| mature miRNA: TGTTTGGTTGGAGGGACTAAA species: Oryza sativa database: miRNEST The numbers on the right side of the alignments show a score calculated for them. When calculating the score, a mismatch is given a score of 1, bulge: 2, and wobble: 0.5. |
| Predicted miRNA targets | |||||||||
gi|88463200|gb|CI524510.1|CI524510 CI524510 Oryza sativa (japonica cultivar-group) 5 days after pollination pistil Oryza sativa TGTTTGGTTGGAGGGACTAAA EST sequence (targeted fragment marked with yellow): GCAGCAAACTCTGATCATATAGTACCCACACACCATGCATGCACACCAAAAATGTATATTAGGGGTGTTTGGGAACTAGGACTAAATTTAGTCTCTCTCACAAAAATATAAGTCTCTATAATAGGAACTTATATTTTTGTGAGAGGAACTAAAGTTTAGCCCCACTTTACCCCCTCCAACCAAACACCACCTTATTCTTCATCATACATACGTATACGTATACGTAGGTCTACCAGCGTACTATAGGTACAATACCACAATAATTATTGTCATCTTCATCGTCGTCGCTCTTACGGAATAAAGTATAATTCGATCGAATGCATGCAATATTTGCATCCATGGCGATCGATCTAAAGGAGGCCGCCTTTGCCGGAGTCGACCTTGAAGTAGCCGACGTGGAGAGCAGTCTGGTGGTGGTCCGACC | |||||||||
gi|86603694|gb|CI112454.1|CI112454 CI112454 Oryza sativa (japonica cultivar-group) Panicles two weeks after flowering Oryza sati TGTTTGGTTGGAGGGACTAAA EST sequence (targeted fragment marked with yellow): CTCACTTTGAGCCTGCATGAACCATGTACTGCAGTACTAGGGGGGTGTTTGGGAGAGATGGGCTAAACTTTAGCCCCTATAACTTATGTTTTCGAGAAAGGGGTTAAAGTTTAGCCCTACTTTAGTCCCTCCAACCAAACACCACTTAGGATATACATGCACCAGCTTATATTTCTTTAAATTTTTCCTATCTGAAGAAATGGGAGAGGTGTGGAACAAAAGCTCTGGAAAAAAAGGACAAAACGCTCGTCTGTTTTGGTGATGCATGCATGCTGGTGGTGGTGGTGGTGGTGGCGGGGGGCGTGTGATTGAGGAATTTGTCAACTAGCAGCGGCATGCACGCGTCGGCCGGGCGGGTGGTTTTCCAAGCACCGGCAGCCGAGCGATCTCATTCTCATCAGCAACACACACATGCATTTACTCCTTCTCCAGCTCTTCACCTAA | |||||||||
gi|29658712|gb|CB654987.1|CB654987 OSJNEc07P06.f OSJNEc Oryza sativa Japonica Group cDNA clone OSJNEc07P06 5', mRNA sequence TGTTTGGTTGGAGGGACTAAA EST sequence (targeted fragment marked with yellow): GCGACGAGCGCGCGCCCCTCTGAGAGAGAGGCGACGAGCTCGGCGGCCGGCGCGGGCGACGAGCGTGGCGGCCGGCGAGAGAGGCGACGACCTCGGCGGCTGGCGTGGGTGACGAGAGAGGAAGGCGGCGGCGGGAGGAGGCGAGCCTCGGTGGTGGGAGGAGGCGGCCGGCGGCGGGAGGAAGCCGGCGGGAGGAGGCTGCCAGCGGCGTCGGCGAGCCCAGATCTGGCGCTGCTTTTTTTTTCTTTTTCTTTTTTCTATGTGTATTTATAATGGAATGTGTATTTATAATGGAGTGTGTATTTATAATGGAATGTGTATTATGTATTAATTTGATGGGGTATATTCACCATCTCAAGTGAGAGGTGACCACACCTACAAATCCACCATACTTCCTCCAACCAAACAAAAAATTGGATCACCAAATCCACCTTTGTCTCTACAACCAAACAAAAAATTAGATCGCCATATTCACACAACCAAACAAAAATTGGACCGCCATATCCAGCAAAATATGGACCACCGTATCCCATCCAATCTTGACCAGGAACCAAACACACCCTTAGTGTTCTATACAAGCATGTTGACTGTTTGATAAAAAAATCACAATACTGACTGTGGTTTTTGAAAGAAGTTAGTGTTCTAGACAAGTACATCAGGGCTTCTGTCCTAGATCCCCATCCATTTGTGCCTATGAATCATGTTGCTTCTCAGAACAGATGGTAAATTCAATATGCAGATTTATT | |||||||||
gi|87028271|gb|CI111965.1|CI111965 CI111965 Oryza sativa (japonica cultivar-group) Panicles two weeks after flowering Oryza sati TGTTTGGTTGGAGGGACTAAA EST sequence (targeted fragment marked with yellow): TTTTTTTTGCATAAATAAAAATATATATTTAGACAAATGCATGTCAGAGCTAGCAAACGGAATACGCATATGCAGCACACTCTGATCATATAGTACCCACACACCATGCATGCACACCACAAATGTATATTAGGGGTGTTTGGGAACTAGGACTAAATTTAGTCTCTCTCACAAAAATATAAGTCTCTATAATAGGAACTTATATTTTTGTGAGAGGAACTAAAGTTTAGCCCCACTTTAGCCCCTCCAAACAAACACCACCTTATTCTTCATCCATACATACGTATACGTATACGTAGGTCTACCAGCGTACTATACGTACAATACCACAATAATTATGGTCATCTTCATCGTCGTCGCTCTTACGGAATACAGTATAATTCGATCGAATGCATGCAATATTTGCATCCATGGCGATCGATCTAGAGGAGGCCGCCTTGGCCGGAGTCGACCTTGAAGTAGCCGAGGTGGAGAGCAGTCTGGTGGTGGTCCGACGAGTACTGCGCCGCCGCCGC | |||||||||
gi|117244485|gb|CT849770.1|CT849770 CT849770 Oryza sativa (indica cultivar-group) cv. Guang Lu Ai 4 Oryza sativa Indica Group cD TGTTTGGTTGGAGGGACTAAA EST sequence (targeted fragment marked with yellow): GCATTATTTAAATGGACAACTAAGCTGAGTAATTCGGTATCGAAACTATTGCCTACGAGGAGTTGGAGACCTAGTTCCAGGAAGTACTGTCCAGCCTGAGTTCTGATCAGACTCTGGATCGCTTCCGAATCGAATATGAACGCATTCACCGTGCGCTGCGCCACTCCCACGAACAGGAAAAGAAACTGCTAGGCCGTTGCAGAGACCTTTCGAAGGACATCATCGCTGGAGCTGCCAAATTGCAGTCGGCCCTCAAGTTCTCCAACGATGACTCGCACACCATCTCGTATCTGAAGGCAGAAGTTGCCAAAACATACAAATATCTTGAGCTTTCTCGAGAGCACGAAGAGCTCTCCAAGCAAAAGATTGAAAGACTTAAGGCTGAAATGAAGAAGCTGCATATGCTCATGGAACAGAACGATTCTATTACTGAAGGACAGGTAGCCTCAGTTCACTAATACACCATAGCCAACGAAGAACTAGAAAAAGAGAAGGAGATCCTCCAAATTAGTCTCGACTCCAACAAAACCGAGCTCTCCGAAGTGAGGAGCAGAATCGAAGCAAGTGAATCCCAAAAAGAAGCCCTTAGGCGTTAATTTTAACAGTTGCAACTGCGCAAAGAGGCACAGGAGAAACGAGTGAAAGAGGAGGAGTAGAGCAAGAAGAGCAAGAAGGACGAGTTGGAGGTAATTAAAGCTCATTTCGACCGTGCGCGAGCTGAAGAAGGTACTGCCAAAGACTCACGCAAACAACTCAACGATAAATACAAGGAGCTCACAACTCAACTTACTAGTTATAAATCTTGGCTGAAAAGGAGCGCAAATTCCTGAAGAAACTGGAGAAAGAGTAAGCAGTTGAGACTAAGAAAATGCAGGAGATCTAGTAGATCAATGGCAACCTACGCTCCCTAATGCCCCTCAAAGAAAAGGAACTGACTGCCACACGTGAATCTCTTAACAAGGAAAAAGAGCAAGCCCACTGGACTCATAGCCCAATATGAACAAAAGAGGGAAGAAATCCGTTTAGCTTAATTACCCAAAGGGTAAAAATTTTGGCACCTTAAAAAAACAAATGGTTTAAGGGCTTCCTTCAATTTAAAAAATTCCTTTAACTAAAAAAAAAAAAAAATAAAGGGGGGGGAAAAACAAAAATTTTTTTTTTTTAGAAAAAAAATAAAAAAGAAAAATTCCGGGGGGCCATTTGTTCACCAAAAAAAGGAGGGAAAAGATAATTTAAAAGAAAAAAAAATAAGTTTTTTTTTCTTTCTCCAACCAAACACACCCAAACAAAAACAAAAAAGTATCCG | |||||||||
gi|88300818|gb|CI589810.1|CI589810 CI589810 Oryza sativa (japonica cultivar-group) flower Oryza sativa Japonica Group cDNA clone TGTTTGGTTGGAGGGACTAAA EST sequence (targeted fragment marked with yellow): GAGTCTCTCATTCTCGTTCTATCTCTCAGTCTTTCCCCGTCTCTCTCCATCCCCTTCTTTAGTTTTGCCAACCAGATAAACCATGGAGCCATCGTCGAGTTGGCGGGGGGCGGTGGATCGGGTATTTTGCCATGTCCCCAGAAGAGATGACGCGGCGGCTCGGGTTTTGGGAGGTGGTCGTCTTGTTCCGGGGCACCGTCACGCCGCTTGTACACCTCCGCCGCTAGCCGCCTCTCGCGAGGATACGCTGTCGGCGGCGACGGGAGGGGTGGATCCGGCGACCTTTTCCCCTCCTGCCATGGATACCCGTCGTCTCTCGTTCCCCTCTTGTGCGGATCTGCCGTCCGCGGCGATGGGTGGGTCGATCCGGCGACCTCCGTAGTCTCTCAAC | |||||||||
gi|58683798|gb|CK072485.1|CK072485 65989rsicem_11340.y1 Oryza sativa cv. PA64s panicle ferile cDNA library Oryza sativa Indica G TGTTTGGTTGGAGGGACTAAA EST sequence (targeted fragment marked with yellow): GCCAAAGAAAGCTCATGGATTTCGGTTAACATCCACTCTTCTCCAGTTAGTCCTCCAAGCACTATAGCTTTGGTTCCTCCAACAAAACAGGTGCTGTGGCCCCAGGCAAACCGTGGGGGTCGCCCAGGAACATTCAGTATCCTCCAGGTAGGCTTT | |||||||||
gi|88584069|gb|CI701594.1|CI701594 CI701594 Oryza sativa (japonica cultivar-group) library (Kikuchi S) Oryza sativa Japonica Gro TGTTTGGTTGGAGGGACTAAA EST sequence (targeted fragment marked with yellow): GATGAGGGGAATTTATCTCCTCGATGTTCTCTATCTTTACCCTTAAAAACCGGAGCTTAATTCCTTGTATTTCAACCGAATCAAACTCGTTTAGAGTTTATCTCTCCAACCAAACCATCGGATTTTCCGGTTTCGATTCCTTTCGTTCCGAGTTCGATCTCCTTAATCCGAGCCTATAAATAGCATCCTCTAGTCGCCCTCTTCGGTTTGCCTCGTGTTCTAGTTGCAGCCGTCGCTCGTAGCGCCGCCGCCGTAGCCGCTTCACCCGCCTCGCGCCGTCGCCGTGGTGGTCGTCGCCGGTCGCCGTCGCTTTCACCGGGTTCGCGAGGAGAAGCCGCAGA | |||||||||
gi|86492011|gb|CI134644.1|CI134644 CI134644 Oryza sativa (japonica cultivar-group) Panicles less than 5cm stage and Panicles two TGTTTGGTTGGAGGGACTAAA EST sequence (targeted fragment marked with yellow): AAATAAAAATATATATTTAGACAAATGCATGTCAGAGCTAGCAAACGGAATACGCATATGCAGCACACTCTGATCATATAGTACCCACACACCATGCATGCACACCACAAATGTATATTAGGGGTGTTTGGGAACTAGGACTAAATTTAGTCTCTCTCACAAAAATATAAGTCTCTATAATAGGAACTTATATTTTTGTGAGAGGAACTAAAGTTTAGCCCCACTTTAGCCCCTCCAAACAAACACCACCTTATTCTTCATCATACATACGTATACGTATACGTAGGTCTACCAGCGTACTATACGTACAATACCACAATAATTATTGTCATCTTCATCGTCGTCGCTCTTACGGAATACAGTATAATTCGATCGAATGCATTCAATATTTGCATCCATGGCGATCGATCTAGAGGAGGCCGCCTTTGCCGGAGTCGACCTTGAAGTAGC | |||||||||
gi|88320855|gb|CI528007.1|CI528007 CI528007 Oryza sativa (japonica cultivar-group) 1 day after pollination pistil Oryza sativa J TGTTTGGTTGGAGGGACTAAA EST sequence (targeted fragment marked with yellow): GCACCACACTCTGATCATATAGTACCCACACACCATGCATGCACACCACAAATGTATATTAGGGGTGTTTGGGAACTACGACTAAATTTAGTCTCTCTCACAAAAATATAAGTCTCTATAATAGGAACTTATATTTTGGTGAGAGGAACTAAAGTTTAGCCCCACTTTAGCCCCTCCAACCAAACACCACCTTATTCTTCATCATACATACGTATACGTATACGTAGGTCTACCAGCGTACTATACGTACAATACCACAATAATTATTGTCATCCTCATCGTCGTCGCTCTTACGGAATACAGTATAATTCGATCGAATGCATGCAATATTTGCATCCATGGCGATCGATCTAGAGGAGGCCGCCTTCGCCGGAGTCGACCTCCAAGTAGCCGAGGTGGAGAGCAGTCT | |||||||||
gi|88377933|gb|CI638067.1|CI638067 CI638067 Oryza sativa (japonica cultivar-group) 14 days after transferring callus Oryza sativ TGTTTGGTTGGAGGGACTAAA EST sequence (targeted fragment marked with yellow): TAAAAAAAAAAAAAAATAAAAAAAAAAAAAAAAGAAAAAAAAAAAAAAAAGTTAGGTCGGATCCAACAGTCCTTTTTTTTTTTTTTTTAATGTAAAATCACTTTTCATTTTATGATCATTTGGCAGTGTCAAAGTACACTTGTCTGAAACATACTTTATTACCTCCAACAAAACGAAATGGACGGTAACTATNATAAGAGTAGCTATGAAAAGATGTAAGGAAAGGGGAAAAAAGGTGTGCTTCATAACGAAGCAGTTACAGTAATTGGCGCAGCCGACCACAGCAAATGGTCTGTTCAGTAACTGATTACTCCAATCTACTACATGTCCCAGCTGACAAATCGTGTTCTTCATGTATTGTNGTTCAATCAACTGGTGCTGGGCTCTCCGATNGAAACAGATGCTA | |||||||||
gi|117235574|gb|CT860797.1|CT860797 CT860797 Oryza sativa (indica cultivar-group) cv. Guang Lu Ai 4 Oryza sativa Indica Group cD TGTTTGGTTGGAGGGACTAAA EST sequence (targeted fragment marked with yellow): GTAGTTCTTCCAGCCAGTCCAGACGACGTGCCCTTCCCATCAATCCGTCCACAATCAAACCACTTCCATCTCTCAATTCTCAAGCACACACACAATCCAACAAGCTTCTCGAAGAATTCTCGATCGAGGTGGAGTGGCGGTGTATGCGCGATGGGGCTGGATGTGGGGGAAATCGGCGTCGGCGCGGCGGACCTGAGCCTGGATCTCAAGATGTTCGCCGCCAAGAGCTTCGGCCGCGTCAGGGGCAAGGACACCACCACCACCGCCATGGGTGACTGCATCCGGAGGCTCGAGGAGGAGATGGGCAAGATCGAGGTCTTCCGCCGCGAGCTCCCCCTCTGCGTCCGCCTCCTCGCCGACGTGATTGATGTGATGAAGGAGGAGGTGGAGAAGAAGGGTGGTGATCGTAAGGAGGATGAGGAGGACGCCGCCGGCGACAAGAGCAACTGGATGAGCACCGCGCAGCTCTGGACTGGGAATTCCGGCGGCCCAGACGCCGCCGCCGCTGATCCAGAGAAGCAGGACAAGGTGAGGATCTCGTCGGAGGCGAAGTCCAACGGCGGCGCGTTTGTGGGCTCTGGCGCGCCGGCTTTCGCGCGGCCGAAGCAGAGCTTGATGAGGAAGGAGGACATGGCGTACGACGTCAGGATGCCGGATCTGTCTCTGCTCTCGCCGCCTGCTTCCGCCGCCGCCGCCGACGAAAGCCGCCGTCAGGTCGTGGGCTTCGCCCAGGCCGCGGCGAGGGCTGCCGCCATGGCGGCGTCTGGCCCCGCTCTCAGCCTCCAGCCCCAGCCTCAGCCGGCGGCGGCGCAGCAGCAGCAGCAGGCGAAGAAGACGAGGCGGGGCTGGGCGGCCGGACCTCCACCCGAAGTTCGTCGCCGCCTTGCAGCAACTGGTGGCCCTCAAGTTGCCACTCCAAAGCAATAAGGGGAGCTGATGAAGGGGGGAGGGACGGCCAAAGGACGAGGCAAAAAGCCATTTTCAAAATTCCCGCCGGGCCAACCCGGCCCAAATTGGCAACCTCAAACAATGGGGAAACCAACCCAATTGTGCTCCAGCCCAGGGGCCTTTGGTACTTTTTCTTAAAGAAACAAAAAAAGTTCCCCAACTTTGGGATCCCCTCGGGGGGGCCCTCTTTCTTTTTTTTCTTAATGCTCTCAGGCCTTGTGGCCCGGGGGGGGGGGGCATCTTTTGGGGGGCGGGGAACAAAGGCGACAAACACGCCCACAAGGAGGAAAAAAAGAAATGTTATTTACAATTTTCTCCTTCCCACCAAACATCCATTTACATGTGGTCTGCTCTTT | |||||||||
gi|33806747|gb|CF329255.1|CF329255 NACL--04-I06.b1 Rice callus plasmid cDNA library (NACL) Oryza sativa Japonica Group cDNA clon TGTTTGGTTGGAGGGACTAAA EST sequence (targeted fragment marked with yellow): TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTCCCCAAAAAGACCCCCGTTAAAGGAACCGGGGGGGAAAAAAGGGGGGGTTGGGCCCCAAAATTGCCCCAAAACCCTTGGGCTCCCCCAAGCTTAAAAAAAGGGGGGCCCCCAATTTTTGTCCCCCCAACCAAAAAAAGGGCCTTTTTTAAAAAACCCCTTAAACCTTCCCCCGTTGGTAAAAAGAAACCCCCCAAAGCCCGGGGGATAAAAAAAAATTAACTTTCCCCAAAATTTTCTGGTTTTTTCCCCCTTTTAAATTTGACCCGGGTTTGCCCCCCCCCAAAGGGGCCCCCCCCTTTTTAATGAAAAAAAAAAAACCCCC | |||||||||
gi|88224483|gb|CI222663.1|CI222663 CI222663 Oryza sativa (japonica cultivar-group) mixed callus (Normalized Library) and mixed s TGTTTGGTTGGAGGGACTAAA EST sequence (targeted fragment marked with yellow): TTTTTTTATTTTTTTTTTTATTTTGACCACATCACCGGCAAACGGGAGCTCCTTTTTTTTTCCTTTTAAAGTTCGATCTGATCACACATTCACACAAACGCGATCGAACAAATAAAAATAAAAACCCAGTCTCTTTAGGGGGTGTTTGGAAACTAGGGACTAAATTTAGTCCCTCTCATAAAAACATAAGTCCTGAGAGGGACTAAAGTTTAACCCCACTTTAGTCCCTCCAACCAAACACCACCTTAGTACCATCATCAGTTGGCTCCTCCAGCCTCCAGGTACGCCTCTGCAGTCACGGTCAGCAAACTGCCTATGCCGGCCGTCGGCTTGCTGCCCCCTGCCCTGTTTTTGACGGTAATTGTCACTGGGCGTCACGTTACCCTGCCCATGGCACGGCTGCTGCTACTGTCGCACGCGGCCGTGGTGGGATCGATCTGGCCTGC | |||||||||
gi|86484056|gb|CI126689.1|CI126689 CI126689 Oryza sativa (japonica cultivar-group) Panicles more than 5cm stage and Panicles one TGTTTGGTTGGAGGGACTAAA EST sequence (targeted fragment marked with yellow): TTTTTTTTTTTTAATCTCACACAAGCTGGGATTTATTATTCAGATTAGAACATATTTGCACTCAGACTGACAACTTAGAAGCCAAACCTTTCTCTAACAAAAAGACACCTAAAACTCCTTAACTGATTAGCACAAGCCTAACATATTGATCAATCCCAACCACAATTAGGGAGCAGTCAAACCTAAAAAAAAAGCAAGCACAACCTTTCTAATCAAAAAACATTATACAACTGGATCACACTAATAGCTGCAGAACCCTGAAGAAAGGCTGGTCGTGAGCTCTGCACACGGCCCCGGCTGCACACCCAGCGCCGCGCCATGGACGTCCCTGCACTTCCAAGCTGCATTATTCCTCCAACCAAACAGCTTCACGTTGGCGAGGCATATCCTCGTGAACGGCGAGTTCCTGATCCCCTCGAT | |||||||||
gi|29626551|gb|CB631562.1|CB631562 OSIIEb09C18.f OSIIEb Oryza sativa Indica Group cDNA clone OSIIEb09C18 5', mRNA sequence TGTTTGGTTGGAGGGACTAAA EST sequence (targeted fragment marked with yellow): CTGCCGTTTTATGCCCTCCAGCCGAACAAAGGTGCGCTATTCTATCTGCTGGAAAAGTCACCTATGTCGACCAATCATCCGGTGAAACTCGCCATGCTTATGCTTTTAGCATTATTGTTGTTGTCTTATGGAGTTGGCAGCATCCGTTGCGCAACGGCCACAGACAACAGCACGGATATGTCATCGTTGCTCGAATTCAAGAAGGCCATCAATGATCCAACGGGGGCATTGAACAGTTGGAGCACGGTCGTTCCCCATTGCCAGTGGATGGGTGTTAATTGTAGCCGAAGGCATGCCGGCCGAGTCACGGCACTCAACCTTGCTGCTCAAGGCTTGTCGGGTTCGATTCCCGCCTCTGTGGGAAACCTGACATTCCTTCGTACACTTGACCTGTCCAGTAATAACTTCTTCGGCCAGATGCCCCATCTTAACAATCTCCAGAAGATGCAAATCCTTAACCTGAGCTATAATTCATTAGATGGCATAATACCAGACACACTCACCAATTGTTCCAGCCTCAAGGAATTACATCTCTATCATAACACTCTAAGGAGTGAAATTCCAAGGAACATAGGTCTCCTTACTAATCTAGTTTTGTTGGCCCTTAACAGTAACAATCTTACCGGTTCCATCCCTCAATCTGTCGGTAACATTACCCATTT | |||||||||
gi|88558842|gb|CI489368.1|CI489368 CI489368 Oryza sativa (japonica cultivar-group) 40 days after pollination pistil Oryza sativa TGTTTGGTTGGAGGGA-CTAAA EST sequence (targeted fragment marked with yellow): GTTCTTTTTTTTTTACAGAGCACGTTCTGCTTTATTACACAGCATGTCATTGTTTCAGACCAAAACTACTCCTGCACTTAGGGGGTGTTTGGGAACTTANAGACTAAATTTAGTCTTTCTCACAAAATTATAAGTCCCTATGGTAGGGACTTATATTTTTGTGAGAGGGACTAAAGTTTAGTTCCACTTTAGCTCCCTCCAACCAAACACCACCTTAGTAAACTACATGCCTGCTCTTTCCGGTGGCAAAATTGAAGCGACCCAGGCTTCTGCATTCCGTAATCTGGGCGCTGTGTTTCCCATTTTCTACAGAAAAAATAGCAACAGACTATCCAACAGGAACTTCTGTACAGCATACAAGTA | |||||||||
gi|88252740|gb|CI351168.1|CI351168 CI351168 Oryza sativa (japonica cultivar-group) flower Oryza sativa Japonica Group cDNA clone TGTTTGGTTGGAGGGACTAAA EST sequence (targeted fragment marked with yellow): GCATAAATAAAAATATATATTTAGACAAATGCATGTCAGAGCTAGCAAACGGAATACGCATATGCAGCACACTCTGATCATATAGTACCCACACACCATGCATGCACACCACAAATGTATATTAGGGGTGTTTGGGAACTAGGACTAAATTTAGTCTCTCTCACAAAAATATAAGTCTCTATAATAGGAACTTATATTTTTGTGAGAGGAACTAAAGTTTAGCCCCACTTTAGCCCCTCCAACCAAAAACCACCTTATTCTTCATCATACATACGTATACGTATACGTAGGTCTACCAGCGTACTATACGTACAATACCACAATAATTATTGTCATCTTCATCGTCGTCGCTCTTACGGAATACAGTATAATTCGATCGAATGCATGCAATATTTGCATCCATGGCGATCGATCTACAGGAGGCCGCCTT | |||||||||
gi|89181243|gb|CI112749.1|CI112749 CI112749 Oryza sativa (japonica cultivar-group) Panicles two weeks after flowering Oryza sati TGTTTGGTTGGAGGGACTAAA EST sequence (targeted fragment marked with yellow): AGCAAACGGAATACGCATATGCAGCACACTCTGATCATATAGTACCCACACACCATGCATGCACACCACAAATGTATATTAGGGGTGTTTGGGAACTAGGACTAAATTTAGTCTCTCTCACAAAAATATAAGTCTCTATAATAGGAACTTATATTTTTGTGAGAGGAACTAAAGTTTAGCCCCACTTTAGCCCCTCCAACCAAACACCACCTTATTCTTCATCATACATACGTATACGTATACGTAGGTCTACCAGCGTACTATACGTACAATACCACAATAATTATTGTCATCTTCATCGTCGTCGCTCTTACGGAATACAGTATAATTCGATCGAATGCATGCAATATTTGCATCCATGGCGATCGATCTAGAGGAGGCCGCCTTTGCCGGAGTCGACCTTGAAGTAGCCGAGGTGGAGAGCAGTCTGGTGGTGGTCCGACGAGTACT | |||||||||
gi|66916277|gb|CX103125.1|CX103125 RECm4132 A normalized whole-life-cycle cDNA library of rice Oryza sativa Indica Group cDNA cl TGTTTGGTTGGAGGGACTAAA EST sequence (targeted fragment marked with yellow): TCCGTAGGCACGGTCGGAATCCGGTGTGACCACGCTGTCGATCTTAATTTCTCTCTTCATCATCTCGCTATATACGTGCAATGGCGGTGGCGCAGGTGAGCAGGACGGCCGTGGTGGCGCTGGTCCTCGTCGCCGTGGTGGTGGCGGCGGCGTACGTGCCGGCGGCGACCGCGTACGGCTGCTTCGACGACTGCTACGAGCGCTGCGCCAACGGGAAGACGGACGACGCCTGCAACTCCATGTGCAAGCAGGCTTGCAGCGGCGCCGGCGGCGGCCCCGCCGAGGCGCCCGACGAGGCTTGATCGCCGACGACGAGCGCCGCCGCGCCGCCGTCCATCGATCTCCATATCCGCCCGGTAACCGCCGGGCCTATATATAAACACTCGCATTATTCGTCAGTCTGTTGTTAATTCAAAGTTGATTGATTTAACCGTCGAGTATCTAAATTAGTTGGGCCGGTCCGTTTACATTTATGCAAGCTGGTGTACTCTCTCAGCGATTTGTACCTCCTCGGGTGATCACATCACCCTGCCCTTGGTCCCACCCACCAAACACACACCACACACCCAACACACACAAACCACAAACCACACAACGCAACCACAAACGACACACCCCACCCCAAAAAGAAACACGCACAAAAAAAAAACCACACGGGGCGCCACCCCCACCCACCTCACACCGCAAGAAAGCACACAACACACGCGGCCCGCACACACACACGACACACAACGAGACCCCGCACCCCGCTACCACAAAAGCGGGCCGACCCGTGCACGGGATCCCAACCAGACAACACACACAAGGCACCCCAGACGGGAAACAGAGACACCACACAGACGGCGAGAAAAACCACCACCACAACACACAACGCAAAACCACAAGAAACAAAACCCGAGCCAAAAAGAGCC | |||||||||
gi|88400187|gb|CI590877.1|CI590877 CI590877 Oryza sativa (japonica cultivar-group) flower Oryza sativa Japonica Group cDNA clone TGTTTGGTTGGAGGGACTAAA EST sequence (targeted fragment marked with yellow): GAGGAGTAGCCAGGAAAGAGAAGAAGAAGCAATTGGGGAGAAGCCAAGCCAAGGTTGGGGAAGGGAAGGGAAGGGAGAGGAGAGGGGCTCGCCGATCGATCCCTCTCCGCCTCCGCCGTCGAACCGCCGCGTCGTGTCGAGTCGAATCGAAGATCGAGCCGCTCCTCCACATCTCCACTCGCGGTCGCATCCTCCAGCGTCGCCGGGCGCGGCTGCTCCGCTTCCCGACGCCGCCTCGCCGCTCCTCCAGCTCAGCTCCCCCTCGCGCGGGTCTCCTTTTATATACTCTCTCCAGCCGAACAGCGGTGGTGGCCGCCTATAGCGCCGGCTGTCGTTAGGGGAGACGCCGGGTAGTCGTAGTAGGTTCTGGCGTGAAGTTCGCAGGACTGTGATGTGTGATCCCCACCGGCTGTTGCCTCCTAGGTCCCTGCTTGCTTGC | |||||||||
gi|88554664|gb|CI484856.1|CI484856 CI484856 Oryza sativa (japonica cultivar-group) 40 days after pollination pistil Oryza sativa TGTTTGGTTGGAGGGACTAAA EST sequence (targeted fragment marked with yellow): GTTTTTTTTTTTTTACAGAGCAAGTTCTGCTTTATTACACAGCATGTCATTGTTTCAGACCAAAACTACTCCTGCACTTAGGGGGTGTTTGGGAACTTAAAGACTAAATTTAGTCTTTCTCACAAAATTATAAGTCCCTATGGTAGGGACTTATATTTTTGTGAGAGGGACTAAAGTTTAGTTCCACTTTACTCCCTCCAACCAAACACCACCTTAGTAAACTACATGCCTGCTCTTTCCGGTGGCAAAATTGAAGCGACCCAGGCTTCTGCATTCCGTAATTTGGGCGCTGTGTCTTCCATTTCCTACATAAAAAATAGCAACAGAGTATCGAAAAGGAATTTCTGTACAGAATACAAGTACAA | |||||||||
gi|88521124|gb|CI448783.1|CI448783 CI448783 Oryza sativa (japonica cultivar-group) 40 days after pollination pistil Oryza sativa TGTTTGGTTGGAGGGACTAAA EST sequence (targeted fragment marked with yellow): GTTTTTTTTTTTTTACAGAGCAAGTTCTGCTTTATTACACAGCATGTCATTGTTTCAGACCAAAACTACTCCTGCACTTAGGGGGTGTTTGGGAACTTACAGACTAAATTTAGTCTTTCTCACAAAATTATAAGTCCCTATGGTAGGGACTTATATCTTTGTGAGAGGGACTAAAGTTTAGTCCCACTTTACTCCCTCCAACCAAACACCACCTTACTAAACTACATGCCTGCTCTTTCCGGTGGCAAAATTGAAGCGACCCAGGCTTCTGCATTCCGTAATCTGGGCGCTGTGTTTTCCATTTTCTACAGAAAAAATAGCAACAGAGTATCGAACAGGAACTTCTGTACAGCATACAAGTACAACANGCCGGGGCCTTTTGCAATCGTCCCTTCGGGAGAAAAAAGAGAAGGGAATAGCTAC | |||||||||
gi|88830969|gb|CI080393.1|CI080393 CI080393 Oryza sativa (japonica cultivar-group) ABA: Abscic Acid treated callus Oryza sativa TGTTTGGTTGGAGGGACTAAA EST sequence (targeted fragment marked with yellow): CTTTTTCTTTTTTATTTTTTCTATGTGTATTTATAAAGGAATATGTATTTATAATGGAGTGTGTATTTATAATGGAATGTGTATTATGTATTAATTTGATGGGGTATATTCACCATCTCAAGTGAGAGGTGACCACACCTACAAATCCACCATACTTCCTCCAACCAAACAAAAAATTGGATCACCAAATCTACCTTTGTCCCTACAACCAAACAAAAAATTGGATCGTCATATTCACACAACCAAACAAAAAACTGGACCGCCATATCCAGCAAAATATGGACCGCCGTATCCCATCCAATCTTGACCAGGAACCAAACACACTCTTAGTGGACAAATCTGCTTATGGTTTCCTTCAACTTTTTAGATACAATGGTAGATCCTTATGGGTGCAATCTATATCTATGTTATGTATGTGATGGCAAAAAACTTTCGTTGTGTACTCAATTGATATGTCTGTCAACATGTATTTGGCTGGTCTAAGCAACAT | |||||||||
gi|88841584|gb|CI080840.1|CI080840 CI080840 Oryza sativa (japonica cultivar-group) ABA: Abscic Acid treated callus Oryza sativa TGTTTGGTTGGAGGGACTAAA EST sequence (targeted fragment marked with yellow): GAACGGAGATATTGGAATCACTTTACAGAGCAAGTTCTGCTTTATTACACAGCATGTCATTGTTTCAGACCAAAACTACTCCTGCACTTAGGGGGTGTTTGGGAACTTAGAGACTAAATTTAGTCTTTCTCACAAAATTATAAGTCCCTATGGTAGGGACTTATATTTTTGTGAGAGGGACTAAAGTTTAGTTCCACTTTAGTCCCTCCAACCAAACACCACCTTAGTAAACTACATGCCTGCTCTTTCCGGTGGCAAAATTGAAGCGACCCAGGCTTCTGCATTCCGTAATCTGGGCGCTGTGTTTTCCATTTTCTACAGAAAAAATAGCAACAGAGTATCGAACAGGAACTTCTGTACAGCATACAAGTACAACACGCCGGGGCCTTTTGCAATCGTCCCTTCGGGAGAAAAAAGAGAAGGGAATAGCTACACCTCCGGTCCTGACGCAAAGAGGTTGACAAGGCCTCGGAAAGCTTGAACAGATACCTCACAGGCCTGAAGAAGTTCTCCGTCCAAGTTCCAGACACTTTCGTCATGTGACGATA | |||||||||
gi|88439028|gb|CI531208.1|CI531208 CI531208 Oryza sativa (japonica cultivar-group) 5 days after pollination pistil Oryza sativa TGTTTGGTTGGAGGGACTAAA EST sequence (targeted fragment marked with yellow): CAAGAAGAGAAAAATGGTACTAGTATCTCATCTGTAAGTAAATGACGATGTACACCATGGAGTTGGACCAGATCTAGAGTGTCACTCAGTTCACAATTTACAAATAGTTTTGAGTTCATATATCAATCATGGGAGCAATGAATAAACTCGGGTGGTATAAGCACACTCTGCCGAGCTCCTCTGCAAAACAAGCACGCAGCACGCCCAAGCATGCGCTATGCTGTTAGGCCTTCCAACTAGACAGTAAAAAATAATGAACTCAAACCAACCACAAATTGGTCGCTCAACTAAGCTAGTCAATCGTATCAGCTACACGCTGTGGCGCGATGTTCCTCCAAAGGGGCATTGTGCATCAGATCATAATGCAAATCATCATCCCTAGCCACTTCCTCGC | |||||||||