| mature miRNA: TCTTCCCTACTCCTCCCACTC species: Oryza sativa database: miRNEST The numbers on the right side of the alignments show a score calculated for them. When calculating the score, a mismatch is given a score of 1, bulge: 2, and wobble: 0.5. |
| Predicted miRNA targets | |||||||||
gi|58673960|gb|CK062646.1|CK062646 57296rsicek_12603.y1 Oryza sativa cv. PA64s panicle ferile cDNA library Oryza sativa Indica G TCTTCCCTACTCCTCCCACTC EST sequence (targeted fragment marked with yellow): GCACGAGGGGATGACCGGCGGCGGCGCGGGGGAGGAGGAGGAGGAGGGAAGGGGGGCGCGGCGGCGGGCCCCGTCCCGGCGGCGTCGAGGAAGCTGGTGCAGAGCCTGAAGGAGATCGTGAACCGCCCGGAGGCGGAGATCTACGCGGCGCTGCGCGATTGCGGCATGGACCCCGACGAGGCGGTCAGCCGCCTCCTCTCCCAAGATACTTTTCAAGAGGTAAAGAGCAAGCGCGATAAGAAAAAAGAGGTTAAAGAGATTCCTGAGCCAAGATCTCGAGCGGCAAGTAATGCTGCCAGTCGAGGTGTAAGAGGCGGTGCAGATCGAGGCGGGCGAAACAGTTCTTTTCACTCTAGCTCCATTGACAATGTGGCTTCAAGGTCAATCTCAGGGCCTGGTATGACATCAACCAATTCCACTCAGAAGCAAACAATTCCAAGTTCCTTGGTAAACAAAAGTGTGGTTGCTGATGGACCGTCGGTACCTGCACAATCGTCATCTGGGTTTCAGCACGGTTGGTCTGGGACACCAGGTCAGTTGTCAATGGCCGATATTGTGAAAATGGGCAGGCCTCAGGTAAAGCAGTCCTCTAGCAAGCCTGCGGTTACTGCAGACAAAGGATATACTGGACAATACCCATCTTTGCCCAGTACTGTAAACCAGAATTTGAAACAA | |||||||||
gi|88434701|gb|CI690983.1|CI690983 CI690983 Oryza sativa (japonica cultivar-group) 3rd week immature panicle Oryza sativa Japoni TCTTCCCTACTCCTCCCACTC EST sequence (targeted fragment marked with yellow): GATCTTGTTGGAAAAAAATATCCACAGCTTCCCCACACGCCTCACCCACCTCTGGAGATCCGATCATCCATGCATGGCTGCTTCTCCCCTGCGCCTCCTCGCCATCGGCGCCGCTGCTGTACCTTTCATGCGTGGTAGCCGCCACCCGCGAGGACGACGAGCCGACGCCGTGTCTAGGCCGCCGAGATCATCGTCCTTCCTCTGCCAAAGCAGTTCGCCGAGCGAGCCGCCGGGATCGCCGGCCGGTGGCGGCGGCGGCGGCGGCGGCGGAGGAGGAGGAGGAGGAGGAGGGAAGAAGAGCGCGTGGTGGGCCGCCGCCATGGCCGACAGGGTGTTCGG | |||||||||
gi|218494281|gb|FG965182.1|FG965182 MA_LYP9_03966 Mature embryo cDNA Library of LYP9 Oryza sativa Indica Group cDNA 5', mRNA seq TCTTCCCTACTCCTCCCACTC EST sequence (targeted fragment marked with yellow): TCGAATCCACAGTCTCACACAGATCGCTTCATTTTTACACGAAGCCCCTCGCAATTCTTCGACCTCCTAAACTCCCCCATCGCGATCCCTCTCCTCCTCCTCCTCTTCCCCCAATCTCGCGCGACGCGGCGGAACCCTAGCCCCACCGCGATTCGCTCGCCGGAGAGGGAGAAGGAGGGAAGGGAGG | |||||||||
gi|117233942|gb|CT847644.1|CT847644 CT847644 Oryza sativa (indica cultivar-group) cv. Guang Lu Ai 4 Oryza sativa Indica Group cD TCTTCCCTACTCCTCCCACTC EST sequence (targeted fragment marked with yellow): ACAACACACAGCTCACTTCCCGCACGCATCCTCGCCCCCCAGATCCCATCTCGCCCTCGCCTCCGGGCGATGGCCACCGCCGCCACCGCCCAGGCCTCCGCCTCGTCGTACTACGGGCTTCGCTTGCTCCACAGCTTCCTCCACCCGGATCTCGTGCTTCGCCTCGAGCGCGGGGGTTGCCGCGGCACGGGTGCCGGCGCCGGGGGGCGGAGCTACGCGCTCGTGCCGGCCGACGAGCTCTCGCGTGTGCTCGCGAGGCAAAATTCTAGTTTGGCATTGCATAATAAACATTCATTTGCTGAGGATAGTGCTGGTGCGTACCCTTTGGTGCTTAGGATATCTGTTCGAGAAACAAGCATTTTGACTGTGAAGATCAGCAAAAAGGACAATCCAGTTGAGAACTATAAACGGGCATACAAGATTTTTAATATTGATTCTCAACCAGTTCATGTTTGGGATTTTTCAGGCCAGACAAACCTAATATTAATGAATGAGTGGAATAGGTCAAATCATGACTGCTGCCACTCAGAGCTAGAGAATATTCTTGAAGTGCAAGTCTATGCAATGTCTGACTCCTTAACTTCCAAGATTGGTGGAACCAGCAAAGAGTATACAGAACAATCTTCTGCAGATGTTAATGATATGGATGTTGATTTTGTCTATGGAAGCTTTGGAAGATCTAGCTCGCATGGGCTAATTGGATTGGAAAATCTTGGGAATACTTGCTTTATGAACAGTTCAATTCAATGTTTGGCCCACACATCAAAGCTTGGTGAATATTTCCTAGGAAATTATGACAGGGAATATAAATCGAACTAACCCCCTAAGACTGAATGGGGGAACTTGTTTGGGATTTTGGAAATTAATGAGGAAATTTAGGAAAACCCAAAGAAAAAACATTTTTCCCCAATCCCTTTTTAAGGGCAAAAATTGGTTGGGTTTTTGCCCCCCAATTTTTCCGGGGGTTTTCAAACCCACCTGGAATTTCACAGGGGACCTTTTTTTGCTTTTTTTTTTTTGGGGGGGGGGCCCCCCCCTGGAAAAAATTTTTTTAACCCCCGGGGCTAAAGGGGGGCAAAAGCCCCCTTTTATAAAAAAAAAAAAACCCTAAAAGGGGGGGTGGGCCAAGGGGGGGGGGGGGCCGCCCCCCCCCCGGGAGAAAAAAAAAAAAAAAAAAAAGGGGGGGGGGGGTGGGTGAAGTAGGAAAGAGAAGAAAAATCATACTGG | |||||||||
gi|88399269|gb|CI618459.1|CI618459 CI618459 Oryza sativa (japonica cultivar-group) callus Oryza sativa Japonica Group cDNA clone TCTTCCCTACTCCTCCCACTC EST sequence (targeted fragment marked with yellow): GGGTTTCCCCCGCCCCCCGGCCCGCGGCTCCACCGCCCCACGTACCCATGGCGTTGCCGAGGTGGCTCCCATGATGCGCTCTCGCCGCCTCGCCATGTGACCCGCGCGCCACGCCGCTTTTCCGAGACCGAGAGACGGAGAGAGAGAAAAAAAAGTAGAGATCCACGCCGCATTCTCCATTTCTCCCCCTCCCGGCTGCAGCTCGCCGTATCCTGCTTTCTTGCCTTGCGGGCGTCGTCGTAGCGTGGTAGGAGTAGGGGAGCCCGGCGCGCGGGCGGGCGCGGGTGGTTGGTGAGTGCGCGCGCAACGCGCACAGCAGCAGCAGCGGGAAAAAAAAAAGGCTAACTAAGCTAGGACAGAGGAGAGAAAAGCCGTGGCCGCTTTGCGG | |||||||||
gi|86905419|gb|CI285382.1|CI285382 CI285382 Oryza sativa (japonica cultivar-group) etiolated shoot Oryza sativa Japonica Group c TCTTCCCTACTCCTCCCACTC EST sequence (targeted fragment marked with yellow): AAAACACAGCTTCCCCACACGCCTCACCCACCTCTGGAGATCCGATCATCCATGCATGGCTGCTTCTCCCCTGCGCCTCCTCGCCATCGGCGCCGCTGCTGTACCTTTCATGCGTGGTAGCCGCCACCCGCGAGGACGACGAGCCGACGCCGTGTCTAGGCCGCCGAGATCATCGTCCTTCCTCTGCCAAAGCAGTTCGCCGAGCGAGCCGCCGGGATCGCCGGCCGGTGGCGGCGGCGGCGGCGGCGGCGGAGGAGGAGGAGGAGGAGGAGGGAAGAAGAGCGCGTGGTGGGCCGCCGCCATGGCCAAGCAGAAGGGGGACTGGAAGGACGTCACGCTCATGAGCTTCTCCTTCGCCGTCTACGTCTACATCTCTCAGAAGATCGTGTGCACATATTGCGCCTGGATCTCCATGATCAATCACTAGCTAGACACAGTATATCTTTCCAGTAGTTGCATATACTCCTATATATGAACATATATACTGTAAGTTTCTGTAGTGGCAATAAAACTGACGCTTGTTTGGTGTTAAAAAAAAAAAAAAAAAAAAAAAAAAAAA | |||||||||
gi|88367929|gb|CI572650.1|CI572650 CI572650 Oryza sativa (japonica cultivar-group) shoot Oryza sativa Japonica Group cDNA clone TCTTCCCTACTCCTCCCACTC EST sequence (targeted fragment marked with yellow): GTTGTGGAGATGGACCCCAAATTCCCCCCACCCCCACCGCTAAACAAAACGGAGCCCACCACCACCACCACCAACCAGCAGCATCACCACGATGAGCAGCAGCAGCAGCATCGCCTCCAGATTCAAGTTCATCCTCAGCAGCAGGAGCAGCAGGATGGAGGTGGAGGAGGAGGGAAGGATCAGAAGCAGCAGCAGCAGATGCAGGTGGTGGTTGCGGCGGCGGCGGGGGAGAGGAGGATGCAGGGGCTAGGGCCGAAGCGGAGCTCGAACAAGGACCGCCACACCAAGGTGGACGGGCGGGGGCGGCGGATCCGGATGCCGGCGCTGTGCGCCGCCCGGATCTTCCAGCTCACGCGGGAGCTCGGCCACAAGTCCGACGGCGAGACCGTCCAGTGGCTGGTCCAGCAGGCGGAGCGG | |||||||||
gi|88719407|gb|CI742917.1|CI742917 CI742917 Oryza sativa (japonica cultivar-group) 1 day after pollination pistil Oryza sativa J TCTTCCCTACTCCTCCCACTC EST sequence (targeted fragment marked with yellow): TTCGCCTTCCATTCCATGGCCACCACAGACACCGCCCCCCGCCTCGCGCTCCTCCTCCGCCCCGCCATGGCCTGACCTGACCTCCCCCACAACCTGCGGCCTACGAATCGATCGGGAGAGGGGGTTCTCCTTCCTTTCCTCGACCTGCTGCTGGTGGGTTGGTGGTTTCTGCGGGGGGAGGCGGCGATGAGGGGAGGAGGAGGAGGAGGGAAGGAGGTGGAGGACAGGGGGAAGGTGATGGGCCCGCTGTCCCCGCGGCTCCACCTCCACGACGCCGCCCAGGGCGGCGGCCCGCGGGCGCCGCCCACGAACAACATGGCGCTCTACGAGCAGTTCACCGTGCCGTCCCACCGCTTTAGCGGCGGAGGCGGTGNGCTCGTCTTGGT | |||||||||
gi|58668167|gb|CK056853.1|CK056853 59993rsicek_16490.y1 Oryza sativa cv. PA64s panicle ferile cDNA library Oryza sativa Indica G TCTTCCCTACTCCTCCCACTC EST sequence (targeted fragment marked with yellow): CTGCAGGAATTCGGCACGAGGGTCGGGAAGAGCACCCAAACCCTCGCTTCCTCCCTCGCAAACCCTAGCGCCCGGACGAGGAGGAGGTGGGTTCCGGTGGTGGTTTGCCGTCCGACGATGTCGAGCAACCTAGCCGCCTCCCGCCGCTCGTCGTCGTCGTCCTCGGTGGCGGCGGCGGCGGCGAAGCGACCCGCGGTGGGGGAGGGAGGAGGAGGAGGAGGGAAGGCGGCAGCGGGCGCCGCCGCGGCCAAGAAGCGCGTGGCGCTCAGCAACATCAGCAACGTCGCCGCCGCCGCTGGTGGTGGTGGTGGCGGTGGCCCCCCAGGGAAGGCCGGCAATGCGAAGTTGAATTTAGCTGCCTCAGCTGCACCAGTGAAGAAGGGATCTGTGGCCAGTGTCCGCAATGTGGGCACGAATCGGGCCTCGGCGGTGAAATCGGCTTCCACCAAGCCGGCTCCGGCCATATCCCGCCATGAGAGCGCTGCACAGAAGGAGTCTGTTCTTCCTCCTAAAGTGCCTAGCATTGTGCCGACTGCTGCACTGGCACCTGTCACTGTACCCTGCAGCAGCTTCGTCTCCCCTATGCATTCAG | |||||||||
gi|88573414|gb|CI664985.1|CI664985 CI664985 Oryza sativa (japonica cultivar-group) 11 days after transferring callus Oryza sativ TCTTCCCTACTCCTCCCACTC EST sequence (targeted fragment marked with yellow): TCTCTCTTCTCCTCTTCTTGCACCTCCTCACCTTCTCCTCTCCTCTCCTCTTCTTCTCCATCACCATCCACCCATCCAACTGGTCCAACTCCTCCAATCGTTTGCTTCTTCTTCTTCCTCTTCTCGCTGTTCTTGGTGGAGGAGGAGATTAGGGTTTGATTAGGGTAGATAGAGAGAGAGGGGTTGGGTTTGGTTGGTGTTTGTGTGGAGATGGACCCCAAATTCCCCCCACCCCCACCGCTAAACAAAACGGAGCCCACCACCACCACCACCAACCAGCAGCATCACCACGATGAGCAGCAGCAGCAGCATCGCCTCCAGATTCAAGTTCATCCTCAGCAGCAGGAGCAGCAGGATGGAGGTGGAGGAGGAGGGAAGGATCAGCAGCAGCAGCAGCAGATGCAG | |||||||||
gi|44679163|gb|CR292597.1|CR292597 CR292597 Oryza sativa library (Han B) Oryza sativa cDNA clone y738a11p5, mRNA sequence TCTTCCCTACTCCTCCCACTC EST sequence (targeted fragment marked with yellow): ATGGCTGGCGATTGGGGAGTGAGCATGTGAATAAAAAGCTCGGGATGGATTTTGGAGTCTTTGTGCGAGCCGTATGCGGTGAGAGTCGCACGTACGGTAAGGAGGGGGGTTCGCGTCTATACGTGTAGTGTGGTGGTTGGGCCTACCCACCCTATTTGTTCCATGATCTATGGGTCTACTGGAGCTACCCACTTCGATCAATTAGCCAAGATTTTGACCGGATACGAAATCACTGGTGCTCAATCTAGTGGTATTTTTATGGGGATTCTTTTTATCGCTGTAGGATTCCTATTCAAGATTACTGCAGTTCCTTTTCGGGCGGCTGTAGGACGGACGGCCCCCTATAGGTAGTAGGGTAGGATGGGTGGTACCGCTCAGATAGCGGCCAATCCTCCTAACTGCGCGCGGGCCGGGCTTAGAGCGCGTGAAACTCATCACTACCTCGTAAGGGCGTTGAGACCATAGCATGTTACACAAAAGCGCCGCTTTCTCAGGAGTGTTGTCACACAGCTGCCCGACTAGAAGAGCTACTCGCTCTGTAGTGTTGTCACACAAGATAAGCACGCCGCCCGCCTGCTGACCGGGCGAATCGAAGTTATCTTCCGGTCAAGTGTCCACCCAGTCAAGTGGAAAAAAACAGTGGAATTAAGCAAGGCAGTGGTGGTTTGATTCTGGCCAGATGAAAGAAAAGGAAAGGGTCAGATTGAGTGGTTGGAGTGGGGAAGTGATTTCCAAAA | |||||||||
gi|117216284|gb|CT857838.1|CT857838 CT857838 Oryza sativa (indica cultivar-group) cv. Guang Lu Ai 4 Oryza sativa Indica Group cD TCTTCCCTACTCCTCCCACTC EST sequence (targeted fragment marked with yellow): GTCGCGTTTCGCCTTCTTATTTTCTCTTCGCTTCGTCCCCCGCATCGACACGCACGCACACCAGCAGCACAAGCACCCAAACCCTAGCTCGCGGCCGCGGCGAATCCTGCGCGCGCGAGAGAGACCCCGGCTGATGGTTTCGATGAGCGCGACGCCCAATCCGATCGATGCCTCCGTCGTCTCCGCCGCCGCCGCCGTCGCGGGCGGCGGGGGAGGTGGGGATGGGGGAGGGGGAGGAGGAGGGAAGGAGAAGGAGAAGCAGGTGGTGGCTGCGCCGCTGCAGCCGCCGATGGCCGTGCCTGCACCGGCGGCGGCGGTGGGGGAGGAGGCGAGGAAGGAGGAGGAAGAACAGCTGAAATAAGCTTGTCCTAGCATGGGGCTGGCATTGTGGCTAATAAACCTTGTGGTTGGTGCTCATGTTACTGATGGAGTATATTGTAGAAGCAGATTTATGTTCATTAAGAAATAAATATCGCTTGTTGGGGATGAAAAAGAAAAAAAAATGTAGAGGAAGATACAAATACTATCGCGATCACCGCGCGAGAGAAACTAAGTACTACCAGCGTGGGCCCGAAAATTTATCTAGTGCGGATTAAATACCTCCCCCTGAATGGGAAGGGCAATGCGCACAAAATCCATTGTGTCTGTTTTTGGATCTCATTCAGGGGGGGAATGCACTGTGTGTACTAATCTACTGGAACTGGCGGCGCACCCGTTCTCACGGAGCGAGCTGTTAAGACTGATAAATGATGGATAGAAAATTATTAAAATAGAAGTAGGTAATAAGATAATTGGAAATTGGTGTTCCCTAACCATGATGCACTATAGTAGTCAGCTTGTGACTTAATGTACTATAATATGTAGTGATAGAAACATAGCGGAGCCAAGGACCACAATGACCCACACAGGCAGTGATACAGCAAATTGCTAAGATCCGGCGGGATGGGGCAACTACTCACGACCCAGTGCTGTCGCCATCATGTATGGTACACCCGATTGAGAGTTGCTCCATCCACTCATAGATGTTTACAGCGTTTGTATAGTTTCGTTCCTATACTCTGCACTGCTGAGCCAGGCAAGCACACCATGGACATGCGGAGAGCACTGTACTGAAATGGTGCACTCGACAACGAATAGGCGAACGGATAAGGAGGTCGCGAAGCTGAACACTCGAAAAGATATGGAACGAGGGCGACGGTTAGCGACGCAATAGGTCAGGCGGATGGAAAGCGCGTGATCTATGTCACTACAAGATCATG | |||||||||
gi|88351116|gb|CI623338.1|CI623338 CI623338 Oryza sativa (japonica cultivar-group) callus Oryza sativa Japonica Group cDNA clone TCTTCCCTACTCCTCCCACTC EST sequence (targeted fragment marked with yellow): GAGGGTTTTGGAATTAGAAGCCGCCGTTGCGTGGGAGAGCAAAGTGGAAGCAGCCGAAACCGAGGATGACCGGCGGCGGCGCGGGGGGAGGAGGAGGAGGAGGGAAGGGGGGCGCGGGGGCGGGCCCCGTCCCGGCGGCGTCGAGGAAGATGGTGCAGAGCCTGAAGGAGATCGTGAACCGCCCGGAGGCGGAGATCTACGCGGCGCTGCGCGATTGCGGCATGGACCCCGACGAGGCGGTCAGCCGGCTCCTCTCCCAAGATACTTTTCAAGAGGTAAAGAGCAAGCGCGATAAGAAAAAAGAGGTTAAAGAGATTCCTGAGCCAAGATCTCGAGCGGCAAGTAATGCTGCCAGTCGAGGTGTAAGAGGCGGTGCAGATCGAGGCGGG | |||||||||
gi|117240924|gb|CT842891.1|CT842891 CT842891 Oryza sativa (indica cultivar-group) cv. Guang Lu Ai 4 Oryza sativa Indica Group cD TCTTCCCTACTCCTCCCACTC EST sequence (targeted fragment marked with yellow): ATAGTCAGGAGCTACTTATCCCCTCCAATTCTCCATCTTGTTGGGAAAAAATATCCACAGCTTCCCCACACGCCTCACCCACCTCTGGAGATCCGATCATCCGTGCATGGCTGCTTCTCCCCTGCGCCTCCTCGCCATCGGCGCCGCTGCTGTACCTTTCATGCGTGGTAGCCGCCACCCGCGAGGACGACGAGCCGACGCCGTGTCTAGGCCGCCGAGATCATCGTCCTTCCTCTGCCAAAGCAGTTCGCCGAGCGAGCCGCCGGGATCGCCGGCCGGTGGCGGCGGCGGCGGCGGCGGCGGCGGAGGAGGAGGAGGAGGAGGGAAGAAGAGCGCGTGGTGGGCCGCCGCCATGGTCGAGAGGGTGTTCGGCGACGCGGCGAAGGCCGGGAGGGCGGTGCGGGAGAGCCTGAGCCCCAAGCAGAAGGGGGACTGGAAGGACGTCACGCTCATGAGCTTCTCCTTCGCCGTCTACGTCTACATCTCTCAGAAGATCGTGTGCACATATTGCGCCTGGATCTCCATGATCAATCACTAGCTAGACACAGTATATCTTTCCAGTAGTTGCATATACTCCTATATATGAACATATATACTGTAAGTTTCTGTAGTGGCAATAAAACTGACGCTTGTTTGGTGTTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGCCCTAAAAAAAAAAAAAAAAAAAAGGGCCAGCTTGGCCTCAAGGGGGGGCCCGGTACCCAATTCCCCCTTAAATGGAGTCGTATTACGCGCGC | |||||||||
gi|88331361|gb|CI675692.1|CI675692 CI675692 Oryza sativa (japonica cultivar-group) library (Kikuchi S) Oryza sativa Japonica Gro TCTTCCCTACTCCTCCCACTC EST sequence (targeted fragment marked with yellow): GGTGGTATCTTTCCCAAGATTTTCTTATTCTTCTTCTTCTCCTCCTCTCTCTTCTCCTCTTCTTGCACCTCCTCACCTTCTCCTCTCCTCTCCTCTTCTTCTCCATCACCATCCACCCATCCAACTGGTCCAACTCCTCCAATCGTTTGCTTCTTCTTCTTCCTCTTCTCGCTGTTCTTGGTGGAGGAGGAGATTAGGGTTTGATTAGGGTAGATAGAGAGAGAGGGGTTGGGTTTGGTTGGTGTTTGTGTGGAGATGGACCCCAAATTCCCCCCACCCCCACCGCTAAACAAAACGGAGCCCACCACCACCACCACCAACCAGCAGCATCACCACGATGAGCAGCAGCACCAGCATCGCCTCCAGATTCAAGTTCATCCTCAGCAGCAGGAGCAGCAGGATGGAGGTGGAGGAGGAGGGAAGGATC | |||||||||
gi|88310648|gb|CI672509.1|CI672509 CI672509 Oryza sativa (japonica cultivar-group) 3rd week immature panicle Oryza sativa Japoni TCTTCCCTACTCCTCCCACTC EST sequence (targeted fragment marked with yellow): GATCTTGTTGGAAAAAAATATCCACAGCTTCCCCACACGCCTCACCCACCTCTGGAGATCCGATCATCCATGCATGGCTGCTTCTCCCCTGCGCCTCCTCGCCATCGGCGCCGCTGCTGTACCTTTCATGCGTGGTAGCCGCCACCCGCGAGGACGACGAGCCGACGCCGTGTCTAGGCCGNCGAGATCATCGTCCTTCCTCTGCCAAAGCAGTTCGNCGAGCGAGCCGCCGGGATCGCCGGCCGGTGGCGGCGGCGGCGGCGGCGGCGGAGGAGGAGGAGGAGGAGGAGGGAAGAAGAGCGCGTGGTGGGCCGCCGCCCATGGCCGCACAGGGTGTTCGGCGACGCCGCGACGGCCGGGAGGGCGGTGCGGGAGACCCTGAGCACCAACCACAAGGGGGACTGGAAGGACGTCC | |||||||||
gi|58673144|gb|CK061830.1|CK061830 57610rsicek_12989.y1 Oryza sativa cv. PA64s panicle ferile cDNA library Oryza sativa Indica G TCTTCCCTACTCCTCCCACTC EST sequence (targeted fragment marked with yellow): GCACGAGGCCCAATCTCGCGCGACGCGGCGGAACCCTAGCCCCACCGCGATTCGCGTCGCCGGAGAGGGAGAAGGAGGGAAGGGAGGCTAGGGGACCCCCTCGCCGGCGGCGGAGATGGAGGTGAAGCTGTGGAACGACAAGCGGGAGCGGGAGCTCCTGGAGAGCCTCGCCGACCTGTACGCCATCATCAAGGCGACGGAGAAGCTGGAGCGCGCCTACGTCCGCGACCTCGTCTCCGCCGCCGACTACGAGGCCGAGTGCCTCAAGCTCATCTCCCAGTTCAACTCCCTCTCCTCCTCGCTCGCCGGCGTCGTCACCATCCCCCGGTTCGTCGAGGCCTACCGCCTCGACTGCCCCGCCGCCCTCAACCGCCTCGTGCAGTCTGGCGTCCCCGCCACCGTCGAGCTCCGCGCTGCGGCGTCCTCGTCCGTGCCGGCCTCCTCGGCGGCGTCCGCGGCCGCCATCGCCCAGTGCGTCCAGAGCTTTATTACCGCCATGGATGCCGTCAAGCTCAACATGCTCGCCAACGACCAGGTC | |||||||||
gi|218500378|gb|FG965724.1|FG965724 MA_LYP9_04508 Mature embryo cDNA Library of LYP9 Oryza sativa Indica Group cDNA 5', mRNA seq TCTTCCCTACTCCTCCCACTC EST sequence (targeted fragment marked with yellow): ATTCCAGTCTCACACAGATCGCTTCACTTTTACACGAAGCCCCTCGCAATTCTTCGACCTCCTAAACTCCCCCATCGCGATCCCTCTCCTCCTCCTCCTCTTCCCCCAATCTCGCGCGACGCGGCGGAACCCTAGCCCCACCGCGATTCGCTCGCCGGAGAGGGAGAAGGAGGGAAGGGAGGCTAGGGGACCCCCTCGCCGGCGGCGGAGATGGACGTGAAGCTGTGGAACGACCAGCGGGAGCGGGAGCTCCTGGAGAGCCTCGCCGACCTGTACGCCATCATCAAAGCGACGGAGAAGCTGGAGCGCGCCTAC | |||||||||
gi|42793912|gb|AB117811.1|AB117811 AB117811 ZAPII rice Oc cDNA Oryza sativa Indica Group cDNA clone 8C06-31D04, mRNA sequence TCTTCCCTACTCCTCCCACTC EST sequence (targeted fragment marked with yellow): TGGCAGCTTAGCTTACCCTATCTTACACGGCAGAGGCAGGGGTTTGTTTGATTGGTTGATCGATCGATTGACGAGATGAGCAGCAGCTCGTACGGGACGTNGTGGGCGGACCAGTGGGACTACGGCAGCGACCCGCCGCCGCCGTCGTCGTCGTCGGGGAAGAGGAGCGGCGGCGGAGGAGGAGGAGGAGGGAAGAAGGGTATGGAGAAGACGAAGGCGGCGGCGGCGAGCGGGCTGAGGAAGGTGAAGGAGGGGACGGCGCATGGGTTCCAGTGGATCAAGGACAAGTACCAGCAGAAGAAGTCCGGTGGCAAGAAGCACGGCGACCAGCAGAGCTCGGAGATCGCCGGCTACTGATCGTTGATACCACATCATATCGTTGATGATGATTTGAGGTGTTCTTGCGTGTAGATAGGTCGATCGGGGGTCATTCTTTGGACCGATCGATATATGGACGTTAATTTGTTCGTCTTTGTGTGTTATTTGTATATAGGCCTCGTGCCGAATTCNGNACGAGGGACCGATCGAGCAGAGGAAGCANNCCATCGCGCAAGCCAAACCAAAGCNC | |||||||||
gi|88447568|gb|CI584572.1|CI584572 CI584572 Oryza sativa (japonica cultivar-group) shoot Oryza sativa Japonica Group cDNA clone TCTTCCCTACTCCTCCCACTC EST sequence (targeted fragment marked with yellow): GATGGCCCACCACAGACACCGCCCCCCGCCTCGCGCTCCTCCTCGCCCCGCCATGGCTGACTGACCTCCCCACAACCTGCGGCTACGAATCGATCGGGAGAGGGGGTTCTCCTTCTTTCTCGAACTGCTGCTGGTGAGTGGGTGGTTTCTGGGGGGGGAGGAGGCGATGAGGGGAGGAGGAGGAGGAGGGAAGGAGGTGGAGGACAGGGGGACGGCGATGGCACGGCCGCCCCCGCCCCTCCCCCCCCGACCACCACGGCCGGGGCCCCGGCCGCCCCCACCAACAACATGGCGCTCTCCCCCCACCCCCCGGCCGCTCCCCGCTCCAGTCGCCGGAGGCGGCACCCCTCGACCTCGGCTGGGGGTTGCCCTGCCCGGGCTTGCGTCGGCGGCGTCCCTCGAGGCGG | |||||||||
gi|88371386|gb|CI600234.1|CI600234 CI600234 Oryza sativa (japonica cultivar-group) flower Oryza sativa Japonica Group cDNA clone TCTTCCCTACTCCTCCCACTC EST sequence (targeted fragment marked with yellow): GGTAGCTTCCTTCGCCTTCCATTCCATGGCCCACCAAAGACACTGCCCCCTGCCTCGCGCTCCTCCTCTGCCCTGCCATGGCCTTGACCTTGACCTCCCCCACAACCTGCGGCCTACGAATCGATCGGGAGAGGGGGTTCTCCTTCCTTTCCTCGACCTGCTGCTTGCTGGGTTTGGTTGGTTTCTTGCGGGGGGAGGCGGCGATGAGGGGAGGAGGAGGAGGAGGGAAGGAGGTGGAGGACAGGGGGAAGGTGATTGGTGCCCTGCTGTTCCCGCGTGCTCACGTC | |||||||||
gi|88587585|gb|CI705342.1|CI705342 CI705342 Oryza sativa (japonica cultivar-group) 3rd week immature panicle Oryza sativa Japoni TCTTCCCTACTCCTCCCACTC EST sequence (targeted fragment marked with yellow): GATCTTGTTGGAAAAAAATATCCACAGCTTCCCCACACGCCTCACCCACCTCTGGAGATCCGATCATCCATGCATGGCTGCTTCTCCCCTGCGCCTCCTCGCCATCGGCGCCGCTGCTGTACCTTTCATGCGTGGTAGCCGCCACCCGCGAGGACGACGAGCCGACGCCGTGTCTAGGCCGCCGAGATCATCGTCCTTCCTCTGCCAAAGCAGTTCGCCGAGCGAGCCGCCGGGATCGCCGGCCGGTGGCGGCGGCGGCGGCGGCGGCGGAGGAGGAGGAGGAGGAGGAGGGAAGAAGAGCGCGTGGTGGGCCGCCGNCATGGCCGAGAGGGTGTTCGGCGACGCGGCGAAGGCCGGGAGGGC | |||||||||
gi|88851432|gb|CI670872.1|CI670872 CI670872 Oryza sativa (japonica cultivar-group) library (Kikuchi S) Oryza sativa Japonica Gro TCTTCCCTACTCCTCCCACTC EST sequence (targeted fragment marked with yellow): GGGTCCAACTCCTCCAATCGTTTGCTTCTTCTTCTTCCTCTTCTCGCTGTTCTTGGTGGAGGAGGAGATTAGGGTTTGATTAGGGTAGATAGAGAGAGAGGGGTTGGGTTTGGTTGGTGTTTGTGTGGAGATGGACCCCAAATTCCCCCCACCCCCACCGCTAAACAAAACGGAGCCCACCANCACCACCACCAACCAGCAGCATCACCACGATGAGCAGCAGCAGCAGCATCGCCTCCAGATTCAAGTTCATCCTCAGCAGCAGGAGCAGCAGGATGGAGGTGGAGGAGGAGGGAAGGATCAGCAGCAGCAGCAGCAGATGCAGGTGGTGGTTGCGGCGGCGGCGGGGGAGAGGAGGATGCAGGGGCTAGGGCCGAAGCGGAGCCTCGAACAAGGACCGCCACACCAAG | |||||||||
gi|88445707|gb|CI546844.1|CI546844 CI546844 Oryza sativa (japonica cultivar-group) root of seedling gamma-irradiated (4min), aft TCTTCCCTACTCCTCCCACTC EST sequence (targeted fragment marked with yellow): GGATCAAAGTGTAATTCACTGCTCATCATATTCACAAGTAGTCAAATAAGGTGACCAATTAATAAACCACAAATCCACAGTACCCTCAAGTTGCAAGTCACAAAGACTGCAACTACCAATCTCATTTACATCACAGACTATAGTTTGTTTGCACTGGACCCAACCAAGCCAACACTTTTTTTTTCCTTTTTAGATACTACATCCGTCCCAAAATATAGCAACTTTTAGCTATGAATTTGGATACACAATTGTCCAGATTTATAGCTAAAAATATTTATATTATAGGGTGGAGGGAGTAAGGAAGATGATTATATCGCTTATGGCCGCGCGATCTCCAAAGGCTCACGTAAGACGTGACCGGCGCCACCTTTCCCAGCCTCCACGTCGTTGT | |||||||||
gi|58586080|gb|CF984388.1|CF984388 16589rsicee_14126.y1 Oryza sativa cv. LYP9 tillering whole plant cDNA library Oryza sativa In TCTTCCCTACTCCTCCCACTC EST sequence (targeted fragment marked with yellow): GCACGAGGGCAGACGCTGGAGAGCACGTGGAAGGCCATCACGGAGGGGCGGGCGCCGCCGCTGGCGCGGCATCTCAAGAAGTCGGACACCTCGGAGACCCGGCCCGGCCGCCGCCAGTCCGGCAGCGGAGGTGGCGAGGACGCGCCACCGCCGGCGACGGCGATGCGGAAGGCGGAGACGTTCAACGAGGCCGCCGGAGGAGGAGGAGGAGGGAAGAAAGTTGCGGCGGGAGCCGTCGCTGGGGCAGGACGAGCTGAACCGGAGGGTGGAGGCGTTCATCAACAAGTTCAACATGGAGATTCGGCTGCAGCGGCAGGAGTCGCTCAAGCACTACAACGAAATGATCAGCAG | |||||||||
gi|29631601|gb|CB636610.1|CB636610 OSJNEa02E22.f OSJNEa Oryza sativa Japonica Group cDNA clone OSJNEa02E22 5', mRNA sequence TCTTCCCTACTCCTCCCACTC EST sequence (targeted fragment marked with yellow): CACAGACACCGCCCCCCGCCTCGCGCTCCTCCTCCGCCCCGCCATGGCCTGACCTGACCTCCCCCACAACCTGCGGCCTACGAATCGATCGGGAGAGGGGGTTCTCCTTCCTTTCCTCGACCTGCTGCTGGTGGGTTGGTGGTTTCTGCGGGGGGAGGCGGCGATGAGGGGAGGAGGAGGAGGAGGGAAGGA | |||||||||
gi|117219971|gb|CT858531.1|CT858531 CT858531 Oryza sativa (indica cultivar-group) cv. Guang Lu Ai 4 Oryza sativa Indica Group cD TCTTCCCTACTCCTCCCACTC EST sequence (targeted fragment marked with yellow): TCCCGGTGGAGCAGTGCGACCCGGGCGACGCGGCGGCGAACAGCGCGTGCATGGACGTGTGCCACTACGGCGGATGCCGGCGCGGCGGCGAGTGCGTCTCCCTCGGCTTCGGCCGCGGCCGGGGATGCCACTGCGGGTGGGGGGAGCTGAACTGAGCTGAGCTGATCTCTGATCTGAACTGAACTGATATGCTAATCAAGTTGAACAAACCTAGTAGAACGCGCTAATTCCGATAGAATCCCTTGGTGAGCACTACGCGGCTGGTCCGAGATGCTCGAGGACCTATTGTCGGGTGGCGAGGTGGCGGAGAGCATTAGCGGGTGTATTGGGGTCCGCGGTTGCTGGCGGAGGGGGGGGGGGGGGGGGGAAAACCCCCCCCGTGGACGGGGAGGTGGGGGGGGGCCGGGACACGGGGAGGGGGGGAGATGAGGAAAAGGGGAACGGGTGAAGGGGCGGAAGCCGATGGGTGGCGGGGTAGAACGGGGAGCAGGGGGGAGGGGGCGGGCGGGGGGTCGGGAATGAGTGAGGGAGGGAGAAAGGGGGCAAAGGAGGGGCAGGGGGAGCGGGGACGAGCGGGGGGGGGGGGAGAGGGGGGCGAGGGTGGGAGGAGAGGGGGGCAGAAGTGGGGTCCGCAACGGAGGCGCGGGAGCGGGGGGAGAGGGGGGAAACTAGAACGGCGGGAGGAGAGGGGGGGGGGGGGGAGGAAGGGGTGAGAAAGGAGGGACGGGGGGGGAGGGGGGGGGAGGAGAGAGAGGGGGGGGAGGGGGGAGTGGAGAGGGGAGGGGGAATGGGGGGGGGAGGGGGGAGGGGGGAGGGAAGGGGGGGAGGGGGGAAAGGGGGGGCGGGGAGACGGGAAAAGCAACAGAATGGGAGGCGGGGGGAGGAAGGGGGGGGGGGGTGGGGGGAGGAGGGAAGAACGAGAGTAGACAAGCGAAGGGGGGGGGGGGGGGTGGGGGGGGAGGGGGGGGCAGGAGCGGAGAGGGGGGGGGGGGGATGCGGAGAAGGAAGAAAGAAGGGTGGGGGGGGGGCGGGGGGCGGGCGAACCTAAGCCTGAGGGGGTGGGGGGCGGGGAAGTACGGGGGGGGAGGAGGGAAGGAGGCGGGGGAGAGGAAGGCGGGGAGGGGCGGGGGGGAGAGAGGGAGCGAGGGGAGAAGGGGGGGGGGGGGAGGGAGGGATGTAGAGTGGAGGCGGCGTGCGCAGGGAGAGAGGGAGCGGATGCTTAGAGGAGAAGTTAGTGAGTTCAAGAGGGTAGAAACGTAAGAGGTAATGAGGGGCAGGGATGACGTGGAT | |||||||||
gi|86902521|gb|CI304340.1|CI304340 CI304340 Oryza sativa (japonica cultivar-group) cold treated callus Oryza sativa Japonica Gro TCTTCCCTACTCCTCCCACTC EST sequence (targeted fragment marked with yellow): CCCAATCCCCCTGGCCTCTGTCGGGAAGAGCACCCAAACCCTCGCTTCCGCCCTCGCAAACCCTAGCGCCCGGAGGAGGAGGAGGTGGGTTGCGGTGGTAGTTTGCCGTCCGCCGATGTCGAGCAACCTAGCAGCCTCCCGCCGCTCGTCGTCGTCGTCCTCGGTGGCGGCGGCGGCGGCGGCGAAGCGACCCGCGGTGGGGGAGGGAGGAGGAGGAGGAGGGAAGGCGGCAGCGGGCGCCGCCGCGGCAAAGAAGCGCGTGGCGCTTAGCAACATCAGCAACGTCGCCGCTGGTGGTGGCGCCCCAGGGAAGGCCGGCAATGCGAAGTTGAATTTAGCTGCCTCAGCTGCACCAGTGAAGAAGGGATCTTTGGCCAGTGGC | |||||||||
gi|29633252|gb|CB638261.1|CB638261 OSJNEa06F22.f OSJNEa Oryza sativa Japonica Group cDNA clone OSJNEa06F22 5', mRNA sequence TCTTCCCTACTCCTCCCACTC EST sequence (targeted fragment marked with yellow): CACAGACACCGCCCCCCGCCTCGCGCTCCTCCTCCGCCCCGCCATGGCCTGACCTGACCTCCCCCACAACCTGCGGCCTACGAATCGATCGGGAGAGGGGGTTCTCCTTCCTTTCCTCGACCTGCTGCTGGTGGGTTGGTGGTTTCTGCGGGGGGAGGCGGCGATGAGGGGAGGAGGAGGAGGAGGGAAGGTGGATACTTTTGTTTCTCAAATTCCTTCCCGCGT | |||||||||
gi|117233051|gb|CT854914.1|CT854914 CT854914 Oryza sativa (indica cultivar-group) cv. Guang Lu Ai 4 Oryza sativa Indica Group cD TCTTCCCTACTCCTCCCACTC EST sequence (targeted fragment marked with yellow): ACGAGATCCAGCTTAGCTTAGCCTACCTTACACGGCAGAGGCAGGCAGGGTTTGTTTGATTGGTTGATCGATCGGTTGACGATCGAGATGAGCAGCAGCTCGTACGGGACGTCGTGGGCGGACCAGTGGGACTACGGCAGCGACCCGCCGCCGTCGTCGTCGTCGTCGGGGAAGAGGAGCGGCGGCGGAGGAGGAGGAGGAGGGAAGAAGGGTGGTGGGGTGGAGAAGACCGAGGTGGTGGTCGTGAGGGTCGTGAGGGAGCGATCGACGATACAGCGCATCGCTGCCTGTGTATGACGGGTAAGGACGGCCAAGCGAAGTTGGGTCGCGTGAACGTCGTCGCGACTGGCCTGGATGGGATATCGACTTGCTAGTAGCTCCGGGGGATTACTACGTCCTAGAGCGGGTGCGGGTGGAGATGTTGCGGTGGCTTTTCGTGCTCTATAGTGCGAGGTATTAGGGGTCATTTCTTTGGACCGGATCGATATATGGACGTTAAATTGGTTCGTAAGTTGTGTGGTAATTTGTATATTAGGGAGAATGGGTCGCTCCTTGGTTCCGCAAGTTTGGGTATGGATTCCTGGTTAATTTTTTTTCCGCTTTGTAAGATACTAAAACGAGATTTGGGAATCTGGCTTACTTCTGGTGGCCGTTGATTTATATTTTTGGGCTCCGCTCCCTATGGGATGTGCAAATACCGCGCGATTATAAATCCTTCCTGGCCAGCTCTATTCCGAAATACAGAAACCCAGGAATGATTTGAATCGGGTAATTACAATAAATGTCAACCTACTCCTCTATAAACGACTATACTCTCAATATGTACATGAGGACAATTGGAGACTGATGGGAGGAGGATTATACTAATGAGTTGCGTATGACTACATCGACGCTCTCCACCGCTGAGCATGAACTCCTGGCGTCTCACATGGACGGCAATCACGCCCACTTCCTCTCCGCCCCCTCAGAAGGGATGGCGCATGAAATCATACTTCGTACTCTACACTTCTAATCTATGCTCCAGATTAGTGCGTTGGGACTATATATGTCATTCGATTTGTTCGATGATGTATTCTTCATATCTGCTCTCTCCATAATGCTATTGTGTCATGATATAAAATGATAACAGTGTGCGCTACTGTTGCTCCTCGCGGGAGGGGGCGCGCTGACCTCGCTTCTCGGCTGCTATAGTCGTGATACACTTTCGCCGATGCTCGCGCTGTGCGGCGAGTTCTCTAGCTACAAGACGTGAGAGGTGATAATAGCATGTGGTGTTTTCCCTCAATATTTGCTAGCTTCTGTGACGACTTCTCACGC | |||||||||
gi|88423845|gb|CI609876.1|CI609876 CI609876 Oryza sativa (japonica cultivar-group) callus Oryza sativa Japonica Group cDNA clone TCTTCCCTACTCCTCCCACTC EST sequence (targeted fragment marked with yellow): GAGGGTTTTGGAATTAGAAGCCGCCGTTGCGTGGGAGAGCAAAGTGGAAGCAGCCGAAACCGAAACTAGCCGCCGCCGCCGCCTTCGCCTCCGCCGCGCCGCGCCGCACCACTCGCCCCCAAGGTCCCTAGGGGTTTCCCGCGCGCGGAGTGTGGGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGCGGGGGGGATCTCTCCGGCGGCGAGGATGACCGGCGGCGGCGCGGGGGGAGGAGGAGGAGGAGGGAAGGGGGGCGCGGCGGCGGGCCCCGTCCCGGCGGC | |||||||||
gi|87006615|gb|CI294998.1|CI294998 CI294998 Oryza sativa (japonica cultivar-group) etiolated shoot Oryza sativa Japonica Group c TCTTCCCTACTCCTCCCACTC EST sequence (targeted fragment marked with yellow): AAAAAAATATCCACAGCTTCCCCACACGCCTCACCCACCTCTGGAGATCCGATCATCCATGCATGGCTGCTTCTCCCCTGCGCCTCCTCGCCATCGGCGCCGCTGCTGTACCTTTCATGCGTGGTAGCCGCCACCCGCGAGGACGACGAGCCGACGCCGTGTCTAGGCCGCCGAGATCATCGTCCTTCCTCTGCCAAAGCAGTTCGCCGAGCGAGCCGCCGGGATCGCCGGCCGGTGGCGGCGGCGGCGGCGGCGGCGGAGGAGGAGGAGGAGGAGGAGGGAAGAAGAGCG | |||||||||
gi|86900791|gb|CI302208.1|CI302208 CI302208 Oryza sativa (japonica cultivar-group) callus Oryza sativa Japonica Group cDNA clone TCTTCCCTACTCCTCCCACTC EST sequence (targeted fragment marked with yellow): GATTTCACCCTTAAGCAACCATAACCCCTTCTAGTATAGTTAGCTTAGTGCAGTGACTAACTTAGCTTGAGATGGGAGGGTACCAGGCAGTACTGGATCCAGACAACCAGAAGCCATCCAGCAAAAATCCAGGCTACTTCCTGTCCAAACACACCTGCGCTTGGCTCGCCAGCGGCTTCGTCTTGTTGGCTCTCCTCCACCTCCTCTGCTGCGCCCCGGCCGGCACTCGACCAGCGGCGGCCTTCTCTCCTCTGCTCCAGTACATCAACAACACTTACTCCTTCGTCTCAACAGTGCCGGGAGTAGGGAAGAGCTGCAACTACTCGGATGGGAAATGGGTGTGGGCGCCGGGGCACGTGCTGCGGTACAACGCCACAAGGT | |||||||||
gi|38472573|gb|CF956705.1|CF956705 3839rsiceb_11245.y1 Oryza sativa cv. PA64s leaf cDNA library Oryza sativa Indica Group cDNA 5 TCTTCCCTACTCCTCCCACTC EST sequence (targeted fragment marked with yellow): ACGGCACGAGGGTCTCTGCCACACATGGAGACATAGGACCAGAACACTAGGGACATCATCATAGAGGGAGTTCCGATCTGGTTCTTCCCGTGTGCTTATCACCACTGATCTGCTTGCTCGTGGTATCGATGTCCAGCAAGTCTCCCTTGTCATCAACTACGACCTGCCCACCCAGCCTGAGAACTACCTCCATCGCATATGGTCGTAGTGGTCGGTTTGGCAGGAAGGGAGTTGCCATTAACTTTGTCACCCGCGATGATAAGAGGATAGCTGTTCGACATCCAGAGGTTCTACAATGTGACCATCGAGGAGCTGCCGGCCAACGTCGCTGACCTTCTCTAGATTATGTCTTAGGAAGTAAGGTTCTGGATAAAAGTTTGTATAAGTATTTTAGTTTTAATATAGACCAACTTTCTCGTTTGGGAGGAGTAGGTAAGGACGGGGTCTATATTGAATTGTGGTTAAGGACGGCTTCCATGTTTTTCTCTTTTCCGTATGCAACTATATTTGGAAATTTTTGTAGCTGTTAGGCTGTGCTGCTTCCTGGGCTAGCTGGGAGAGGGAGACACTACTGGAATATTTACTTTCTTTATTAAGCTAAAAAAAAAAAAAAAAAAAACTCGAGGGGGGGCCCG | |||||||||
gi|42478546|gb|CK702601.1|CK702601 BR040014000_PLATE_G09_71_071.ab1 OB Oryza sativa Japonica Group cDNA clone BR040014000_PLATE_ TCTTCCCTACTCCTCCCACTC EST sequence (targeted fragment marked with yellow): TCCTAATAAAGGAGAAAAAAAGTAGAAGAAGGGATATTTTCAGAGAAAACAAGAGAGAAAAGAATGGGGGATGTNGGAAATGTAGTGAGGGAGAGAGAAAATGGGGTGGAGTGGGTTATATCCGGAGAGAGAGGGTAGTAGGTAAAAAGGAAAGATGGGAATTGAAAAGGAATAAAAGTAGAGTGGAGTAAAGAGGGGGAAGAGGGGACATGAGTAGTAGGAACGGGAGTAAGAAAACAAATGAAAGAGAGAGGAATANAGAAAAGAAGNAAAGAGAGAGTAAGTGAGAGGAGATAAGTCAAGGGGAGAGAGGGTGAGAGAGTATAGGGAGTAGAGGGAGGGAGTGTGGAAGTAGGGGAGAAGTGGGAGGTGAGAGAGAGAAGAGTGGGAGAGTAGGGTAGAGGGTGAGGGGGGAGTGTGTGGAGAATGTGGTTGGAGTAGATGATAAAAAATAGAATAAGTGATGAGGAGGTAGGTTGTGAGAGATGGTGTGTGTATGTGAGTGTAGAGTATGGTTGGGAGGTGGTAAGGTTAAGATAGTAGTGTAGTGTGTATGATGGAGTGGAAGTTATGTTATGGGGTTTGTGGTGGTGTTATTGTTGTGTGATGTGTAGTGTAAATCGAGTAAGTAAGAAGAAATAAATAGAATGAGAATGGGATGAGAGGAGGAGGTTGTAGTGGTGTGAGATATGTGAGGAGAT | |||||||||
gi|88355322|gb|CI679027.1|CI679027 CI679027 Oryza sativa (japonica cultivar-group) library (Kikuchi S) Oryza sativa Japonica Gro TCTTCCCTACTCCTCCCACTC EST sequence (targeted fragment marked with yellow): GGATTTCACCCTTAAGCAACCATAACCCCTTCTAGTATAGTTAGCTTAGTGCAGTGACTAACTTAGCTTGAGATGGGAGGGTACCAGGCAGTACTGGATCCAGACAACCAGAAGCCATCCAGCAAAAATCCAGGCTACTTCCTGTCCAAACACACCTGCGCTTGGCTCGCCAGCGGCTTCGTCTTGTTGGCTCTCCTCCACCTCCTCTGCTGCGCCCCGGCCGGCACTCGACCAGCGGCGGCCTTCTCTCCTCTGCTCCAGTACATCAACAACACTTACTCCTTCGTCTCAACAGTGCCGGGAGTAGGGAAGAGCTGCAACTACTCG | |||||||||
gi|117237673|gb|CT855898.1|CT855898 CT855898 Oryza sativa (indica cultivar-group) cv. Guang Lu Ai 4 Oryza sativa Indica Group cD TCTTCCCTACTCCTCCCACTC EST sequence (targeted fragment marked with yellow): ATAACCTGTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGGAAAGGAGGGGAGAGGAGGGGGGGAGGGGGGCCAGGGGGGGGGGTGGGGGAGACGGGGGGTCCTGGGGGGGGGGCTAGGAGGGGGGAGCCGGGGGGGTGGGGAAAGGAAGGGGGGGTAGGGGGAAAACGGGGGGGGGAGGCGATGGGACGGCGGGGGGAGGGCGGAAGGGTAGGAGGTGGGGGGAGTAGGGAAGAGGGCGGGGGGGAGGGGGGGGGAAGGGAGGGGGCAAGAGGGGAGGGGGGGGGGGAGGGGGGGGGGGGGGGGGGGGGGGAGGGAAGGGGGAGGGGGAGACGGGGAGGGGGCCCGCTGCTTGGGCTGGGGCCTTGGGGCCGGCGCCTGGTGGTTACGTCCGTCGCGGTCCGGGGGGGAGGGGGGGGTTTGGGGATGGGGTTCTAGGTGGGGGGTTCGGTTTAGGGGACCAAGGGAAGGTGATAGGGGGAGTAGGGGGAGGGAGAGGGGGATAGGGGGGGGGGCGGGGGGGGGGGTCTTGGGCGTGGGAGATGGGGATGGTGGTTTGGGCGTGGGGGAACCGGGAAGTAAGAAGGGAAAACGGGAACCAAGGGGAAGGGACAGTGAAGAGAGGGATGGGGGAATAGTGGGGATGAGGGGAGATTGGTGGAAGATTTGGGCCAATGGGAATAAAAGAGGAGCGGAATAAAGTAAAAATTGTAAGAGGAGTTTGGGAGGTGGGGGGGGGGGGTGAGAAGGGTAGGGGGGGACCGAATGGGGAATTGGGTGGAGTTACCTGCTGATTTGGCAAATTTGTAAAGGGAAAATGAAGAAAGGAAACCGGAAAAGAGGAAAAAAGGAAAAGGGAAAGGGGTAAAAAGATGAGGGATAACGGAGTGGCCTGGGTTTTCTTAATTCCGTTGTGCTGTGGCTTGTTGGGTTTTGGGGGCAGGGTAGCGTAAAGGGAGAAGAAAAGGAAAAAGGGGGGGGGAAGGAGGGGGGGGAGGGGGGGGTAGGGGAATAGGGGCGGAATGGGAAAGGGAATAAAAGGGTGAGAAAAATTTGAGAATTTTTAGGGTTAAGAAGGGTTTGGGGGGAGGGATTGGGGGTTAGGGGGGGGGGGGGGGGGGGGGGGGGCGGCGGTTACGCCGCCCGGGGAAGGGCACGCTGTCGCTCTGCTTCTTGTTTCTGATAAAATGATTGGGGGGGGAGAAAAAAAAGAAAAAAAGGAGAAAGGGAAGAGAGGAGGGGAGGGGGGGGGAGGAGGGAGAGGGAAAGGAAGGAGTGGG | |||||||||
gi|66931250|gb|CX118098.1|CX118098 EI113A16 A normalized whole-life-cycle cDNA library of rice Oryza sativa Indica Group cDNA cl TCTTCCCTACTCCTCCCACTC EST sequence (targeted fragment marked with yellow): AAAAAAAAAAGGAGAGGAGGGGTTGGGATTAAAGACACCCTCCCACCCCCAGGGAGGGGGCGGAGTGGGGAGGACCCACCCCGAGGCGGGGCGGGGAAAAAAAAACGGGTTTTTCTTCTCTCCCCCCCGTGTGGGTGGTGGTGTGAGTGGAGAAAACCCTCTTTTTTGGAAACAAACGCGCGCCACACAAACACTCGGGCCCCCGCTGTGGGGGGGAGANAATCTATTTTTATACCCCCACGAGAGGGTGGTGGCCACCCAAAAAAAAAAAAACGCCACGCCACCACGACCCGCCGCAAAAAAAACACG | |||||||||
gi|218496254|gb|FG963413.1|FG963413 MA_LYP9_02197 Mature embryo cDNA Library of LYP9 Oryza sativa Indica Group cDNA 5', mRNA seq TCTTCCCTACTCCTCCCACTC EST sequence (targeted fragment marked with yellow): CGAGCTCANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTCAACGAGGCCGCCGGAGGAGGAGGAGGAGGGAAGAAAGTGCGGCGGGAGCCGTCGCTGGGGCAGGACGAGCTGAACCGGAGGGTGGATGCGTTCATCAACAAGTTCAACATGGAGATGCGGCTGCAGCGGCAGGAGTCGCTCAAGCACTACAACGAAATGATCAGCAGAGGCAGCGTCTACTGACGATGCAGAGCAGCAATAGCAGCAAGCAAGAGCTTGCT | |||||||||
gi|88445514|gb|CI587127.1|CI587127 CI587127 Oryza sativa (japonica cultivar-group) flower Oryza sativa Japonica Group cDNA clone TCTTCCCTACTCCTCCCACTC EST sequence (targeted fragment marked with yellow): GACCCCCAAAAAGTGGCAAACTATCTCCCCCCCTTTCTCCTCCTCCGTAGCTTCCTTCGCCTTCCATTCCATGGCCACCACAGACACTGCCCCCCGCCTCGCGCTCCTCCTCCGGCCCGCCATGGCCTGACCTGACCTCCCCCAAAACCTTGGGGCCTATGAATCGATCGGGAGAGGGGGTTCTCCTTCCTTTCCTCGACCTGCTGCTGGTGGGTTTGGTGGTTTCTTGCGGGGGGAGGCGGCGATGAGGGGAGGAGGAGGAGGAGGGAAGGAGGTGGAGGAGAGGGGGAATGTGATGGGCCCGCTGTTCCCGCGGCTCCACGTCAACGACGCCGCCAATGGCGGCGGCCCGCGGGCGCCGCCCAGGAACAAGATGGTGCTCTACGAGCAGTTCACCTGTGCTGTTCCATTGTTTTAGTTGTGTGTGATGTGT | |||||||||
gi|117216296|gb|CT857843.1|CT857843 CT857843 Oryza sativa (indica cultivar-group) cv. Guang Lu Ai 4 Oryza sativa Indica Group cD TCTTCCCTACTCCTCCCACTC EST sequence (targeted fragment marked with yellow): ACACCAAGCCCATATGATGTAGTTCTAGTAGTTACAGCCAAGAACATGGCAAGAAACTATGGAGATGAAGATGAAGATGATATGCTACAACTCGACGGAGACGTAGGTGGCGGAGTAGTCTGGCATCCGGTGCAGGCTCCGGAGCACGCTCTCGGCGACCTGCTTCGTCGCGGCGTCGCCCTTGTGGAACGCGCTCACCAGCGCGCTCGGCAGCGCGCGGTCCGCCGTCACGTCGCGCACGCACCGCTCGCCGCCGTGCGCCAGGAACCTCTCCACGGCCCAGAAGCAGCGCCGCGACACCGCGCCGGCGGTGTCGCCGCCGACGTCACGGTGCTGCCGCAGCGCGCGCAGGACGTGCCGCGCGGCGTCGTGCTCGGCGAGCACGGCCACGCCGCGTTCCACGTCGACGGCGTCGTCCATGAGCGTGCAGAGCGCGCCCAGCACGGCGTCGACCACGCGGCCGTTCTCGTTGCTCTCGAAGGACGCCGACGAGGGCCTCCACCGCGCCCGCCTCCGCCCAGGCAAAACGTGGTGGCCGGGGGAAGCACACCGCCGCGGTGCACCGGGGCCAAAGGGCCGTCCCCTGGCCCCCGGCGGCCGGGTGGGCGGCTTTCCGGTTTGGTTGTGCGGGGACCCCGCCCCGGGGGGTGCGCCGTCGCCCAAGGGCCCGGAAGGGGAATTTTTCTTTCTTGCTTGGGGGCCCCGCTGGCCTCCTCCTGGGAGGGCGGCGGGCGGAAAAGGTTGCCCCCGACGGGGGGGCGAAAAGGTTTTCTAAAGGCGCGAAACCGGAGCGAGACAGCCCGGTGCGGACACAGTCCGGTTCACCCAGTGTGAGCGCGCGGAGGGGGAAAATCGGGGGGGACCCCCGCGAGGTTACAATGAGGTGTGCGCGGGGGAGGCGGCGGGAAACAAGAGGTGGGGGAGGGTCACCAAAGAGCCATTTTCGCATACGGGTGGACGGGTGGAGAGTGGGGAGTGGGGAAGAAAGGGAGGGGGGAAAGTGGGAGGGGGGGATGTTTGCGGGTGGGGCGCGCGCGTGTCTTGGGCGGCCATGGAGGGGTCGCGTTGGGGCTGTGAGGTGTGTCTGTGTATAGGGTTTCAGGCCGTCGGCGGGATCAGCTGGTCGCGGCTTACGCAGGGGTAGGCGTCTCGCGCCGGGGTGGCGTCTCGAGCCCGCGGCAGACGTCGAGTCGAGGCTGCACGGTGATGTGGTGGAGACGTATGATTGCATGTGAGGGGAGGGCTGGGTGGGATGCGGGCCAGATGTACGGGCGCACCGGGCGCTAGCTGGAAAGAGCGAGGAGATAATGGTAGATTATATCGAGAGTGCGCGTAGTGATCTGGTGG | |||||||||
gi|88362931|gb|CI614287.1|CI614287 CI614287 Oryza sativa (japonica cultivar-group) callus Oryza sativa Japonica Group cDNA clone TCTTCCCTACTCCTCCCACTC EST sequence (targeted fragment marked with yellow): GTTGGAAGTGGTTTTTGGAATTAGAAGCCTGCCGTTGCGTTGGTGAGAGCAAAGTTGGAATGCAGCTGAAACCGAAACTAGCCGCCGCCGCTGCCTTCGCCTCTGCTGCGCCGCGCCGCACCACTCGCCCCCAATGTCCCTAGGGGTTTCCCGCGCGGGAGTGTTGGGGAGGAGGAGGAGGAGGAGGAGAGGAGGAGGCGGGGGGGATCTCTCCGTCGGCGAGGATGACCGGCGGCGGCGCGGGGGGAGGAGGAGGAGGAGGGAAGGGGGGCGCGGCGGCGGCCCCGTCCCGGCGGCGTCCACGAACCTGGTGCACAGCCTGAAGGACATCGTGAACCGCCCGGAGGCGTACATCTACGCGGCGCTGCGCGATTGCGGCATGGACACCTACGATGTGGTCAGGCGCTTCCTGTGTGATGATAG | |||||||||
gi|88717586|gb|CI741096.1|CI741096 CI741096 Oryza sativa (japonica cultivar-group) 1 day after pollination pistil Oryza sativa J TCTTCCCTACTCCTCCCACTC EST sequence (targeted fragment marked with yellow): TTCGCCTTCCATTCCATGGCCACCACAGACACCGCCCCCCGCCTCGCGCTCCTCCTCCGCCCCGCCATGGCCTGACCTGACCTCCCCCACAACCTGCGGCCTACGAATCGATCGGGAGAGGGGGTTCTCCTTCCTTTCCTCGACCTGCTGCTGGTGGGTTGGTGGTTTCTGCGGGGGGAGGCGGCGATGAGGGGAGGAGGAGGAGGAGGGAAGGAGGTGGAGGAGAGGGGGAAGGTGATGGGCCCCGCTGTCCCCGCGGCCCCACGTCAACCGACGCCGCCAAGGGCGGCGGCCCGCGGGCGCCGCCCAGGAACAAGATGGCGCTCTACGAGCAGTTCATCGTGCTGTTCTA | |||||||||
gi|66929661|gb|CX116509.1|CX116509 EI104N24 A normalized whole-life-cycle cDNA library of rice Oryza sativa Indica Group cDNA cl TCTTCCCTACTCCTCCCACTC EST sequence (targeted fragment marked with yellow): GTGTCTGAGTCGGCCGGACTCCGGGTTTACCACGCGTCGCGGACGCGTGGCGGACGCGTGGAAGACTGCAAAGAAAAGGCCTGTGTCAAGGAGAGGGTAGTAGCACCTTGCTCTCCTTTGCCTTCAGAGAAACCGGAAGCAATGGCGTCTGCTACTCTCCTCAAGTCATCTTTCCTTCCCAAGAAGTCTGAATGGGGTGCCACCCGCCAGGCTGCCGCCCCCAAGCCGGTGACCGTCTCCATGGTTGTCCGCGCTGGTGCCTACGACGATGAGCTTGTCAAGACCGCGAAAACCATTGCATCACCAGGAAGGGGTATCCTTGCCATGGATGAGTCGAACGCGACCTGCGGTAAGAGGCTTGCGTCAATTGGCCTTGAGAACACCGAGGCCAACCGCCAGGCTTACCGGACCCTCCTTGTCACCGCACCGGGCTTGGGACAGTACATCTCCGGTGCTATCCTCTTCGAGGAGACTCTGTAACCAGTCAACTGTAGATGGCAAGAAGATTGTCGACATGCTCACCGAGCAGAAAATCGTTCCAGGTATCAAGGTCGACAAGGGTCTTGTGCCCCTTGCTGGCTCAACAACGAGTCATTGTGCACACGGTCTCGACGGCCCTTGCATCAGCGAGGCGGATTACTACCGCAGGGGCTCGCTTGACAAGTGAGCCTGTTGTAGATCAAAGGCCATCTAATACCGAGAAGAGTGACTGAGGCTGACAGTACAGCGAATCCCGGACAGGCTGTCCATGCCGCTGAACATCTGAGTACACGGTAGGACTCCGGCACGGGGGCACAGAGGCGCAGATACGAGACCCCAGAGAGCTAGGGGGACAACTGACAGGGAGCGCGGATGGGGGGCAGAAGGGACGGACGAGGCCGCCAGGAGCGCGAGAAAACAACAGCGCGGAGCGGGAAGAGAAGGGAAGAGAGGTGATCCGCCAGGGGGTGGAAACGAGGATGCGGGGAAGCGAGCATGGGAGGAGAAGGAGGGAATCAGGACGACAGGAAGACAAGATAGAGAGAGGGGACAGAAAGACGT | |||||||||
gi|88367293|gb|CI564057.1|CI564057 CI564057 Oryza sativa (japonica cultivar-group) shoot Oryza sativa Japonica Group cDNA clone TCTTCCCTACTCCTCCCACTC EST sequence (targeted fragment marked with yellow): GCTTCGCCTTCCATTCCATGGCCACCACAGACACCGCCCCCCGCCTCGCGCTCCTCCTCCGCCCCGCCATGGCCTGACCTGACCTCCCCCACAACCTGCGGCCTACGAATCGATCGGGAGAGGGGGTTCTCCTTCCTTTCCTCGACCTGCTGCTGGTGGGTTGGTGGTTTCTGCGGGGGGAGGCGGCGATGAGGGGAGGAGGAGGAGGAGGGAAGGAGGTGGAGGAGAGGGGGAAGGTGATGGGCNCGNT | |||||||||
gi|88444897|gb|CI696336.1|CI696336 CI696336 Oryza sativa (japonica cultivar-group) 3rd week immature panicle Oryza sativa Japoni TCTTCCCTACTCCTCCCACTC EST sequence (targeted fragment marked with yellow): GATCTTGTTGGAAAAAAATATCCACAGCTTCCCCACACGCCTCACCCACCTCTGGAGATCCGATCATCCATGCATGGCTGCTTCTCCCCTGCGCCTCCTCGCCATCGGCGCCGCTGCTGTACCTTTCATGCGTGGTAGCCGCCACCCGCGAGGACGACGAGCCGACGCCGTGTCTAGGCCGCCGAGATCATCGTCCTTCCTCTGCCAAAGCAGTTCGCCGAGCGAGCCGCCGGGATCGCCGGCCGGTGGCGGCGGCGGCGGCGGCGGCGGAGGAGGAGGAGGAGGAGGAGGGAAGAACAGCGCGTGGTGGGCCGCCGCCATGGCCGAAAGGGTGTTCGGCGACGCGGCGAAGGCCGGGAGGGCGGTGCGGGAGAGCCTGAGCCCCAAGCAGAA | |||||||||