| mature miRNA: GGTTGCACTTATTTTGGGACG species: Oryza sativa database: miRNEST The numbers on the right side of the alignments show a score calculated for them. When calculating the score, a mismatch is given a score of 1, bulge: 2, and wobble: 0.5. |
| Predicted miRNA targets | |||||||||
gi|86541765|gb|CI181971.1|CI181971 CI181971 Oryza sativa (japonica cultivar-group) root of seedlings Oryza sativa Japonica Group GGTTGCACTTATTTTGGGACG EST sequence (targeted fragment marked with yellow): ACGTAGATGAAATGAACTTTTTCGCAGCTGAAAAATGTCCCCAACTATGTGCAACCCAGGTAGAACTGGGAAAAAAAACACCAGGCTTATAAGTGTATTCGTGCATTAGTATTGTTTTCGTTATCAAATTATCATCACCGCTGACAATAAATTCACACGCTACAAGAAAATCATGGATATTAATGCACAGGGAAAACAGGAAAAAACATATTTTTGCCAGACACCAGCCAGCAAAACCTCAGACTGTTGCTCTGTTACAGTTGTCATACGTCCCCATCACTGCTTTCATCATCATCATACTGCACCAGAGAACCAAGCACGCCCTTGGTGGCATCTGGGGGCTTGTGATCTGCACTGTGCCCATTTGAAGGAAGCTCCTTCGCAGGAGGCTTATCTTCCCCATCTAACTTTGCTTTCTTCGCTTGTGGTTTCACCGAAATTATTACATTTTTCAGGAGTGCAGGTTGGCTCCTTTTTGCCTTAGGCTTGCTCTCCTCTGG | |||||||||
gi|88220518|gb|CI220078.1|CI220078 CI220078 Oryza sativa (japonica cultivar-group) Panicles mixture of one, two, three weeks aft GGTTGCACTTATTTTGGGACG EST sequence (targeted fragment marked with yellow): TACCCTGCAACGCAACCAACGCTACGCACAAGTCATCATATGATAGTCCGTCTTGTCAAGATGAGAGGAGCTACAACACCATTGGTTTTGGTTACAGGGTGGTGGACTGGTGATGACGCAAAATAGAGTACGCATCACAAAGATAAAGATGCTATGATCTCTTTTGTCCGCCCTTGCGCTCTTTCCTTCTCTTCAGGCCCATCCAGATCTCCAATGTTGTCATGATACTCCTCAAGTATATCCTTAACGTCATCCTTAGTCAGTTTGTTCTGTCTTAGAAGCAACTCTATTCTTGTTCTCATCTGTGAATTGCCAGAGTGCCATATATGCCCCAGAATAAGTGCAATTAACTGAAGTGTGTAAAGACCAGCTTCTAGCTTGCGATTGTAGCGCTCATCTT | |||||||||
gi|117219637|gb|CT852183.1|CT852183 CT852183 Oryza sativa (indica cultivar-group) cv. Guang Lu Ai 4 Oryza sativa Indica Group cD GGTTGCACTTATTTTGGGACG EST sequence (targeted fragment marked with yellow): ATCGATCTCTCGCATCTCTTCTCTCTGCCCTGGCTCTGGCTGGCCAGGTGGGTGCCCGTGTCCGGCCGGCCACCCAGCTGATCAGCTCTCCCCCCTACCTTCCCACACCAACGACTCTCCCCTCCGTCCTCAAATCTCCGCAGTCCGCACACCTGGCTCGCATCGCAGCTAGCTAGCTAGCTTGATCATCTCAGCTCAGCTGGTTGTTGGTTGTTGCGTCGCGCGCAACCTGTTGCTCTGTTCCCTCGAGGTGGCCATCGCCATGAGAGGACGCGGTGACGGAGCTCCATTGCCGGTGGTCATGTTCTTGGTGGTGGTGCTGCTGTTGGCGAACGAGGTGGTGACCTTGGGCTACGGCTGCAGAGCTCTCAAACAGGCGGACTGCGCGATGGCGGCCACGCCGAAGCACGGCGGCACGGTGCTGATGCGAGCGGCGGCGCCGCCCGGCCCCGGCGAGTCGAGGGCAGCGATGTACGGTGAGTCCAAGAGGCTGGTTCCCCAGGGCCCCAATCCGCTGCACAACTAGCATCCTATTCCTGCACCCCCTGCAACACGTACGTTTCCATGCGTGCAGACGGCTTCTCTCAGTTCTACACTTCTTTTCTTTTTACGTTCTCGTTTTGCTTCTCTTTTGGTTGTGCAGAAGAGCACACGCATACTACCTCCGTCCCAAAATAAGTGCAGTCATGGATATCCGTGTCCAACATTTGACCGTCTATCTTATTTGAAAAATTTAAAAATATTTAGTCACACATAAAGTACTATTCATATTTTATCATAATAAAAATACTAATAATAAAAAATTTTCAAATAAGACGAACGGTCAAATGTTAAACATGAATAGTACAAAACTACACTTATTTTAGGACGGAGGGAGTATCATACAGTTGACCAGTGCTGTAATTAGTTTAGCACGGCAAGGTCTCAACTCTCTCTCTCTCTCAACACACAAGATTGTTGTACTAGTGCCATTGTAATACCACAGAAGAAGAAAGGGCTGGAAACAGTGCAGTTTATCTTTCCTTTCAGTTTCAACCAACTTCAAAAAAAACAAATAAAAAAAAATTGAAAACTTTTTGGGTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGGGCCCGCGTTGGTGCCCCCCCGGGGGGGGGGGGGCCGCCGGCGCCCCCACCCAACTCCCCCCCCCCCAAATCAAAGGGGGGGAGGCATTTAAAATATTATAACA | |||||||||
gi|30227286|gb|CB965178.1|CB965178 NL17_C09 Drought stress (leaf) Oryza sativa Indica Group cDNA clone NL17_C09 3', mRNA sequenc GGTTGCACTTATTTTGGGACG EST sequence (targeted fragment marked with yellow): ATATTGCCGGATCATATGAAAGCCTCGAGATGGTACAGGTAGACACACCTAACCACTAGTAGTTTGTATGTGCGAATAATTGTTCCTCAATATGTGTCTGGGTTGCCCCTAGTTGAAATCAGGCTTCTCAGGGTAAGTGCAGCCAGAACGCTGGATGATAACATTTGCAGCATAGCAACCAGCCTTCACAGAGTCCTCAATGCTCTTTTGTTGAACCAATTGTGAGAGGAAGCCTCCAACAAAGGCATCACCAGCGCCATTGGTGTCAACAAGCTTCTCCTTTGGCAGTAGGATCACAGGGAATGTTTTCACCTGTCCATCCTCAGCGACAACTACTGGATCAGCACCTTGAGTAATCACGGCAATCCTCTTTTGTTTTCCAGAGGCCAATGGAAGCTGGGAAATCTTCAACGCGATCTCCTCAACATTCTCAGTCTCCCATCCACGGACTTTAGCAAAGATTCTTGCTTCTGTTTCGTTACCGAAGATGTAGTCCACAAACGGAAGAACCTTCTCCTGGGCATCACGGAAAAACTCACAGATAAAGGGTGCAGAGAGGTTCATCAGGAACACCTTGTTGTTAGCGGCAGCATGCTCAGCAACAAGCTGAATAGAATCTGGGGAGACCGTAAGGAAAAAGCCAGCAATGTAGATGTATTTTGCTTTCTCCACTAGTGCCCAGTTCTCCGGTTTCTTCAGATGCTCAGATTTGTAGCAGTTTGCTGCTGATAAGTTTGCAACCAGTGAT | |||||||||
gi|88508970|gb|CI436476.1|CI436476 CI436476 Oryza sativa (japonica cultivar-group) 14 days after transferring callus Oryza sativ GGTTGCACTTATTTTGGGACG EST sequence (targeted fragment marked with yellow): CTGAACGAATGTCATAATTAATTTATTTAAAAACAATAGTTTCATAACGAATGGCACCATCATATAAAGGATTTTGGGTGGACGTGACATATGCCTAGTACTACCTTCATCCTAAAATAAGTGCAGCCGTGGATATCCGTGCCCAACGTTCGACCGTCCGTCTTATTTGAAAAATTTGTGAAAAATGTGAAAATATTTAGTCACACATAAAGTACTATCCATGTTTTATCATCTAATAGCAATAAAAATACTAATCATAAAAAATTTCCAAATAAGACGAATGGCCAAACGTTAAATGTGAATAGTGCAAAACTGCACTTATTTGGGGACGGAGGGAGTATAACGAATCTGGACAGACAGTATGTCCAGATTCATTGTACTTGGATATGTTACATCTATTCAAAATCCCTTCTGTTATAAGACGGACTGGGAGTAGTCAGATATTTAAG | |||||||||
gi|58600653|gb|CK011181.1|CK011181 30949sicef_0454.z1 Oryza sativa cv. PA64s panicle sterile cDNA library Oryza sativa Indica Gr GGTTGCACTTATTTTGGGACG EST sequence (targeted fragment marked with yellow): AGGTAGAACACACCAAACCACTAGTAGGTTGGATGTGCGAATAATTGTTCCTCAATATGTGGCTGGGTTGGCCCGTAGTTGAAATCAGGCTTCTCAGGGTAAGTGCAGCCAGAACGCTGGATGATAACATTTGCGGCATAGCAACCAGCCTTCACAGAGTCCTCAATGCTCTTTTGTTGAACCAATTGTGAGAGGAAGCCTCCAACAAAGGCATCACCAGCGCCGTTGGTGTCAACAAGCTTCTCCTTTGGCAGTAGGATCACAGGGAATGTTTTCACCTGTCCATCCTCAGCGACAACTACTGGATCAGCACCTTGAGTAATCACGGCAATCCTCTTTTGTTTTCCAGAGGCCAATGGAAGCTGGGAAATCTTCAACGCGATCTCCTCAACATTCTCAGTCTCCCATCCACGGACTTTAGCAAAGATTCTTGCTTCTGTTTCGTTACCGAAGATGTAGTCCACAAACGGAAGAACCTTCTCCTGGGCATCACGGAAAAACTCACAGA | |||||||||
gi|88513478|gb|CI440984.1|CI440984 CI440984 Oryza sativa (japonica cultivar-group) 14 days after transferring callus Oryza sativ GGTTGCACTTATTTTGGGACG EST sequence (targeted fragment marked with yellow): CTGAACGAATGTCATAATTAATTTATTTAAAAACAATAGTTTCATAACGAATGGCACCATCATATAAAGGATTTTGGGTGGACGTGACATATGCTAGTACTACCTTCATCCTAAAATAAGTGCAGCCGTGGATATCCGTGCCCAACGTTTGACCGTCCGTCTTATTTGAAAAATTTGTGAAAAATTTGAAAATATTTAGTCACACATAAAGTACTATTCATGTTTTATCATCTAATAGCAATAAAAATACTAATCATAAAAAATTTTCAAATAAGACGAATGGCCAAACGTTAAATGTGAATAGTGCAAAACTGCACTTATTTTGGGACGGAGGGAGTATAACGAATCTGGACAGACAGTATGTCCAGATTCATTGTACTTGGATATGTTACATCTATTCAAAATCCCTTTTGTTATAAGACGGAGTG | |||||||||
gi|30227391|gb|CB965283.1|CB965283 NL19_C03 Drought stress (leaf) Oryza sativa Indica Group cDNA clone NL19_C03 3', mRNA sequenc GGTTGCACTTATTTTGGGACG EST sequence (targeted fragment marked with yellow): CGAGATGGTACAGGTAGTACACTCCTAACCACTAGTAGGTTGGATTTGCGAATAATTGTTCCTCAATATGTGTCTTGTTGGCCCCTAGTTGAAATCAGGCTTCTCAGGGTAAGTGCAGCCAGAACGCTGGATGATAACATTTGCAGCATAGCAACCAGCCTTCACAGAGTCCTCAATGCTCTTTTGTTGAACCAATTGTGAGAGGAAGCCTCCAACAAAGGCATCACCAGCGCCATTGGTGTCAACAAGCTTCTCCTTTGGCAGTAGGATCACAGGGAATGTTTTCACCTGTCCATCCTCAGCGACAACTACTGGATCAGCACCTNTGAGTAATCACGGCANATCCTCTTTTGTTTTCCANNGAGGCCAATGGANNAGCTGGNGAAATCTTCAACNNGCGATCTCCTCAACATTCTCAGTCTCCCATCCACGGACTTTAGCAAAGATTCTTGCTTCTGTTTCGTTACCGAAGATGTAGTCCACAAACGGAAGAACCTTCTCCTGGGCATCACGGAAAAACTCACAGATAAAGGGTGCAGAGAGGTTCATCAGGAACACCTTGTTGTTAGCGGCAGCATGCTCAGCAACAAGCTGAATAGAATCTGGGGAGACCGTAAGGAAAAAGCCAGCAATGTAGATGTATTTTGCTTTCTCCACTAGTGCCCAGTTCTCCGGTTTCTTCAGATGCTCAGATTTGTAGCGTTTGCTGCTGATAAGTTGCACCGTGATCCTTCTGATGTTGGAGCGCCGCGCTATTCCCTTAGTGAGGTATTTAGCGTGCCTGC | |||||||||
gi|88840574|gb|CI080028.1|CI080028 CI080028 Oryza sativa (japonica cultivar-group) ABA: Abscic Acid treated callus Oryza sativa GGTTGCACTTATTTTGGGACG EST sequence (targeted fragment marked with yellow): TTTTTTTTTTTTTTTTTTTTTTTTGATTTACAGGAGGTTGCAGATTATAGCATTCTGTCTTGTTGATCAACAGATAGGACTCATACGGAAACAACATTGTAATCCTGCGATGTTTTCTGCACTTGAATACTCTCTCCGTCTCATTATAAGTACAACCATAAGTATCCGCGCCCAATTTTGATCGTTCGTCTTATTTAAAATTTTTTTATAATTAGTATTTTTGTTGTTATGAGATGATAAAACATAAATAGTACTTTACTCGTGACTTATGTTTTTAAATTTTTTCAAAAAAATTTTAAATAAGACGGATGGTCAAAGTTGAACGCGGAAAAACATGCTGCACTTATTATAGAACGGAGGTAGTACTATGTAGTACCAATGCTGCGATAGTAATTTTTTTTAGCTCCTACGCGATCAAATGATTAGTCCTCCTCGGGATCGAAGTCCC | |||||||||
gi|88842032|gb|CI081288.1|CI081288 CI081288 Oryza sativa (japonica cultivar-group) ABA: Abscic Acid treated callus Oryza sativa GGTTGCACTTATTTTGGGACG EST sequence (targeted fragment marked with yellow): GATGCTACAATATGACCCTTATGGAGGTAATTTATAATGCATTCAGAGTTTCAGACACAGCAATTTGATTTGTAAATGCAGAAAGAGATGGCACGGTGGAATTGCAACTGAAGGGTCTTGCTCTGTATTGACTGAGTGGCATGATCCTTTCATATCGGTAGGAATTTTTAGTTCACTTTCCTGCCATGCCAAAGAGATAAGGCACTATACTCATCTATCCAAACATGCCTAGGGTGCACTAGAAATGTGCCTTGAGTAGTGGTGGAAATGTCTAAAAGCACTCGTCGCCTATAGTTATTCCTTTCTCAATATGCTGAAATGGCTCTAGTTGAAGTCGGGCTTCTCAGGGTAAGTGCAGCCTGAGCGTTGGATGATAACGTTTGCAGCATAACAAGCAGCTCTGACACATTCATCAATGCTCTTCTCCTGAACCAATTGAGAGAGAAAACCCCCCACAAAGGCATCG | |||||||||
gi|88553054|gb|CI483124.1|CI483124 CI483124 Oryza sativa (japonica cultivar-group) whole body 3mM SA(salicylic acid) for 1day Or GGTTGCACTTATTTTGGGACG EST sequence (targeted fragment marked with yellow): CATATGATAGTCCGTCTTGTCAAGATGAGAGGAGCTACAACACCATTGGTTTTGGTTACAGGGTGGTGGACTGGTGATGACGCAAAATAGAGTACGCATCACAAAGATAAAGATGCTATGATCTCTTTTGTCCGCCCTTGCGCTCTTTCCTTCTCTTCAGGCCCATCCAGATCTCCAATGTTGTCATGATACTCCTCAAGTATATCCTTAACGTCATCCTTAGTCAGTTTGTTCTGTCTTAGAAGCAACTCTATTCTTGTTCTCATCTGTGAATTGCCAGAGTGCCATATATGCCCCAGAATAAGTGCAATTAACTGAAGTGTGTAAAGAACAGCTTCTAGCTTGCGATTGTAGCGCTCATCTTCATCCATCTCTAGATCATCTAAATCAAGACTGTCAAGTNTT | |||||||||
gi|88265888|gb|CI376790.1|CI376790 CI376790 Oryza sativa (japonica cultivar-group) callus Oryza sativa Japonica Group cDNA clone GGTTGCACTTATTTTGGGACG EST sequence (targeted fragment marked with yellow): ATGAATGCTAGCCGCGCAATTGCGCGGGCCACCCAGCCTAGTTATATTACTAGTTTACAAAAAGAATACCCTGCAACGCAACCAACGCTACGCACAAGTCATCATATGATAGTCCGTCTTGTCAAGATGAGAGGAGCTAAAACACCATTGGTTTTGGTTACAGGGTGGTGGACTGGTGATGAGGCAAAATAGAGTACGCATCACAAAGATAAAGATGCTATGATCTCTTTTGTCCGCCCTTGCGCTCTTTCCTTCTCTTCAGGCCCATCCAGATCTCCAATGTTGTCATGATACTCCTCAAGTATATCCTTAACGTCATCCTTAGTCAGTTTGTTCTGTCTTAGAAGCAACTCTATTCTTGTTCTCATCTGTGAATTGCCAGAGTGCCATATATGCCCCAGAATAAGTGCAATTAACTGAAGTGTGTAAAGACC | |||||||||
gi|33820429|gb|CF336025.1|CF336025 JMT--05-O22.g1 AtJMT-overexpressing transgenic rice plasmid cDNA library (JMT) Oryza sativa J GGTTGCACTTATTTTGGGACG EST sequence (targeted fragment marked with yellow): TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGACCAAAACAACACACCAGATTGGCAATTGTGGCCTTATACCGAAAATAAAGTAAGGGTTGCAGCAGTGAAACAAAAATCACGGGAAAAAAATATTGGCCGGATCATATGGAAAGCCTCGAGATGGTACAGGTAGAACACACCAAACCACTATTAGGGTGGATGTGCGAATAATTGGTCCTCAATATGGGGGTGGGTTAACCCTAATTGAAATCAGGCTTCTCAGGGTAAGTGCAGCCAAAACGCTGGATGATAACATTTGCGGGATAACAACCAGCCTTCACAAAGTCCTCAATGCTCTTTTGTTGAACCAATTGTGAAAGGAAACCTCCAACAAAGGCATCACCAGCGCCATTGGTGTCAACAAGCTTCTCCTTTGGCAGTAGGATCACAGGGAATGTTTTCACCTG | |||||||||
gi|33677892|gb|CF306131.1|CF306131 HDA1--02-M14.g1 OsHDAC1-overexpressing transgenic rice lambda phage cDNA library I (HDA1) Ory GGTTGCACTTATTTTGGGACG EST sequence (targeted fragment marked with yellow): TTTCAGTAGTCAGTATGGACTGCAAATCTCCACCCCTGTACAGCCAATATCAAATTGCCTTTTTCAGTACAATGAGCTCCATGTCTTAAGGTATGAATTTGACATGGTGGGCTACAAACCTAGAACCATATGTATTTTGGGCTTGCAGTTGTTTTTTAGTGTATATAGAAGTTGAGAAGATTAGTATAGGTTCTACTATTGATCGTAGTGATAAATCTAAGAAGTAAAGCTATCTCTTGTGGGCTTTGTGGAAGGGAATGAGAGAAAATATGAGGTAGCATGTTTCTGGCCTTGGCTGGAGAGAGTACCAAAATAATTCACTGGTGCTGAGGCTATGAGCTATGTCCAATTATTCTTCCTAATTAAAATATATTTTACAGTCCTTGTGGAGAACAACTCATCTAAATGTTACTAAATAAGTGCAGCCGTGGATATCCGTGCCCAACGTTTGACCGTCCGTCTTATTTGAAAAATTTATGAAAAATTTGAAAATATTTAGTCACACATAAAGTACTATTCATGTTTTATCA | |||||||||
gi|88507039|gb|CI434545.1|CI434545 CI434545 Oryza sativa (japonica cultivar-group) callus 50ppm CuSO4 for 1 week Oryza sativa Ja GGTTGCACTTATTTTGGGACG EST sequence (targeted fragment marked with yellow): CTTTTCTGGCAAGCAGCAGCTTGTTAATGCCAACCAGTCAACCGATTACACAGAGAACGTACGGCTTGATTTACAGGAGGTTGCAGATTATAGCATTCTGTCTTGTTGATCAACAGATAGGACTCATACGGAAACAACATTGTAATCCTGCGATGTTTTCTGCATACTTGAATACTCTCTCCGTCCCATTATAAGTACAACCATAAGTATCCGCGCCCAATTTGGATCGTTCGTCTTATTTAAAATTTTTTTATAATTAGTATTTTTGTTGTTATGAGATGATAAAACATAAATAGTACTTTACTCGTGACTTATGTTTTTAAATTTTTTCAAAAAAATTTTAAATAAGACGGATGGTCAAAGTTGAACGCGGAAAAACATGCTGCACTTATAATAGAACGGAGGTAGTACTATG | |||||||||
gi|88240461|gb|CI239623.1|CI239623 CI239623 Oryza sativa (japonica cultivar-group) Shoot and root of germinating seeds Oryza sat GGTTGCACTTATTTTGGGACG EST sequence (targeted fragment marked with yellow): TTTTTTTTTTTTTTTTTTTTTTTTTCACAAGAGTAAATTTGGGGCATAAGATTTTATTGATGGTATAATAGTAATGACTTACACACTGTTTAATGACTTTACGTACTGTAGTTCTATGCTTCTATTGCTGTATGAGCATATACTATCTGTAAATCCTTAGTACACAGCAGGCAGCAGGATGCCAGGATAAACTCTTGTCTGCATGTCTGAGCTTGGACACCGATGGACTCACTCTAGCAATGAAAGTACAGTAGTAGTACACTTGAACTGACTCAGGAACCTTGTTCTATGGCTTGCCAGTAGACTCTGCAGCACTACACGCAACTCTCTCCATACCAATATAAGTGCAACCTAGCACGAATATGATATATTTTAGAACTACGAATCTAGATCGCTACCTATCTAGATTCGTAGTGGTAGAATATGTTACAGCCGTACTAAGTTACACTGGGATGGATGGAATAGCAAGCAACGGCAGCCAGCCGACCCGTTCTTGTAGATGCAGTGCTAATTCACCCAGACTC | |||||||||
gi|88849633|gb|CI089739.1|CI089739 CI089739 Oryza sativa (japonica cultivar-group) Cd treated callus Oryza sativa Japonica Group GGTTGCACTTATTTTGGGACG EST sequence (targeted fragment marked with yellow): TTGCAACTGAAGGGTCTTGCTCTGTATTGACTGAGTGGCATGATCCTTTCATATCGGTAGGAATCTTTAGTTCACTTTCCTGCCATGCCAAAGAGATAAGGCACTATACTCATCTATCCAAACATGCCTAGGGTGCACTAGAAATGTGCCTTGAGTAGTGGTGGAAATGTCAAAAAGCACTCGTCGCCTATAGTTATTCCTTTCTCAATATGCTGAAATGGCTCTAGTTGAAGTCAGGCTTCTCAGGGTAAGTGCAGCCTGAGCGTTGGATGATAACGTTTGCAGCATAACAAGCAGCTCTGACACATTCATCAATGCTCTTCTCCTGAACCAATTGAGAGAGAAAACCCCCAACAAAGGCATCGCCTGCACCATTGGTGTCAACAAGCTTTTCCTTGGGCAAAACGATAACAGGGAATGTTTTGACCTTTCCATCATCAGCCACAACTACTGGGTCACAGC | |||||||||
gi|60672911|gb|DN475600.1|DN475600 trse170 Rice SMART cDNA library Oryza sativa Indica Group cDNA 5', mRNA sequence GGTTGCACTTATTTTGGGACG EST sequence (targeted fragment marked with yellow): ACGACCCAGAGNGTTGAGGTTNGGTTGTATAACACACTAGGAGAGAGTCACAGAACCACTACAAGTAGTGCATCTCAGCACTNACCAAAGCACTCCATGTAGAACGGGTTTGTCAACATGCTGCATACCGATACCGATCGACTATCACAAGTAACGCATCCAACTCATGAGTCGATGTAGTAACAAACTATTCATAGCTGTACGACCTGCTGGGTTGCATGGTACATTCCAACATAAGTGTAGCCAGCGATCAAGCTAGTCATAGACTGATCAATCATGGAACTGTCAATACTCCGTCATGCTAGANAGGCTAAGTTAGACTAGTGTGTGAGCGTCAACAANGTAGAAATCCAAACACATTAGCATGTAATGATCAAAGCATCAACGATGTCAGCTGGATTGAGTACCATACTTCAGTCTAAGCGTAGGCGGAATACAACATAGTCTAGGTACATAGGCATATTCAGATAATCTAGTCATACGTACAAGTAGTACAAATCTG | |||||||||
gi|88258611|gb|CI361197.1|CI361197 CI361197 Oryza sativa (japonica cultivar-group) flower Oryza sativa Japonica Group cDNA clone GGTTGCACTTATTTTGGGACG EST sequence (targeted fragment marked with yellow): GGCAATTGTGCCTTATACCGAGAATAAAGTAAGGTTTGCAGCAGTGAAAAAAAAATCACGGCAAAAAAATATTGGCCGGATCATATGGAAAGCCTCGAGATGGTACAGGTAGAACACACCAAACCACTAGTAGGTTGGATGTGCGAATAATTGTTCCTCAATATGTGGTTGGGTTACCCCTAGTTGAAATCAGGCTTCTCAGGGTAAGTGCAGCCAGAACGCTGGATGATAACATTTGCGGCATAGCAACCAGCCTTCACAGAGTCCTCAATGCTCTTTTGTTGAACCAATTGTGAGAGGAAGCCTCCAACAAAGGCATCACCAGCGCCATTGGTGTCAACAAGCTTCTCCTTTGGCAGTAGGATCACAGGGAATGTTTTCACCTGTCCATCCTCAGCGACAACTACTGGATCAG | |||||||||
gi|88844873|gb|CI022227.1|CI022227 CI022227 Oryza sativa (japonica cultivar-group) green shoot Oryza sativa Japonica Group cDNA GGTTGCACTTATTTTGGGACG EST sequence (targeted fragment marked with yellow): TTAACACACCGATGGCAATTGTGCCTTATACCGAGAATAAAGTAAGGTTTGCAGCAGTGAAACAAAAATCACGGCAAAAAAATATTGGCCGGATCATATGGAAAGCCTCGAGATGGTACAGGTAGAACACACCAAACCACTAGTAGGTTGGATGTGCGAATAATTGTTCCTCAATATGTGGTTGGGTTAGCCCTAGTTGAAACCAGGCTTCTCAGGGTAAGTGCAGCCAGAACGCTGGATGATAACATTTGCGGCATAGCAACCAGCCTTCACAGAGTCCTCAATGCTCTTTTGTTGAACCAATTGTGAGAGGAAGCCTCCAACAAAGGCATCACCAGCGCCATTGGTGTCAACAAGCTTCTCCTTTGGCAGTAGGATCACAGGGAATGTTTTCACCTGTCCATCCTCAGCGACAACTACTGGATCAGCACCTTGAGTAATCACGGCAATCCTCTTTTGTTTTCCAGAGGCCAATGGAAGCTGGGAAATCTTCAACGCGATCTCCTCAACATTCTCAGTCTCCCATCCACGGACTTTAGCAAAGATTCTTGCTTCTGTTTCGTTA | |||||||||
gi|88390046|gb|CI590559.1|CI590559 CI590559 Oryza sativa (japonica cultivar-group) flower Oryza sativa Japonica Group cDNA clone GGTTGCACTTATTTTGGGACG EST sequence (targeted fragment marked with yellow): GTATATACTACTTCCGTCCCAAAATAAGTGCAGTCGTGGATATCTGTGTCTAATGTTTGACTGTCTGTCTTATTTAAAAAAATTATGAAAAAATTAATAAAATTAGTCACAAAAAGTATTATTCATGTTTTATCATCTAATAACAATAAAAATACTAATCATAAATTTTTTTAATAAGAGGAATGGTCAAACGTTGGACATGAAAGTGCAAAAGTGCTGATCGCACACAAAGCTGCTAGCTAGTAGTACCTCCACTTACCAGAAACCGGGTTAGCCCTGACGGCTAAAAAACGTCAAGAATAAACGAATGGAAGGGGATGCTTGATCCTGTAGCCCCATCTCAAGTGACGTGCAATATACTGTACATAAATGTGTACATGAACTTGAATTGTTGTATTATA | |||||||||
gi|88976823|gb|CI257545.1|CI257545 CI257545 Oryza sativa (japonica cultivar-group) same as Lib 23(supermix) Oryza sativa Japonic GGTTGCACTTATTTTGGGACG EST sequence (targeted fragment marked with yellow): TTCAAATCATTCAGAAAAGTCATGTTTTTCTTTTCTGGCAAGCAGCAGCTTGTTAATGCCAACCAGTCAACCGATTACACAGAGAACGTACGGCTTGATTTACAGGAGGTTGCAGATTATAGCATTCTGTCTTGTTGATCAACAGATAGGACTCATACGGAAACAACATTGTAATCCTGCGATGTTTTCTGCATACTTGAATACTCTCTCCGTCCCATTATAAGTACAACCATAAGTATCCGCGCCCAATTTTGACCGTTCGTCTTATTTAAAATTTTTTTATAATTAGTATTTTTGTTGTTATGAGATGATAAAACATAAATAGTACTTTACTCGTGACTTATGTTTTTAAATTTTTTCAAAAAAATCTTAAATAAGACGGATGGTCAAAGTTGAACGCGGAAAAACATGCTGCACTTATAATAGAACGGAGGTAGTACTATGTAGTACCAATGCTGCGATAGTAATTTTTTTTAGCTCCTACGCGATCAAATGATTAGTCCTCCTCGGGATCGAAGTCCCTAACCTTCACATCTGCGTCTTCCCCATACTGGATGCAGTTGTCGATGTGCGACAGCACATACTGAATGCTGCTCTCTTTTCTTAAGTCAAGTGGGATGAAATTCACCATGCTGTAATCATCAACCAGTTCAGCTAATGATTTGTTTAGCTTGCCAAAATTGGGTGCCATCTGTCGGTTCAGCTGTGACAA | |||||||||
gi|88556376|gb|CI486697.1|CI486697 CI486697 Oryza sativa (japonica cultivar-group) 3rd week immature panicle Oryza sativa Japoni GGTTGCACTTATTTTGGGACG EST sequence (targeted fragment marked with yellow): CGCAGCTGAAAAATGTCCCCAACTATGTGCAACCCAGGTAGAACTGGGAAAAAAAACACCAGGGTTATAAGTGTATTCGTGCATTAGTATTGTTTTCGTTATCAAATTATCATCACCGCTGACAATAAATTCACACGCTACAAGAAAATCATGGATATTAATGCACAGGGAAAACAGGAAAAAACATATTTTTGCCAGACACCAGCCAGCAAAACCTCAGACTGTTGCTCTGTTACAGTTGTCATACGTCCCCATCACTGCTTTCATCATCATCATACTGCACCAGAGAANCAAGCACGCCCTTGGTGGCATCTGGGGGCTTGTGATCTGCACTGTGCCCATTTGAAGGAAGCTCCTTCGCAGGAGGCTTATCTTCCCCAT | |||||||||
gi|88260752|gb|CI363045.1|CI363045 CI363045 Oryza sativa (japonica cultivar-group) flower Oryza sativa Japonica Group cDNA clone GGTTGCACTTATTTTGGGACG EST sequence (targeted fragment marked with yellow): ACAAAACAGACCATTTCTTTCCCTAACAATGCATCAAAACACTACACTGCAGCCTCCAAATTTATCCCAAAATCTCAGCTAAAGAAGCTAGTATCTACTACCTCCGTCCCAAAATAAGTGCAGCCATAGATATGCGTGCTCAGCGTTTTGACCATCCGTCTGTTTGAAAAATTTATAAAAAATATTTAAAAATTAGTCACACATAAAGTACTATTCATGTTTTATCATCTAATAACAATAAAAATACTAATCATAATCTTTTTTCAAATAAGACGAACGGTCAAATGTTGGACATGAACAGTGTTAAAACTGGACTTATTTTGGGACGGAGAGAGTAGCTAGCTAAACGCCCGGCTAGGCGGCTACTCTACCAGTACTGCTACAACCACCATGTCTAGGCTGATGTGCTGCTTGCTACTGCTGCTACTCCTCCGCGTTCATC | |||||||||
gi|33654525|gb|CF277139.1|CF277139 14ETL--02-I24.g1 Rice etiolated leaf plasmid cDNA library (14ETL) Oryza sativa Japonica Group GGTTGCACTTATTTTGGGACG EST sequence (targeted fragment marked with yellow): GCTGTCAACGATACGCTACGTAACGGCATGACATTGTTTTTTTTTTTTTTTTTTTTTGCCCAAAACAACACACCTATTGGCAATTGTGCCTTATTCTTAGAATAAAGGGAGGTTTGCAGCCCTGAAACAAAAATCACTTGTTAAAAAATATTGGCCGGATCATATGGAAAGCCTCGAGATGGTACTTTTTTAACACACCAAACCACTTTTTGGTTGGATGTGCGAATAAANGTTCCTCAATATGTGGTTGGGTTAGCCCTANTTGAAATCAGGCTTCTCAGGGTAAGTGCAGCCAGAACGCTGGATGATAACATTTGCGGCATAGCAACCAGCCTTCACAGAGTCCTCAATGCTCTTTTGTTGAACCAATTGTGAGAGGAAGCCTCCAACAAAGGCATCACCAGCGCCATTGGTGTCAACAAGCTTCTCCTTTGGCAGTAGGATCACAGGGAATGTTTTCACCTGTCCATCCTCAGCGACAACTACTGGATCAGCACCTTGAGTAATCACGGCAATCCTCTTTTGTTTTCCAGAGGCCAATGGAAGCTGGGAAATCTTCAACGCGATCTCCTCAACATTCTCAGTCTCCCAT | |||||||||
gi|29628277|gb|CB633288.1|CB633288 OSIIEb12A20.f OSIIEb Oryza sativa Indica Group cDNA clone OSIIEb12A20 5', mRNA sequence GGTTGCACTTATTTTGGGACG EST sequence (targeted fragment marked with yellow): GGCCGGTCTGGTCCTTGTGCACGTGACATCTACTACATCCGTCTCAAAATAAGTGCGGCCATAAGTTTCCACGCTCAACTTTGATCGTCCGTTCTACTTGATTTTTTTTATAATTAGTATTTTTATTGTTATGAAATGATAAAACGTGAATAGTACTTTGCTCGTGACTTATGTTTTTAATTTTTTTAAAAAAAATTAAATAAGATGAACAATCAAAGTTGGACATGGAAAATCATGGCTGCACTTATTTTGGGACAGAGGGAGTATTTGTTAATATATGAAATGATTAATTTTAATTTTGAATCCCACTATAGGGCTATGTAGTGTTAGTAGAAAATAATATAAATAATCGAAGTGATCATATATCTATTTATACTACAACCTCATTACATGGTAGTAGAAACGTGGAGCAATATTATTATAAGAAAAATGTGTGGAGAGACAATCATTATTTAGTAGTGACTTTTTTTTTTGCTTTTCGATGGAATATGAGCGATGTCATTGCCAGCGCAATGAATGACCTCGGATTGATCTAGCCATGATAAACATAAAAGATAAATTTGTCCCTCGTCATTGTATAAATAAATTGGATTGATCTAGCCATGAAAAACATAAAAGATAAATTTGTCCCTCGTCATTGTATAAATAAATTACTAACTTATTCTTAATAATGAACGGTTAATATTATTTTTATTGTAGTATAATACTACTTAGTANAGAGAGCATTGGAATCGTTCATTAGTTTTATTAGTGGTCTTTTTTAAAAAAAAATAAAACATAGATAGAAACTCACATGACCGCGACAACTAGAAGCTAGGTACTATGGGTATCGAGCGATCTCTCTCATCTC | |||||||||
gi|88376247|gb|CI533149.1|CI533149 CI533149 Oryza sativa (japonica cultivar-group) 5 days after pollination pistil Oryza sativa GGTTGCACTTATTTTGGGACG EST sequence (targeted fragment marked with yellow): ATGAATGCTAGCCGCGCAATTGCGCGGGCCACCAGCTAGTTATATTACTAGTTTANAAAAAGAATACCCTGCAACGCAACCAACGCTACGCACAAGTCATCATATGATAGTCCGTCTTGTCAAGATGAGAGGAGCTACAACACCATTGGTTTCGGTTACAGGGTGGTGGACTGGTGATGANGCAAAATAGAGTANGCATCANAAAGATAAAGATGCTATGATCTCTTTTGTCCGCCCCTGCGCTCTTTCCTTCTCTTCAGGCCCATCCAGATCTCCAATGTTGTCATGATACTCCTCAAGTATATCCTTAACGTCATCCTTACTCAGTTTGTCCTGTCTTAGAAGCAANTCTATTCTTGTTCTCATCTGTGAATTGCCAGAGTGCCATATATGCCCCAGAATAAGTGCAATCAACTGAAGTGTGTAAA | |||||||||
gi|88906138|gb|CI375210.1|CI375210 CI375210 Oryza sativa (japonica cultivar-group) callus Oryza sativa Japonica Group cDNA clone GGTTGCACTTATTTTGGGACG EST sequence (targeted fragment marked with yellow): GACCAAAAAAACACACCGATTGGCAATTGTGCCTTATACCGAGAATAAAGTAAGGTTTGCAGCAGTGAAACAAAAATCAGGGCAAAAAAATATTGGCCGGATCATATGGAAAGCCTCGAGATGGTACAGGTAAAACACACCAAACCAATAGTAGGTTGGATGTGCGAATAATTGTTCCTCAATATGTGGTTGGGTTAGCCCTAGTTGAAATCAGGCTTCTCAGGGTAAGTGCAGCCAGAACGCTGGATGATAAAATTTGCGGCATAGCAACCACCCTTCACAGAGTCCTCAATGCTCTTTTGTTGAACCAATTGTGAGAGGAAGCCTCCAACAAAGGCATCACCAGCGCCATTGGTGTCAACAAGCTTCTCCCTTTGGCAGTAGGATCACAGGGCAATGTTTTAACCGTGTCCATCTCCAGCGACAACTACTGGATCAGCACCTTGAGTAA | |||||||||
gi|86545295|gb|CI185501.1|CI185501 CI185501 Oryza sativa (japonica cultivar-group) root of seedlings Oryza sativa Japonica Group GGTTGCACTTATTTTGGGACG EST sequence (targeted fragment marked with yellow): TACGTAGATGAAATGAACTTTTTCGCAGCTGAAAAATGTCCCCAACTATGTGCAACCCAGGTAGAACTGGGAAAAAAAACACCAGGGTTATAAGTGTATTCGTGCATTAGTATTGTTTTCGTTATCAAATTATCATCACCGCTGACAATAAATTCACACGCTACAAGAAAATCATGGATATTAATGCACAGGGAAAACAGGAAAAAACATATTTTTGCCAGACACCAGCCAGCAAAACCTCAGACTGTTGCTCTGTTACAGTTGTCATACGTCCCCATCACTGCTTTCATCATCATCATACTGCACCAGAGAACCAAGCACGCCCTTGGTGGCATCTGGGGGCTTGTGATCTGCACTGTGCCCATTTGAAGGAAGCTCCTTCGCAGGAGGCTTATCTTCC | |||||||||
gi|89199046|gb|CI253120.1|CI253120 CI253120 Oryza sativa (japonica cultivar-group) Panicles mixture of one, two, three weeks aft GGTTGCACTTATTTTGGGACG EST sequence (targeted fragment marked with yellow): GACCAAAACAACACACCGATTGGCAATTGTGCCTTATACCGAGAATAAAGTAAGGTTTGCAGCAGTGAAACAAAAATCACGGCAAAAAAATATTGGCCGGATCATATGGAAAGCCTCGAGATGGTACAGGTAGAACACACCAAACCACTAGTAGGTTGGATGTGCGAATAATTGTTCCTCAATATGTGGTTGGGTTAGCCCTAGTTGAAATCAGGCTTCTCAGGGTAAGTGCAGCCAGAACGCTGGATGATAACATTTGCGGCATAGCAACCAGCCTTCACAGAGTCCTCAATGCTCTTTTGTTGAACCAATTGTGAGAGGAAGCCTCCAACAAAGGCATCACCAGCGCCATTGGTGTCAACAAGCTTCTCCTTTGGCAGTAGGATCACAGGGAATGTTTTCACCTGTCCATCCTCAGCGACAACTACTGGATCAGCACCTTGAGTAATCACGGCAATCCTCTTTTGTTTTCCAGAGGCCAATGGAAGCTGGGAAATCTTCAACGCGATCTCCTCAACATTCTCAGTCTCCCATCCACGGACTTTAGCAAAGATTCTTGCTTCTGTTTCGTTACCGAAGATGTAGTCCACAAACGGAAGAACCTTCTCCTGGGCATCACGGAAAAACTCACAGATAAAGGGTGCCGAGAGGTTCATCAGGAACACCTTGTTGTTAGCGGCAGCATGCTCAGCAACAAGCT | |||||||||
gi|88852687|gb|CI008880.1|CI008880 CI008880 Oryza sativa (japonica cultivar-group) etiolated shoot Oryza sativa Japonica Group c GGTTGCACTTATTTTGGGACG EST sequence (targeted fragment marked with yellow): ACCAAAACAACACACGATTGGCAATTGTGCCTTATACCGAGAATAAAGTAAGGTTTGCAGCAGTGAAACAAAAATCACGGCAAAAAAATATTGGCCGGATCATATGGAAAGCCTCGAGATGGTACAGGTAGAACACACCAAACCACTAGTAGGTTGGATGTGCGAATAATTGTTCCTCAATATGTGGTTGGGTTAGCCCTAGTTGAAATCAGGCTTCTCAGGGTAAGTGCAGCCAGAACGCTGGATGATAACATTCGCGGCATAGCAACCAGCCTTCACAGAGTCCTCAATGCTCTTTTGTTGAACCAATTGTGAGAGGAAGCCTCCAACAAAGGCATCACCAGCGCCATTGGTGTCAACAAGCTTCTCCTTTGGCAGTAGGATCACAGGGAATGTTTTCACCTGTCCATCCTCAGCGACAACTACTGGATCAGCACCTTGAGTAATCACGGCAATCCTCTTTTGTTTTCCAGAGGCCAATGGAAGCTGGGAAATCTTCAACGCGATCTCCTCAACATTCTCAGTCTCCCATCCACGGACTTTAGCAAAGATTCTTGCTTCTGTTTCG | |||||||||
gi|88268319|gb|CI378254.1|CI378254 CI378254 Oryza sativa (japonica cultivar-group) callus Oryza sativa Japonica Group cDNA clone GGTTGCACTTATTTTGGGACG EST sequence (targeted fragment marked with yellow): GACCAAAACAACACACCGATTTGGGAATTTGTGCCTTATACCGAGAATAAAGTAAGGTTTGCAGCAGTGAAACAAAAATCACGGCAAAAAAATATTTGGCCGGATCATATGGAAAGCCTCGAGATGGTACAGGTAGAACACACCAAACCACTACTATGTTGGATGTGCGAATAATTGTTCCTCAATATGTGGTTGGGTTAGCCCTACTTGAAATCAGGCTTCTCAGGGTAAGTGCAGCCAGAACTGCTGGA | |||||||||
gi|33692183|gb|CF320422.1|CF320422 HD--11-E24.g1 OsHDAC1-overexpressing transgenic rice plasmid cDNA library (HD) Oryza sativa J GGTTGCACTTATTTTGGGACG EST sequence (targeted fragment marked with yellow): TTGTGCCTTATACCGAGAATAAAGTAAGGTTTGCAGCAGTGAAACAAAAATCACGGCAAAAAAATATTGGCCGGATCATATGGAAAGCCTCGAGATGGTACAGGTAGAACACACCAAACCACTTTTTTGTTGGATGTGCGAATAATTGTTCCTCAATATGTGGTTGGGTTATCCCTAGTTGAAATCAGGCTTCTCAGGGTAAGTGCAGCCAGAACGCTGGATGATAACATTTGCGGCATAGCAACCAGCCTTCACAGAGTCCTCAATGCTCTTTTGTTGAACCAATTGTGAGAGGAAGCCTCCAACAAAGGCATCACCAGCGCCATTGGTGTCAACAAGCTTCTCCTTTGGCAGTAGGATCACAGGGAATGTTTTCACCTGTCCATCCTCAGCGACAACTACTGGATCAGCACCTTGAGTAATCACGGCAATCCTCTTTTGTTTTCCAGAGGCCAATGGAAGCTGGGAAATCTTCAACGCGATCTCCTCAACATTCTCAGTCTCCCATCCACGGA | |||||||||
gi|88830658|gb|CI078102.1|CI078102 CI078102 Oryza sativa (japonica cultivar-group) NAA treated callus Oryza sativa Japonica Grou GGTTGCACTTATTTTGGGACG EST sequence (targeted fragment marked with yellow): CATTCAGAAAAGTCATGTTTTTCTTTTCTGGCAAGCAGCAGCTTGTTAATGCCAACCAGTCAACCGATTACACAGAGAACGTACGGCTTGATTTACAGGAGGTTGCAGATTATAGCATTCTGTCTTGTTGATCAACAGATAGGACTCATACGGAAACAACATTGTAATCCTGCGATGTTTTCTGCATACTTGAATACTCTCTCCGTCCCATTATAAGTACAACCATAAGTATCCGCGCCCAATTTTGATCGTTCGTCTTATTTAAAATTTTTTTATAATTAGTATTTTTGTTGTTATGAGATGATCAAACATAAATAGTACTTTACTCGTGACTTATGTTTTTAAATTTTTTCAAAAAAATTTTAAATAAGACGGATGGTCAAAGTTGAACGCGGAAAAACATGCTGCACTTATTATAGAACGGAGGTAGTACTATGTAGTACCAATGCTGCGATAGTAATTTTTTTTAGCTCCTACGCGATCAAATGATTAGTCCTCCTCGGGATCGAAG | |||||||||
gi|300215864|gb|HO088490.1|HO088490 S273-T7promoter Subtracted cDNA library from Indica rice variety Suraksha Oryza sativa Indic GGTTGCACTTATTTTGGGACG EST sequence (targeted fragment marked with yellow): GTCAGGTAGAAACCCAAACCACTAGTAGGTTGGATGTGCGAATAATTGTTCCTCAATATGTGGCTGGGTTGGCCCTAGTTGAAATCAGGCTTCTCAGGGTAAGTGCAGCCAGAACGCTGGATGATAACATTTGCGGCATAGCAACCAGCCTTCACAGAGTCCTCAATGCTCTTTTGTTGAACCAATTGTGAGAGGAAGCCTCCAACAAAGGCATCACCAGCGCCATTGGTGTCAACAAGCTTCTCCTTTGGCAGTAGGATCACAGGGAATGTTTTCACCTGTCCATCCTCAGCGACAACTACTGGATCAGCACCTTGAGTAATCACAGCAATCCTCTTTTGTTTTCCAGAGGCCAATGGAAGCTGGGAAATCTTCAACGCGATCTCCTCAACATTCTCAGTCTCCCATCCACGGACTTTAGCAAAGATTCTTGCTTCTGTTTCGTTACCGAAGATGTAGTCCACAAACGGAAGAACCTTCTCCTGGGCATCACGGAAAAACTCACAGATAAAGGGTGCAGAGAGGTTCATCAGGAACACCTTGTTGTTAGCGGCAGCATGCTCAGCAACAAGCTGAATAGAATCTGGGGAGACCGTAAGGAAAAAGCCAGCAATGTAGATGTATTTTGCTTTCTCCACTAGTGCCCAGTTCTCCGGTTTCTTCAGATGCTCAGATTTGTAGCAGTTTGCTGCTGATAAGTTTGCAACCAGTGATCTTTCACCACCAACAACACAGACAGCACATGTGCCCGTGGGAGCAGCCTCATCCTCGTAGTAATGAGCAGTAACACCAGCAGCTTGGGCATTCTTCTTCATCTCCTCACCAAACTT | |||||||||
gi|87021958|gb|CI278125.1|CI278125 CI278125 Oryza sativa (japonica cultivar-group) mixed shoot (Normalized Library) Oryza sativa GGTTGCACTTATTTTGGGACG EST sequence (targeted fragment marked with yellow): TTTTTTTTTTTTTTTTTTTCCCAAGNTGACAATTTGGCATATATATTCAGCTAGCTGAGCATAGCATTGCAAATCACAAAGAGAAACACACAACCGGCTAGAATAGTGTCACCGAAAGCACTAGAAACATGGTAGTACTACTAAGTTGCTAACATATAGGCAACCATTCTACCCCCCAGACAGACATTATATTATTTCTACCACTCAAGCACCATGATTCCATCAAGCTAGCTAGCGATGGTTACTACTACTACCTCCTCCGTCCCAAAATAAGTGTAACCATAGATATTCGTGTCCAGTATTTTAACCATTCGTATTTGAAAATTTTATGAAAAAAATTAAAAATATTAGTCACACATAAATACTATTCATGTATTATCATATAACAACAATAAAAATACTAATTATAATTGTTTTTCAAATAAGACGAACGATCAAACGTTGAACATGAACAGTGCTAAAACTGCACTTATTTTGGGACGGAGGGAGCACAAATTAAAGTGACTGACACGATCATTCTAGTGCTGCTCCGAAGGCGAAGGCTAACAGCTTGCAAGTCCCATCACAGGTGTTTGACGTCCGAGGCGCCGGCGAAGAAGTCATGTCGAAACGCAGGACGCAGTCGTCGCTCACCACGATGCCGACGCCCTCTCC | |||||||||
gi|88270483|gb|CI385741.1|CI385741 CI385741 Oryza sativa (japonica cultivar-group) callus Oryza sativa Japonica Group cDNA clone GGTTGCACTTATTTTGGGACG EST sequence (targeted fragment marked with yellow): GACCAAAACAACACAGCGATTGGCAATTGTGCCTTATACCGAGAATAAGGTAAGGTTTGCAGGAGTGAAACAAAAATCACGGCAAAAAAATATTGGCCGGATCATATGGAAAGACTCGAGATGGTACAGGTACAACACACCAAACCACTAGTAGGTTGGATGTGCGAATAATTGTTCCTCAATATGTGGTTGGGTTAGCCCTACTTGAAATCAGGCTTCTCAGGGTAAGTGCAGCCAGAACGCTGGATGATAACATTTGCGGCATACCAACCAGCCTTCAAAGAGTCTCAATGGTCTTTTGTTGAACCAATTGTGAGAGGAAGCCCTCGAATAAACGCATCACAGCGCCATTGGTGTCAAAAAGCTTCTCCTTTGGTAG | |||||||||
gi|33679681|gb|CF307920.1|CF307920 ABF--01-I12.b1 ABF3-overexpressing transgenic rice plasmid cDNA library (ABF) Oryza sativa Ja GGTTGCACTTATTTTGGGACG EST sequence (targeted fragment marked with yellow): TTTTTTTTTTTTTTTTTTTTTTTTTGGCAATTGGGCCTTATACCGAGAATAAAGTAAGGGTTGCAGCAGTGAAACAAAAATCACGGGAAAAAAATTTTGGCCGGATCATATGGAAAGCCTCGAGATGGTACAGGTAGAACACACCAAACCACTAGTAGGGTGGATGTGCGAATAATTGGTCCTCAATATGTGGGTGGGTTAACCCTAATTGAAATCAAGCTTCTCAAGGTAAGTGCAGCCAGAACGCTGGATGATAACATTTGCGGGATAACAACCAGCCTTCACAGAGTCCTCAATGCTCTTTTGTTGAACCAATTGTGAGAAGAAGCCTCCAACAAAGGCATCACCAGCGCCATTGGTGTCAACAAGCTTCTCCTTTGGCAGTAGGATCACAGGGAATGTTTTCACCTGTCCATCCTCAGCGACAACTACTGGATCAGCACCTTGAGTAATCAC | |||||||||
gi|88203267|gb|CI203116.1|CI203116 CI203116 Oryza sativa (japonica cultivar-group) Panicles mixture of one, two, three weeks aft GGTTGCACTTATTTTGGGACG EST sequence (targeted fragment marked with yellow): TCAGTGAAAAGATTTTCCTTTTCCTTCATCGAAACTGATACTAGACTATATCAAAATAATCTACTTACTCCCTCCGTCCTAAAATAAGTGCAGCCATGGTTTTCCACGTCTAACTTTAACAACTCGTCTTATTTGAAAAATTTTTGAAAAAAATTTAAAACATAATTCACGAGTAAAGTAGTATTCATGTTTTATCATCTTATAACTACAAAATTGCTAATTATAAAAAAATTTCGAATAAGACGGATGATCAAAGTTGGGCGCTGAAACTCATGGCTGCACTTATTTTGGGACGGAGGTAATACAAGTTACAAGCCATGATCCGTTCATCTGAATTCTGACATGTATGTACATTCATCTGAAAAAACATGCGGAGTACGTAATGACAGTTTACCACTGGGCGAACAAAGCTACAGCTATGGCAAAAACAAACCATGTAAGTAAGATTAAATACCACATGCCACGACTCGTCATGCCGAGGCCGCCGCCGGCGCTGCGGGCGGGAGCCTCGGAGAGCCGGCGCTGCGCGGTGGCGCGAACCTGGCGGTGACC | |||||||||
gi|33806652|gb|CF329208.1|CF329208 NACL--04-H05.g1 Rice callus plasmid cDNA library (NACL) Oryza sativa Japonica Group cDNA clon GGTTGCACTTATTTTGGGACG EST sequence (targeted fragment marked with yellow): CTCTCCTAGTAACACCACAAACACATAGAACACGAGGAAGATATATTGTCTCTGTCCTGCAAAGAAGCAATCACATACACCCAAACATGCAGATATAGGCAGACAGTGAGGTTTTGGAATGGAAGCCTGCAAGCTGCAAACGTACATATGACCAAATTTTTTTTATGGACGAGTAGTATGCTTTGTGGAACTGACAAGCCACAGCACTACTCCCTCAGTCCCAAAATAAGTGCAGTTTTGCACTGTTCATGTTCAACTTTTGATCATTCGTCTTATTTGAAATTTTTTTATGATTAATATTTTTATTGTTATTGGATGATAAAACATGAATAGTACTTTATAAA | |||||||||
gi|88554153|gb|CI484315.1|CI484315 CI484315 Oryza sativa (japonica cultivar-group) whole body 3mM SA(salicylic acid) for 1day Or GGTTGCACTTATTTTGGGACG EST sequence (targeted fragment marked with yellow): CATATGATAGTCCGTCTTGTCAAGATGAGAGGAGCTACAACANCATTGGTTTTGGTTACAGGGTGGTGGACTGGTGATGACGCAAAATAGAGTACGCATCACAAAGATAAAGATGCTATGATNTCTTTTGTCCGCCCTTGCGCCCTTTCCTTCTCTTCAGGCCCATCCAGATCTCCAATGTTGTCATGATACTCCTCAAGTATATCCTTAACGTCATCCTTAGCCAGTTTGTCCTGTCTTAGAAGCAACTCTATTCTTNGTCTCATCTGTGAATTGCCAGAGTGCCATATATGCCCCACAATAAGTGCAATTACCTGAAGTGTGTAAAGAACAGCTTCTAGCTTGCGATTGTAGCGCTCATCTTCATCCCATCTCTAGATCATCTAAATCAAGACTGT | |||||||||
gi|89164972|gb|CI102060.1|CI102060 CI102060 Oryza sativa (japonica cultivar-group) Panicles one day after flowering Oryza sativa GGTTGCACTTATTTTGGGACG EST sequence (targeted fragment marked with yellow): TTTTTTTTACAAAACAGACCATTTCTTTCCCTAACAATGCATCAAAACACTACACTGCAGCCTCCAAATTTATCCCAAAATCTCAGCTAAAGAAGCTAGTATCTACTACCTCCGTCCCAAAATAAGTGCAGCCATAGATATGCGTACTCAGCGTTTTGACCATCCGTCTGTTTGAAAAATTTATAAAAAATATTTAAAAATTAGTCACACATAAAGTACTATTCATGTTTTATCATCTAATAACAATAAAAATACTAATCATAATCTTTTTTCAAATAAGACGAACGGTCAAATGTTGGACATGAACAGTGTTAAAACTGGACTTATTTTGGGACGGAGAGAGTAGCTAGCTAAACGCCCGGCTAGGCGGCTACTCTACCAGTACTGCTACAACCACCATGTCTAGGCTGATGTGCTGCTTGCTACTGCTGCTACTCCTCCGCGTTCATCTTCGGGGTCTTCATCTCCCAGGCGTCCAGGTTGGTGACCTTGACGTCCGACTCGCCGTTGTT | |||||||||
gi|86878631|gb|CI340551.1|CI340551 CI340551 Oryza sativa (japonica cultivar-group) flower Oryza sativa Japonica Group cDNA clone GGTTGCACTTATTTTGGGACG EST sequence (targeted fragment marked with yellow): GGCCAGCAATACTTTCTTCACGCATTGAGTGCAACAATTATGATACAAAACAGACCATTTCTTTCCCTAACAATGCATCAAAACACTACACTGCAGCCTCCAAATTTATCCCAAAATCTCAGCTAAAGAAGCTAGTATCTACTACCTCCGTCCCAAAATAAGTGCAGCCATAGATATGCGTACTCAGGGTTTTGACCATCCGTCTGTTTGAAAAATTTATAAAAAATATTTAAAAATTAGTCACACATAAAGTACTATTCATGTTTTATCATCTAATAACAATAAAAATACTAATCATAATCTTTTTTCAAATAAGACGAAGGGTCAAATGTTGGACATGAACAGTGTTAAAACTGGACTTATTTTGGGACGGAGAGAGTAGCTAGCTAAACGCCCGGCTAGGGGGCTACTCTACCAGTACTGCTACAACCACCATGTCTAGGCTGATGTGCTGCTTGCTAATGCTGCTAC | |||||||||