| mature miRNA: GTACTATGATGTGTCACATCT species: Oryza sativa database: miRNEST The numbers on the right side of the alignments show a score calculated for them. When calculating the score, a mismatch is given a score of 1, bulge: 2, and wobble: 0.5. |
| Predicted miRNA targets | |||||||||
gi|55411522|gb|CV723898.1|CV723898 root--05-C04.g1 Rice root lambda phage cDNA library (root) Oryza sativa Japonica Group cDNA c GTACTATGATGTGTCACATCT EST sequence (targeted fragment marked with yellow): GCACGAGGTGGTGATCAGCCCTCTGCCGGACTTTGTGAAAGATGGTAAAGTGAAATACAAAACAATAAGCTACCAGGATTTGCTGACAGAGTACTTCACAGCAGAGCTTGATGGAAGGAACCGGCTAAAGAAAATGAAGCTGGATCCGTAGCCATCGACCATGATGCATGTAACAATTTTATAAGAAGAACCTGCTTTCAGGTTGTGTCCTACTTACTGTATCTGCTATCTACTCTCTTCATCCTAAAATAAATAAACATAGTACATATATGATACATCATAGTACCATAAATTAGAAAATGTTACATCGTGTACTATGTTTTTTTAAAAAATTTGGG | |||||||||
gi|88727521|gb|CI751176.1|CI751176 CI751176 Oryza sativa (japonica cultivar-group) library (Kikuchi S) Oryza sativa Japonica Gro GTACTATGATGTGTCACATCT EST sequence (targeted fragment marked with yellow): ATGCATCTATGTTTAGTTACTCTCTGATTCTATGTTGCAGCTATCAAAGGGTAGGAAGCTTGGCAAACAGGATATTGCAAAACTGAAAGAGCAGTACAATCCGTCCATTCTTCGTAAGGAAGGATACTTCCGGCACTATGAGGAGAGTCTTGAGTGGTACTTCGATCTTGAATGGTGCAAGTACTCTGGTTTTCAAGACTATCAGCGGCTAGTGCTTCATGATAATGTAGGTATCAACACTTGACTCCTCCATGCCAGCTAGTTTACTCCCTCCGTCCCGAAAAAAACGAATCTAGGACGGGATGTGACACATTATAGTACAATGAATCTGGACAAAGGTATGTCCAGATTCGTAATACTAGGATGTGTTACATCTAGTATTAGGTTGATTTCTA | |||||||||
gi|88447943|gb|CI538946.1|CI538946 CI538946 Oryza sativa (japonica cultivar-group) library (Kikuchi S) Oryza sativa Japonica Gro GTACTATGATG-TGTCACATCT EST sequence (targeted fragment marked with yellow): CTACAAATACTTATATTTGATAACAGAGAGAGTAGTACATATATTTTCCTACTGTGAGCATTTTCCAAATTTAATATATTTTGACGAATGATTCAAATCTACCTCCCTCCGTCCCAGATGTGATANCATCCTAGTACTACGAAATCCGGAATATACATTGTCTAGAATTAATAGTGGCTATNAATATGTTTACATTCATGTTCCTACAATTGGGTTTTNACTAGGGACGGAGTATACTATATCCGACCGCTCGAAGAATTAGAGAAATTCCTGCTTCATCTTGTGATGTACCCAACGAAGTCATCCAAGCCTTTCCGNGAGGAACCCGCGTCTGCCACAGACGCGCGGACGGNCTGCCGAGCTCATTTGCCCGCCGCCGAA | |||||||||
gi|41884351|gb|BX929182.1|BX929182 BX929182 Oryza sativa library (Han B) Oryza sativa cDNA clone y862h01p3, mRNA sequence GTACTATGATGTGTCACATCT EST sequence (targeted fragment marked with yellow): TGGCCTTTTTTTTTTTTTTTTTTTTATAAATATAATTTTAGTTCAATTAGCACGAATCTCAGTTCTGATAAACCAAAACACTACTAGTACAAATAGATAGATAATTCAATAGGGCAAATCCTCATCATCGACCAAATGAATTAGCAGACTCGTATCATCTCAGAAATGGTACATCATAGTACAGCAGAAACTGCACTAATTTATGCTCTAAAAATCGGGTGATCCAAAGCCTCCGGGCTCTCTTAAGCTGAAGGATACACGAACACATGACATCAACAAAATTGTCCGTTACAGCGTCAGAAAAATTTTCAGACAAAAAGTTCAGCGTCTCTCACCTGGCTACACCTACACATACTTGCCTCTGTACTTAGGCTTGGAGTACCTGTCTATGGACGGCTTCCCGTCGGCGGAGGAGGCGGCCTGATCGGCGGGGCTGAACACGGCGGAATGGAGGTATCCCTCCTCCATCAACCAATAGTGGAAGAAACCTGAACACGC | |||||||||
gi|86498919|gb|CI141552.1|CI141552 CI141552 Oryza sativa (japonica cultivar-group) mixed shoot (Normalized Library) Oryza sativa GTACTATGATGTGTCACATCT EST sequence (targeted fragment marked with yellow): TTTGCGTACTCTATCCGTCCCATAAAAAACTAGATGTGATACATCCTAGTACTACAAATCAGTACATACATATATCTAGATTTATCGTACTAGAATATATCATATCTGGTCCTAGATTCGGTTTTTTATGGGACGGTGGGAGTATCGATGGATTAATTCCATGGCGGTCGGTCTGGACGAGATCATCCTCCTTTCTGCTTGAAGGAGGAGTACATCTGGACAATGGTGGAGACGAAGGTGACGAAGGCGACGAACTCGGCGACCACCGCCCATGGCACCGTGAAGTAGTTGCGCTTCACGTCCGCCCACATCATGAACAGCGGGTGCCGGCTCCTCTCCCGGAGCTCCACCACCATCCCTCCCAGGTAGCTCCGCTCCAGCTCCACCTCGCCGCTCGCCGCCCCGACCTGCCGGAACAGCCTCACCACCTCCTCCTTGCCCTCGCCGCCGCCGTTCCCGTGCACCACCGCCACCACCTCCGCCGCCGCCAGCGCCCCGGCGTCCTCCGCCGACTGCACCATCTTCGCCATGAACGACACGTACGCCGACACGTCGCGCGCCTCCGCCTTCGCCGCCGACTGCTCGAACGCCATCAGGTTCAGCA | |||||||||
gi|86518084|gb|CI158290.1|CI158290 CI158290 Oryza sativa (japonica cultivar-group) Panicles mixture of one, two, three weeks aft GTACTATGATGTGTCACATCT EST sequence (targeted fragment marked with yellow): TTTTTTTTTTTTTTTACAGCAATGTTAGAGCCATATGATTCTGTATAAACTAGTAGCAACTTTTATGCAAGGAACCTTTTGCCCCCAACCTGCTCGATCCTGCTCCCCTCACCTCATCAATGCTAAGGCAGCTCTGATCACACGGACTTGTAAATCACAGTGTCCACAACAACAATGCCATCTTGGAACAACAAAACTGTATATCTCCGAACAAATGCTACGAGATTTTTCGACGGTCGAGGTGTCAAACGTTTGATCTTCTCAGAGGCATCGGTGATTCACCCGTCCTTGAGCTGAACACCGATCTTGGGTATTGTGAATCGCCCATGAACTCCTGCAAATTTAGTTGCTTTGTTAAGTTGAAAGATTTGTTCGATTTGTTTGAGTAGCTGTGTGTTCAGTCGAATGTTTTTTTTAAAGGTTGTGTTAAATTGAAGGGTAGTTTTATCATTCTTAAGAAGGTACCTATAGGTACCATATTTTCAAGTGTAAAATTTGATACCTCTAGATACTAAGTACTCTCCCCATCCCATAAAAATATAATCTAGTATTAGATGTGACACATCATAGTACTATGAATTTAAACATACCTCTATCCAGATTTATTGTAATAGAATATGTCACATCATATCCAGATTCGTTTTTTTCTTTTGGACGGAGGGAGTATCT | |||||||||
gi|86253383|gb|CI058308.1|CI058308 CI058308 Oryza sativa (japonica cultivar-group) UVC irradiated shoot Oryza sativa Japonica Gr GTACTATGATGTGTCACATCT EST sequence (targeted fragment marked with yellow): GACCAANATGATTAGCAGCCTCGTATCATCTCAGAAATGGTACATCATAGTACAGCAGCACCTGCACTAATTTATGCTCTAAAAATCGGCTGATCCAAAGCCTCCGGGCTCTCTTAAGCTGAAGGATACACGACCACATGACATCGACAAAATTGTTCGTTACAGCGTCAGAAAAATTTTCAGACAAAAAGTTCAGCGTCTCTCACCTGCCTACACCTACACATACTTGCCTCTGTACTTAGGCTTGGAGTCCCTGTCTATGGCCGGCTTCCCGTCGGCGGCGGCGGCGGCCTGATCGGCGGGGCTGAACACGGCGGAGTGGAGGTTCCCCTCCTCCATCCACTTATGGTGGTTCTCCCTGAACTCGCGGCGCCGCTCCTCCGCCGCCTTCTCGACCTCCTCGGTGTAGGGCCCGACCTTCACCATGGTCAGCAGGACCCGGCTGTACCTCATGCTCAGGATCTGCTCGCAGGAGGCAAGCAGCCTGAAGCAGGGGTGCTCCGGGTACTTGGCCGGGTTGGCGACGCC | |||||||||
gi|66914124|gb|CX100972.1|CX100972 RECm1901 A normalized whole-life-cycle cDNA library of rice Oryza sativa Indica Group cDNA cl GTACTATGATGTGTCACATCT EST sequence (targeted fragment marked with yellow): CTGGTGCGCGGACGGTCGNGATCCGGGTCGACCACGCGTCGGCACACGGCTGCACAATGGCACTCTCCTATGCTCTTCTTGTCTCCCTCCTACTAGTACTAGTCGCCGCCGCCACTGGCGACGAGGCATCGCCGTCGAACGCGGCGGCGCCGGCGGCGCCCGTGCTGGTCGGCGGGAGGACGGAGATCAGGCACGTGGGCAGCAACAAGGCGGTGCAGTCGCTGGGCCGCTTCGCCGTCGCCGAGCACAACCGCCGCCTCCGCCACGGCGGCTCCGGCGGCCCCGCCGACCCCGTCCCGGTGAAGCTCGCGTTCGCACGCGTCGTGGAGGCGCAGAAGCAGGTCGTCTCCGGCGTGGCCTACTACCTCAAGGTCGCCGCGAGCGCGAGGGACCCCCGCGGCGGCGCCGCCGCCGGCGGTGACCGGGTGTTCGACGCCGTGGTGGTGGTGAAGGCCTGGCTCAAATCCAAGGAGCTCGTCTCCTTCACGCCTGCTTCTTCTACCAAATAATCATGCTCAAATATATGTATTAGTTTCACTCTAATTATATTAATTATTACTAGTTGGACTTTACTCCCTCCGTCTAATAAAAAATCAACCCTAGTACGGATGTAATACATTATAGTACTACGAATCAGACATCCGGTACCATAGTATTTTATGGCAACGGAGATATTAGTTTTTTAAAAAAACAAACAACACACAACAAAAGAGATAACAAGATAACGAAGACAAAAAAGATGGGGGCGCTAAAGAATCAAGGTTAAGTACGTGATTGAAAGATAAGCCTATAAGGTGTCTAAATCATACGGGGCGCGTTAAACGCTAGTAGGAACCCGGGTACACTATTCGCTAAAAACCCGTAGACAGGGATAAGAGAAAGGCGGATAAC | |||||||||
gi|88551085|gb|CI481111.1|CI481111 CI481111 Oryza sativa (japonica cultivar-group) whole body 1mM ACC(1-aminocyclopropane-1-carb GTACTATGATGTGTCACATCT EST sequence (targeted fragment marked with yellow): GTTTGAAACATACATTAATTCTCCTTTATATTGCCACCAAAAATTTTACAAAACCTATCCCTAATAATAACCAAGCCATCACACTAAGTAGATCAACTGTTAGGGCTCAAGATTAACCAGAAGATGATGATGATTTTGCCAGTAATTACCACTCCNCTCCGTCCATAAAAAACCAACACTCGATGCGACACATCCTAGTACTACGAATCTAGACATATTTCTATCCAGATTCGTTGTACTATAATGTGTCACATACAGAGCTAGATTCACTTTTTGGACGGAGGGAGTAGACCATATCCATGGCGTCGTCGCGTACAGCGTGTACTTCTCCCAAGAGCGAGAGGAGGAAGAAGAAGGAGAGATGGTCAGCTAGGACACCGAATGCCTCGTGTTCCGCGACGGCGT | |||||||||
gi|88430683|gb|CI596797.1|CI596797 CI596797 Oryza sativa (japonica cultivar-group) flower Oryza sativa Japonica Group cDNA clone GTACTATGATGTGTCACATCT EST sequence (targeted fragment marked with yellow): GTAACCAAACCAAATTCGTAAATTAATATTTCTAGTACTGTATCTATTTTTCTTCTTAAGATTATGAATTGCTCTTTTTTATCCTAAAATATATAACAATCCAGTACGAGATGAGATACATCATAATAATATGAATTCAAACAGATTTTCTGTTTAGATTCGTGATGTTAGGATATGTCTCATCTCAGTACTAAGTTGCTATATTTTACTCTCTCTATTTTAAAACAAAGTAAAATAGTACGAGATGCGATACATTATAATACTATAAATTGAAACAGACATTATGTTCAGATTTGAAGTATTATGATATATCACATCTACTACTAGAATTCTATATTTTAAGAGATAAATTTTACCATTTTTGAGAGGTATGAAAATGTACCAAAATTTATTGCAAATTTCCGTAAC | |||||||||
gi|58674475|gb|CK063162.1|CK063162 68784rsicem_12177.y1 Oryza sativa cv. PA64s panicle ferile cDNA library Oryza sativa Indica G GTACTATGATGTGTCACATCT EST sequence (targeted fragment marked with yellow): CAGGAATTCGGCACGAGGGTGGTACAGGTGCCTTGAAATAAGAAGTTGGATAGGTCTGAAAGTTGCTCTGATGGTGGTGGTGTCACACATTCATCCNAGTAGTTTGGATCATCCATCTGATCAAAGCTTTACAGATACATGCCTACAGAATGAAAGCGCAAACCTGTCTCCACAATTTATTGGTGCTAGCAAGAAATCTCCCATAGAGCAAAGTGAAGAAGAAAGGGAAGAGATACACAATATAACAACGGAGGGGATTCAACAGAATGTTCACACAAGAGGGGTGAAACATCATAGTACTCCAAGTTGTTCCCAAGAAGTGAACTCTGGCTCATTACATGTTAGCTCCAGTCAGTTGCAAGGGATGGGTGCTCTTCAGCAGGATCCTCAGTCAGAAA | |||||||||
gi|88967014|gb|CI379898.1|CI379898 CI379898 Oryza sativa (japonica cultivar-group) callus Oryza sativa Japonica Group cDNA clone GTACTATGATGTGTCACATCT EST sequence (targeted fragment marked with yellow): CAGACATCACCAAGTAAATGGATGAATATATGCTGTAGATCCAAAAAAATTGCAGTACAACAGTAACGTTTTCACATATGTTGGGTCTCACAAATATCTATTATGTTGGATAGGGAATGAACAAATTCATCAAAACCTTCAAAAAAATTATTGATGTCAGCGTCACTAGTTAACTTGACAAATCCAGTGGAATAAATGACAAGAAACAAGTATGTTCAAGAGTCAAAACAAAAACATGAACAACTCCCAAAATAAACAAACACAGGATGTGACGCATCCTAGTAATACTAATTTGAACTGACGTCACATCTTATACTAGATTTGTTTTTTTGGGACAGAGGGAGTACATTATAACAAACAATTCAGTTAAAAGAGAAGCAAAGTAAGGCATTACGTCAAAAATATGACAACAGATAATTGCCACACGATACATACAAGGATTTA | |||||||||
gi|44673015|gb|CR286449.1|CR286449 CR286449 Oryza sativa library (Han B) Oryza sativa cDNA clone y819d02p3, mRNA sequence GTACTATGATGTGTCACATCT EST sequence (targeted fragment marked with yellow): NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTTTTTTTTTGGGTTAATGTGAGAATTCTAGGCTGTGAGAGCAAACGTGGAGACTCCTTTTTTATTACTTTATTAATATAATAGATAGATATATGGCATTCTAAATATAAGTGCATACTCTCTTTGTCTTAAAATATTTTGGTAGGATCGGATACATCATAGTACTACAAGTCTGAATAGGCAATCTGTCTATATTTATAGTATTGGTATATGTCCCATCCAACTAAAACTTCTTATATTTTGGAACGAAGGAAGTAATGTTTTTCATCGTCTTAAGTCACTTAAGTATAGTTTACTTTAACTTACACAAGCCTTTGCCAAATTTTACATTTATCATAGTTTATTATTAGCATTGGCTTTAAACCAGGGATAACATAGCAGTTGTTCAGATTTATGCCATTTCAAACCATAGCTTTACTTTGGGTAATGTTACGCAAGATGTGCATACATATAGATATATATATCAAACATTGATCACGTAGTATGAAAATCATAGCAAAATAGGGTGATTATAACCACTATGCAAATTTGTGGAGATAAGATATATCGGACCACAGGAGAAAACCTTTGTGATATAAGATAACCAAAAATATGCCCTTACGGCCCCCACAAGGCAAGACCATAAAAATTAAACACGCAAGTTGAACCAA | |||||||||
gi|88997339|gb|CI390005.1|CI390005 CI390005 Oryza sativa (japonica cultivar-group) callus Oryza sativa Japonica Group cDNA clone GTACTATGATGTGTCACATCT EST sequence (targeted fragment marked with yellow): AGGGCAAATCCTCATCATCGACCAAATGAATTAGCAGCCTCGTATCATCTCAGAAATGGTACATCATAGTACAGCCAGCCACTGCACTAATTTATGCTCTAAAAATCGGCTGATCAAAGCCTCGGGCTCTCTTAAGCTGAAGGATACACGACCACATGACATCGACAAAATTGTTCGTTACAGCGTCAGAAAAATTTTCAGACAAAAAGTTCAGCGTCTCTAACCTGCCTACACCTACACATACTTGCCCTCTGTACTTAGGCTTGGAGTCCCTGTCTATGGCCGGCTTACCGTCGGCGGCGGCGGCGGCCTGATCGGCGGGGCTGAACACGGCGGAGTGGAGGTTCCCTCCTCAATCCACTTATGGTGGTTCTCCCTGAACTCGCGGCGCCGCTCCTACGCCGCCTTATAGACCTACTCGGTGTAGGGCCCGACCTTAACAATGGTAAGC | |||||||||
gi|88275118|gb|CI395722.1|CI395722 CI395722 Oryza sativa (japonica cultivar-group) seed Oryza sativa Japonica Group cDNA clone J GTACTATGATGT-GTCACATCT EST sequence (targeted fragment marked with yellow): GAATTCTACAAATACTTATATTTGATAAAAGAGAGAGTAGTACATATATTTTCCTACTGTGAGCATTTTTCAAATTTAATATATTTTGACGAATGATTCACATCTACTCCCTCCGCTCCAGATGTGACTACATCCTAGTACTACGAATCCGGATATACATGTCTAGATTTATAGTGCTATAATATGTTACATCATGTTCTAGATTTGTTTTTAATAGGACGGAGTATACTATATCCGACCGCTCGAAGAATTAGAGACATTCGTGCTTCATCTTGTGATGTAGCCAACGAAGTCATCCAA | |||||||||
gi|88528012|gb|CI456212.1|CI456212 CI456212 Oryza sativa (japonica cultivar-group) whole body 1mM ACC(1-aminocyclopropane-1-carb GTACTATGATGTGTCACATCT EST sequence (targeted fragment marked with yellow): GTTTGAAACATACATTAATTCTCCTTTATATTGCCACCAAAAATTTTACAAAACCTATCCCTAATAATAACCAAGCCATCACACTAAGTAGATCAACTGTTAGGGCTCAAGATTAACCAGAAGATGATGATGATTTTGCCCAGTAATTACCACTCCCTCCGTCCCATAAAAAACCAACACTCGATGCGACACATCCTAGTACTACGAATNTACACATATTTCTATCCAGATTCGTTGTACTATAATGTGTCACATACAGAGNTAGATTNACTTTTGGGACGGAGGGAGTAGACCATATCCATGGCCGTCGTCCCGTACAGCGTGTACTTCTCCCAAGACCGAGAGGAGGAACAACAAGGACCAGATGGTCAGCTACGACAACCAATGCCTCCTGTTCCGCGACCGAGTTCACT | |||||||||
gi|112786195|gb|EE592251.1|EE592251 FU_REN01B2-F10.seq Rice mixture of leaf, root, panicle Oryza sativa Japonica Group cDNA, mRN GTACTATGATGTGTCACATCT EST sequence (targeted fragment marked with yellow): GTCGCCGCGAGCGCGAGGGACCCCCGCGGCGGCGCCGCCGCCGGCGGTGACCGGGTGTTCGACGCCGTGGTGGTGGTGAAGGCCTGGCTCAAATCCAAGGAGCTCGTCTCCTTCACGCCTGCTTCTTCTACCAAATAATCATGCTCAAATATATGTATTAGTTTCACTCTAATTATATTAATTATTACTAGTTGGACTTTACTCCCTCCGTCTAATAAAAAATCAACCCTAGTACGGATGTAATACATTATAGTACTACGAATCAGAAAACCGGTACCATAGTTTTTTATGGAACGGAGATATTAGTTTTTTATGGGACGGATGGAATAATTACGAAGCATGTGCGTGCACAGGCTTATACTCCTCCTTTTGGAGTATATGGCATATGCATGTATGGTTTTGTTTGGTTCCTTTGGAGTTTTACATATCGATAATCACTTATAAATAAAAAAAAAAAAAAAAAAAA | |||||||||
gi|86873645|gb|CI316307.1|CI316307 CI316307 Oryza sativa (japonica cultivar-group) shoot Oryza sativa Japonica Group cDNA clone GTACTATGATGTGTCACATCT EST sequence (targeted fragment marked with yellow): AGATCAACTGTTAGGGGTCAAGATTAACCAGAAGATGATGATGATTTTGCCAGTAATTACCACTCCCTCCGTCCCATAAAAAACCACCACTCGATGCGACACATCCTAGTACTACGAATGTAGACATATTTCTATCCAGATTCGTTGTACTATAATGTGTCACATACAGAGCTAGATTCACTTTTTGGACGGAGGGAGTAGACATATCCATGGGGTCGTCGCGTATAGCGTGTACTTTTCCCAAGAGCGAGA | |||||||||
gi|89164385|gb|CI101473.1|CI101473 CI101473 Oryza sativa (japonica cultivar-group) Panicles one day after flowering Oryza sativa GTACTATGATGTGTCACATCT EST sequence (targeted fragment marked with yellow): TTTTTTTTTTTTTTTTTTTTTTCAATAGGGCAAATCCTCATCATCGACCAAATGAATTAGCAGCCTCGTATCATCTCAGAAATGGTACATCATAGTACAGCAGCACCTGCACTAATTTATGCTCTAAAAATCGGCTGATCCAAAGCCTCCGGGCTCTCTTAAGCTGAAGGATACACGACCACATGACATCGACAAAATTGTTCGTTACAGCGTCAGAAAAATTTTCAGACAAAAAGTTCAGCGTCTCTCACCTGCCTACACCTACACATACTTGCCTCTGTACTTAGGCTTGGAGTCCCTGTCTATGGCCGGCTTCCCGTCGGCGGCGGCGGCNGCCTGATCGGCGGGGCTGAACACGGCGGAGTGGAGGTTCCCCTCCTCCATCCACTTATGGTGGTTCTCCCTGAACTCGCGGCGCCGCTCCTCCGCCGCCTTCTCGACCTCCTCGGTGTAGGGCCCGACCTTCACCATGGTCAGCAGGACCCGGCTGTACCTCATGC | |||||||||
gi|109712534|gb|CI105142.1|CI105142 CI105142 Oryza sativa (japonica cultivar-group) Panicles one day after flowering Oryza sativ GTACTATGATGTGTCACATCT EST sequence (targeted fragment marked with yellow): TCTTTTCGCTGTTGAATAATTGATTGTATAGGAAACACATATACAATGATATAAATAACAGCTGTACAATGGAAATGCAAGTGTGTGTGTACACAACTTGGCGGATGAAACCTACTTCAATTCTTCCCCATTTTGAAACATACATTAATTCTCCTTTATATTGCCACCAAAAATTTTACAAAACCTATCCCTAATAATAACCAAGCCATCACACTAAGTAGATCAACTGTTAGGGCTCAAGATTAACCAGAAGATGATGATGATTTTGCCAGTAATTACCACTCCCTCCGTCCCATAAAAAACCAACACTCGATGCGACACATCCTAGTACTACGAATCTAGACATATTTCTATCCAGATTCGTTGTACTATAATGTGTCACATACAGAGCTAGATTCACTTTTTGGACGGAGGGAGTAGACCATATCCATGGCGTCGTCGCGTACAGCGTGTACTTCTCCCAAGAGCGAGAGGAGGAAGAAGAAGGAGAGATGGTCAGC | |||||||||
gi|88235504|gb|CI236061.1|CI236061 CI236061 Oryza sativa (japonica cultivar-group) Panicles mixture of one, two, three weeks aft GTACTATGATGTGTCACATCT EST sequence (targeted fragment marked with yellow): TTTTAGCAGCCTCGTATCATCTCAGAAATGGTACATCATAGTACAGCAGCACCTGCACTAATTTATGCTCTAAAAATCGGCTGATCCAAAGCCTCCGGGCTCTCTTAAGCTGAAGGATACACGACCACATGACATCGACAAAATTGTTCGTTACAGCGTCAGAAAAATTTTCAGACAAAAAGTTCAGCGTCTCTCACCTGCCTACACCTACACATACTTGCCTCTGTACTTAGGCTTGGAGTCCCTGTCTATGGCCGGCTTCCCGTCGGCGGCGGCGGCGGCCTGATCGGCGGGGCTGAACACGGCGGAGTGGAGGTTCCCCTCCTCCATCCACTTATGGTGGTTCTCCCTGAACTCGCGGCGCCGCTCCTCCGCCGCCTTCTCGACCTCCTCGGTGTAGGGCCCGACCTTCACCATGGTCAGCAGGACCCGGCTGTACCTCATGCTCAGGATCTGCTCGCAGGAGGCAAGCAGCCTGAAGC | |||||||||
gi|88531879|gb|CI458397.1|CI458397 CI458397 Oryza sativa (japonica cultivar-group) whole body 1mM ACC(1-aminocyclopropane-1-carb GTACTATGATGTGTCACATCT EST sequence (targeted fragment marked with yellow): GTTTGAAACATACATTAATTCTCCTTTATATTGCCACCAAAAATTTTACAAAACCTATCCCTAATAATAACCAAGCCATCACACTAAGTAGATCAACTGTTAGGGCTCAAGATTAACCAGAAGATGATGATGATTTTGCCAGTAATTACCACTCCCTCCGTCCCATAAAAANACAACACTCGATGCGACACATCCTAGTACTACGAATCTAGACATATNTCTATCCAGATTCGTTGTACTATAATGTGTCACATACAGAGCTAGATTCACTTTTTGGACGGAGGGAGTAGACCATATCCATGGCGTCGTCGCGTACAGCGTGTACTTCTCCCAAGAGCGAGAGGAGGAAGAAAAAGGAGAGATGGTCAGCTAGGACACCGAATGCCTCGTGTTCCGCGACGGCGTCGACCTCGTCTCCTCGCCGGGGCTCTCGA | |||||||||
gi|89183890|gb|CI046455.1|CI046455 CI046455 Oryza sativa (japonica cultivar-group) callus Oryza sativa Japonica Group cDNA clone GTACTATGATGTGTCACATCT EST sequence (targeted fragment marked with yellow): TTATATTTGATAACAGAGAGAGTAGTACATATATTTTCCTACTGGTGAGCATTTTTCAAATTTAATATATTTTGACGAATGATTCAAATCTACTCCCTCCGTCCAGATGTGATACATCCTAGTACTACGAATCCGGATATACATGTCTAGATTTATAGTGCTATAATATGTTACATCATGTTCTAGATTTGTTTTTAATAGGACGGAGTATAGTATATCCGACCGCTCGAAGAATTAGAGACATTCCTGCTTCATCTTGTGATGTAGCCAACGAAGTCATCCAAGCCTTTCCGCGAGGACCCGCCGTCTGCCACAGACGCGCGGACGGCCTCGCCGAGCTCCTTTGCCCGCCGCCGTATTGTCATCCCTTTCTCAGGCAGCATCGCCTCCTCAATGACCTCCTGGATGGCCTCCGCCGGGACCACCTCGCTGTGCTTCTCCCATGGCCTCACGAGGAGGC | |||||||||
gi|117251224|gb|CT844074.1|CT844074 CT844074 Oryza sativa (indica cultivar-group) cv. Guang Lu Ai 4 Oryza sativa Indica Group cD GTACTATGATGTGTCACATCT EST sequence (targeted fragment marked with yellow): GTGAAGCAGCACAGCACACGGCTGCAACAATGGCCACCTCTCCTATGCTCTTCCTTGTCTCCCTCCTACTAGTACTAGTCGCCGCCGCCACTGGCGACGAGGCATCGCCGTCGAACGCGGCGGCGCCGGCGGCGCCCGTGCTGGTCGGCGGGAGGACGGAGATCAGGGACGTGGGCAGCAACAAGGCGGTGCAGTCGCTGGGCCGCTTCGCCGTCGCCGAGCACAACCGCCGCCTCCGCCACGGCGGCTCCGGCGGCCCCGCCGACCCCGTCCCGGTGAAGCTCGCGTTCGCACGCGTCGTGGAGGCGCAGAAGCAGGTCGTCTCCGGCGTGGCCTACTACCTCAAGGTCGCCGCGAGCGCGAGGGACCCCCGCGGCGGCGCCGCCGCCGGCGGTGACCGGGTGTTCGACGCCGTGGTGGTGGTGAAGGCCTGGCTCAAATCCAAGGAGCTCGTCTCCTTCACGCCTGCTTCTTCTACCAAATAATCATGCTCAAATATATGTATTAGTTTCACTCTAATTATATTAATTATTACTAGTTGGACTTTACTCCCTCCGTCTAATAAAAAATCAACCCTAGTACGGATGTAATACATTATAGTACTACGAATCAGACATCCGGTACCATAGTTTTTTATGGAACGGAGATATTAGTTTTTTATGGGACGGATGGAATAATTACGAAGCATGTGCGTGCACAGGCTTATACTCCTCCTTTTGGAGTATATGGCATATGCATGTATGGTTTTGTTTGGTTCCTTTGGAGTTTTACATATCGATAATCACATATAAATAAACTCGTGTTAAAAAACATATAAATAAACTCAAAAAAAAAACTAAAAAAAAGAAAAAAAAAAGGCCAGCTTGGCCTCGAGGGGGGGCCCGGTAC | |||||||||
gi|88984912|gb|CI011811.1|CI011811 CI011811 Oryza sativa (japonica cultivar-group) etiolated shoot Oryza sativa Japonica Group c GTACTATGATGTGTCACATCT EST sequence (targeted fragment marked with yellow): TTTTTCCCAAAAATTAAGAAAAATTACATTATACTCCCTCCATTTCATAATATAAAACATTTTAGTTAAATATGACACATCATAATACAAAAAATCTAGACGGACGATGTCTATATGTCAAGTTCACCTAAAATGTCTTATATTATTAGACAGACGAGTACTAGTACACTAGTACTTCATTCTACTGATTTACTGACGGCTTGTGCAACTCTGACGTCATCAGTCTGACGAGGTGGGCCACAGGGAGAACGGCAGCGAGACGTCCCTGAAGACGACGGCGAGGCCGACGGCGGCGCTGCCGGCGAACGAGAGGAGCTTCGACTGGTGCACCTGGCCGCAGAAGCGGCCGGCGCCGGCGCCGCAGGCGTTGATCTGCGGGCCGTACGCCGACACGGCGGCGAACGCGCCGCCGGTGGCCGTGTAGACGAGCGCCTGCACGGCGACGTCGATCACCACGAGGAGGATCCCGGGGAGCTTGCCCTTGAACCCCTCGTCGTCGTCG | |||||||||
gi|88542585|gb|CI471924.1|CI471924 CI471924 Oryza sativa (japonica cultivar-group) whole body 1mM ACC(1-aminocyclopropane-1-carb GTACTATGATGTGTCACATCT EST sequence (targeted fragment marked with yellow): GTTTGAAACATACATTAATTCTCCTTTATATTGCCACCAAAAATTTTACAAAACCTATCCCTAATAATAACCAAGCCATCACACTAAGTAGATCAACTGTTAGGGCTCAAGATTAACCAGAAGATGATGATGATTTTGCCAGTAATTACCANTCCCTCCGTCCCATAAAAAACCAACACTCGATGCGACACATCCTAGTACTACGAATCTAGACATATTTCTATCCAGATTCGTTGTACTATAATGTGTCCCATACAGAGCTACATTCACTTTTTGGACGGAGGGAGTAGAACATATCCATGGCGTCGTGCCGTAAGCGTGTACTTCTCCCAACAGCGACAGGAGGAAGAACAAGGA | |||||||||
gi|29615816|gb|CB620828.1|CB620828 OSIIEa06E16.f OSIIEa Oryza sativa Indica Group cDNA clone OSIIEa06E16 5', mRNA sequence GTACTATGATGTGTCACATCT EST sequence (targeted fragment marked with yellow): CTTTTTTTGGCGGATGAAACCTACTTCAATTCTTCCCCATTTTGAAACATACATTAATTCTCCTTTATATTGCCACCAAAAATTTTACAAAACCTATCCCTAATAATAACCAAGCCATCACACTAAGTAGATCAACTGTTAGGGCTCAAGATTAACCAGAAGATGATGATGATTTTGGCAGTAATTATCACTCCCTCCATCCCATAAAAAACTAACACTCGATGCGACACATCCTAGTACTACGAATCTGGATATATTTCTGTTCAGATTCGTTGTACTATAATGTGTCACATCCAGAGCTGGATTCACTTTTTTTTTTTTTTTTTGGATGGAGGGAGTAAACCATATCCATGGCGTCGTCGCGTACAGCGTGTACTTCTCCCAAGAGCGAAAGGAGGAAAAAAAAGGAGAGATGGTCAGCTAGGACACCGAATGCCTCGTGTTCCGCGACGGCGTCGACCTCGTCTCCTCGCCGGGGCTCTCCGACGTGTCGGAACTGCTGTTCTCCCCGCTGCTTGCCTTGCCAAAACACAGCTTGCTCAGTATCTTCTTCGGGATTAGCCCGCCGCCGCCGCTCCCCTTTGCTGACGCCGACGACGGGGGCGGCTTCTTGCAGGCGGCCTGA | |||||||||
gi|66930277|gb|CX117125.1|CX117125 EI107P06 A normalized whole-life-cycle cDNA library of rice Oryza sativa Indica Group cDNA cl GTACTATGATGTGTCACATCT EST sequence (targeted fragment marked with yellow): ACACGTGTCGAACATAGTCCACGTTGGTTATTTAGTCAGAGTCCACACGGACCTCCAGCCGTCGGTTTCTCAATCACCAGCATAACAATCACGACTACTACGTCCACTCTAGTCAAACTCCTCCTCCGCCAGCATCCATTACTGAACGTGAACATCATGGGTTCACATACAATTAGGTTCTAGGAGACAGACATAAACAGTAAAGAATAAGTGGCAGTGAAGGAAGTATAAACTATAATAAGCGTAAGAAACAGAACGAAGTATGAAATAAAAATGATAAATAAGAGATTAAGATTATTAATGTGCATAAGCGGATAGGAGATAGATCACTGAGATTGATGCATAGATCATAGTAAAGGCTATATCACTCACGGTGACCTGCATACATCTAGTGGAATGATGTGTGGAGAGCAGAGTATTTTTGAACGCGAGACACAGACTGCTGACGAGTGTGCCGATCAGCTCAGCAGTCTGCATCGTAGATCCGACATGCAGATAGCCTAGATCCAAGCGGTACTGATACGGACATGATATCATATATAGAGTAGAGTACTGAGTGACATAAGAGAGTACCAAGAGACTAAGATACTCAGCAAGAAATCTCGGAAACAGATATCATAATTATGGAAAGTATTAGAGTATATAGAGAATATTGGTATAAATTGACTAGTAGATGGTATAATATGTACTCGATACTATGCACATCAAAGATAGTAGTCAGACATTTATAGATATGAGATCTAGCAGTTGGCTTCTTGATGACTATGATAGATCAGTGATCGTACGAAGGTGTCGACTCGTGAGATACATAACGACTAGACAGATAATAACAGAGCTGCTATGTTGATGATCTTATTCGGAGTATATAGTAGATATGATATAGTTATACGAGTGAGATATAGCTGAATGAGTATGATAGTAAGGAATGTAGTCAAACTGTTATCTTGTTGTGCTTGAGTGGAGAGTTAATAATAGATGTTGTAACGATTTTGATGATTCGGATGCATGTTATCTGTGATGCATCGTAGTACTACATCTAGTCGATGCGAATCGAGTGCATTAATGGATGGATAAGCAGGTGGTCATAGTGTAGTGGATTGTATGCTAGGTTGTAGTCGATGCCGTGAGAGTATGGTTATCTGATACTGTGTATGAGTTAGAGTCGGATGTGGAGGGTGTGGTATTAATAGGATAGATCTCTCCTCTGTGTCAGATATAGCTGTGTGTGGATCTTACCTGTTAGGTCTTGTCTGACTATGCGCACTACTCAGTTAGCATTAGTCTAGACCTTAGTCGGTATAACTTGTATCATAGTCTAGTGTCTAGGTAGTGTCACTTGTCGTCTCGA | |||||||||
gi|88693513|gb|CI737088.1|CI737088 CI737088 Oryza sativa (japonica cultivar-group) 1 nuclei stage pistil Oryza sativa Japonica G GTACTATGATGTGTCACATCT EST sequence (targeted fragment marked with yellow): TTTTTTTTTTAAATGTACATATGGGTTGAAAATTTTGCACATAATTTATATATCCAATCATACCAGGTACTCTCTCCATCCCATAAAAAACCAACCTAATACCGGATGTGATACATCCTAGTATTACGAATCTGGACATCCCTCCGTCCCTAAAAAGCTAACCTAGTAGACACATCCGNGTAACTAAGGGTTNGGGTTTTTTATGGGGGAAATTGGGGAGGAAGTAAGGAATAAGCACATTATTTTATTATTGTGATATTGTCACAGTGTGTTAAGAACAAACTGAGTTAAATTCGGTTAGTTTTCTTGTATGGAGATTGGCTCCAAAGAAAAACAAGAGGTGTGGATTGGATTTGGTTTCGCTGT | |||||||||
gi|86862079|gb|CI330672.1|CI330672 CI330672 Oryza sativa (japonica cultivar-group) shoot Oryza sativa Japonica Group cDNA clone GTACTATGATGTGTCACATCT EST sequence (targeted fragment marked with yellow): CGCTGTTGAATAATTGATTGTATAGGAAACACATATAACAATGATATAAATAACAGCTGTACAATGGAAACTGCAAGTGTGTGTGTACACAACTTGGCGGATGAAACCTACTTCAATTCTTCCCCATTTTGAAACATACATTAATTCTCCTTTATATTGCCACCAAAAATTTTACAAAACCTATCCCTAATAATAACCAACCCATCACACTAAGTAGATCAACTGTTAGGGCTCAAGATTAACCAGAAGATGATGATGATTTTGCCAGTAATTACCACTCCCTCCGTCCCATAAAAAACAACACTCGATGCGACACATCCTAGTACTACGAATCTACACATATTTCTATCCAGATTCGTTGTACTATAATGTGTCAAATACAGAGCTAGATTCACTTTTTGGACGGAGGGAGTAGACCATATCATGGCGTCCTCGCCTACAGCGTGTACTTCTCCCAAG | |||||||||