| mature miRNA: TGATGGACCTTCGGTGTACTT species: Oryza sativa database: miRNEST The numbers on the right side of the alignments show a score calculated for them. When calculating the score, a mismatch is given a score of 1, bulge: 2, and wobble: 0.5. |
| Predicted miRNA targets | |||||||||
gi|55409207|gb|CV721583.1|CV721583 YBH--04-J18.b1 Rice before heading yeast two hybrid lambda phage cDNA library (YBH) Oryza sat TGATGGACCTTCGGTGTACTT EST sequence (targeted fragment marked with yellow): GGCACGAGGCGGCACGAGGCGAGTTTTTTTTTTTTTTTTTTGAGTATTTTTATAGGCCTTTTTAATTAAAAGGAAAAAGTACACCGAAGGTCCCTCAACTTGTCATCGAGTTACAAAATCGTCCCTCAACCACAAAACCAGATATCCGGTGTCTCTCAACTTATAAAACTAGTCACAACAGGTCCTTCGATGATTTTGACCCTAGTTTTATCTTACGTAGCGACTGAGTCAGCGTGGGACCCACATGTGCATGTGGCCACGTCGGCCTCCTCTCTCTTTCCCTAATTCTCTCCCTTCC | |||||||||
gi|86501877|gb|CI144510.1|CI144510 CI144510 Oryza sativa (japonica cultivar-group) mixed shoot (Normalized Library) Oryza sativa TGATGGACCTTCGGTGTACTT EST sequence (targeted fragment marked with yellow): GTCGACAAATGTATAGGTGGTCCCANATGGGAAAATACACGCAGTGTTTCTTACATGAGTTGCCAACCATTCCAGCCCAGAATTTAAGTTAGTCGGGCCGCTCCAAATACACAATAGACGGGCCTGGTCAGACAAAGCCTATCATTCCAGCCCAAAAAGGAAAAAGTACACCGAAGGTCCCTCAACTTGTCATCCAGTTACAAAATCGTCCCCCAACCGCAAAAACCGTTCACAACTTGCAAAAACCGTTCAATTTAGGTTCTTTGGTGGTTTTGACCCCGNGTTTTATCCTACGTGTCAGCTGAGTCAACGTGAGACCCACGTGGGCCCCACATGTTAGCGTGGCCACATCATCATCCTCTCTTTCCCCTCCCCTCTCTCTCGCACGCTTTTCTCCTCTCTCCACGCTGCGCCGCGCCTCCCTCCCGGTGCTCGCGCTCCTCCTCCACTTCCGCGTCCTAGCCGCCGCCGCGGGTCCCACTTCTCCCCCAGCGATTTCCCGCCTCGCGGGCCGCCTCCGCCTCTCCC | |||||||||
gi|86893374|gb|CI313456.1|CI313456 CI313456 Oryza sativa (japonica cultivar-group) shoot Oryza sativa Japonica Group cDNA clone TGATGGACCTTCGGTGTACTT EST sequence (targeted fragment marked with yellow): GCTTCACCCAGGAAAAAGTACACCAAAGGTCCCTCAACTTATAGTCGAGTTACAAAATTGTCCCCGAACCACAATACCAGATATATGACATCCTTCAATCTACAAAACCGTTCACTTCAGATCCCTCGGTAGTTTTGACCCTGGTTTTGTCTGATGTGGCGGCTGAGTTGGCGTGGGACCCACGTGGGCCCCACATGTCAGGACGCCACATCATCATTCTCGTCTTATTTCTTTTTTTTCTCTTTTCTTTTTATTTCTTCTCTTCTCCTCTCTTCTCGACAGAGCCGGCGGCAGATGGGGAGAGGCGGCCGTCGAGCCCGGCCCCAGACGAGCTCTGCCGCCACCACCGCTCGCTGGGCTCGATCAAGGGAGGGGCCGGTGAGCCCATTTGGAAGTAGAGCAGCAGCAGCAGCAGGACGGTGAGAGGTGCTCCGAAGGACTGCACCATCGTCGCCAGCCAAAGCTGTCGCCGCCCTGA | |||||||||
gi|88487261|gb|CI424532.1|CI424532 CI424532 Oryza sativa (japonica cultivar-group) 14 days after transferring callus Oryza sativ TGATGGACCTTCGGTGTACTT EST sequence (targeted fragment marked with yellow): ACTGATACTCAATACTCTACTCCTAACAAGTTTAGGAACGAGGATATGGGTCAGGCCGAGACGGCCCACAATAATATTACTCGATGGGCTTGTACTATCTAATAGGAAAAAGTACACCAAGGTCCCTCAACTTGTCATCGAGTTACAAAATCATCCTCCAAACACAAAACCAGATATCCGGCATCCCCCAACTAATCAAAACCAGTCACAATAGATTCTTCAGGGGTTTTGACCCTAATTTTATCTTACGTGGCGGCTGAGTCAGCTTGGGACCCAANGTAGACCANACATGTAAGGATACCACGTC | |||||||||
gi|88555738|gb|CI486016.1|CI486016 CI486016 Oryza sativa (japonica cultivar-group) 10 days after pollination pistil Oryza sativa TGATGGACCTTCGGTGTACTT EST sequence (targeted fragment marked with yellow): CGGGGAAAAGTACACCGAAGGTCCCTCAACTTGTCATCGAGTTACAAAATCATCCCCCAACCACGAAATCAGATATGAAACATCCCTTATCTTACAAAACCGTTCACTTTAGGTCACTCGGTGGTTTTTACCCCGGTTTTATTCCACGTGGGCGGCTGAGTCAGCGTGGGACCCACGTGGGCCCCACATGTCAGGATGTCACGTCATCCCATCCTCTCCCTTCCTCCTCTCTCTCACTTCTCTCCTCTCGGGTAGGCTAGCCAGNGGGTGGGGAGGAGGTCGCCGACAACAGGCGCGAGGACGAAAGGGTCGGCGGNGAACAGGTTGACGGTGTTGGATTCGGTGACGGCGGCGGCGGNGACCTTGACGAGGTCGGAGATGGACATGACGGCACACGTATACC | |||||||||
gi|88510636|gb|CI438142.1|CI438142 CI438142 Oryza sativa (japonica cultivar-group) callus UVB iradiated callus, immid after trea TGATGGACCTTCGGTGTACTT EST sequence (targeted fragment marked with yellow): AGTTTTGTGATATGTTTATAACACAAAGGAACAGGTACACCCAAGGTCCCTCACCTTGTCAGTGAGATAAAAAAACGTCATCGAACCGCAAAAACAGATATATAGGGTCCCTTAACTATACAAAACCCGGTCAACCGAGATTCTTCGGTGGTCTTGACCCCGGCTTGGGTNTATGTGACGGCTGAG | |||||||||
gi|218481800|gb|FG945731.1|FG945731 MA_93-11_02626 Mature embryo cDNA Library of 93-11 Oryza sativa Indica Group cDNA 5', mRNA s TGATGGACCTTCGGTGTACTT EST sequence (targeted fragment marked with yellow): CGAGCCACGCGGGGCGGCGCCTAAACTAGTGGATCCCCGGGCTGCAGGATTGTTTCTCTGTTCCACTCTCTGTTTGATTTTTTGGCTTTCAAAAATGATATTCAGTTCTGGAATAAGAACAAGTCCATGGAAGGTCTATCAGCAAAATCCGTGGTTCTGAACTTTGTATGCACAGCTGATTATTTTCCTACTACCT | |||||||||
gi|88201264|gb|CI201619.1|CI201619 CI201619 Oryza sativa (japonica cultivar-group) Panicles mixture of one, two, three weeks aft TGATGGACCTTCGGTGTACTT EST sequence (targeted fragment marked with yellow): TTTTTTAGAGGAAAAAGTACACCGAAGGTCCCTCAACTTGTCATCGAATTACAAAATTGTCCTCCAACCACAAAACCAGATACAACGTATCTCCCAACTTATAAAACCGTGCAAACTAGGTCCCTCGGCGGTTTTGAGCCTGGTTTTGTCCGACGTGGCGGCTGACTCAGCGTGAGACCCACATGTAAGGATGCCACGTCAGCACCCTCTCTCTTCCTTTTCCTCTCCCTCCCTTCTCTCTCTCTCGCTTGTCTCCTCTGCAAGTAGCAAGCCGGCCGGCGGGCGTGGAGAGGTCGCCCGGGGCGAGGCGGGAGAGGAAGCGGCGGTGGGCGACACGGCGGCGACGGCGGAGGCTACGACGCCGGAGGGGAGGCCACCGCGGCGGCGACGGCTGAGGCTGCGACGCTGGAGGGGAGGCCGCCGCGCCGAGGTTGGATTCTCCCTTCCGCCGCGCCGACAGGAGGAGCCGGCGGCCGGCGATGCAGGGGCGGCGGTAGTGGCGAGACGGGAGAACGAGAGGGCATCGGCGGCGGGAGCACTGCATGGGGAGAGCGAGGACGATGGGGCACCTCGGC | |||||||||
gi|88483214|gb|CI420485.1|CI420485 CI420485 Oryza sativa (japonica cultivar-group) callus UVB iradiated callus, immid after trea TGATGGACCTTCGGTGTACTT EST sequence (targeted fragment marked with yellow): GGAAAAAGTACACCAAAGGTCCCTCAACTTGTCATCGAGGTACAGAATTATCCCTCAGCCGTAAAACCAGACGTAATATCTCTCAACTTACAAAACCGTTCACTTTTTGACCCCGGTTTTATCCAACGTGGTGGTTGAGTTAGCGTGGAATACACGTAGACCCCATATGCTAGGTGTCCACGTCAGCCCCCCTCTCTCTCACTCATCTTTTCTCCTCTCTGCAAGGCGACGCACGGGTGGGGAGGTCACCGGGGCGAGGCGGGAGAGGAGATCCGGCAGTCGGCGATGCGGCGGTGGCGGCTGCGACACTGGAAAAGGGAGGCAGCTCATGGCGGCGGCCGACGACGATGCGGGAAAAGGGAGAGCGTCACCGCGCGTGCGACCTCGGGGTCGGACCATCAAAAAGGCCCCGGAGGTGGGGG | |||||||||
gi|33680323|gb|CF308562.1|CF308562 ABF--02-G23.g1 ABF3-overexpressing transgenic rice plasmid cDNA library (ABF) Oryza sativa Ja TGATGGACCTTCGGTGTACTT EST sequence (targeted fragment marked with yellow): TTTTTTTTTTTTTTTGGCAGGACAAATATTGATCGCCATCAAGGCACCAAACCATGCATTCACTTTGATGCACAGATGCATGTACACATCAGAGCAATACATCCGTTCCTAGCTCTCCTTATGTACAACGAAAGTCCATCAACATATAGGGAGAAATAACCTGTTTTCTTTTAGGCTTTTTCCCTTCTCCATTTTCTTGGCTTATGCTTGGAATGACTCACGAAAAGTTCTAGGCAGAAGGAAGGATGTCGAGGGCCACTTCCTTCAGTGATGGCATCTCTTCTTGTTCATGCAAGCAGAAGAAACTGCCACCTATGTTTCTCAGAACCTTCCAAGGCCCAGGATAACACCTGAAAAGTGTTCCTCCTTTGAGTCCCTTAAAATTGTGAATATAATAAACTGTCTCCAGCTTTGGAAGAAATGTTTTGGAAAGTTCCGCTAGCTTTGGGTAGAAGAAAGGAGGGTAGTACCCACTTCTTATTCGATCTAGTTCCCCGTTGAATATTATCAGTTTTCGGTCTGTGCTAACAATTGCTTCCTTGTAAAGCTCTTCAACCACAAGCATTTCATTGACATTGAAATAGGGATAAGCCACGAGGAATATCTCGTCTTCTGGACGCACACGGTCTGACATTTTGACCTTTGTTGTAAACCAAAATCTTC | |||||||||
gi|86592506|gb|CI253187.1|CI253187 CI253187 Oryza sativa (japonica cultivar-group) Panicles mixture of one, two, three weeks aft TGATGGACCTTCGGTGTACTT EST sequence (targeted fragment marked with yellow): AAATCAAATTTTAGTGCTTACAATTAGGCCTTCACTATAAGACAGCCCATAAGCCCAACTTGGGTGTACCCGTTAGATCACGTACATCTCGCTCGGTGGAAACAAACTTGCACGGCCGAGAAAATGGTTGGTAGGCCCAAACGCTCATCAACAGCTCGAGAGCAATCTCATAAAGGAAAAAGTACACTGAAGGTCCCTCAACTTGTCATCGAGTTACAAAATGTCCCCCAACTACAAAACCAGATATCCGGCGTCCCTCAAGTAATCAAAACCGATCACAATAGGTCCTTCGGTGGTTTTAGCCCCGGGTTTTATCCTACATGGCGGCTGAGTCAGCGTGGGACCCACGTGGACCCCACATGTAGGATGCCACGTCAATCTCTATCCTTTACTCATCTGTCTCTCTCTCGTCCTCTCCTCATCTGATGCCGCGAGGAGGGCGGCGCCGTGACGGCGGCAGGCGGCGGCGGTGGCAGCATGGCGGCGGAGAAGCGGCGCGTGGGCGGCTGGGGAGCAGACGAGGGAAGAGGTGGTGCGCGTCCTCCTCATTGAACCCGTCGTCGTCGTCTTCAGCAGCGTTGACAGCCGCGGCTGTGGGAAGCAGATAGGGAAGTGGGAGCGGCGACGGCGGCGGGAGTGGAGCTCGCCG | |||||||||
gi|88514904|gb|CI442558.1|CI442558 CI442558 Oryza sativa (japonica cultivar-group) leaf of seedling 10mM H2O2 (10min), 24hr afte TGATGGACCTTCGGTGTACTT EST sequence (targeted fragment marked with yellow): GGAGGCAACCTTTTTCAATGAGACACCTATAGCACAAGGGAAAAGTACACGCAAGGTCCCTCAACTTGTCATCGAGATACAAAATCGTCACTAAACCGCAAAACCGGACATCCGGCATCCCCCAACTTACAAAACCGGTCATAAAAGGTCCCTCGGCGGTTTTCACCCCGGTTTTGTCCCACGTGGTGGCTGACTCAGCGTGGGACCCACGTGGGCCCCACATGTCATGGAGACCANGTCAGCCTCCTCTCTCTCTTCTCTTTCCCTTCCTCTCCCTTCCTCATCTCCTCTCTCTCACTTATCTGCAAAGCTAGCCGGGGCGAGCAGGAGAGGAGGAGGGCGNGCACACGACGGCGACAGCGGGGGCGGCGGCCGTACTGGGGAAGCACGGCGGAGGCGCGGGGACCCCGGAACCTGACGACGA | |||||||||
gi|87029130|gb|CI276398.1|CI276398 CI276398 Oryza sativa (japonica cultivar-group) mixed callus (Normalized Library) Oryza sativ TGATGGACCTTCGGTGTACTT EST sequence (targeted fragment marked with yellow): TTTTTTTTTTTTTTTTTTTTTATCATTGGGCCACACATTTATGAGAGGAAAAAGTACACCGAAGGTCCCTCAACTTGTCATCGAATTACAAAATTGTCCTCCAACCACAAAACCAGATACAACGTATCTCCCAACTTATAAAACCGTGCAAACTAGGTCCCTCGGCGGTTTTGAGCCTGGTTTTGTCCGACGTGGCGGCTGACTCAGCGTGAGACCCACATGTAAGGATGCCACGTCAGCACCCTCTCTCTTCCTTTTCCTCTCCCTCCCTTCTCTCTCTCTCGCTTGTCTCCTCTGCAAGTAGCAAGCCGGCCGGCGGGCGTGGAGAGGTCGCCCGGGGCGAGGCGGGAGAGGAAGCGGCGGTGGGCGACACGGCGGCGACGGCGGAGGCTACGACGCCGGAGGGGAGGCCACCGCGGCGGCGACGGCTGAGGCTGCGACGCTGGAGGGGAGGCCGCCGCGCCGAGGTTGGATTCTCCCTTCCGACGCGCCGACAGGAGGAGCCGGCGGCCGGCGATGCAGGGGCGGCGGTAGTGGCGAAACGGGAGAAGGAGAGGGCATCGGCGGCGGGAGCACTGCATGGGGAGAGCGAGGAC | |||||||||
gi|88286228|gb|CI522528.1|CI522528 CI522528 Oryza sativa (japonica cultivar-group) library (Kikuchi S) Oryza sativa Japonica Gro TGATGGACCTTCGGTGTACTT EST sequence (targeted fragment marked with yellow): CACAAAATCAGTATAGGATTTAAAATAGATTTACTAGACAGATCCATAGCTCAAGCACTAATTGCCACAGCCTAGAACAGGCCGAAGAGGGCCGATAGAAGGGAAAAGTACACCGAAGGTCCCTCGACTTGTCATCGAGTTACAAAATCATCCCCTAACCGCAAAACCAGATATCTGATGTCCCTTAATTTACAAAACCGTTTACTTTAGGTGCATCGGTGGTTTTGACCCTGGTTTTGTCCTACGTGGCGGCTGAGTCAGCGTGGGACCCACATGGGCCCCACATATCAGCATGCCACGTCAATGGCCGCTCCTCCCTTCCTCCTCTCTGTCTCTCTCTCCCTCTCTCANTTCTCCTCTCGGGCAGGCTACCCAGCGGGTGGGGATGAGGTCGCCGACAACGGACGTGAGGACGAGGGGGTCGGCGGCGACA | |||||||||
gi|88303897|gb|CI512971.1|CI512971 CI512971 Oryza sativa (japonica cultivar-group) 2 nuclei stage pistil Oryza sativa Japonica G TGATGGACCTTCGGTGTACTT EST sequence (targeted fragment marked with yellow): CTTTTTTTTTTTTAAGTACACTGAAGGTCCCTCAATTTATCATCAAGTTACAGAATCATCCCCCAACCACAAAACCGGATACAACACATCCTCCAACTTATAAAACCAGTGCAAACTAGGTCCCTCGGCGGTTTTAAGCCTGGTTTTATATAACGTGGCGGCTAAATCAGCGTGAGACCCACATATCAGGATGCCAAGTCAGCAAGCGCCTCTCCGGCTCTCCCTTCCTCTCCTTTCCTCCTCCCCCTCTCTCTCTCTCTCTCTCTCTCTCTCGCCCTTCTCTGATTGGGCAGGCAGGCCGANGGTGGGCAGGAGGTCGCTGGGGTGAGGAGGTCCGACGGNCGGCCGGGGATGCGGCGGNGGNGATGTGGTGGCGGACACCCCTNCANACCGCATCTGA | |||||||||
gi|88479992|gb|CI417263.1|CI417263 CI417263 Oryza sativa (japonica cultivar-group) callus suspension-cultured cells treated with TGATGGACCTTCGGTGTACTT EST sequence (targeted fragment marked with yellow): GGCTCAAGACTTTTGGTGACTATTGAGCTGTTTCTTGGAAAAAGTACACCGAAGGTCCCTCAACTTGTCATCAGGTTACAAAATCGTCCCTCAACCGCAATACCAGATATATGACATCCTTTAACTTACAAAACCATTCACTTTAGATCCCTCGATGGTTCTGACATCATCCTGTCTTATTTCTTCTCTTCTTTTTCTCTTTTCTTTTATTTCTTCTTTTCTCCTCTCTTCTCGATGCAGCCGGCGGCAGATGGGGAGAGGTGGCGTGGAGCGCATCCCAGTCCAGGCCTCCGAGCTGTTGTTCGACGTCGACGAGTCGGCGCGGCGGAGCGCGCCACCGGGGCGGTCGCCAGGGTCCGGGCGCTTGCGAGGGACAGCGAGCGGAACCGGCGATGCTTC | |||||||||
gi|86592412|gb|CI251066.1|CI251066 CI251066 Oryza sativa (japonica cultivar-group) Shoot and root of germinating seeds Oryza sat TGATGGACCTTCGGTGTACTT EST sequence (targeted fragment marked with yellow): TTTTAATATATAGGCAGTCCCGGTCCGTTCGTGTTCCACGCACTGTGGGCACTGTGAATGTGTGACTAAATGGGCCGAGCCCAACTACTATAGCTAAGTCGCGCTGTCCATCTCACCATCTCCCGGAAGGCAAAAAGTACACCGAAGGTCCCTCAACTTGTCACCGAGTTACAAAATCGTCCCCCAACCATAAAACCGATACAACACATCCCCTAACTTGTTTTGACCCGGTTTTGTCTCACGTGACGGCTGAGTCAGCGTGAGACCCACGTGGACCCCACATGGCAGGGTGTCCCTGTCAGCTCCTGCTCTCTTTCCTCTCTTCTCTTTTTTTTTTTTCTCTTCTCCTTTCCTCCCTCTCGCTCTCTGCTCTCGCACAGGCGACGGCGCGCGCGGCCGGCGACGGCGGCTCCCGGGTGGCGGCGCGCGGGTTCAGGGCGGCGCGCGGCTACGGCCATCATCACATCTCGACGACGCCGCCATCAGTCGCTGCCATCGGCGATGGCGGCACGCTGCAGTGGGCCATCCAAAACTTCATCCGCGCCAGTGACTACCTCACGCTGTTGCACGTCTGCCCGCCAGCGAGGTTGCGCAGCCTACGCCTCGGC | |||||||||
gi|86502278|gb|CI144911.1|CI144911 CI144911 Oryza sativa (japonica cultivar-group) mixed shoot (Normalized Library) Oryza sativa TGATGGACCTTCGGTGTACTT EST sequence (targeted fragment marked with yellow): ACAAACTTTGTCAAGTAGGGTAAAACCATTTTAGGTCAGTTAGCTAGACCTTGTGGGAAAGAAGTACACCTAAGGTCCCTCAACTTGTCGGCGAGTTACAAAATCGTCCGTAAACCGATATATAACATATCTCAACTTACAAAACCGTTTGCTTTAGGTCCTTCGGTGATTTTGATCCCGGTTTGGTCTGATATGGCGGCTGAGTCAGAGTGGGCCTCACATGTCAGTATGCCACGTCATCACCTCCTCTCTCTCTCTCTCTCACTTTTCTCCTCTGTTGGCTGGCCGACGTGTCGGAGGAGGTCGTTGGGCGAAGACGGGCGACGGCTGGGGAAGACCGGAGGCGCACGGCCGGCCGACGGACGCTCGTCGCCGTCATCGCCGTGGCCGCTGGACGCCGGCGCCGACGTGGAAGCGGTCCCCGAGCTCACTGGCTTGGACCCCAGCGGTGGTGAGGTGAGCGAGGATGCGCGGGGTGGTGGGGGCGGCCTCGGATGCAGAGGCGACGGAGGCGGCGGGCGGCGGTCGACGTCGACCATCTGGAGGCGGAGGCGCGCCGGTGCCTCTCTTGGATCTCGGCCACCACGCTGGAGC | |||||||||
gi|88534570|gb|CI463304.1|CI463304 CI463304 Oryza sativa (japonica cultivar-group) 40 days after pollination pistil Oryza sativa TGATGGACCTTCGGTGTACTT EST sequence (targeted fragment marked with yellow): ATTCAGAAGAACATTGAAGTTCCATCATTTATTCACCACATATATATAAATAGATGCTNTCTGACAAAAGAAAGCACTAATTATTTAGCAACCCCACATAGTCACACACACACAGCTAACTATAGTAGCCTAGTGACCGGTTCTTGGGGTCCTAGGATACCCAAGCCAGTAGCAGACACCACCAGGCCCATTGGGGATGTCCACGTTGCAGAACGCCGGGAGGCTCGCCGCCGCGCGCTCCAAGTCCCCTCTCCGGCAGCCGGGGAACACCTCGGCCATGGGGTGCCCGGNCTCGGTGGCGCCGAGCTCCCTGTACATGCCTGACAGCATGTGATCGAGCGCCCCGCACCTGCACCACCCGTCGTCCACGGCGGCGAGCTGNCGGCAGCAGCCTTGCCAGACTTGCTCGT | |||||||||
gi|88474401|gb|CI411672.1|CI411672 CI411672 Oryza sativa (japonica cultivar-group) callus 100ppm ZnSO4 for 1week Oryza sativa Ja TGATGGACCTTCGGTGTACTT EST sequence (targeted fragment marked with yellow): GATCGCCATCAAGGCACCAAACCATGCATTCACTTTGATGCACAGATGCATGTACACATCAGAGCAATACATCCGTTCCTAGCTCTCCTTATGTACAACGAAAGTCCATCAACATATAGGGAGAAATAACCTGTAGTCTTTTAGGCTTTTTCCCTTCTCCATTTTCTTGGCTTATGCTTGGAATGACTCATGAAAAGTTCTAGGCAGAAGGAAGGATGTCGAGGGCCACTTCCTTCAGTGATGGCATCTCTTCTTGTTCATGCAAGCAGAAGAAACTGCCACCTATGTTTCTCAGAACCTTCCAAGGCCCAGGATAACACCTGAAAAGTGTTCCTCCTTTGAGTCCCTTAAAATTGTGAATATAATAAACTGTCTCCAGCTTTGGAAGAAATGTTTTGGA | |||||||||
gi|58606912|gb|CK034945.1|CK034945 36629rsiceg_9751.y1 Oryza sativa cv. 93-11 tillering whole plant cDNA library Oryza sativa cD TGATGGACCTTCGGTGTACTT EST sequence (targeted fragment marked with yellow): GCACGAGGTTTTTTTTTTTTTTCCAACCAAGATTTAAATCTCATGATAATACCAAACGCTGGTTCGCGAGTACACTCAAGGTCCATAGACGAAACATAAACCATTGGGAAATTCTGATGATGAGCATATAGCATTCCTCTTTTAGTAAGGCTGCCTCCGACAAGACTCCATTTTAGATTTTGTTGAAAGCAACAATGTCACAACTCTGAATAAACGCATTAGCTGGTTCCGTGTAAAAATAATCCTCAATGAGACTGTCCACAGAAACAAGATCGTCCACAATGGTCATCATAATTTGCAACTTCTTGATGCCATATCCAACTGGTACAAGTTTGGATGCACCCCAGAGCAGGCCCTCCATCTTCACATTCCTCACAGCTTCCTCAAGCTTTGCCATGTCTGTTTCGTCATCCCATGGCTTTACATCTAGCAGAACCGATGATTTCCCAGATTCTTTCTTCTTTCCAGAAGCCTTGACAGCTGCGGCCCGTTCTTCTGCTGCTTTCTTCTCCTCTTCAGTCTCCTCACCAAACAGATCAACATCGTCATCATCTTCTTCATCAGCTGCTGGTGCCTTTTGGTCAGCAGTTGGAGACACAGAACAAGCAGTTGACT | |||||||||
gi|86845081|gb|CI341031.1|CI341031 CI341031 Oryza sativa (japonica cultivar-group) flower Oryza sativa Japonica Group cDNA clone TGATGGACCTTCGGTGTACTT EST sequence (targeted fragment marked with yellow): CTCAACTCACAAAAGGTCACAATTTATTAATAGACAGGAATTCTTGGTAGAGTTTATTTACGTATATACAAAACATGTGGAACAACAAATGAATAACACATTTAAAGAAACTCAGCTTGGTGTGATACATATCATGCATGGTTGCTTCTCAGCTTTTTCTTAATCAGTCTTGCACTAGCAATAGTATATATGACCTCTGAAGTTCTTAAGCCACAGAATGTACTGGTGACCTTTATTCTATGTCTGAATGATATAGCCTGCCATCAGAGTTCACTGAAGGACCATCAGGGGCCCATCTGTTGGCGCTTGGGTGCGGAAGGTTACACCCTCCCTGGCGCTCCCGGATTCCGGAACTCCCATTTGTAACCACAGAGAGATGATGGAGCATGATGGTGAGCTGCAGCCTTGGCAGCATGTTGCCCGGCGCAGATCCTCTTGCCGCTACCGAACACGTGGTACGTGCCTACCTCCGCTG | |||||||||
gi|88513357|gb|CI440863.1|CI440863 CI440863 Oryza sativa (japonica cultivar-group) leaf of seedling gamma-irradiated(45Gy), immi TGATGGACCTTCGGTGTACTT EST sequence (targeted fragment marked with yellow): GGAAAAGTACACTGAAGGTCCCTCAATTTATCATCAAGTTACAGAATCATCCCCCAACCACAAAACCGGATACAACACATCCTCCAACTTATAAAACCAGTGCAAACTAGGTCCCTCGGCGGTTTTAAGCCTGGTTTTATATAACGTGGCGGCTAAATCAGCGTGAGACCCACATATCAGGATGCCAAGTCAGCAAGCGCCTCTCCGGCTCTCCCTTCCTCTCCTTTCCTCCTCCCCCTCTCTCTCTCTCTCTCTCTCTCTCTCGCCCTTCTCTGATTGGGCAGGCAGGCCGACGGTGGGCAGGAGGTCGCTGGGGTGAGGAGGTCCGACGGCNGNCCGGGGATGCGGCGGCGGCCAAGTGGTGGCGGAAACACCTCCACACCGATCTGAACCTCCGTGACATCTCCGGACTTCTTGG | |||||||||
gi|87011842|gb|CI283729.1|CI283729 CI283729 Oryza sativa (japonica cultivar-group) supermix Oryza sativa Japonica Group cDNA clo TGATGGACCTTCGGTGTACTT EST sequence (targeted fragment marked with yellow): ACAATTTCAGGAAAAAGTACACCGAAGGTCCCTCAACTTATTTTCGAGTTATAAAATCATCCCCCAACCACAAAAACAGATACGGACGTTCCTCAACTACCAAAACCGTTCACTTTAATCTTCTGATGGTTTTGATCCTGATTTTGTGTGACGTGGCGGTTAAGTCAGCGTGGGACCCACGTGGGCCCCACGTGTCAGAATGCCTGGTCATCTCTCTCCTCCCCTCTTCTCTCCTTTCCTCATGTCTATCTGACTTCTCCCCGATTCGATGGCGACGCGGCTGCGGTGGTGGCGGCGACGGGCGACGCAGCAGCAGTGGGGGGAGGACCTGCGGGCGGGCAGTGGTGGAGGGGCGGCGGGGGTAGGAGCAGCGCGCGGGCTCCCCCGCCGGCCGCCACCCACGAGGCCCACAACCACGAGGCGGCGTGTGCAGCGTCAAGTTCGGCTGCTCCACCACGACGGCCGGCTCGTTCCCGGACGACGGGCTGGTCGGGCTCAGCGGCGACGCGGTCTCCC | |||||||||
gi|88515969|gb|CI443623.1|CI443623 CI443623 Oryza sativa (japonica cultivar-group) callus UVB iradiated callus, immid after trea TGATGGACCTTCGGTGTACTT EST sequence (targeted fragment marked with yellow): GGAAAAAGTACACCAAAGGTCCCTCAACTTGTCATCGAGGTACAGAATTATCCCTCAGCCGTAAAACCAGACGTAATATCTCTCAACTTACAAAACCGTTCACTTTTTGACCCCGGTTTTATCCAACGTGGTGGTTGAGTTAGCGTGGAATACACGTAGACCCCATATGCTAGGTGTCCACGTCAGCCCCCCTCTCTCTCACTCATCTTTTCTCCTCTCTGCAAGGCGACGCACGGGTGGGGAGGTCACCGGGGCGAGGCGGGAGAGGAGATCCGGCAGTCGGCGATGCGGCGGTGGCGGCTGCGACACTGGAGAAGGGAGGCAGCTCATGGCGGCGGCCGACGACGATGCGGGAGAAGGGAGAGCGTCACCGCGCGTGCGACCTCGGGGTCGGACCATCAAAGAGGCCCGGGAGGTGGCGGCGGCGGCGACACGGTAGAAGGGGAGGACGTTGCCACACGGGTGAGCTCGAGGACGAAGATCCCAGTC | |||||||||
gi|88376639|gb|CI537943.1|CI537943 CI537943 Oryza sativa (japonica cultivar-group) root of seedling 0.1M NaCl for 3 days Oryza s TGATGGACCTTCGGTGTACTT EST sequence (targeted fragment marked with yellow): AGATAAACTTATTCCATATAAAAAAAGGGCAAACTAAAGCCCAAATTGAATTGAAATCTGGCCTTTGAAGATTCCATAATGTACCAGGAAAAAGTANACCGAAGGTCCCTCAACTTATCATCGGGATAAAAAAACATCCTCGAACCAAAAAACCAGATATNAGGGATNTCTTAACTATANNAAAACCGGTTACCCGAGCTTCTTAGGTGGTTTTCAACCCGGTTTGGTCTTANGTGACGGTTNTGTCAGCCGTGGGACCCACGTGGGCNCCACATGTCAGNTGGCTANGTCAGCCTCTTTCTGTGTCTCTTTTCCCCTCTTCTTCCCTTTTGAACACAGAAGGAAAACACCACCGGCCACCTCCAATTCCCACCTCCGCCGGCNCGGCGCTGCGGGAAG | |||||||||
gi|88209437|gb|CI209286.1|CI209286 CI209286 Oryza sativa (japonica cultivar-group) same as Lib 33(supermix) Oryza sativa Japonic TGATGGACCTTCGGTGTACTT EST sequence (targeted fragment marked with yellow): TTTTGGCGAGCAGCCGCGCAGCGGCGCAGGCACTCGTTTTCTTTTGGAAAAAGTACACCGAAGGTCCCTCAACTTGTCATCGGGATAAAAAACGTTCTCGAACCACAAAACCAGATATGTGGGGTCCCTTAACTATATAAAACCGGTCACCTGAGATTCTTCAGTGGTTTTGACCCCGGTTTTGATCTAGGTGGCAGCTGAGTAAGCATGGGACCCACATGTCAGGTGACACGTCGTCACCTCTCTTTTCCCCCTTTCTCTCTCTTCCTCCTCTCTCTATCTTCTCTGTGCTGGCGAGGCGGGGCGCGTCGACTACCAAGCTCCACCGCCGCACCCGACGACGACGACGATGACACACAAGCGCGAGGCTGGGCGGAGAAGGGGCGGTGGGCACCAGCCGCAACGTCAGCCTCTGCCTCCACCTACGTCGCCGCACCCGACAACAATACACGCGTGCAAGGCCGGGTGGAAAAGGGGCGGCGGCCGGCGGAGTGGCGGCGGGCACCAGCCGCAGCGTCAGCCACCGAGGC | |||||||||
gi|88539622|gb|CI469594.1|CI469594 CI469594 Oryza sativa (japonica cultivar-group) 10 days after pollination pistil Oryza sativa TGATGGACCTTCGGTGTACTT EST sequence (targeted fragment marked with yellow): CGGGGAAAAGTACACCGAAGGTCCCTCAACTTGTCATCGAGTTACAAAATCATCCCCCAACCACGAAATCAGATATGAAACATCCCTTATCTTANAAAACCGTTCANTTTAGGTCACTCGGTGGTTTTTACCCCGGTTTTATTCCACGTGGGCGGCTGAGTCAGCGTGGGACCCACGTGGGCCCCACATGTCAGGATGTCACGTCATCCCATCCTCTCCCTTCCTCCTCTCTCTCACTTCTCTCCTCTCGGGTAGGCTAGCCAGCGGGTGGGGAGGAGGTCGCCGACAACAGGCGCGAGGACGACAGGGTCGGCGGCGAACACGTTGACGGTGTNGGATTCGGTGACGGCGGCGGCGGCGACATNGACGAGGTNGGAGATGGAGATGACGGACACCTATACC | |||||||||
gi|88476963|gb|CI414234.1|CI414234 CI414234 Oryza sativa (japonica cultivar-group) callus UVB iradiated callus, immid after trea TGATGGACCTTCGGTGTACTT EST sequence (targeted fragment marked with yellow): GGGATAAATGGCTCCATGTTCTTTTTTACTAGTTTGCATATAGGAAAAAGTATACCGAAGGTCCCTCAACTTGTCATCGAGTTACAAAATCGTCCCCCAACCACAAAACCTGGTATCCAACGTCCCTTAACTAACCAAAACCGGTCACAAATAGTCCTTTGGTGGTAATGACCCGGTTTTGTTCTACGTGGTGGCTGAGTCAGCGTGGCACCCACGTGGGCCCCACATGTCAGGCTACCACATCAGCCTCATCCCTCTCCCTTTTCCCCTCTTCTCTCCCTTCCTCAACCGGCGGGAGAAGAAGGGCGTCGGCGGCCGGCGACGGACGACGCGACGGCGGTGATGGCGGCCATGGGCGACGCGACAGCGGTGGGGGGAGGAGCTACGGGCGAC | |||||||||
gi|88232995|gb|CI232844.1|CI232844 CI232844 Oryza sativa (japonica cultivar-group) Panicles mixture of one, two, three weeks aft TGATGGACCTTCGGTGTACTT EST sequence (targeted fragment marked with yellow): TTTTCGTCTATGGAACACTTACGGCCCAGAGGATTTTTGGTAGGGAAGTACATCAAAGGTCCCTCAACTTGTCATGGAGATACAAAAGGAAAAGGTACACCGAAGAGAATGCTTGATGGAGATTCTTCGCCGCGCCGAGCAGACGACCAAGACCAAGACTTTCATATGACAGAAACAGCACCCTAGCTTTTCCTGTTACATCTCAAATTGTATTTATTTTGTTCGCCTAGCACCTAAGGGAGAGAAGAATGGAAGGAGGAAGTAGAAAGAAAGTCAGTTTCATCAGTACATAATCACAGGTGTTGCTTGATATATTGTAGGACCAGGTGTGCCATTGTATCCTGTCTACAGAGCAGTATTCTGGATTCCTGATTGTTCATTAATGCCATCATGGTAGATTAATTGGTTATATCATCTGAAAGATCCAAATGAGCATAGTGCAGTTAAG | |||||||||
gi|88319161|gb|CI513225.1|CI513225 CI513225 Oryza sativa (japonica cultivar-group) 2 nuclei stage pistil Oryza sativa Japonica G TGATGGACCTTCGGTGTACTT EST sequence (targeted fragment marked with yellow): CTTTTTTTTTTTTAAGTACACTGAAGGTCCCTCAATTTATCATCAAGTTACAGAATCATCCCCCAACCACAAAACCGGATACAACACATCCTCCAACTTATAAAACCAGTGCAAACTAGGTCCCTCGGCGGTTTTAAGCCTGGTTTTATATAACGTGGCGGCTAAATCAGCGTGAGACCCACATATCAGGATGCCAAGTCAGCAAGCGCCTCTCCGGCTCTCCCTTCCTCTCCTTTCCTCCTCCCCCTCTCTCTCTCTCTCTCTCTCTCTCTCGCCCTTCTCTGATTGGGCAGGCAGGCCGACGGTGGGCAGGAGGTCGCTGGGGTGAGGAGGTCCGACGCCGGNCGGGGATGCGGCGGCCCCCATCTGGTGG | |||||||||
gi|88254400|gb|CI353224.1|CI353224 CI353224 Oryza sativa (japonica cultivar-group) flower Oryza sativa Japonica Group cDNA clone TGATGGACCTTCGGTGTACTT EST sequence (targeted fragment marked with yellow): GGTCTCCGAACGGAATTTGTTTCACTTTTTGGTCTTCTCTTACAGCGACATATTAATGAAGTATACATACATCAGCTCAAGTACGATTTTCCATACAGAAGAACCTAAAACATGGTTCAAGTGTGCAGAATGTCCATCAGGCAGTTTTTGT | |||||||||
gi|66925201|gb|CX112049.1|CX112049 EI073N03 A normalized whole-life-cycle cDNA library of rice Oryza sativa Indica Group cDNA cl TGATGGACCTTCGGTGTACTT EST sequence (targeted fragment marked with yellow): ACGGGCCTCAAGGAGGCAGCAATAATCCCGTCCCGGCCCAAATGTATGGGCCGCCCAGAAAAATAAGTCTTTTTTACATTCCTCAACTCTTATCCACTAATTAAAGGGAAAAGTACACGCAAGGTCCCTCAACTTGTCAGCGAGATACAAAATCGTCCCTGAACTGCAAAACCGGACATCCGGCGTCCCCCAACTTACAAAACCGGTCACAAAAGGTCCCTCAGCGGTTTTGACCCCGGTTTTGTCCCACGTGGCGGCTGACTCAGCATGGGACCCACGTGGGCCCCACAGGTCATGGAGACCACGTCAGCACCCTCTCTCTTTTTCTCCTCTCTCTCTCTCCTGCCTTCCCCTCGCTCTCTGCTCTCGCACAGGCGGCTGCGCGCGCGGCCGGAGGGTGGTGCGGCCGGCGACGGCGGCTCCCTGGTGGCGGCGCGCGGGCTCAGGGCAGCGCGAGCTCGCCGGCCTCCTCGTCCCCCTCGTGCGGTCGGTGATGGCGGACGAGCGACGAGAAGCAGGCGGTG | |||||||||
gi|88974077|gb|CI002739.1|CI002739 CI002739 Oryza sativa (japonica cultivar-group) etiolated shoot Oryza sativa Japonica Group c TGATGGACCTTCGGTGTACTT EST sequence (targeted fragment marked with yellow): GATTCGACCTGGCCCATGGGGCTATAGCTGCAGCTTGCTACCATTGTGCTATGGGAAAAGTACACGCAAGGTCCCTCAACTTGTCAGCGAGATACAAAATCGTCCCCGAACCGCAAAACCGGACATCCAGCGTCCCCCAACTTACAAAACCGGTCACAGAAGGTCCCTCGGCGGTTTTGACCCCGGTTTTGTCCCACGTGGCGGCTGACTCAGCGTGGGACCCACGTGGGCCCCACAGGTCATGGAGACCATGTCAGCACCCTCTCTCTTTTTCTCCTCTCTCTCTCTCCTTCCTTCCTCTCGCTCTCTGCTCTCGCACAGGCGGCGGCGCGCGCGGCCGGAGGGTGG | |||||||||
gi|86497094|gb|CI139727.1|CI139727 CI139727 Oryza sativa (japonica cultivar-group) mixed callus (Normalized Library) Oryza sativ TGATGGACCTTCGGTGTACTT EST sequence (targeted fragment marked with yellow): TTTTGGTTAAGCACGCGTACTTTTTCGCGCCACAGTTATCATTGGGCCACACATTTATGGAGAGGAAAAAGTACACCGAAGGTCCCTCAACTTGTCATCGAATTACAAAATTGTCCTCCAACCACAAAACCAGATACAACGTATCTCCCAACTTATAAAACCGTGCAAACTAGGTCCCTCGGCGGTTTTGAGCCTGGTTTTGTCCGACGTGGCGGCTGACTCAGCGTGAGACCCACATGTAAGGATGCCACGTCAGCACCCTCTCTCTTCCTTTTCCTCTCCCTCCCTTCTCTCTCTCTCGCTTGTCTCCTCTGCAAGTAGCAAGCCGGCCGGCGGGCGTGGAGAGGTCGCCCGGGGCGAGGCGGGAGAGGAAGCGGCGGTGGGCGACACGGCGGCGACGGCGGAGGCTACGACGCCGGAGGGGAGGCCACCGCGGCGGCGACGGCTGAGGCTGCGACGCTGGAGGGGAGGCCGCCGCGCCGAGGTTGGATTCTCCCTTCCGCCGCGCCGACAGGAGGAGCCGGCGGCCGGCGATGCAGGGGCGGCGGTAGTGGCGAGACGGGAGAAGGAGAGGGCATCGGCGGCGGGAGCACTGCATGGGGAGAGCGAGGACGATGGGGCACCTCGGCGTCGAGAACCTCCTCTCCATCCCCGGGCGCCGCGACGGCGGAGGCTGCGACACTGAAGGG | |||||||||
gi|88473693|gb|CI410964.1|CI410964 CI410964 Oryza sativa (japonica cultivar-group) callus UVB iradiated callus, immid after trea TGATGGACCTTCGGTGTACTT EST sequence (targeted fragment marked with yellow): GGAAAAAGTACACCAAAGGTCCCTCAACTTGTCATCGAGGTACAGAATTATCCCTCAGCCGTAAAACCAGACGTAATATCTCTCAACTTACAAAACCGTTCACTTTTTGACCCCGGTTTTATCCAACGTGGTGGTTGAGTTAGCGTGGAATACACGTAGACCCCATATGCTAGGTGTCCACGTCAGCCCCCCTCTCTCTCACTCATCTTTTCTCCTCTCTGCAAGGCGACGCACGGGTGGGGAGGTCACCGGGGCGAGGCGGGAGAGGAGATCCGGCAGTCGGCGATGCGGCGGTGGCGGCTGCGACACTGGAGAAGGGAGGCAGCTCATGGCGGCGGCCGACGACGATGCGGGAGAAGGGAGAGCGTCACCGCGCGTGCGACCTCGGGGTCGGACCATCAAAGAGGCCCGGGAGGTGGCGGCGGCGG | |||||||||
gi|86496997|gb|CI139630.1|CI139630 CI139630 Oryza sativa (japonica cultivar-group) mixed callus (Normalized Library) Oryza sativ TGATGGACCTTCGGTGTACTT EST sequence (targeted fragment marked with yellow): CCACCTCTTGTCATGCTTTCTCCTTCTTGGAAGCATAACACAGGTACTTGGGGTAAGGCTGGATCTCTGCTCGTGGACCTGTGGTAACAATTTTATTGGAAAAAGTATACCCAAGGTCCCTCAACTTGTCATTGGTTTATCGTATACGAGGTCATCCGAGGTCCCTAGGTGGTTTTGACCCCGGTTTTGATCTACGTGGCGGCTGAGTCAGCGTGGGACCCACATGGGCCCCACCTGTCAGCTGGCCACGTCATCACTCTCTCCCCTCCTCTCCTCCTCTCTCACTCTTCTCCTGTTTGGGTAGGCAGCTGGGGAGGACGTCGGTGGGTTGCTGCCTTCGGTGGGGAGAGGAGGGAGAGGACGAGGGCCGTTCGGCGGCCGGCGACGGGCGACACGACGACGGCGGCTGGCGACTGGCGACGCGCCGCCGCCATTGCTCTCGTCCGCCATTGCAGAAGCCACAGGCACGGAGGCGGACCGCCATCGAGGGATGAGGTAGGCAAGCAAGGGGGGCCGGGGAGGCCGGCGTCGACCTCCTCACCGGCCGTGA | |||||||||
gi|88484131|gb|CI421402.1|CI421402 CI421402 Oryza sativa (japonica cultivar-group) 4 days after transferring callus Oryza sativa TGATGGACCTTCGGTGTACTT EST sequence (targeted fragment marked with yellow): GGTCCCTCAATTTGTCCCAACTTTCAAAGGAAAAAGTACACCCAAGGTCCCTCAACTTGTCATCGAGTTACAAAATCGTCCCACAACCGCAAAACCAGATATATGATATCTCTCAACTTACAAAACCGTTCACTTTAGGTCCCTCGGTGGTTTTGACCGCGGTTTTGTCTGACGTGACGGCTGAATCAGCGTGGAACCCATGTGGGCCCCACATGCCAGGATTCCACGTCATCACCCTATCTCTTTCCCCTCCTCTCCCTTCCTCCTCTCTCTCTTTCTCTCTCTCTCTCACTTTTCTCCTCTTGGGCAGGCCGGCCGGTGGGTGGGGAGGTGGTCGCCGACAGCGGGATGCAGTGGCTGCGGCGCGTACCTGGCCGTGCCGCCGGGGGCGCGGTCGGTGCGATGCGCGCTCTGCCATGCCGTGACGCGCG | |||||||||
gi|88215313|gb|CI215162.1|CI215162 CI215162 Oryza sativa (japonica cultivar-group) Panicles mixture of one, two, three weeks aft TGATGGACCTTCGGTGTACTT EST sequence (targeted fragment marked with yellow): TTTTTTTTTTATAGCCAAAATAAACCTTATTAAGTTTAGAAAAAGTACACCGAAGGTCCCTCAACTTGTCATCGAGTTACAAAATTGTCCCCAAACCGCAAACCAGATATCCGGCATCCCTTAATTAATCAAAACCGGTCACAATAAAACCTTAAGTGGTTTTAACCCCGGTTTTATCCTACGTGGCGGCTGAGTCAGCATGGGACCCCACGTGGGCCCCACATGTCAGGCTAAGTCACTCTCCCTCTCTTCTCTTCCTCAGTTACTCCTCTTTCTCTCTCTCTCTGTGCCTGTAGGCCGGTTGGCGGGGTGAGGCGGGAGAGGAGGGCGGCGCCACGACGGCGGCCGACGGCGGCAGCAGCCCGGCCGAGCTCCTCGCACGGCCGGTGGGGGAAGCCTTGGAGTTGGGCGGCATCGAAGGCATGGGGAGGAGACAGGCAACGGCCAGCGAAGGGGCGGCGACGCGCAGTGGGGTGGCGGATGGGGAAGCGGCGCGGCATGGCGGATGGGGAAACGACCGCGGCGAGGA | |||||||||
gi|88431356|gb|CI559924.1|CI559924 CI559924 Oryza sativa (japonica cultivar-group) root of seedling 2ppm NAA(naphthalene acetic TGATGGACCTTCGGTGTACTT EST sequence (targeted fragment marked with yellow): ATGTAAAACGGAGGAAATAATATTTAAGGAAAAAGTACACCAAAGGTCCCTCAACTTGTCATCGGGATACAAAAACGTCCTCGAACCGCAAAACCAGATACACGAGGTCCCTTAACTATATAAAACCGGTCACCCGAGGTCCTTAGGTGGTTTTGACCCCGGTTTTGTCCTACGTGGCTGCTGAGTCAGCGTGGGACCCACGTGGGCCCCACATGCTAGGAAGCCACATCATCACTTCCCTCCTTTTCCACTTCTCTCTTTCTAGGCGGTTTCTCGGTGAGGCAAAGCGGCGGCGCGACGTCCGCAGGCGAAACGGGAGACAGGAGGGCGGNGGCGGCCCGACGGCCGCCGNGCCCCTGGGG | |||||||||
gi|88228811|gb|CI226662.1|CI226662 CI226662 Oryza sativa (japonica cultivar-group) mixed callus (Normalized Library) and mixed s TGATGGACCTTCGGTGTACTT EST sequence (targeted fragment marked with yellow): TAAGTACACCAAAGGTCCCTCAATTTGTCATCGAAATACAAAATCGTCCTCCAACCGTAAAACCAGATATACGACATCCCTCAACTTACAAAACCGTTTATTTTATGTCCTTTAATGGTTTTGAACCCAGTTTTCTCTGATGTGGCGGCTGAGTCAGCGTGGGACCCACGTGGGGCCCACCTGTCGGACTGTCCACGCCATCACCTCTCTCCTTCCCCTGTTTTCTCGCCTCCTGCCCTCCTCTCTCTCACTCGAGGCAGGGCGGCACGGGGCCGGAGGCGAGCGCGGTGGTGGGAGGAGGAGGGCGGCGGCCGCCGGGCGACCAGGACGACGGCCATGGAGCCTCCTCCCCTGTTCCAGTGCCCCATCTCGATGGAGCTAATGGAGGACCCCGTCACGGTGGCCACCGGCGTCACCTACGACCGCCGCAGCATGGAGCGGTGGTTCTTCAGGTACGGCAAGACGACGTGCTCCTCCTCGACGCCAACCGCCACGTCGCCGAGCGGTCGCTCCTCCTCCTGAAGCGCCTGTGTAAGTGCCCCGAGGGGCGGC | |||||||||
gi|88472590|gb|CI409861.1|CI409861 CI409861 Oryza sativa (japonica cultivar-group) callus 50ppm CuSO4 for 1 week Oryza sativa Ja TGATGGACCTTCGGTGTACTT EST sequence (targeted fragment marked with yellow): CATAATTCAACGGTAGCTTATAGGTTTTCACTATATTTCTAGTTTGTATTACATATTTTCAACCCGATGGTGAGTTGTTCCAAGCTGCTCCTCTGCTTTTTACTACTCCCTGTCAATAGGTTAATTAAGAGAGACATAACTCAATGTCAAAANAAGCTTACCAACCTCAATAACAACTAGGAAAAAGTACACCAAAGGTCCCTCAACTTGTCATCGAGTTACAGAATCATCACCTAACCAGATATATGATATCTCTAACTTAGAAAACTGTTCACTTTAGGTTCTTCGATGGTTTTGACCCCGGTTTTATCCGACGTGGCAGNTGAGTCAGCGTGGACCCATGTGGGCCCCACATGTCAGGGTGTCCACGTCACCTTTCTTTCCCTTCTCTCCCTTCTTTCTTCCGTC | |||||||||
gi|88227259|gb|CI228372.1|CI228372 CI228372 Oryza sativa (japonica cultivar-group) mixed callus (Normalized Library) and mixed s TGATGGACCTTCGGTGTACTT EST sequence (targeted fragment marked with yellow): TTTTTTTTTTTTTCGGAAGATAACATGATACACACCAGCTTCCATTTTACTGTGGGAAAAAGTACACCCAAGGTCCCTCAACTTGTCATCGAGTTACAAAATCATCCTTAAACCACAAAACCGGATATAATGCATCCCTCAACTTATAAAACCAGTGCAAACTAAGTCTCTCGGCGGTTTTAACTCCGGTTTTGTCCGACGTGGCAGCTGACTCAGCGTGGGACCCACGTGGGTCCCATGGGTCAGCCTCTTCTTCTCCTCCCCTCTCTTCCTCTCTCTCTCTCCTCTCACCACGGGCGGCTGACAAAGAGTAGATGGGGGCGGCCGGCGGCCGGCGAGGCAGGTGCTTCCACCGGCGGCGGCGGCGTCACCAAGCTCGGGCATCACCGGATGCTGCCCATGCTGACGTGCTTGGCTCATCACCAGCCCGCAGCGACAAGCCGACCGATGACGACGATGACGACGCCGCGACGGCAGTAATCGCGGCCTCAGCTTCCGACTCCGAGCAGCCGCCATTGTTGCCGCACATGGGGGGCGGCGAGCCGAGGAGGCTCATAGTTGCGTGCGCCGACCT | |||||||||
gi|88518630|gb|CI446284.1|CI446284 CI446284 Oryza sativa (japonica cultivar-group) germinating seeds Oryza sativa Japonica Group TGATGGACCTTCGGTGTACTT EST sequence (targeted fragment marked with yellow): GAGGGATCTCAAAATAATCTCGCTGTTAAGTTGAGGGACCTCCGGTGAACTTATTCCTTTTTTTTTTGGGCCAAAGCCTTGTCCCTACACAAGCCTAGTTAGTTAGCCTAGGAAAAGTACACCGAAGGTCCATCAACTTGTAATCGGGTTACAAAATCACCCCCAACCACAAAACCGTTCATTTTAGGTACCGTTCATTTTAGGTTCCTCGGTGGTTTTGACCCGGTTTTATCCAACGTGGCGGCTGAGTCAGCGTGGGGAGGAGGCCTGCATGTCAGACAGTCCACGTCAGCCACTTCTTACCCTCCCTTTCAACTCACTTCCTCTCTCCTCTCCTCTCCACGTCGATGGCCGGCGGAGAGCAGCCAGGGCGCGACAGGACAGTGTGACGAGCGCGGTCGTCGGTGCAACAGAGGAGCACGTCGCGGTCG | |||||||||
gi|89164117|gb|CI101205.1|CI101205 CI101205 Oryza sativa (japonica cultivar-group) Panicles one day after flowering Oryza sativa TGATGGACCTTCGGTGTACTT EST sequence (targeted fragment marked with yellow): TAATATGAAACGGAGGGAGTAGCTTGTTTGTTCATGAAACTAAAACTAGAAACATACTAAGAATCTAATATGCATATGGCAGTGGCACTAATAGTGGAAATCTATTTATGGAAGAAAAAAGTACACCAAAGGTCCCTCAACTTGTCATCAAATTTCAAAATCATCCTCCAACCACAAAATCAGATATAGGACATCCCTCAACTTACAAAACCGTTCATTTTAGGTCCTTCGGTGATTTTGTCCCTGGTTTTGTCCGCCGTGGCGGCTGAGTCAGCGTGGGACCCACATGGGGCCCATCTGTCAGACTGTCCACGTCATCACCAATCTCTTTTCACTGTTTTCTCACCTCCTCCTCTCTCTCACTCTTCACCTCATTCGGGCAGGGCAGCGGCAGGTGGGGAGGAGGCCGGCGGGGCGAGGCAGGAGAGGAGGTGCGGCAGCCGATGGCGGCGGTGGTGGGAGCATGGGGGGAGGCGAAGGGGGAGCATGGGG | |||||||||
gi|88481222|gb|CI418493.1|CI418493 CI418493 Oryza sativa (japonica cultivar-group) 14 days after transferring callus Oryza sativ TGATGGACCTTCGGTGTACTT EST sequence (targeted fragment marked with yellow): ACTGATACTCAATACTCTACTCCTAACAAGTTTAGGAACGAGGATATGGGTCAGGCCGAGACGGCCCACAATAATATTACTCGATGGGCTTGTAGTATCTAATAGGAAAAAGTACACCAAGGTCCCTCAACTTGTCATCGAGTTACAAAATCATCCTCCAAACACAAAACCAGATATCCGGCATCCCCCAACTAATCAAAACCAGTCACAATAGATTCTTCAGTGGTTTTGACCCTAATTTTATCTTACGTGGCGGCTGAGTCAGCTTGGGACCCACGTAGACCACACATGTCAGGATACCACGTCAGCGCACACCTCTTCCCCCTCCTCTCCCTTCCTCCTCCTCTCTCTCTCTCTCTCTGGGCAAGCCGGCCGTCCGGTGGGGAGGAGATCGTCGGGGCGAGGCGGGAGAGGAGGTCCGGCGGCCGGCGACGCGGGACGCGCGCGCGGTGCTCGTGCGTACCTCTAACTCCATCAAGGAGGCCGAGCTCCGATTCGAGGAGA | |||||||||
gi|86500939|gb|CI143572.1|CI143572 CI143572 Oryza sativa (japonica cultivar-group) mixed shoot (Normalized Library) Oryza sativa TGATGGACCTTCGGTGTACTT EST sequence (targeted fragment marked with yellow): GTTTAAAAAGATCAAGAGACTTGATTTGTATAGGTTTTGCTAGTTGGGCTACGCATTATAGCTGGTTTTACAATTGAGGGATACGATTCAAAACTCGACTCCTAGACAAAGGACCTACAATTGGACGTTATCCCCTGTTAAAAGGCACACGGCTAGACCAGACCAGACCACCTACGTTGATCGTTCATCGTGTCCGAAGCCTAATAAAGCCCAAACAAAGGATTTTCGGCCCAGCACAGCCTAGCTCCACATAGGAGAAAGTACACCCAAGGTCCCTCAACTTGTCATCTAATTACAAAATCGTCCCCCAACCGCAAAACCGCACACAAGGCATCCATCAACTTACAAAACCATTGTAGACTAGATCACTCGGCGGTTTTAACCCTGGTTTTGTCCGAAGTGGTGGCTGAGTCAGCGTGAGACCCATGTGGGACCCACATGTCATTGAAACATTAGTCTATTTTCCCACACTTCTTTCTATCCCCTCCCTTCCAAGCAGATCGGCAACGGCGTGGGGAGCGGCCGTCCGGCCGGCGGAGCGGGCAGGCGACGGCGCGGGGAGCGGCCGGGCGGCGGGTGCTCGTCCTCCTGGTCATCGAGGCCAGTGGCCGGCATGCTGGTCGGCAACGGGCGCAAGCACCAGGCTCTGA | |||||||||
gi|89172882|gb|CI040775.1|CI040775 CI040775 Oryza sativa (japonica cultivar-group) etiolated shoot Oryza sativa Japonica Group c TGATGGACCTTCGGTGTACTT EST sequence (targeted fragment marked with yellow): TGGATATGACTCTAAAATATGTAGTCCTTTTTTATAAATTTATTTATGACTAAGTCTGTAGTTTGTGATATGTTTATAACACAAAGGAACAGGTACACCCAAGGTCCCTCAACTTGTCAGTGAGATAAAAAAACGTCATCGAACCGCAAAAACAGATATATAGGGTCCCTTAACTATACAAAACCGGTCACCCGAGATTCTTCGGTGGTTTTGACCCCGGTTTAGGTCTATGTGACGGCTGAGTCAGCATGGAACCAACGTGGGTCCCATATGTCAGAATGCCACGTCAGCTGCTCCTCGGTTCCTCCTCTCTCTCTCTCTCTGCCTGTTGAGCGCGAG | |||||||||
gi|88222027|gb|CI221983.1|CI221983 CI221983 Oryza sativa (japonica cultivar-group) mixed callus (Normalized Library) and mixed s TGATGGACCTTCGGTGTACTT EST sequence (targeted fragment marked with yellow): TAGAGCAAACTTTTAAAATTCAAATTTTAATGGAAAAAGTACACCGAAGGTCCCTCAACTTGTCGTCGGGATACAAAAACATCCTCGAACCGTAAAACCAGATATGCGGGATCCCTTAACTATACAAAACCGGTCACCCGAGATCCCTGGGCGGTTTTGACCCCAGTTTTGTCTTATGTGGTGGTCGAGTCAGCATGAAACCCATGTGAGGCCCATGTCAGGTGTCTACGTCACCCTCTCTCTTTCTCTGTATCTCTCCTTCCTTCCTCTCGCTCTCTGCTCTCACCTTGCAGGGCATGGCGATACCGGTGCTAGGGCGCCCACGGCGGCGCGCACTGCTGGAGGATGGTGCGGCCGGCGACGGCGGCTCCAGGGGCGGCACGAGGTTCCCCTAGGCGGCGCACCAGTGGATACATCATGAGGACAAACGACGGAAGAAGGAGGAGAAGATTTTCGATTCATAGATAATCACTCCTCCGTGTCG | |||||||||
gi|88508407|gb|CI435913.1|CI435913 CI435913 Oryza sativa (japonica cultivar-group) 4th leaf leaf 1mM ACC(1-aminocyclopropane-1-c TGATGGACCTTCGGTGTACTT EST sequence (targeted fragment marked with yellow): AGAATAGTTTCCTTCTTTTTTTAGAAAAAGATCTCTTTCTTTTTCCAGAGAAGTGCAGTTCTTAACTACGGATGCTGAAATAGTAGGATACGCGAGAACATCAGTGTGAACTGGGCCGTCAGTTTGTTATACGGAATATCTGGGCCGTGCGTAATCAAGTATAGGAGATCTCAGCTCGTTTTGAAAAAAGTACACCAAAGGTCCCTCAACTTGTCATCGAGGTACAGAATTATCCCTCAGCCGTAAAACCAGACGTAATATCTCTCAACTTACAAAACCGTTCACTTTTTGACCCCGGTTTTATCCAACGTGGTGGTTGAGTTAGCGTGGAATACACGTAGACCCCATATGCTAGGTGTCCACGTCAGCCCCCCTCTCTCTCACTCATCTTTTCTCCTCTCTGCAAGGCGACGCACGGGTGGGGAGGTCACCGGGGCGAGGCGGGAGAGGAGATCCGGCAGTCGGCGATGCGGCGGTGG | |||||||||
gi|86494528|gb|CI137161.1|CI137161 CI137161 Oryza sativa (japonica cultivar-group) mixed callus (Normalized Library) Oryza sativ TGATGGACCTTCGGTGTACTT EST sequence (targeted fragment marked with yellow): TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGAGGAAAAAGTACACCGAAGGTCCCTCAACTTGTCATCGAATTACAAAATTGTCCTCCAACCACAAAACCAGATACAACGTATCTCCCAACTTATAAAACCGTGCAAACTAGGTCCCTCGGCGGTTTTGAGCCTGGTTTTGTCCGACGTGGCGGCTGACTCAGCGTGAGACCCACATGTTAGGATGCCACGTCAGCACCCTCTCTCTTCCTTTTCCTCTCCCTCCCTTCTCTCTCTCTCGCTTGTCTCCTCTGCAAGTAGCAAGCCGGCCGGCGGGCGTGGAGAGGTCGCCCGGGGCGAGGCGGGAGAGGAAGCGGCGGTGGGCGACACGGCGGCGACGGCGGAGGCTACGACGCCGGAGGGGAGGCCACCGCGGCGGCGACGGCTGAGGCTGCGACGCTGGAGGGGAGGCCGCCGCGCCGAGGTTGGATTCTCC | |||||||||
gi|88726984|gb|CI750639.1|CI750639 CI750639 Oryza sativa (japonica cultivar-group) library (Kikuchi S) Oryza sativa Japonica Gro TGATGGACCTTCGGTGTACTT EST sequence (targeted fragment marked with yellow): TTTCTTGGAAAAAGTACACCGAAGGTCCCTCAACTTGTCATCAAAAGATATAAAACGTACTCGAACCGNAAGGTGCCTTAAATATAAAAAACCGGCTTAAATATACAAAACCGGTCACAATATATCCCTCAGTGGTTTTGATTCCGCTTTTGTCCTACGTGGCTGCTGAGTTANCGTGGGACCCACGTGGCGCCCCTCATCTACC | |||||||||
gi|89197574|gb|CI012355.1|CI012355 CI012355 Oryza sativa (japonica cultivar-group) etiolated shoot Oryza sativa Japonica Group c TGATGGACCTTCGGTGTACTT EST sequence (targeted fragment marked with yellow): TTTTTTTTTTTTTTTTGGGCTAACCACCATGGATGGGTCGGAATAGAGGAGGGAAAAGTACACGCAAGGTCCCTCAACTTGTCATCGAGATACAAAATCGTCCCTAAACCGCAAAACCGGACATCCGGCATCCCCCAACTTACAAAACCGGTCATAAAAAGTCCCTCGGCGGTTTTCACCCGGTTTTGTCCCACGTGGCGGCTGACTCAGCGTGGGACCCACGTGGGCCCCACATGTCATGGAGACCACGTCAGCCTCCTCTCTCTCTTCTCTTTCCCTTCCTCTCCCTTCCTCATCTCTCTCTCTCACTTATCTGCAAAGCTAGCCGGGGCGAGCAGGAGAGGAGGAGGGCGGCGCCACGACGGCGGTGGCGGCGGACGTAGTGGGGAAGCACGGCGGAGGCGCGGGGAGCCCGGA | |||||||||
gi|88227691|gb|CI227171.1|CI227171 CI227171 Oryza sativa (japonica cultivar-group) mixed callus (Normalized Library) and mixed s TGATGGACCTTCGGTGTACTT EST sequence (targeted fragment marked with yellow): TTTTTTTTGGTCGGAATAGAGGAGGGAAAAGTACACGCAAGGTCCCTCAACTTGTCATCGAGATACAAAATCGTCCCTAAACCGCAAAACCGGACATCCGGCATCCCCCAACTTACAAAACCGGTCATAAAAAGTCCCTCGGCGGTTTTCACCCGGTTTTGTCCCACGTGGCGGCTGACTCAGCGTGGGACCCACGTGGGCCCCACATGTCATGGAGACCACGTCAGCCTCCTCTCTCTCTTCTCTTTCCCTTCCTCTCCCTTCCTCATCTCTCTCTCTCACTTATCTGCAAAGCTAGCCGGGGCGAGCAGGAGAGGAGGAGGGCGGCGCCACGACGGCGGCGGCGGCGGCCGTAGTGGGGAAGCACGGCGGAGGCGCGGGGAGCCCGGAACCCTGCCGACGACGGCGAGCCCGTAGCCCTTGAGCCCGACGAACTTTGCTACCTGGGCGCCGATGCCGTACTCGCGGGAGTCGACAGCGAGGCCGAGCTCGAC | |||||||||
gi|86501448|gb|CI144081.1|CI144081 CI144081 Oryza sativa (japonica cultivar-group) mixed shoot (Normalized Library) Oryza sativa TGATGGACCTTCGGTGTACTT EST sequence (targeted fragment marked with yellow): GTAACTATTTATTTCAAGAGTTCGTAACTACCTACAAACTTTGTCAAGTAGGGTAAAACCATTTTAGTCAGTTAGCTAGACCTTATTGGAAAAAGTACACCTAAGGTCCCTCAACTTGTCGGCGAGTTACAAAATCGTCCCTAAACCGATATATAACATATCTCAACTTACAAAACCGTTTGCTTTAGGTCCTTCGGTGATTTTGATCCCGGTTTTGTCTGATATGGCGGCTGAGTCAGAGTGGGCCTCACATGTCAGTATGCCACGTCATCACCTCCTCTCTCTCTCTCTCTCACTTTTCTCCTCTGTTGGCTGGCCGACGTGTCGGAGGAGGTCGTTGGGCGAAGACGGGCGACGGCTGGGGAAGACCGGAGGCGCACGGCCGGCCGACGGACGCTCGTCGCCGTCATCGCCGTGGCCGCTGGACGCCGGCGCCGACGTGGAAGCGGTCCCCGAGCTCACTGGCTTGGACCCCAGCGGTGGTGAGGTGAGCGAGGATGCGCGGGGTGGTGGGGGCGGCCTCGGATGCAGAGGCGACGGAGGCGGCGGGCGGCGGTCGACGTCGACCATCTGGAGGCGGAGGCGCGCCGGTGCCTCTC | |||||||||
gi|86495493|gb|CI138126.1|CI138126 CI138126 Oryza sativa (japonica cultivar-group) mixed callus (Normalized Library) Oryza sativ TGATGGACCTTCGGTGTACTT EST sequence (targeted fragment marked with yellow): AATATTAATAATACGTTAATGTTTTTCTATCCGTAATCTTCATCTTCAAACGGAGTCACTCACATAATCACATTACATGCTCACATGGCAATGGCATCCAAAGCAGAACACTAGACAGGTCGAGTTCTACCGCTTACCCGTGAGGCCGCAGCAAGGCGTAGGCATGGGCTTCTCTGCCAACACGACAAAGGCCTCATTTGGATGGTCCTCTATTGGGAAAAGTACACGCAAGGTCCCTCAACTTGTCAGCGAGATACAAAATCGTCCTCGAACCGCAAAACCGGACTCCGGCGTCCCCCAACTTACAAAACCGGTTACAAAAGGTCCCTAGGCGGTTTTGACTCCAGTTTTGTCCCACGTGGCGGCTGGCTCAGCGTGGGACCCACGTGGGCCCCACAGGTCATGGAGACCACGTCAGCACCCTCTCTCTTTTTCTCCTCTCTCTCTCCTTCCTTCCTCTCGCTCTCTGCTCTCGCACAGGCGGCGGCGTGCGTGGCCGGAGGGTGGTGCGGCCGGCGACGGCGGCTCCCCGGTGGCGGCGCGCGGGCTCAAGGCGGCGCGAGCTCGCCGGCCTCCTCGTCCCCCTCGTGCGGTCGGTGATGGCGGACGAGCGACGAGAAGCAGGCGGTGCGACGCCCCCGCCGCGTACAGTGGCACGGTGACCGTGGCCACTATCGCCTATCAGAGG | |||||||||
gi|33806370|gb|CF329066.1|CF329066 NACL--04-E02.g1 Rice callus plasmid cDNA library (NACL) Oryza sativa Japonica Group cDNA clon TGATGGACCTTCGGTGTACTT EST sequence (targeted fragment marked with yellow): AAATGTGTCCGGGGTTGTTGGGTGCCCTGGACCCTGTTGTCACTTTGGTCCAATTCTGAAAGGGAAAAGTACACCGAAGGTCCCTCAAAAAAAAAAAAAAAAAAAAAAAGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA | |||||||||