miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse




mature miRNA: TGTTTGGGGGAGTTTCTAGCT
species: Oryza sativa
database: miRNEST
The numbers on the right side of the alignments show a score calculated for them.
When calculating the score, a mismatch is given a score of 1, bulge: 2, and wobble: 0.5.

Predicted miRNA targets
gi|44669699|gb|CR283133.1|CR283133 CR283133 Oryza sativa library (Han B) Oryza sativa cDNA clone y808d11p3, mRNA sequence

TGTTTGGGGGAGTTTCTAGCT
..||.||||||||||||| ||
GTAAGCCCCCTCAAAGAT-GA

EST sequence (targeted fragment marked with yellow):
TTTTTTTTTTTTTTTTTTTTTTTCTGGAGCAATACCATTACAGGTAGAACTTTATTAATAAAGACAAAATTATTCTTGTAGTATGATGCTAGTACTACACGTATGTACTACTATAGTATATATGGAGAGATATGTCATGGTACACACAGTGACAGTGGCAGAATGTCCAATTTCTCCACAGAGACGACCAAAGGGATAGATGGGAATATACACGCACATTCCACAGGCACGGAATGAAAGAAAAGAGAAGGAAAAGAGGAAAGGCAGAAGAAACTGCAGGCGGGCAGCAAGATAGGAATCTCATCAAAAACAAAAGAGCAAAAGAATGGTGGGCGAACGAAAAGAATGTAGCAACAACCAACTTTGCTCCTTCCAGCACTTATCAGTTGTTCTTCTTCTCTTGCGCGCATTATTTGAGCGCGAATGATTGCGTTGGCTCGCCGGGCGGATGGCTGCCTGTCTGCGTCTGCGTCTAACACCGCCCGGGACTGGACTGGACCTCGCGCGCGCGCCTTGTGACTCTCGCAAGTAGAAACTCCCCCGAATGTCATGATGCTCTGGTGCACGTACTTGGTCCCGACGACGATGGACTGGCGCCAGCAGGACAGGGAAGCACGGACGAACGGGCTCAAACAAGACGCCGACCTGCAGGTACCCGTGGCGACGCTGAGGGACGACGGAGACGCAGCGGAAACGGAGGCGAAGAGACGCCAACCAAGGACCCGGAAAGGGTCACAACCGCACAAATACAAAACACAAAAGAGACGAGGGCCACCACCACCGCCCCACCTCTGAGGTCCCCAAGATTCGCACAGCGAGAAGATTAGAACCAACAACAAAAGAACACCGAGGCAACACAGACTGAACAG



gi|44665600|gb|CR279034.1|CR279034 CR279034 Oryza sativa library (Han B) Oryza sativa cDNA clone y667g01p3, mRNA sequence

TGTTTGGGGGAGTTTCTAGCT
||||| |||||||.||||| |
ACAAAGCCCCTCAGAGATCAA

EST sequence (targeted fragment marked with yellow):
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTTTTTTTTTAGAAAATAATTGATGTGATAATTAGCATTTCATAGTGATAAGTATTTTGGAACAAAATTGAAATTCTAAAGAGACAAGTATTTTGGTAATGAGATAGTAAAAATTATTATATTTTGGCATGGAAATTAATAGCAGTTACAATTAATTAGTAGTGCATTAATTATGAAGGTACTAGGCAAGGATGTCATGTTGATGATGGGGAAGGACGTTGTCCACTAGTACGGGTACGGCGGGCTGGCCGTCGTCGAGGTCGAGGAGGAAGCAGCTGCAGCAATGGTGCTCGAAGGTGTCGGCGGCGGGTTGCGGCAACGAGAGCAGGACGGTGACGGCGTTGGGGTCGGCGAGGACGGGGAGGAAGACGCAGTAAATCTCGCTGGTGAGGGGGGCCATGTGCGCCGCCCTCCCCTTGCCGAAGTCGACGTCCTCCAGGCCCAGCCGTGTCCAAGCCCAGATGACCAGCGTTCCACCCAAGTTCAGGATGGATCCCCCGCCCACTCTTCACGATATCCAAGTATATAGAATTTAATCATCTACAATCATCCTTATTTCTTTAACACCTACCACGCATAAAGCCAATTCCGGTAAAAAACTAGAGACTCCCCGAAACAAAACATTCCACTCTACGTCCATATAACAGATCATCGCAATATAGACAGTCAAACAATTCATACCGCACAAAACAACACACCACACCACCATGCATATAATATACTCAAATATCTACTAAACATCAATCTCTATTTATCATGG



gi|117236193|gb|CT849163.1|CT849163 CT849163 Oryza sativa (indica cultivar-group) cv. Guang Lu Ai 4 Oryza sativa Indica Group cD

TGTTTGGGGGAGTTTCTAGCT
|||||||| |||.|||||. |
ACAAACCCACTCGAAGATTAA

EST sequence (targeted fragment marked with yellow):
ACAGCAGCAGCAGCAGCTAATTAAGACTGTGATCTGATCCTGTCTGATGCTGATGAGCAAAGCCCAGGCTGGGCAGGCAGGCAGCCTCACGTGTGTGTGGGTGTGTGGGCGCGCCGTCATAATTTGCAGCGGCTGTCTCCGGCGACGTCGACCGCCGGCGAGCCACGGCCGTCCGCGTCGCTGTCGGCACAGCCGTCGGTATCGAGTGCGTGCGCGTGGGGCGCGCGCTGCACTGGCCGCGGTCCCGGCCGGCCGCCGCCGTTGGCTGGCTGCACCGGTCGCCCTCCGAGGAGACACAATACGACAGAGAACTCAGGTCAGGCATTTTACATTTTTACCAAAGCATATATTTTCTTTAATAGTTATGAGAATTTTTAATTTGCTGTAGGGATTCATATCCTGCTCGTCGTATCCCAGATTCCCAGCTTGATCTGGCATTTCGTGAGAGCTGAAATTAACCTGGAAAGCAAGGAGGATACTGATGACTCTGCAGTTGGCAAAGCAGAGGATCCTGAATTCCCGATCCTATGTAACATCCAAAATTAGAAGCTCACCCAAACAGTTTAGCTTCCGATTCAAATTTTAAGAAGCTGTAGTTGTATAATACAGAAAATGAACTAGAAGCCAGAAACTGGGAAACTCAGTTTTTCCACATTCTTGAAGCTGGCTACCAATTAGCTGTTTCTCAGAATTTTAAACTCTCCAAACAAAACCGATGTTTAGATTTAAAATAGTCGGATATATGTGTTACAAGTTAAATCGTGTGAGAAAAAAAAAGTAAGTCAGAGTAACATTTCTATTTTCTAGTAATGACTAATCCAAATTCAAACTAGAAAGGGATAGCAAGGTTATATATTTTCATGCTGTCAAGTCAGAAAATGACTTTTGAAATTTGCTGATTATCCAGCCATCAGCAAGGCAACAACTATAGGTGATGAGTAAAAACCATATCTATCACCTTAAGAAAAAGGAACCGTCGGCATCAAGAAGAATGGTACAGATTGCTAGTGCTGTCATTAGAATTTAAAACGTCTCG



gi|29618107|gb|CB623119.1|CB623119 OSIIEa10K04.f OSIIEa Oryza sativa Indica Group cDNA clone OSIIEa10K04 5', mRNA sequence

TGTTTGGGGGAGTTTCTAGCT
|||||||.||||. ||. |||
ACAAACCTCCTCGTAGGACGA

EST sequence (targeted fragment marked with yellow):
CTCATTGCTAGGCAGAGATAAACGTATATATCTTTGGTTAATTGTTAGTTTAGCGATGGCCAAAGCAACTTGCATTTCCTTGCTTGTGGTCGTGGCTCTGGCCACCGCGGCGTCGGCGCAGCTGTCGGCGACGTTCTACGACACGTCGTGCCCCAGAGCCATGTCCATCATCAAGAGCGCCGTGACCGCCGCCGTGAACAGCGAACCCCGCATGGGCGCGTCGCTGCTCAGGCTGCACTTCCATGACTGTTTTGTCCAAGGTTGCGACGCGTCTGTTCTGTTGTCGGGAAACGAGCAGGATGCTCCTCCAAACAAGGATTCTCTTAGAGGCTACGGCGTCATCGACAGCATCAAGGCGCAGATAGAGGCCGTGTGCAATCAGACCGTCTCATGCGCCGACATCCTTACCGTCGCCGCCCGTGACTCCGTCGTCGCTCTGGGAGGGCCAACGTGGACTGTCCCGCTGGGGAGAAGGGACTCTACAGGTGCAAGCGCGGCGCTCGCGATCAGCGACCTCCCTCCTTTTACCGCTAGCCTCCAAGAACTCGTAGACGCATTCGCCAAGAAGGGCCTTAGCGTAACCGACATGGTTGCTCTCTCAGGCGCGCACACGATCGGGCAGGCGCAGTGCTCAACCTTCAGGGGCAGGATCTACAACGAGACCAACATCGACTCGGCCTTCGCGACGCAACGCCAGGCCAACTGCCCACGGACATCCGGCGACATGAACCTGGCGCCGCTGGACACGACGACGGCGAACGCGTTCGACAACGCCTACTACACCAACCTGCTGTCGAACAGGGCCTCCTGCACTCGGA



gi|88908501|gb|CI713060.1|CI713060 CI713060 Oryza sativa (japonica cultivar-group) 2 nuclei stage pistil Oryza sativa Japonica G

TGTTTGGGGGAGTTTCTAGCT
||.||||||||| || ||| |
ACGAACCCCCTCCAACATCAA

EST sequence (targeted fragment marked with yellow):
GGGAGGAGAGGAGGGGAGGGGAGGGGAGGTGAGGGACGGAGCTGGTGGGTATGACGTCCGGGGCGGCGGCGGCGGGGAGGACGCCGACGTGGAAGGAGAGGGAGAACAACAAGAGGCGGGAGCGGCGGCGGCGTGCCATCGCCGCCAAGATCTTCACGGGGCTCCGGGCGCTCGGGAACTACAACCTCCCCCAAGCACTGCGAAAACAACGAGGTGCTCAAGGCGCTCTGCCGCGAGGCCGGCTGGGTTGTCGAGGACGANGGCACCACCTACCGCAAGGGATGTAAGCCGNCGCNATCGTCGGCTGGGGGAGCGTCGGTGGGGATGAGCCCCTGCTCGTNAACGCAGCTGATGAGCGCGCCGCCGTCCTCCCTCCCGAA



gi|86488767|gb|CI131400.1|CI131400 CI131400 Oryza sativa (japonica cultivar-group) Panicles less than 5cm stage and Panicles two

TGTTTGGGGGAGTTTCTAGCT
|||| ||||||.|||||.|.
CCAAAACCCCTCGAAGATTGG

EST sequence (targeted fragment marked with yellow):
CATTCAGAATATACAATTGGCCAATGGTGGGGGTTAGAAGCTCCCCAAAACCCATAATTTCCCCTCATTTACAACCTCTCAAAAAATAGTGAAATATAATGGTAGAAAGAAGCATTCTCTGATGCATAATTTCTCCGATTTAATTTAATTCATACATTGAAGTGGTTCCTCAGTTTGACACTTGAATTTGGACCTTTGGTGGTTAGAAATCTACTCAGATGCGCTGCGATGCCGGCCAAGCAATCTGCCTTGTGCTGGGAGCAGTGAGCACTGCCATTCTGTTTGGCCCTCTCCAAGAATAAGCTCTCCGTCAACACCGCACCCATTGTGGGTTTTGCCAATTGGCCTGACCTTAACATGTTTTACCTTGACATATTCCACATAAGGCAGAAGAAGATGCCAGCAAAACTGATAGGCGATAAAGAAGCAGAATAATCTGAGTCTTCCACTTCCATGGACAAGAATCAAGTCTAGACTGCCGTCATTATGCTGAGCTTTTGGCGCGATAACCGGTGAGAGTAATCCCTGTGCAGGCTTGCAGAAATGATTG



gi|44665774|gb|CR279208.1|CR279208 CR279208 Oryza sativa library (Han B) Oryza sativa cDNA clone y707a07p5, mRNA sequence

TGTTTGGGGGAGTTTCTAGCT
||.||||||||||.||| | .
ACGAACCCCCTCAGAGAGCCG

EST sequence (targeted fragment marked with yellow):
NGCCATTATGGCCGGGCGAGGTGCGGTGAAGAATGCAAGCANTCTCTGTGAGCGGTGATGGCGCAGCAGTGGCGATCTCTCCTCTTTCTCCTCCTCCTCCTCCTCGTGCCCTTCGCCGCCGCCGCCGGGCAGGATGCGCCGTTCGTGGTAGCACAGAAGAAGGTTGCGCTGTCCCGCCCGGGTCCAGGCGTGGAGCGCCTCGCCGTCAGCCTCAACCTCTACAAGCAGTGGTTCCGTGAGCGGCTATGATGTTACCTTGAATGACGACTCTTGGACACAGTGAGGCTTATCAAAGTTATCTCTGGAACCAGATCACAGATTGTGCAAACACTTGATCCTGGTGCTACTTGATTGCGCAAACTTCATCTTGGAGACCAAAGTGCAGGGCAAGTCGCAGGGCTCTCCTGGCCTTCTCCCATACCCGTGGTCACACAAAGGCCCCCCTCTTGCACGCTACTCAGAGCCCAAGTACCACTTTGAATTCTTGCCGAGAGACTCCCCCAAGCACTCTGACAGGGACCAACACTCGTGGGACCACTGGGCCCTGGCTCGGAGATCCCTTGACGCGTACTACTACCCTGGTTCCAGCCGTCAACCTCGCTGCACGCACCCCACTACGTCAATTCTTGCCCACTCACGCAACTGGCACCAACACCCCCTCCTCCGCCCCTCACCCCGCCACCATGCCCCCTATGCTACACTCACACCACCCCTCCACCCTCACCCCCCCCCCCACAACCCGCTCTCTCTCAACCCCCACCACCACACTACAT



gi|66928537|gb|CX115385.1|CX115385 EI098L09 A normalized whole-life-cycle cDNA library of rice Oryza sativa Indica Group cDNA cl

TGTTTGGGGGAGTTTCTAGCT
||| ||||||||| | .||||
ACACACCCCCTCACACGTCGA

EST sequence (targeted fragment marked with yellow):
GCCACGCGTCGCGGACGCGTGGGCCCAAATCCTCCTGCTCACCTCACCTTATCTCAGCTCTCAGCACCTCTTCCTCCCTCCCCCAAGCTTCCCTCTAATGGCGTCCGCCAACGCCATCTCCACCGCCTCCCTCCTCCGCTCTTTCTCCTCCCAGGGGAGGGTGAGGAGGGCCAAGAATGGGCGGGCGCAGCGGCTAGTGGTGCGGGCGGACGCCAAGGACATCGCCTTCGACCAGAAATCCCGGGCGGCGCTCCAGGCCGGCGTCGAGAAGCTCGCCAACGCCGTTGGCGTCACCCTCGGCCCACGAGGGAGAAACGTAGTGCTTGATGAGTACGGCAGTCCCAAAGTGGTAAATGATGGAGTCACCATTGCCCGGGCTATTGAGCTATATGATCCGATGGAAAATGCTGGTGCAGCATTGATCCGTGAGGTTGCTAGCAAGACCAATGATTCTGCTGGTGATGGGACTACAANCGCCTCTGTCCTTGCTCGTGAAATCATCAAGCTGGGCCTTTTGAGTGTAACTTCTGGTGCAAACCCTGTATTCACTTAAGAAAGGAATAGACAAAACAGTGCATGGTCTTATTGAAGAGCTGGAGAAGAAGGTAAGACAGTCACGGCAGGGGGGATATCAAGTGGGGCTCTATCTTGGGGGCAAATGACTTTGGGTCATGATGGGGCAGCATGACAAGGGGTCCGAGGGTCTTCATGAGTTTACATTTCGAAACGTGTTTACAGGAGGGAAGCGGGAAATCCCATGGAACTCAACCCCCCGAAGCGCTCGCCCCCCCAGACCTGAACAGGCGTTGACACGAGTACAGTACCGGGTGCCGGAAAGAACCCCGCACCACGCACACCCACGCCCCCCCCCCCCACACCACCACCCCCACTACACACACACCCACGCAACACCCCACAACCGCCAAACGGCCCCGCATGGCCACGCGCAAGAGCTGCACACTCCCCCACACACCCACGCCCACCACACGCCGCA



gi|88838111|gb|CI372679.1|CI372679 CI372679 Oryza sativa (japonica cultivar-group) callus Oryza sativa Japonica Group cDNA clone

TGTTTGGGGGAGTTTCTAGCT
||||||..||||||||.|. |
ACAAACTTCCTCAAAGGTTCA

EST sequence (targeted fragment marked with yellow):
AACATCATAAATTAGATTTGCATTACCAATTTGATAATTAAACAGACACCTAGTGATAATTTACAAATGTTTAAGAAACCCATAATTTTCTCATCTAAGATGAAAAGTAAACCTTATGGAACAATGCCACCAAACACATAATTGGCATCACCAGTGTTCAGATATCCACCATAGCAGCAAGAATGACACCAAAATCACAGCTATAGAAGCATAGTGACTATAATGAACTAATAATCACTTGGAAACTCCTTCAAACAGGTGCTGGATTCGTGCTTCGAGATCTTTTTGGGGAATGCTTGATGAACAAGTCTGTGCAGCTTCCGGAGATGATTTCAACCTTGAAATCAAGCCCATATATGCAGACTTCAAAGAATCTTGTTATTTGCTGCCCTAACATCCTCGCGCAGCTGCTCATCTG



gi|58658010|gb|CK046690.1|CK046690 47090rsiceh_8202.y1 Oryza sativa cv. PA64s panicle ferile cDNA library Oryza sativa Indica Gr

TGTTTGGGGGAGTTTCTAGCT
|||||||||||.|||| ||
CCAAACCCCCTCGAAGAACGC

EST sequence (targeted fragment marked with yellow):
GCACGAGGGGCGACTCGGAAAGGGGATCTCCGGCGACGTCTCGCGGATCTCCGGTACGCGCCGGCGAGCCTTCTCCTGCTCCCTTCTTCATCTGTTTCCCTATCGTCCGATGAGCTCTTGCTCCCCATTTGCAGGTTGCGCTTCTTGGCGACATGGCGAAGGGATCCAAGAAGAAGAAGGGATCCAGTGCGACGAGGAATCCGGCGGCCGAGCTCACCGACGACCTCATCGTGGAGATCCTCTCCCGCCTCCCCGCCAAGTCGGTCCACCGATGCAGGCGCGTATGCAGGCGGTGGCGCCGCCTCATCTCCGATCCCCACCACCGCAAGAAGCTCCCCCAAACCCTCGCCGGCTTCTTCCACCTCAGCGTGAACGAATCACGCTTTCCCGTGGAAGCACGCCATTTCGTCAATGTCTCCGGGATAGGGGGACGCCTGCCTCACGTCTGCCCATCCTTCTCCTTCCTGCCTCGCTTTGAGCGCATCAGTATGGTGGACAGCTGCGGCGGCCTCCTCCTCTGCCAATGCTTCGAGAGCTCAGATGCATTCCGCTACGTCGTGTTCAATCCTTGTACTGAGGAATGGATCGTCTTGCCGGAGTCCGGCTTCCACCCCAAGGACCGGGGGTTCTGCGCCCGCTTGGGATTTGACCCTGATGTCTCCTCGCAATTCCATGTCT



gi|86874310|gb|CI335922.1|CI335922 CI335922 Oryza sativa (japonica cultivar-group) shoot Oryza sativa Japonica Group cDNA clone

TGTTTGGGGGAGTTTCTAGCT
|.|||.||||||||||| |||
ATAAATCCCCTCAAAGA-CGA

EST sequence (targeted fragment marked with yellow):
GCTGCAAGTGCAACCAAGCTGTACTTTACTCTGAAGGGAAAGCAGAAACTCCCCTAAATATAATGGACGCGTCATTTACACATGTTAATACACCATCTGATGACTGTAAAACCCACAGGTAAAGTAGGTCTAAAATGGCGCAAAATTTGCATGCAAGGTTCATTACAGAAAAAATTGGGAGCTAAAATAGGGGCCTGAAAGTTACATCATGCACGGTGATTTTCATTTCCAGGAGACAACAGTTCAGTGATTAGGCATTACTTTTACAAAAGCCAGCAGTCATCGAGTGCTAAGATTCATCGATGATGGCTTCCAAAGAACTAGTGCTTTCATTTTTCCTTTCTTGCTGAATACATCATATTACAGTAATTAACAAAGAAATGAAGAAAATTGGATGGAGTCAAGGGCTGTCATGAGGCGC



gi|117232906|gb|CT854824.1|CT854824 CT854824 Oryza sativa (indica cultivar-group) cv. Guang Lu Ai 4 Oryza sativa Indica Group cD

TGTTTGGGGGAGTTTCTAGCT
|| ||||||||| ||||||||
ACTAACCCCCTCTAAGATCGA

EST sequence (targeted fragment marked with yellow):
TGGAACAAGCAAGGAGGATTTCCCACGGCTTCGTTGTCTCTCTGTCACTATATGCCCAAAACTAAGTAATTTGCAGCGACTAATGACACAGCAACTCAGGTGTTGCAGTACCTCATACCCAATTCAAATCTGGAGGAGCTCATCATGAAAGGTTATAATGGATCATCATTCCCATCATGGGTACGGTCTCTACCTTTGGACAGGTTACCTTCAATAGAACTCAAAGACTGACAAAATTGCGAATAACTACCACCTCCTGGAAGATTCCCATCCCTGAAACATGATGTGATACAGTCACTACCAAGTGTCAAACTAGTTGGGCCTGAATTTCTTGGCAATGCTGGCGATACTAATTACTTTTTTTTTTGACAAGAAACAGCAAGATAGGCTCCTACTGTGTTATATACTCCCTCCGTTTCGTAACGTTAGACGCACCAAAAGCTGGACTGTTTGGGGAGAGCTTCTGATTCTGGAAGAAGCTGCAGCAGCTGGACTGTTTGGGGGGAGCTCTAATTCTGGAAAAACCTGCAGCAGCTAGAATCTCCCCCAATCAGGCCCTATTACTCCTTGTCTTAAGCCAAGCACACGCCCATTTGATGAGAATACTTTCACGAGTTCTACGAGTATACTAACTTTTCTTCTTCCTTTCTGAGGCATCTCAACAAACTCTCCACTTGTGATTCATGCTTGGTCCCACTGCCCAACCACCACCACACTACTATGTTGTATCTCCTCATCTTGCTCTTGATCTTTGCCCCCCTCAACATCTCCGACCAGGGAAACCAGTGGAACAACGCCAGTTCTAATCCCCCTATCCAAAGTCCTCAATCTTCGCGGCCGCACCGACGCACCTACCAACCGACAGCACCTTTGAGGCCAAACCTTTTCTAGAATGTTAGCTGAATTCGGGGCAAACCCCTAGCCTTCCGATGTCTTCCCCCGTTTGTCCCTTGGGGGCCCCCCCAAAACCCGTTTTACCGGCCTTACCCCTCTAACCGGGGGGGACCCCAACGGTTTTTGGAACCTCTCTTTGTTACCCCTTCCCTCAAACACCTTTGGGGAGAACCTAAAAAAATATGGGTGGGGTGGCCCGAAAAAAAGAGATAAGTAGAATGTTATAACAAGGGCACAACAAATGAAACAACTTTTGTTGTTATTTCCCTTATTAAGAAATCATTTTTTGTTTTTTCTTTTTTCTGCTCTATACTATAATTATTATTACCCAGAAACGACACAACGTGTTGGGCAGCGGTGAGACTGGACAGGAAAGTGATAATTAAAAAGACAACCCACAAAAAT



gi|88383957|gb|CI631847.1|CI631847 CI631847 Oryza sativa (japonica cultivar-group) callus 2ppm BAP Oryza sativa Japonica Group c

TGTTTGGGGGAGTTTCTAGCT
|||||||||||.|||| ||
CCAAACCCCCTCGAAGAACGC

EST sequence (targeted fragment marked with yellow):
GGTCTGCCACGCCTTCTTGAACAGTTTCCCCAATTTTCTGACCGCCGCTTTGTTTGCAGCTCGCGCTTCCTGTCGACATGGCGAAGAAATCCAAGCTGAAGAAGGAGGGATCCAGTACGACGAGGAATCCGGCGGCCGAGCTCACCGACGACCTCATCGTCGACATCCTCTCCCGCCTCCCCGCAAGTCGGTCTGCCGATGCAAGTGCGTATCCAGGCGGTGGCGCGGCCTCATCTCCGANCCCGACCACCGCAAGAAGCTCCCCCAAACCCTCGCCGGCTTCTTCTACCGCAGCCGAGAACGACATCACGNCTGCCCCCAACCCTAGCGCGCCNATTTNGTCAACTGCTCACCGGNCAGAGGCCGA



gi|86870103|gb|CI318022.1|CI318022 CI318022 Oryza sativa (japonica cultivar-group) shoot Oryza sativa Japonica Group cDNA clone

TGTTTGGGGGAGTTTCTAGCT
|.|||.||||||||||| |||
ATAAATCCCCTCAAAGA-CGA

EST sequence (targeted fragment marked with yellow):
GGTGCATGTGCAACCAAGGTGTTTTTTACTCTGAGGGGAAAGCAGAAACTCCCCTAAATATTGTGGACGCGTTATTTACATGTGTTTATACACCATCTGTGTGATGTGTAAAACCCAGAGGTAAAGTAGGTTTAAAATGGGGCAAATTTTGTTGCAAGGTTCTTTACAGAAAAATTTGGGAGTTAAATATAGGGGCTTGAAAGTTATTCTTGCAGGGGGATTTTCTTTTCCAGGAGACAACGGTTAAGGGTTTAGGGTTTATTTTTACAAAAGCCAGCAGTCTTCGATTGTTAAAATTCTTCGATGATGGTTTCCAAAGAATTATTGTTTTCTTTTTTCTTTTTTTGCTGATTACTTCTTTTTAAGGTATTTAACAAAAAAATGAAAAAATTTGGTTGGGTCAGGGGCTGTATGAGGGCACTATGAGCGCAAAAATATGGTATGCAATGGCCAGTGGCCCACATTTTTGTTGG



gi|88242397|gb|CI242246.1|CI242246 CI242246 Oryza sativa (japonica cultivar-group) Shoot and root of germinating seeds Oryza sat

TGTTTGGGGGAGTTTCTAGCT
||||||||||||||| |||||
ACAAACCCCCTCAAAAATCGA

EST sequence (targeted fragment marked with yellow):
TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAAAAAACTGGGTTTCCCAGCTTCTAGCTTTTTATTTTCTGGATTCTACAACTACAGCTTCTTATAATTTAGACCAAAAGCTAGACTGTTTAGGGGAGCTTCTGATTCTGGGAGAAGCTGCAGTAGCTAAAAACTCCCCCAAACAGGCCCTAAGAATAAGTAGAATTTAGCTTGTTTTTCGTATTCTCACCCGATGGCTCTCAAATTTCCCAAACAAAACGGCATTCCAATCACACGAATGGCAGTGACTACCTTGTAACATCAAGGTTACAACAAATAACTAAACGTCTAAACCGTGTATACTGCCGGGCTTGGGGGACGCTGTCGCGGTGCAGGTTGGCCATCATCGTGTCCTGCCAACGGCGGAGCAACAGCAACCGGCCGCCACTTCGGCGGCGGCGCGCCACCTCCGCCGTGTTGATGCGGCGCTGGGTGCTTCGGCGACGGCGGGATGTACGGCGACGGCCTCACCAGCGCACCACCGTCATCCGTGCTGACGCTGCTCCGCCACGCCGACGCACGAAGATTTGGATGGG



gi|88397866|gb|CI583184.1|CI583184 CI583184 Oryza sativa (japonica cultivar-group) shoot Oryza sativa Japonica Group cDNA clone

TGTTTGGGGGAGTTTCTAGCT
|||||||||||.|||| ||
CCAAACCCCCTCGAAGAACGC

EST sequence (targeted fragment marked with yellow):
GGTCTGCCACGCCTTCTTGAACAGTTTCCCCAATTTTCTGACCGCCGCTTTGTTTGCAGCTCGCGCTTCCTGTCGACATGGCGAAGAAATCCAAGCTGAAGAAGGAGGGATCCAGTACGACGAGGAATCCGGCGGCCGAGCTCACCGACGACCTCATCGTCGACATCCTCTCCCGCCTCCCCGCAAGTCGGTCTGCCGATGCAAGTGCGTATCCAGGCGGTGGCGCGGCCTCATCTCCGACCCCGACCACCGCAAGAAGCTCCCCCAAACCCTCGCCGGCTTCTTCTACCGCAGCGAGAACGAATCACGCTGCCCCCAAGCTAGCGCGCCATTTCGTCAATGTCACCGGCAGAGGCCGGCCTCTCATCTGCCCAACCATCTCCTTCCTGCC



gi|88719375|gb|CI742885.1|CI742885 CI742885 Oryza sativa (japonica cultivar-group) library (Kikuchi S) Oryza sativa Japonica Gro

TGTTTGGGGGAGTTTCTAGCT
||||||||||||.|||||| |
ACAAACCCCCTCGAAGATCAA

EST sequence (targeted fragment marked with yellow):
GTTTTCAAACAAAAGATTTCATATTCCTTGTCTATGTACAAGACTTTGGGCCTGTTTGAGGGAGCTTAAAATTCGAAGAAGCAGTTGATTGGTAGCCAGCTTCTGAGAATCTGGAAAAGCTGGGTTTCCCAGCTTCTGGCTGCTAGTTCATTTTCTAGATTCTACAATTACAGCTTCTCAAATCTGGACCAAAAGCTAGACTGTTTTGGGGAGCTTCTGATTTTAGGAGTAGCTACAGCAACTAGAAGCTCCCCCAAACAGACGCTTTGGATCTTTTCTCCATGCGCGGTCTAATTCGAATTCCGCACTAGTACTACTCTTACTATGAATATGGCAGCATAACATAGGCGACGCAGACGATCCGATGTAGCCGCAAACTGCCGTACAAAG



gi|29656059|gb|CB652334.1|CB652334 OSJNEc02B20.r OSJNEc Oryza sativa Japonica Group cDNA clone OSJNEc02B20 3', mRNA sequence

TGTTTGGGGGAGTTTCTAGCT
|.||||.||||||||| ||||
ATAAACTCCCTCAAAG-TCGA

EST sequence (targeted fragment marked with yellow):
CCAATGCATTATGCAGGGCCAACTGAAGTGCAATGGCATGCTAAGGCTCGTATAAATGCTGGTGCAAACTTCTACATAGTTGGAAGAGATCCTGCTGGTATGGGCCACCCAACTGAAAAGAGGGCCCTGTATGATGCTGATCATGGGAAAAAGGTGTTGAGCATGGTTCCTGGGCTTGAGAAGCTCAATATCCTTCCTTTCAAGGTGGCTGCATATGACCCAAAGCAAAAGAAAATGGACTTTTTCGATCCATCAAGGAAAGATGATTTCCTGTTCATTTTTGGCACAAAGATGCGTATTTTTGCCAAGAATTGCCAGAGCCCCCCTGACGGATTCATGTGCCCGGGTGGCTGGAAGGTCCTTGTTGAATATTACGACAGCTTGACGCCATCAGCGGACAGCAGCAAATTGCGGGAGGCGGTTGCGGCCTAGAAAGCTGAAACTCCCTCAAATAAGCAAGACCATTGCATTTTGCAACTGTAAAATGGTTTTTTCAGAGAGAGAACCAATGGTATATGTGTATATTACTGGTCGCAAGGCCTAAACATTTGGGTTTGATTGGAAGCGCATTTTGGTGTGATTTGTATGTGCCCTATCATTTGGTAATGTTCCATTGGAAGCTCATCATGTTGTTGGTGTTAATAAGGATGAGCCTTTGTGTGTTTTGCTAGATATGTACATATACAATGTGGTGGTATTTATATAGTGCTTGGTGTGTTTGCTATTATGGAAGAGCAGGTTTCTTTTTTT



gi|89164150|gb|CI101238.1|CI101238 CI101238 Oryza sativa (japonica cultivar-group) Panicles one day after flowering Oryza sativa

TGTTTGGGGGAGTTTCTAGCT
|||| ||||||.|||||.|.
CCAAAACCCCTCGAAGATTGG

EST sequence (targeted fragment marked with yellow):
TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTCAGAATATACAATTGGCCAAGTGGTGGGGGTTAGAAGCTCCCCAAAACCCATAATTTCCCCTCATTTACAACCTCTCAAAAAATAGTGAAATATAATGGTAGAAAGAAGCATTCTCTGATGCATAATTTCTCCGATTTAATTTAATTCATACATTGAAGTGGTTCCTCAGTTTGACACTTGAATTTGGACCTTGGGTGGTTAGAAATCTACTCAGATGCGCTGCGATGCCGGCCAAGCAATCTGCCTTGTGCTGGGAGCAGTGAGCACTGCCATTCTGTTTGGCCCTCTCCAAGAATAAGCTCTCCGTCAACACCGCACCCATTGTGGGTTTGGCCAATGGGCCTGACCTTAACATGTTTTACCTTGACATATTCCACATAGGGCAGAAGAAGATGCCAGCAAAACTGATAGGCGATAAAGAAGCAGAATAATCTGAGTCTTCCACTTCCATGGACAAGAATCAAGT



gi|88726160|gb|CI749815.1|CI749815 CI749815 Oryza sativa (japonica cultivar-group) library (Kikuchi S) Oryza sativa Japonica Gro

TGTTTGGGGGAGTTTCTAGCT
|||||.|.|||||||||||||
ACAAATCTCCTCAAAGATCGA

EST sequence (targeted fragment marked with yellow):
TATATAATACCCGATGTGACACGCTAAAACTTTACAGCCCTGCATATAAACACTTCCTAAGATTATGAGAAACGGATAGTTGGTAATCAACTTTTAGAATGAGAAGATGAATTTTTCAGTTTCTAAGCTTCTAATTCATTCTATGAATTCTATGTAACTATAGATTCTAAGAATCAAAACTATTTAGTGGAGATGGGGATTTATGAGAAGATATAGCAGCTAGAAACTCCTCTAAACAACACTTTATATGAGCTTCTGAGAATCTAGATGTCTTGAGTTCGTTTTCTGAATTTTACAACTATAACTTCTCAAAATCAGGATAAAAAAAACTCAACTGCTTGAAGAATTAAAGCTGCAGTTGTCACAAACTCATTAAAAAACG



gi|89163968|gb|CI101056.1|CI101056 CI101056 Oryza sativa (japonica cultivar-group) Panicles one day after flowering Oryza sativa

TGTTTGGGGGAGTTTCTAGCT
||||||| |||||..|.||||
ACAAACCACCTCAGGGGTCGA

EST sequence (targeted fragment marked with yellow):
TTTGTCCAAAGTTCAGACAGTTGATTTATCTACAGAAGTGCTATAGATATGCCCAATACTTTTATGAAATTAGCGACAGTCACATATACTGTAGTAAGTTCAGAGACAACGGGGATGTGTACCGTAGCTTTCATCCTCCATTGGTTTATCTCAGCGAAGGGATTAACCACATGTACCTCTGTCCTTCCGGCCTGCGCCGGACAGCGTGAGGCTCTGGATGACCGTGGGCATGGGCGGGCTCAAGAGCTTCGACGAGCTCCTTCGTCCTGTTCTCCAGGTTGAATGCGCACAGGTTGCTGTAGGAGTCAATGAAGTAGACACAATTCGACTTCAGGTTGAGATGATCCTTCGCCCGGTAACAGACCGAGCTGTAGTAGCTGACAAACAGCGCAAAGTCCCCGATGTTATCAACCTTCTCCCAGGAAAATGTCCCCTTGTCCAGAATCCAGACCACAAACTTATCATTTGATTGCCGCTTCACCCTCATTAGATCACCAGCTGGGGACTCCACCAAACAGTTAAGCTTTCCATGTTGATGCGGATAGTGAAT



gi|86871133|gb|CI328335.1|CI328335 CI328335 Oryza sativa (japonica cultivar-group) shoot Oryza sativa Japonica Group cDNA clone

TGTTTGGGGGAGTTTCTAGCT
|||||.|||||||.|| ||.
TCAAACTCCCTCAAGGAACGG

EST sequence (targeted fragment marked with yellow):
GGCTTGCTACTAGTAGTACTTTATACAAGAAGATGGAGTAAATTACATACATATAGTTATAGGTGCCATTGATTGTCCGCTAGGAAACATAATCTCCATTCATATATGCTACAAAATTATTAGTAAAAAAGAGATGAGATGACCGTAAAATAACACATATGCCAGCATTGCTGGAGCTCAAGGCGTCGTCATTCCCATTGGGGCAGCCATATCCCAGTCTCTACCCATCATCCAGCCGGTGCTCTTCATGTCCTCTCCAGCTTCTTTACAGATTCGGTCCAGCCTGGGCAAGGAACTCCCTCAAACTGGCAAAAACTCTCGCCATGTGCCCTTCGTCGCCGCTGGTCAATTCACCATGGAAGTAATCAGTCACCTCCTTCACCCAAGACCGGCAGATGCTCTCTTGGCGCTGGAGCTTCAGGATCTCCTCCTCTGACTGCCTAAGGAACATGCTCATTGTGTTGTGGAACCGCCTGCGGCGTCGCTGAGGT



gi|117236027|gb|CT849081.1|CT849081 CT849081 Oryza sativa (indica cultivar-group) cv. Guang Lu Ai 4 Oryza sativa Indica Group cD

TGTTTGGGGGAGTTTCTAGCT
| ||||||||||||| || |.
AAAAACCCCCTCAAACATAGG

EST sequence (targeted fragment marked with yellow):
ATGAATTGATTCTTATATAATTGTACTTGCTAATGGATACAAACTCCCCCAAAAATAAGAAGCCTATCATCACCCGTCCCCTCACTGAGACCTAACAGATGGAAAGCATTCTTAATATCAATGATATTTCTGATATCGTCACTCCAGAATCTAACGAAGAAGAACAGAGAAAGATTCGCAAATTAGAAATGGATCTTCAAGAAGCACAAAAAGATGTGGAAGTGAGAGAGAAGCAAATTGAAAATCTTAAGAAGACACAGAAACATCTAGAGAGTCATCAGGAGTTACAGAAAAAGAAGATTGAATCTCTTCAAAAAAAGATTGATGCCTTGGAGAATGAAACAGCTAAAATGAGAGAGTCTCAAATCTCAGAAATTGTTGATACTGCTCCTCTTGAGGCTAAAATTAAAGAATTGGAGATTGAGTGCCAGAAATTACGACAAGAAAATTCTCGTTTAAAAAAAGATTTCGATAGTAAGGAGGTATCTGTTGTTGAAAAATCAAGGGAAGTTGACAAATATAAACTTAAAATTGAGGAACTCACCAAAAAAATAGAGGATAGTGAGACTAAGTTTAACAAAAAGATAAAGGAACTCTAAT



gi|88833494|gb|CI076975.1|CI076975 CI076975 Oryza sativa (japonica cultivar-group) NAA treated callus Oryza sativa Japonica Grou

TGTTTGGGGGAGTTTCTAGCT
||||||| |||||..|.||||
ACAAACCACCTCAGGGGTCGA

EST sequence (targeted fragment marked with yellow):
ATCACAAACCACGAGTTGTCCAAAGTTCAGACAGTTGATTTATCTACAGAAGTGCTATAGATATGCCCAATACTTTTATGAAATTAGCGACAGTCACATATACTGTAGTAAGTTCAGAGACAACGGGGATGTGTACCGTAGCTTTCATCCTCCATTGGTTTATCTCAGCGAAGGGATTAACCACATGTACCTCTGTCCTTCCGGCCTGCGCCGGACAGCGTGAGGCTCTGGATGACCGTGGGCATGGGCGGGCTCAAGAGCTTCGACGAGCTCCTTCGTCCTGTTCTCCAGGTTGAATGCGCACAGGTTGCTGTAGGAGTCAATGAAGTAGACACAATTCGACTTCAGGTTGAGATGATCCTTCGCCCGGTAACAGACCGAGCTGTAGTAGCTGACAAACAGCGCAAAGTCCCCGATGTTATCAACCTTCTCCCAGGAAAATGTCCCCTTGTCCAGAATCCAGACCACAAACTTATCATTTGATTGCCGCTTCACCCTCATTAGATCACCAGCTGGGGACTCCACCAAACA



gi|88696269|gb|CI739844.1|CI739844 CI739844 Oryza sativa (japonica cultivar-group) 1 day after pollination pistil Oryza sativa J

TGTTTGGGGGAGTTTCTAGCT
|||||||||||.|||| ||
CCAAACCCCCTCGAAGAACGC

EST sequence (targeted fragment marked with yellow):
GATGTTTGCCCTCCCCCTCTAAAACCCCAGCACCCAGAGCCGCCGGCGGCGGCGGCGACGGCGACTCGGAAAGGGGATCTCCGGCGACGTCTCGCGGATCTCCGGTTGCGCTTCTTGGCGACATGGCGAAGGGATCCAAGAAGAAGAAGGGATCCAGTGCGACGAGGAATCCGGCGGCCGAGCTCACCGACGACCTCATCGTGGAGATCCTCTCCCGCCTCCCCGCCAAGTCGGTCCGCCGATGCAGGCGCGTATGCAGGCGGTGGCGCCGCCTCATCTCCGATCCCCATCACCGCAAGAAGCTCCCCCAAACCCTCGCCGGCTTCTTCCACCTCAGCGTGAACGAATCACGCTTTCCCGTGGAAG



gi|86434815|gb|CI106048.1|CI106048 CI106048 Oryza sativa (japonica cultivar-group) Panicles less than 5cm stage Oryza sativa Jap

TGTTTGGGGGAGTTTCTAGCT
|.|||.||||||||||| |||
ATAAATCCCCTCAAAGA-CGA

EST sequence (targeted fragment marked with yellow):
TTTTTTTTTTTTGCTGCAAGTGCAACCAAGCTGTACTTTACTCTGAAGGGAAAGCAGAAACTCCCCTAAATATAAGGGACGCGTCATTTACACATGTTAATACACCATCTGATGACTGTAAAACCCACAGGTAAAGTAGGTCTAAAATGGTGCAAAATTTGCATGCAAGGTTCATTACAGAAAAAATTGGGAGCTAAAATAGGGGCCTGAAAGTTACATCATGCACGGTGATTTTCATTTCCAGGAGACAACAGTTCAGTGATTAGGCATTACTTTTACAAAAGCCAGCAGTCATCGAGTGCTAAGATTCATCGATGATGGCTTCCAAAGAACTAGTGCTTTCATTTTTCCTTTCTTGCTGAATACATCATATTACAGTAATTAACAAAGAAATGAAGAAAATTGGATGGAGTCAAGGGCTGTCATGAGGCGCACCTATGAGCGCAAAAATCATGGTATGCAATGCACCAAGTGGCACCACAATTTTTTGTTAGGGCTCTTGGCTGTTCACGCGTTTCTGAAGCTCCAGCATTTCTTGGTGATTTGGATC



gi|117237638|gb|CT855068.1|CT855068 CT855068 Oryza sativa (indica cultivar-group) cv. Guang Lu Ai 4 Oryza sativa Indica Group cD

TGTTTGGGGGAGTTTCTAGCT
|||||||||||| .|| |||
ACAAACCCCCTCTCGGACCGA

EST sequence (targeted fragment marked with yellow):
CGAGTCCTACGCGAAGTCGGACTCCGATTCTCAATAGGAGACGCGTGTGATTACAAATAAAAAGCCCGGCCCATTTGAGCCAGGCTCTCCCCCAAACACGAAACGATAGCGCGACGCGATGCGACGCGAGCGCGACGCGACGCAAATCCCGGAGAACCCTATGGAGGGGATCCCCCAGACCGCCGCGGCGGCGGCGGCGGCGGAGGCATCTGAGCCCCCGCGGAAGCGCGCCCGCGTCGACGGCGGCGGCGGCGGCGCAGGGGAGGAGGAGGACCGGCTGAGCGATCTGCCGGACTGCCTCCTGGAGGACATCCTGGCGCATGTCGGGTCCCGCCAGGCCGTGCAGACGACCGTGCTGTAGCGGCGGTGGCGGAACCTCTGGCGCGGTGTGCGGGTCGTGGTCATCGACGTGGGGTCGTTCCATCTTCTGGGCGCCGACGGACACCCGCCGCGGCTCTTCCTGGATCGTATAAAAGACTTCACGGACGGCGAGCTGTGGCCGCCGCTCCACCCGGGCGCCGAGCGGGAGCTGTACGCGCTCCTGATGCGCCTGGACTAGGCAACGGTGACCACGAGCTAACACAGGTGGAACCGAAGTTCATTGTGTCGCCGCCCATCCCCCTTTGACCAGTAGTAGTATTCCCGACGATGCTTGAACTGATCGCCCGTCCCAACAGTGGCCCCGGTTAATGGCGCAATGGGGACCACCATTCTGCGGTTCTTTAGGCTCCGGGGGCGGGGCGTTTTCCGGGCGGATGAACCGCTGGATTGGCAGGACCTGTACATCCGGATGTGTTGGTTCCATCCACGGTTCTTGGGCCCGGTCCCCCCGGTATCCCCTTTTCCTTTTTTTTACCGAGGGACCCTTTAAAGGTCCCCAAATAAGGGTCTTACGGGCTCCCCGCCCCCAAAAAGAACTTGTTTTGGGGGTGCGGGTCAAGGCGGGTAGACATGGGACAGGAAAAAACTGTTTATTCCCCCCCTTTGCACTCCCGGCCCCCCCTCCTTTGTTAAATCTGGTGCTCTCTCCTTCAAACCCCGGAAAAACCCCTTTATCCCCTTATTTGGGGCTAATTTTTTTGGGTTAATTCCAGGGTTTTTGTTCCCCTTCTTCCGCACTATAGGTAAAATAACAAAAATACACATGTATTATCAAAAAAAAATAATATTGCATAATATTTTTTAATACCACAAATATTTTTTTTTGTTGCGTTTTTTTCATATTCTTATCTTGGGTTGGGGCCAATCTTCTCTTTCTGTGTGTGTGGGCTATCAAAATATTCTGTTCGTTTCTTC



gi|86485159|gb|CI127792.1|CI127792 CI127792 Oryza sativa (japonica cultivar-group) Panicles more than 5cm stage and Panicles one

TGTTTGGGGGAGTTTCTAGCT
|||| ||||||.|||||.|.
CCAAAACCCCTCGAAGATTGG

EST sequence (targeted fragment marked with yellow):
TTTTAAAGTCAGAAGTAGAGATTTTTCTTCTTTTTTTTTCATTTCAGAATATACAATGGGCAATGGTGGGGGTTAGAAGCTCCCCAAAACCATAATTTCCCCTCATTTACAACCTCTCAAAAAATAGTGAAATATAATGGTAGAAAGAAGCATTCTCTGATGCATAATTTCTCCGATTTAATTTAATTCATACATTGAAGTGGTTCCTCAGTTTGACACTTGAATTTGGACCTTTGGTGGTTAGAAATCTACTCAGATGCGCTGCGATGCCGGCCAAGCAATCTGCCTTGTGCTGGGAGCAGTGAGCACTGCCATTCTGTTTGGCCCTCTCCAAGAATAAGCTCTCCGTCAACACCGCACCCATTGTGGGTTTTGCCAATAGGGCTGACCTTAACATGTTTTACCTTGACATATTCCACATAAGGCAGGAGAAGATGCCAGCAAAACTGA



gi|29683920|gb|CB680195.1|CB680195 OSJNEf04J14.f OSJNEf Oryza sativa Japonica Group cDNA clone OSJNEf04J14 5', mRNA sequence

TGTTTGGGGGAGTTTCTAGCT
|||||||||||| .| ||||
ACAAACCCCCTCCGACATCGC

EST sequence (targeted fragment marked with yellow):
CGCCGCCGCCGCCGCCGCCATGGCCACCTCCACCTCCGCCGCCACCGCGCCCCTCACCTGCCACCACCTCAGCCTCCGCCTCCGCCCTCGCCTCCCCTCCGTCTCCTTACCACAAGTCGAGCATCTTCCACCAGAAGCCTCCAGCACCAAGCCAGATGATGATGTTAACGATGGAAATGACAAATCCATACCCCCACCACTGAGCCAGTGGAACATAGCCAGCACCGTAGAAGACAGGAGCAGACCCAATTCCATAGTGCGTGAGTCCACCCATGATGTTTGAGAGGAATGAAAGAACCATGGCAGCAATTAGAGGAGGAGTGCCCAAGGCGCTGGACACTGACAAAAATGCAGTGAACATTGCTCCAATGTGCGCTGCGCCACTGGCAAAGAAATAGTGGGAGTAGAAGTACAGCAGCACCAAGACACCAAACGATAGTTGCCATGAGAGACCAAGGCCACCAACAAACTTCACAACAGTCTCACTGAACCAAGAGATCAACCCGTATTTGTTGAGGTATCCAGCCATTGCAATAAGAGCAGCAAACCATGTAAGGGTATCCCACGCTACAGCCTCCCCCAAACACTCTTTCCATGTAACAACTCCAGAAATCAGGAGGACGGATAGGCCAAGAATTGCAGCAGACACTGCATCCACATTCAGCATTCCACCAAAGATCCAAAGACCTACCGTGAGGAACAGCGTTCCAGCCATGATCTTCTCCTCCTTGCTCATA



gi|86838336|gb|CI327715.1|CI327715 CI327715 Oryza sativa (japonica cultivar-group) shoot Oryza sativa Japonica Group cDNA clone

TGTTTGGGGGAGTTTCTAGCT
|||| ||||||.|||||.|.
CCAAAACCCCTCGAAGATTGG

EST sequence (targeted fragment marked with yellow):
AAGCTTAAAATTACATTTGTTTCTGTGTTTCCATGTAAAGTCAGAAGTAGAGATTTTTCTTCTTTTTTTTTTCATTTCAGAATATACAATTGGCCAATGGTGGGGGTTAGAAGCTCCCCAAAACCCATAATTTCCCTCATTTACAACCTCTCAAAAAATAGTGAAATATAATGGTAGAAAGAAGCATTCTCTGATGCATAATTTCTCCGATTTAATTTAATTCATACATTGAAGTGGTTCTCAGTTTGACANTTGAATTTGGACCTTTGGTGGTTAGAAATCTACTCAGATGCGCTGCGATGCCGGCCAAGCAATCTGCCTTGTGCTGGGAGCAGTGAGCCCTGGCCATTCTGTTTGGCCCTCTCCAAGAATAAGCTCTCCGTCAACACCGCAACCCATTGTGGGTTTTGCAATTGGCCTGACTTAACATGTTTTAACTTGACATATTCAAATA



gi|86499274|gb|CI141907.1|CI141907 CI141907 Oryza sativa (japonica cultivar-group) mixed shoot (Normalized Library) Oryza sativa

TGTTTGGGGGAGTTTCTAGCT
|||||||.||||.|||||| |
ACAAACCTCCTCGAAGATCAA

EST sequence (targeted fragment marked with yellow):
TCTGAATTCCACAACAACATCTTCTTAGAATCTAAACCAAATAGCTAGACTGTTTAGGAGAGCTTTTGATTTTAGAAGAAGCTGCAGCAACTAGAAGCTCCTCCAAACAGACCCATATGCTCCGTACCACCACCAGATATATATAAAATATACTAGTAGGATTGAACGGAGCCAGGCATGCACGAGCACAAACCAACTGATAATCTAGCATTCTAGCTGAATTCCAGCGTAGAAGCAGGGATCTGCTGATAAGAGTTCAATATGATATTCTTCAGAAGGCCAAGATGGTGTGGCGTCAATCACATACACAGCGGATTAAGGCTCCGCAGGTAGACGACACCCTCATGCTATGGGGAAAAAAGATATATAGCCCCTAAATACAAACACGGATATGTCGTTTATGTTTACCGGGGCAACTACAAGGCTATTTACATAGGCTACTTCCAGGAAACGGTTAGAATCCGGGGGCATAATGAGTTGAGGATCCTATTTCAATAGCGAAATTATTACTCCCGTCTATCGACCACGCGAGGCTATCAACTTATAGCCTCAATGTGGTGTCTGCTGGAGCTCTAGAAGCCGCGGCTTTGGCCTTCTCAG



gi|109712298|gb|CI104906.1|CI104906 CI104906 Oryza sativa (japonica cultivar-group) Panicles one day after flowering Oryza sativ

TGTTTGGGGGAGTTTCTAGCT
|||| ||||||.|||||.|.
CCAAAACCCCTCGAAGATTGG

EST sequence (targeted fragment marked with yellow):
TTCATTTCAGAATATACAATTGGCCAATGGTGGGGGTTAGAAGCTCCCCAAAACCCATAATTTCCCCTCATTTACAACCTCTCAAAAAATAGTGAAATATAATGGTAGAAAGAAGCATTCTCTGATGCATAATTTCTCCGATTTAATTTAATGCATACATTGAAGTGGTTCCTCAGTTTGACACTTGAATTTGGACCTTTGGTGGTTAGAAATCTACTCAGATGCGCTGCGATGCCGGCCAAGCAATCTGCCTTGTGCTGGGAGCAGTGAGCACTGCCATTCTGTTTGGCCCTCTCCAAGAATAAGCTCTCCGTCAACACCGCACCCATTGTGGGTTTTGCCAATTGGCCTGACCTTAACATGTTTTACCTTGACATATTCCACATAAGGCAGAAGAAGATGCCAGCAAAACTGATAGGCGATAAAGAAGCAGAATAATCTGAGTCTTCC



gi|41881933|gb|BX927664.1|BX927664 BX927664 Oryza sativa library (Han B) Oryza sativa cDNA clone p633e05p3, mRNA sequence

TGTTTGGGGGAGTTTCTAGCT
|.|||||||||.|.||| ||
ATAAACCCCCTTAGAGACCGC

EST sequence (targeted fragment marked with yellow):
TTTTTTTTGAACTTAAAATGCACAATTGCATCCAGATTTATATTTCTCATCCTGGTAACATGAGCAAGCAATATACCACAGTTAAAAGCTGTTACCAAATTCTGTACAACTACTACTAATTTTTCTCTAACCAGTTCATATCATGCACACATTCAGCAGCACAAACACCGAGCAAGATAATTCAGCTAAAATTTCCCAATTATACCAATCATCCTAAACACAGTTTTGGAGGAAACTACAACAAAAGCTGCAAAATGATTTCTCCTAACTATTTCCTCCCAGGTTCTATCACAACGCCAGAGATTCCCCCAAATACTCCCAAAAAAAGTATCCTCACCTCCAAGCAGACACAGTAAGCAATGGGCGTATCTCCCATGCCAAGGACAAGAACGCCGGTGGCAACTCGACAAGTGAATACTTGTACTTGGAATCCATAGTTCCAGAGCAAAAGATCAGCCTGGCTCCTGAGATAGTTGCTGAGCGGCACGGGCTCTAAAGCGAACACTCATCAAGGGCTGCACACACTGGTACCGGCAACTCCCCAGACAGCTAGGACTTCACCGGGCCACAGGCCCTAAATCGCCCCGAAACCAGACAACTCACCCTCCGAAAAAGCAAAAGGAGATCAGGCACAAACAGGCACCACAAACACAACACACAGGAACAACACAACCACGCGCATACCACCACAAAATAC



gi|86874729|gb|CI318288.1|CI318288 CI318288 Oryza sativa (japonica cultivar-group) shoot Oryza sativa Japonica Group cDNA clone

TGTTTGGGGGAGTTTCTAGCT
|||| ||||||.|||||.|.
CCAAAACCCCTCGAAGATTGG

EST sequence (targeted fragment marked with yellow):
GGTGTAAGCTTAAAATTACATTTGCTTCTGTGTTTCCATGTAAAGTCAGAAGTAGAGATTTTTCTTCTTTTTTTTTTCATTTCAGAATATACAACTTGGCCAATGGTGGGGGTTAGAAGCTCCCCAAAACCCATAATTTCCCCTCATTTACAACCTCTCAAAAAATAGTGAAATATAATGGTAGAAAGAAGCATTCTCTGATGCATAATTTCTCCGATTTAATTTAATTCATACATTGAAGTGGTTCTCAGTTTTGACACTTGAATTTGGACCTTTGGTGGTTAGAAATCTACTCAGATGCGCTGCGATGCCGGCCAAGCAATCTGCCTTGTGCTGGGAGCAGTGAGCACTGCCATTCTGTTTGGCCCTCTCCAAGAATAAGCTCTCCGTCAACAACGAACCCATTGTGGGTTTTGCCAATTGGGCTGACCTTAACATGTTTTACCTTGAAATATTCCACATAAGGCACAAGAAGATGCCAGCAAAAGTGACTAGGCGATAAAGAAGCAGAA