Indica Group cD

GGATTTTCGCATGCGGTTGTG
|||||||.|||.||||||||
GCTAAAAGTGTATGCCAACAC

EST sequence (targeted fragment marked with yellow):
ACAGATACAGAGCGAATACGAGACGGAACGAATACAGTAGCGAATATTTACCGGTATATAAAAAACCCCTCAAATTGAGTTTCTTGATCAAGGAAGAGATATCACTTATTATTTTAGTTCAACATCTCCAACATTTATATCGTCAATTTTGTAGACTGTCTCACAACCGTATGTGAAAATCGATTTTCATGGTTGTTCCTCTAAGAGATCCATATGCAAATATGATTATCATTTTCTATTCTCAAGACCTTTTACTAGATGTATAACTTACTTGCCATTGTATAAATTGGAGATGTTATTTATTTTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGGGGGGGGGGGGCCCCGAACCCATTCTATCCTTAGGGGTATTTGTTCCCCCCCCTACACGGGGGGGACTGTTAAAACCATGGGAATGGCAAACTCATTGCCCTCCCAAAACATATCCCTTTGGATAAATGTCCCTTTAGCGAAGGGGGCGGAAACGAGAAAGGGTCCCAACCGTTGCCCTTTCCGAAAGGTGACCGGAACGGAAAGTGAAAGGGGACCTGACCTGCAGCGGTAGTTTATGGCGCGCGGGGGGTGTACTTTACACTTGCCAAAACCCTAGCGTGCGCACCACCTTAAGTTCCTTTTTTTTTTTTTTTCCTTTTCTTGTCCCCCCGTTAGGTGCTTTTCCGGGGATAATTTAAGGGTGGGTTTTTTTTTTGGACGGATTTTGGCCTAAAGACCCCCCAACGGAAAAAGTTTGAGGGGGGGGGCGTGTCCGGTGGGGTCGCCTCCCTCGACATAAACGTTTTTTTCCTTTTGGTTTGGGATCCCCCTTTTTTTAGGACGGTCTTTTCACCCTAACCGAACCCCCCCCTTCTTTTTTTTTTTTTTTTTTTTTTTTTATGGGGGGGGTTTGCGCGGCCCGGTCCTCTGGAAAAAAAAAATTTTATTAAAAATAAAATAAACCGTAAATAAAAAAAATTTTTTGGGTATCTTTTTGGGGGGGGCGTGCTGGGAGGGGAGGGGGCGGCCCCTCTTTTTTTTTTTTTTTTTTTTTTTTCCTTTTTTTATAATTTTTTCCCCCCTTCAAAAAACCCCCCCAAAAAAAATAAAATTTAAAAAATTAAAAAAAAAAAAAAAAAAAA



gi|88434104|gb|CI586982.1|CI586982 CI586982 Oryza sativa (japonica cultivar-group) flower Oryza sativa Japonica Group cDNA clone

GGATTTTCGCATGCGGTTGTG
.|||||.|||||||||. |..
TCTAAAGGCGTACGCCGTCGT

EST sequence (targeted fragment marked with yellow):
GATATGTGTGACAATTGATAAACTACTTCTCATTGTGTTTGACCTGGGGGGGGACGAAGGAACGGGAGACCGCGCGGCCGGGCGGGGGTCGAGGATAGAGATGTCGTTACCATAATAGAGGTAATGACTGCTGTGGGGAGATTGGCGGCAGCGACGGGCTCTCCGTCACCGTCGTAGAAGCGGAGGTGCTGCCGCATGCGGAAATCTGCCTGCTGATGGTGTTTACCGGAGTCGATGGGGGAGGATGTGGACAAGTGTCGATGTGTGTTCTTAGCAAAGTGGGGGGGTTACAACTGGTCCCCTTGGCCTGAAGGGAGGGAGTATTTGATGGCTTGAAGAACAGAGAGAGACAGAGAGAGAGTATTTGATTTTTGAATGTACAGCTGGGAAGGAGGGGACCTGCGCTGATAATGACTGATCATGATCATGGATTATTATCAATA



gi|86902087|gb|CI300326.1|CI300326 CI300326 Oryza sativa (japonica cultivar-group) etiolated shoot Oryza sativa Japonica Group c

GGATTTTCGCATGCGGTTGTG
||||||| |||||||||||||
CCTAAAAACGTACGCCAACAC

EST sequence (targeted fragment marked with yellow):
AACCCAAAGAGAAAAGAGGGGGTCTAAGAAATGTATCACTCTATCGTGTATATTGTACAGCAGGGTGAGAGGTAAAGGATGCAGAGAACCTTACATATCCTTCTCATCTCTGCTTCCCTGCTTCAAGTCTCCAAGTACCAGTAAAGCTGCAGCCTAGCTAATTGAGATAGCCCAAGTTGTTAGACACTTGTGATGCACCCATGGAGGTGATAACTTATTTAATAAATTGATTTGTCTTAATTAGCGTAGTGCATGATCAAATGCAAGTAAGCAAGCCAAACTAAAAAAATCATTTTTGCAAGCGGCCAAATGTGATTTTTGCATGCGGCGAGCACAACCGCATGCAAAAATCCTATTTATGCAGCCCG



gi|88273391|gb|CI393797.1|CI393797 CI393797 Oryza sativa (japonica cultivar-group) seed Oryza sativa Japonica Group cDNA clone J

GGATTTTCGCATGCGGTTGTG
||||||| ||| |||.||.||
CCTAAAATCGTCCGCTAATAC

EST sequence (targeted fragment marked with yellow):
AAACAAGTCAATACATAATCGCCTGCTAAAATCCATTACTAGTAGTAGATAGCAAACTACACCATGTTCTTTTCATCAACCGCACACATAAATGTGAAATATATTAATTCATCAGCTATATGCAAAAACAATAACATAAGACAAGATAAGTTACAATACAGAACTGGCTACATACTAAACCAATGCTTTTCCAAGCCACAAGAGTCGACCTTTACGCATTGCAAGGTTTAGTAGACTTCAATGAAATTCCAGTGAAAAACTCATGAGAAAAATGAACTCTTTTATCACCAGTGCAGAAAATCTTACAAGATGTAATGCAATCAGAATCATTTTGACAGGAGCAGTACCTAAGGCTCACGGTGTTTGGCTGGTGTGTTTGGCTTGGAGCTGGGTCTAGAGCTCGACGCGGTGCTACCAGCTGTGCCTAATGACACGATTGCCCCAGAACCTGCTGAACATGCCT



gi|88987611|gb|CI034508.1|CI034508 CI034508 Oryza sativa (japonica cultivar-group) etiolated shoot Oryza sativa Japonica Group c

GGATTTTCGCATGCGGTTGTG
|||||||||||. ||||| |
CCTAAAAGCGTGGGCCAAGCC

EST sequence (targeted fragment marked with yellow):
CTTTCCAAAGAACATGTCTTTCTTACTGGTTGGGTTTCTTCTTCACAAAATAAGAGAGGGATTACATCGGAAAAAAAATGAATGAAGTATGAAACCCAAAGTACAACAAAGACTCGGTTTCTATTTCTTCTTCCCAGCCTTGCCCTCCTTTCTTCTGACGATCTCATCGGCATACCGGATGCCCTTCCCCTTGTATGGTTCAGGCGGCCTCCACTTCTTTATGGAAGCAGCGAATTGACCGATCTCGCTCTTGTCGTAGCCACTCACAATGATCCTGGTGTTCTCTTCCACCTTAACTTTCAGGCCTTCTGGAACAGCCATCCGAACCGGGTGCGAAAATCCCAGGTTCATCACAAGATCTTTACCCTCCACCGCTGCACGGTATCCAACCCCAACTAGCTGAAGCTTCTTATCAAACCCCTTTGACACACCTACGATGATGTTGTCAGTCAGGGTCCTGAAAAGGCCATGCATCTGGTTTGCCCTTTGGGTCTCCACAGTCTTGGAAACTCTCAGCTTACCAGATTCTTCTTTCAC



gi|88212828|gb|CI210679.1|CI210679 CI210679 Oryza sativa (japonica cultivar-group) same as Lib 33(supermix) Oryza sativa Japonic

GGATTTTCGCATGCGGTTGTG
|||||||||||||||||||||
CCTAAAAGCGTACGCCAACAC

EST sequence (targeted fragment marked with yellow):
TTTTTTTTTTTGCTGACTAAAACGACACGTTAGTGAAACCAACACTACTACAAAACTGGTTTTTACATACGGACGAAACTGATTGTCGCATGCGGTTGCTCCAGCCGGAAGCGTGACAAGGTCTGTGAAAATCGGAGTTTTTCCGTGCGGCCAGCACAACCGCATGCGAAAATCCGCTTAAGCCGATTGCATGCAAAAAAGAAAAAGCGCGAAAAAAAATAAAATTCCACAAGAAAAAACTCTAGCCCCGCCGCCGTCGCCATCGCTTCCGTCATCGCCATCGCCAGCCGGCCGGATCCACGGCTGACGGATCCGCCACCCAGCGACCTCTGGCCGTCGGGATCGAAGAAGATGAGGGAGAGGGAGGAGAGGCGGCGGGATCCACGAGCTTGCCGCAGCCGCCGACGTCACAATCGCCGTAGTCACGCCACACCATCGCCTCAGCTGCAGCCGCTCCTGAGGGCGGCGCCACCGAATCCGCCGCCCGCCGTCGCTGCTCACTCCCACCGACATTGCTGTTCCCGAGGTCGGGGGCGGTGGATCTGCGCGTCTCCGTCGCCCGTGAGGGCGT



gi|112786250|gb|EE592359.1|EE592359 NEW_RNG-00075-F11-M13F Rice mixture of leaf, root, panicle Oryza sativa Japonica Group cDNA,

GGATTTTCGCATGCGGTTGTG
|||||||||| ||||...||
ACTAAAAGCGTCCGCCGGTAC

EST sequence (targeted fragment marked with yellow):
TGCCGCCGCGACGACGACGATGACGCTGCCTGCATCAGAGGAGGGGAGGGGAGGTGGTGGCGCGACCAGAGGGGAGGGCCCCTCCCTATCCTCTCCCACAGCTCTACTCCTCCGCGCCCGGCTGCGACGACGACGACGATGACTACGCCGCCGCCGCCTGGATTCGAGGAGGGGAGGGGAGGCCGCCATCGGCCGGAGGGAGAGGTCAGCGGCACTGCCGGCGGGGTGGTAGCGACGGATTTTTTTTTATTCGCTAAAAATATTTTTGCATGCGGGTGGTTCTACCGCCTACGAAAATAGATGGCGCCTACAAAAATGATTTTTGCAGACGGATTGCATGGCCGCCTGCGAAAATCATCTATTTCCGTAGGCCTTT



gi|88287983|gb|CI512660.1|CI512660 CI512660 Oryza sativa (japonica cultivar-group) 2 nuclei stage anther Oryza sativa Japonica G

GGATTTTCGCATGCGGTTGTG
||||||||.|||||||| |.|
CCTAAAAGTGTACGCCACCGC

EST sequence (targeted fragment marked with yellow):
AATTTCTGACAGGGTTTAATCGCATTTCCCTGTAGGTTTTCCGTTATAGGACAGATCCTGATTCGTATTCAATAGCCACGTCTATCATAGTATCACGTTACATACACCTACTACAGCATATGTTTCTTCCATACGGCTGACAANCATCTTCCCATGCGGTAAATCGTCTGTAAAAATCACCCTTTTTGCATGCGGGCGGCGCCACCGCATGTGAAAATCCTATTTTCGCATGCGGTTGCTTATACCGGCCGNATGCCAAA



gi|88438730|gb|CI546212.1|CI546212 CI546212 Oryza sativa (japonica cultivar-group) root of seedling gamma-irradiated (4min), aft

GGATTTTCGCATGCGGTTGTG
||||||| ||| |||.||.||
CCTAAAATCGTCCGCTAATAC

EST sequence (targeted fragment marked with yellow):
ACATAATCGCCTGCTAAAATCCATTACTAGTAGTAGATAGCACACTACACCATGTTCTTTTCATCAACCGCACACATAAATGTGAAATATATTAATTCATCAGCTATATGCAAAAACAATAACATAAGACAAGATAACTTACAATACAGAACTGGCTACATACTAAACCAATGCTTTTCCAAGCCACAAGAGTCGACCTTTACGCATTGCAAGGTTTAGTAGACTTCAATGAAATTCCAGTGACAAACTCATGAGAAAAATGAACTCTTTTATCACCACTGCAGAAAATCTTACAAGATGTAATGCAATCAGAATCATTTTGACAGGAGCAGTACATCAGGCTTCCGCTGCTTGCCTGGTGTGTTTGGCTTGGAGCTGGGTCTAAAGCTCGACGCGGTG



gi|109711812|gb|CI028982.1|CI028982 CI028982 Oryza sativa (japonica cultivar-group) etiolated shoot Oryza sativa Japonica Group

GGATTTTCGCATGCGGTTGTG
|||||||||||. ||||| |
CCTAAAAGCGTGGGCCAAGCC

EST sequence (targeted fragment marked with yellow):
TTTTGCTTATCAATTGTTCATCATGTATATATTTGCTGGGAGTTCTTGGTAGCATCGCAATCACGCTAAGCAGACCATGTGTTGATGAAAACAGTTTCATGTTTCATCGCATCTCTACAAGTCACGGAAGATCCAAAGAACATGTTCTTTCTTACTGGTTTGGTTTCTTCTTCACAAAATAAGAGAGGGATTACATCGGAAAAAAAATTGAATGAAGTATGAAACCCAAAGTACAACAAAGACTCGGTTTCTATTTCTTCTTCCCAGCCTTGCCCTCCTTTCTTCTGACGATCTCATCGGCATACCGGATGCCCTTCCCCTTGTATGGTTCAGGCGGCCTCCACTTCTTTATGGAAGCAGCGAATTGACCGATCTCGCTCTTGTCGTAGCCACTCACAATGATCCTGGTGTTCTCTTCCACCTTAACTTTCAGGCCTTCTGGAACAGCCATCCGAACCGGGTGCGAAAATCCCAGGTTCATCACAAGATCTTTACCCAGTAGGCCAACAGTGCTCGAGGAATTCCGCAGCTTTTAGAGCAGAAGTAACACTTCCG



gi|88486751|gb|CI424022.1|CI424022 CI424022 Oryza sativa (japonica cultivar-group) 4th leaf leaf 1mM ACC(1-aminocyclopropane-1-c

GGATTTTCGCATGCGGTTGTG
|||||||||||. ||||| |
CCTAAAAGCGTGGGCCAAGCC

EST sequence (targeted fragment marked with yellow):
GGCATCGCAATCACGCTAAGCAGACCATGTGTTGATGAAAACAGTTTCATGTTTCATCGCATCTCTACAAGTCACGGAAGATCCAAAGAACATGTTCTTTCTTACTGGTTTGGTTTCTTCTTCACAAAATAAGAGAGGGATTACATCGGAAAAAAAATTGAATGAAGTATGAAACCCAAAGTACAACAAAGACTCGGTTTCTATTTCTTCTTCCCAGCCTTGCCCTCCTTTCTTCTGACGATCTTATCGGCATACCGGATGCCCTTCCCCTTGTATGGTTCAGGCGGCCTCCACTTCTTTATGGAAGCAGCGAATTGACCGATCTCGCTCTTGTCGTAGCCACTCACAATGATCCTGGTGTTCTCTTCCACCTTAACTTTCAGGCCTTCTGGAACAGCCATCCGAACCGGGTGCGAAAATCCCAGGTTCATCACAAGATC



gi|86523026|gb|CI163232.1|CI163232 CI163232 Oryza sativa (japonica cultivar-group) shoot and callus Oryza sativa Japonica Group

GGATTTTCGCATGCGGTTGTG
||||||||||||||||||..|
CCTAAAAGCGTACGCCAATGC

EST sequence (targeted fragment marked with yellow):
TAGGGATAATTTTAACATTTATCTTCTTGTTAATAATCGTACAATCACTACTAAAAAAGTGTTTTTGCATGCGAGCTAGAAGGATCTTTTCATGCGGTTGGTTGGTGCAACCGCATGGGCGAGCTCTTCTGCAAAAATCGCTCTTTGGCGTAACCGCATGCGAAAATCCATGCAATCGCATATACCGGCCGCATGCAAAAATAAATTCGGCAACAAAAAAATAAAATCCAAAAAACCCCCAAACCCTAGCCCGTCGCCGGACCCGTCGCCCCCGCCGCCCGCTGTCGTCGGCAGCACCAAATCGGCGCGGGGCAGCGCCGCCCGAGGAGGCCGCCACGGCGGCGTTGAGGGGGGGGGGGGAGGCGCCACTGCCGTCCAGATCCGCCGCCGCGCCGCCGTCGCGCATGGGAGGTCGGTGAAGGGAGGTCGCCGCCGTTGCTGAGCCCGCCGCTGCCGCGCCGGATGGGAGGTCGGGGAAGAGAG



gi|88204902|gb|CI202753.1|CI202753 CI202753 Oryza sativa (japonica cultivar-group) Panicles mixture of one, two, three weeks aft

GGATTTTCGCATGCGGTTGTG
||||||||.||||||||||.|
CCTAAAAGTGTACGCCAACGC

EST sequence (targeted fragment marked with yellow):
CTGACAGGTTTAATCGCATTTCCCTGTAGGTTTTCAGTTATAGGACAGATCCTGATTCGTATTTAATAGCCACGTCTATCATAGTATCACGTTACATACACTACTACAGATATGTTTTTTCCATACGGCTGAGAACCATCTTTCCATGCGGTAAATCGTCTGTAAAAATCACCCTTTTTGCATGCGGCCGGCGCAACCGCATGTGAAAATCCTATTTTCGCATGCGGTTGCTTATACCGGCCGCATGCGAAAATAAATTAAGCAAACAAAAAAAATCGAAAAAACCCTAAACCAAACCCTAGCCCGCCACCGGAGCGCCGCATCCACGCCGCACGCCGTCGCCGGCGGCGGATCCATCGCTCCCGCCAACCCCCGCCGTCGCCGGCGCCGGATCCGTCAGCGGCGGCACCGGATCCGTCACCCCCAACGCTCGGCGTCGTCATCGGCGGCAGATCCGTCGCCCCCGTCGCCTAGCGTCGTCACCGGCGGCGGATCCATC



gi|58661887|gb|CK050567.1|CK050567 44595rsiceh_13529.y1 Oryza sativa cv. PA64s panicle ferile cDNA library Oryza sativa Indica G

GGATTTTCGCATGCGGTTGTG
|||||||||||||||||.
GATAAAAGCGTACGCCAACGA

EST sequence (targeted fragment marked with yellow):
GGAATTTATTTTCGCATGCGGCCGGTATAAGCAACCGCATGCGAAAATAGGATTTTCGGATGCGGTTGCGCCGGCCGCATGCAAAAAGGGTGATTTTTACAGACGATTTCGTCCATGCGGTTGGCACAACCGCATGGAAAGATGGTTCTCAGCCGTATGGAAAAACCATATCTGTAGTAGTGTCGCTTGCCTCGCCCTTGTGCTGCTGGTGCCGCCGCCTGCCCAAGCGGCGACGGTGGTCACCCACCTGCCGGGATTCGATGGTCCTCTACCCTTCTACCTGGAGACCGGGTATGTGGGCGTGGAGGAGGAGACCGGGACGGAGCTCTTCTACTACTTCGTGGAGTCGGAGCGGAGCCCTCACAGCGACGTCGTGCTGCTGTGGCTGTCGGGCGGGCCGCGGTGCTCTGTCTTCAGCGGCTTCGTGTACGAAATAGGCCCTGTAATGTTTGTCGCGGAACGTTACAGCGGCGGCACGGTTCCGCGGTTGGAGTATAATCCGTATTCCTGGACGAAGTTGGCAAGCATTCTCTTCGTGGACTCGCCCGTTGGTTCCGGTTTTTCATATGCGCACGATACCAAAGGTTATGATGTTGGAGACATATCATC



gi|87010030|gb|CI277531.1|CI277531 CI277531 Oryza sativa (japonica cultivar-group) mixed shoot (Normalized Library) Oryza sativa

GGATTTTCGCATGCGGTTGTG
||||||| ||| |||.||.||
CCTAAAATCGTCCGCTAATAC

EST sequence (targeted fragment marked with yellow):
ACATAATCGCCTGCTAAAATCCATTACTAGTAGTAGATAGCACACTACACCATGTTCTTTGGATCAACCGCACACATAAATGTGAAATATATTAATTCATCAGCTATATGCAAAAACAATAACATAAGACAAGATAACTTACAATACAGAACTGGCTACATACTAAACCAATGCTTTTCCAAGCCACAAGAGTCGACCTTTACGCATTGCAAGGTTTAGTAGACTTCAATGAAATTCCAGTGACAAACTCATGAGAAAAATGAACTCTTTTATCACCACTGCAGAAAATCTTACAAGATGTAATGCAATCAGAATCATTTTGACAGGAGCAGTACATCAGGCTTCCGCTGCTTGCCTGGTGTGTTTGGCTTGGAGCTGGGTCTAGAGCTCGACGCGGTGCTACCAGCTGTGCCTACTGACACGATTGCCCCAGAAGCTGCTGCAGCTGCCTCCTTGGCAGCCTTGCGTGCGCTTTTGTCGAGCTCGATCAAGCTACGGGACGCCAAGATAGCCTGTGGCACAAGCTCATGACACGCGCGGGCATAGACAACCCGCACAGCTTCTGCGGCGGTATCCCGCACCTCCGTCGGATTCAGCGGAGCTAACAGGCAGTGACCAAGAACTCTCATCACTGGCTGTAGAAGCTCCCA



gi|87019453|gb|CI281954.1|CI281954 CI281954 Oryza sativa (japonica cultivar-group) supermix Oryza sativa Japonica Group cDNA clo

GGATTTTCGCATGCGGTTGTG
||||.|||.||||| ||||.|
CCTAGAAGTGTACGGCAACGC

EST sequence (targeted fragment marked with yellow):
TTTATATTTGAGTCCTTTAATTACTTATATTTATGGTCGGTTCTTTACATGCGGACGAGGAGGATCTTTGCCCCAACCGCATGGGGGAGAAGGTATGCAAAAATCGCTCTTCTTACATGTGGCCGGCGCAACGGCATGTGAAGATCCTATTTTCGCATGCGGTCGCTTATACCGGTCGCATGCAAAAATAAATTCGGCAAACAAAAAAAATAAAATCCAAAAAACCCCCCTAACCCTAGCCCGCCGCCGCACGCCGTCGCCGGATCCGTCGGCGGCGGCACCGAATCGGCGGTCGAGGCGGGGGTATGCGCCGCGCCGTCGAGGAAGGGAGGCCGCCGCCGCCGGTGCCGAGCCCGCAGCGCGCCCGCCGTCCAGACCCGCCGACCGCCGCTGCCGTCGTCGTCTCGCCATGCCCGCTGCCGTCGAGGAAGGGAGTGCCGTGCATGGAGGTCGGGGAAGGCCG



gi|109711584|gb|CI013189.1|CI013189 CI013189 Oryza sativa (japonica cultivar-group) etiolated shoot Oryza sativa Japonica Group

GGATTTTCGCATGCGGTTGTG
|||||||||||. ||||| |
CCTAAAAGCGTGGGCCAAGCC

EST sequence (targeted fragment marked with yellow):
GCTTATCAATGTATCATCATGTATATATGTTGCTGGGAGTTCTTGGTAGCATCGCAATCACGCTAAGCAGACCATGTGTTGATGAAAACAGTTTCATGTTTCATCGCATCTCTACAAGTCACGGAAGATCCAAAGAACATGTTCTTTCTTACTGGTTTGGTTTCTTCTTCACAGAATAAGAGAGGGATTACATCGGAAAAAAAATTGAATGAAGTATGAAACCCAAAGTACAACAAAGACTCGGTTTCTATTTCTTCTTCCCAGCCTTGCCCTCCTTTCTTCTGACGATCTCATCGGCATACCGGATGCCCTTCCCCTTGTATGGTTCAGGCGGCCTCCACTTCTTTATGGAAGCAGCGAATTGACCGATCTCGCTCTTGTCGTAGCCACTCACAATGATCCTGGTGTTCTCTTCCACCTTAACTTTCAGGCCTTCTGGAACAGCCATCCGAACCGGGTGCGAAAATCCCGGGTTCATCACAAGATCTTTACCCTCCACCGCTGCACGGTATCCAACCCCAACTAGCTGAAGCTTCTTATCAAACCCCTTTGACACACCTACGATG



gi|117215427|gb|CT844724.1|CT844724 CT844724 Oryza sativa (indica cultivar-group) cv. Guang Lu Ai 4 Oryza sativa Indica Group cD

GGATTTTCGCATGCGGTTGTG
||||||| |||.| .|||||.
CCTAAAAACGTGCTTCAACAT

EST sequence (targeted fragment marked with yellow):
AATAATAAAGATCATGCTTTACAACTTCGTGCAAAAATCCTACTCCCAACTCCTCTCGCGCTGCCTCTTCAACTACGGCGAGCTTACCTTCACAACCAGTCTCCAAGTCCAAAGCGAGTTCCCCCGCGTCCCCACCTTCCGTCTCCTCGATCTCGATGGTAACCTCCTCGACAACAAAACCAAATACGATACATAACTACTCACCAAAATCCTGAAGACGATGGTATTTGTTGACGAAATGGATTCCATCCTCCTCAAAGTAAAGGGACAAGGAAAAATATCTTTCTACATGACCTCTTTCGGAGAGCACGCCTGTATCGTAGGATCAGCAGCCGCACTTAAAGCCGAAGATTTGGTGTATACTCAATATAGAGAGCAAGGTGCCCATATTTGGAGAGGATTTACCATTGAAAATATTATCAATCAATGTATTGGTAACATCAAGGATGCAGGAAAGGGAAGGCAGATGCCAGTTCACTACGGTAGTAAGGAACTTAACAATGTCACTGTATCATCTCCTCTCACCACACAAGTTCCCCAAGCAGCTGGATCTGGTTACGCTTTTAGAACAGCAGGATAAAGCAAAGTCGCCGCTTGCTATCTCGGTTAAGGAGCAGCCAGTGAAGGTGATTTTCCAACTGCCTTGAACTTTGCCGCCACCCTTAACTGCCAAACCCTCTTCCTCCTCAGAAATAATAAATACGCTATCTCAACCCCATCAGAAGATCAATATATCTCAGACGGTGTCATTCCTCGAGCAATC



gi|40489078|gb|BX899286.1|BX899286 BX899286 Oryza sativa library (Han B) Oryza sativa cDNA clone p581g06p3, mRNA sequence

GGATTTTCGCATGCGGTTGTG
||||||| ||| |||.||.||
CCTAAAATCGTCCGCTAATAC

EST sequence (targeted fragment marked with yellow):
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTTTTTTTTTGGTAGTAAGGAACATCAAATTAATATATGTTCGGTAAGAAATGCATAAAACAAGTCAATACATAATCGCCTGCTAAAATCCATTACTAGTAGTAGGTAGCACACTACACCATGTTCTTTTCATCAACCGCACACATAAATGTGAAATATATTAATTCATCAGCTATATGCAAAAACAATAACATAAGACAAGATAACTTACAATACAGAACTGGCTACATACTAAACCAATGCTTTTCCAAGCCACAAGAGTCGACCTTTACGCATTGCAAGGTTTAGTAGACTTCAATGAAATTCCAGTGACAAACTCATGAGAAAAATGAACTCTTTTATCACCACTGCAGAAAATCTTACAAGATGTAATGCAATCAGAATCATTTCGACAGGAGCAGTACATCAGGCTTC



gi|117237379|gb|CT861881.1|CT861881 CT861881 Oryza sativa (indica cultivar-group) cv. Guang Lu Ai 4 Oryza sativa Indica Group cD

GGATTTTCGCATGCGGTTGTG
|.||.|||||||| | |||.|
CTTAGAAGCGTACCCAAACGC

EST sequence (targeted fragment marked with yellow):
GTAGGCGCTTTTAGAGCGCAGTCGAGACCACGTATAATCACTTCCAAATCATGAATAAACGAATCGCAAAAACATTCGCACTTGGAGCTGCCTGCCTTTTCCCCCTCGCCTTTTTTGCTTAACAAAAAGAAGGACAAGCTTGGAGCTGGGGATTCGGGAGAAATGGATAACTTGGGCTTGGATCATAAGCAAACTACTCATTACCACATCAAATTAAAGGTGTTTCGTTCGTGGATATCGATACAAAACGCTCAATCTCCGCAGGTGTTACAAAAGATGGTGAACTTTTCACCTGGGGCAAGAATCGCAATGGAGTGCTTGGACATTATCCGCCTAATCTGAATGTCCTTGTGCCTCGACGTGTAGATCTACAGCAAAGAGTCGCATAAGTAAGCTGTGCATACCAAAATCTTTGTGTAATCACCTAAAAACGATAATCTCTTGTTTGCGGATTACATCATATCAATACCTCTTACAGATCAAGTAAAACCAGCACAACCTGAAGAGCGGAGTCATAAAGATACCTCCATCAAACGGACACATCCAATATTTTAAGTATGCGCCCATGTCTACAGCGTGCCATAAACAGCCTGATTTCACGGGGAAAGCCTTTGTGACAAGGTATGCATTCCAAAAAGCCGCTGACCGAAAAGAACCGTCAGCGCAAGGAGGTCAAAACAAACGAGGAATTTAAAGGAGCTGAGAGATACCGCCACCATTCGGGGCCACCGCAAACCCATGCGAAGATTCTTTCCTGGAGGGAGGACACTTCGCCCTCCGAGTAATTCAGGTATGGTGCTCGTCTCTGCGGAACTCGGCGACACCCCAAGAACAGCGAGAAGCATGGCGGCGAGGCGCCTGAAGGCAGGACCGACGCGAAGCCACTGCTACCACCCGAGACACAGGCTGGGAAGCGAACACCTTTGTCTATTCTGCTTTGAAAATTGTATGACAGAGGCAACAGTGAGGGACACAGAAGACGGTAAGTATTCAAATAAACCTCGAGATGGGGAGAAAGAGCAGTGAGGGCGAAACGGGTAAACCCGGCTCCAGGCAGTACCACTTACCACCT



gi|44676557|gb|CR289991.1|CR289991 CR289991 Oryza sativa library (Han B) Oryza sativa cDNA clone y726c05p3, mRNA sequence

GGATTTTCGCATGCGGTTGTG
|||||||||||. ||||| |
CCTAAAAGCGTGGGCCAAGCC

EST sequence (targeted fragment marked with yellow):
TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGCAAAAAAAAAAGCAAATGCTTATCAATTGTATCATCATGTATATATGTTGCTGGGAGTTCTTGGTAGCATCGCAATCACGCTAAGCAGACCATGTGTTGATGAAAACAGTTTCATGTTTCATCGCATCTCTACAAGTCACGGAAGATCCAAAGAACATGTTCTTTCTTACTGGTTTGGTTTCTTCTTCACAAAATAAGAGAGGGATTACATCGGAAAAAAAATTGAATGAAGTATGANAACCCAAAGTACAACANAAGACTCNGGTTTCTACTATTCTTCTTCCCANGCCTNNTGCCCTCCTTTCTTCTGACGAATCTCATCNGGCATACCGAGATGCCCTTCCCCTTGATATGGTTCAGGCGGACTCCACTTCTTTATGGAAGCAGCGAATTGACCGATCTCGCTCTTGTCGTAGCCACTCACAATGATCCTGGTGTTCTCTTCCACCTTAACTTTCAGGCCTTCTGGAACAGNCATCCGAACCGGGTGCGAAAATCCCAGGTTCATCACAAGATCTTTACCCTCCAACGGTGCACGGTATCCAANCCCAAATAGCTGAAGCTTCTTATCAAAACCCTTTGTAAAACCTACGATGATGTTGTCCGTCAGGGTCCTGAAAAGGGCATGCATCTGGTTTGACCCTTTGGGGTCCACAGAGTGTGAAAAACTCTAGTTAACAAAATTTTTTTAACCAATTTACTTCACTGGATAGTTAAGGAAATCTCTAATGGACATAANTTAACAATGTCTCTAGTGAGGCATTATAGAATCACAGGTATCCAACAAAACTCGGACCAGAGGTAGAAACAATGCCCGGTAACAACAATAGGTCCAACACCACATACACGAACAAGCAGACATACACAAAGAGCAACACAAGGAACCGAACCAACACGAACCACATCCACGGACACACACAAGAGAAAAACAGAAAAAAACAGCACTGAACAGTGACGCAGAACN



gi|86535148|gb|CI175354.1|CI175354 CI175354 Oryza sativa (japonica cultivar-group) supermix Oryza sativa Japonica Group cDNA clo

GGATTTTCGCATGCGGTTGTG
|||||||||||||||||||||
CCTAAAAGCGTACGCCAACAC

EST sequence (targeted fragment marked with yellow):
TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTACTACAAAACTGGTTTTTACATACGGACGAAACTGATTGTCGCATGCGGTTGCTCCAGCCGGAAGCGTGACAAGGTCTGTGAAAATCGGAGTTTTTCCGTGCGGCCAGCACAACCGCATGCGAAAATCCGCTTAAGCCGATTGCATGCAAAAAAGAGAAAGCGCGAAAAAAAATAAAATTCCACAAGAAAAAACTCTAGCCCCGCCGCCGTCGCCATCGCTTCCGTCATCGCCATCGCCAGCCGGCCGGATCCACGGCTGACGGATCCGCCACCCAGCGACCTCTGGCCGTCGGGATCGAAGAAGATGAGGGAGAGGGAGGAGAGGCGGCGGGATCCACGAGCTTGCCGCAGCCGCCGACGTCACAATCGCCGTAGTCACGCCACACCATCGCCTCAGCTGCAGCCGCTCCTGAGGGCGGCGCCACCG



gi|88439926|gb|CI543843.1|CI543843 CI543843 Oryza sativa (japonica cultivar-group) root of seedling gamma-irradiated (4min), aft

GGATTTTCGCATGCGGTTGTG
||||||| ||| |||.||.||
CCTAAAATCGTCCGCTAATAC

EST sequence (targeted fragment marked with yellow):
ACATAATCGCCTGCTAAAATCCATTACTAGTAGTAGATAGCACACTACACCATGTTCTTTTCATCAACCGCACACATAAATGTGAAATATATTAATTCATCAGCTATATGCAAAAACAATAACATAAGACAAGATAACTTACAATACAGAACTGGCTACATACTAAACCAATGCTTTTCCAAGCCACAAGAGTCGACCTTTACGCATTGCAAGGTTTAGTAGACTTCAATGAAATTCCAGTGACAAACTCATGAGAAAAATGAACTCTTTTATCACCACTGCAGAAAATCTTACAAGATGTAATGCAATCAGAATCATTTTGACAGGAGCAGTACATCAGGCTTCCGCTGCTTGCCTGGTGTGTTTGGCTTGGAGCTG



gi|87005827|gb|CI316246.1|CI316246 CI316246 Oryza sativa (japonica cultivar-group) shoot Oryza sativa Japonica Group cDNA clone

GGATTTTCGCATGCGGTTGTG
|||||||||||. ||||| |
CCTAAAAGCGTGGGCCAAGCC

EST sequence (targeted fragment marked with yellow):
CCAAAGAACATGTTCTTTCTTACTGGTTTGGTTTCTTCTTCACAAAATAAGAGAGGGATTACATCGGAAAAAAAATTGAATGAAGTATGAAACCCAAAGTACAACAAAGACTCGGTTTCTATTTCTTCTTCCCAGCCTTGCCCTCCTTTCTTCTGACGATCTCATCGGCATACCGGATGCCCTTCCCCTTGTATGGTTCAGGCGGCCTCCACTTCTTTATGGAAGCAGCGAATTGACCGATCTCGCTCTTGTCGTAGCCACTCACAATGATCCTGGTGTTCTCTTCCACCTTAATTTTCAGGCCTTCTGGAACAGCCATCCGAACCGGGTGCGAAAATCCCAGGTTCATCAAAAGATCTTTACCCTCCACCGGTGCACGGTATCCAACCCCAACTAGCTGAAGCTTCTTATCAAAACCCTTTGACACACCTACGATGATGTTGTCAGTCAGGGTCCTGAAACAGGCATGCATC