mature miRNA: TTACGTTGTGAAACGGAGGAA species: Oryza sativa database: miRNEST The numbers on the right side of the alignments show a score calculated for them. When calculating the score, a mismatch is given a score of 1, bulge: 2, and wobble: 0.5. |
Predicted miRNA targets | |||||||||
gi|86483764|gb|CI126397.1|CI126397 CI126397 Oryza sativa (japonica cultivar-group) Panicles more than 5cm stage and Panicles one TTACGTTGTGAAACGGAGGAA EST sequence (targeted fragment marked with yellow): TTTTCATACAACAGTCCTCCACTAATTCTTCTTGATTATATACCAAATGTCACTGGTACCATAAAACAAACGGAAACACAAACTCTGCAACAATAATGAACAACCTAAGCTTTCTAGAGGTAAAATCTTGCTCACGCAGCTCACGATTTGATCTGCAAGAAAGAAAAGAAAGAATAAGCAAAATGACAATGTGATGGGCACAAAGTTAAAAGGTTATTTAGATTGGCTATTACACTATCCACAAAATAGAACTTTTAACAGAGAAAGGGGTAGAGTAAAAAAGCAAAAGCAGCAAAGAGCAACAAATAACTCAATGGAAAAAAAAAATGGAAATACGTATCAACAAATGTTACTCCTCCGTTTCACAATGTAAGTCATTCTAGCATTTCCATTCATATTGATGTTAATGACGGAGGGAGTATTTCTAAGCACGCCGATTTCAATTTTGTACTAGCACCTTGGGTCCTTGGATTGTGTAGGCTGTTTACTTAAGAAACATGAGCTCGAGTTCTTTT | |||||||||
gi|94362160|gb|CI052477.1|CI052477 CI052477 Oryza sativa (japonica cultivar-group) cold treated callus Oryza sativa Japonica Gro TTACGTTGTGAAACGGAGGAA EST sequence (targeted fragment marked with yellow): TTTTTGTCAAGTTGTAACATTTCTACTTTGAGGATTACAAAAAGGTTATTAATCTGGTTTTACTAGAGCTAGCCTTAATAGCTACTCCCTCCATTTCACAATGTAAGTCATTCTAGCATTTTCCACATTCGTATTGATGCTAATGAATCTAGACATATATATCTATCTAGAATCATTAGCATTAATATGAATGTAATGACTTACATTGTGAAACGGAGGAAGTAGCTCCTCATAACATTGATCAAAATTTATACATTTGAAAATTATTTTGGTTCCCTTCACAGAAGCTTCACACAAAGAAGCTGAGACATATATTACAACATTACACTATATACTAGTCCAATCACATCTCCAAATTCACTCCCCCATCCCATGGTTGCTCATTGCAGAAGAAATTAATTGATGTGTAGCCTCGCCGATGCGCAAGCACCGGGAGGCAATATGCATAGATCCTACGTCGAGAAGGTCAGGAACTA | |||||||||
gi|58689457|gb|CK078144.1|CK078144 79409rsicen_2996.y1 Oryza sativa cv. LYP9 booting whole plant cDNA library Oryza sativa Indic TTACGTTGTGAAACGGAGGAA EST sequence (targeted fragment marked with yellow): GGTTTTTTTTTAAGTTCAGAATCAACCAGAAGACGATAGATTATAAATACTCCCTCCACCCTAAAATATAGTAAATTTATACTGCTAGGATGTGTCCCATCTACGTGTTGAGATTTGTTCTACATGTGTCCTATCCGGTATAAGGTCGCTATATTTTGGGACGAACTTTCTCCGTTTCACAATGTAAATCATTTTAGCATTTCTTATATTCATAACATCAATATAAATATGGGAAATGATAGGATGACTTACGTTCTGAAAGGAGGGAGTACGGACTAATTAACTGTCGCAATTATTCGAACGCTATCATATATCTGTGCGATATCATTCTGTAGCGTTTACTCCGCAGAACGCCTTGAGTGGGTCTCTGAATTTGCGGCCTTCCTCCGAGTAGCGGAACTGGATGAACTCCTCCGCCTTGCACGGCCTGTACGCCAGCGGGTGCTCGCCGTCGACGAGCTCGTCCATGGCGCTCAGCACCGCGCCGTCCTTGCTCCGGCTGCCGACCAGCACGCAGTACCGCTCCCGCCCGCTCGGCGTCCTCACGCG | |||||||||
gi|29613335|gb|CB618348.1|CB618348 OSIIEa02D01.r OSIIEa Oryza sativa Indica Group cDNA clone OSIIEa02D01 3', mRNA sequence TTACGTTGTGAAACGGAGGAA EST sequence (targeted fragment marked with yellow): GGAGCGGATACGGCCGCTCGTCGAGGTGCTGCCGGAGCCCGGGGTACCGGTGACGTGCCTCGTCGGCACGGGCGTCGACACCGTGGAGAGCCTCGTGTACGGGGAGGGCGGGTTCGAGGCCGGGCCGGAGAAGGTGGTGTACGGCGACGGCGACGGGACGGTCAACCTCGACAGCCTCGTCGGGCCGATCAAGGCGTGGTCCGACTCGCCGGAGCAGGTGGTGGAGGTGGTCGAGCTGCCCGAGGTGTCGCACTCCGGCATCCTCAAGGACAAGAGCGCGCTCGACCAGATCTTGAGGATCATCGACGCCATCAATCTGAACGCCACGACCTCGAGCTCCTCCATCAATCGATCGTCTCAGGATGTTTTGTACAATTAGATTATATTGCTCGCTTCAAGATTTGCTTCTTTTAATCGTTGAGAATTTGCAAGGGGGTACTCCCTCCTCCGTTTCACAATGTAAGTCATTCTATCATTTTCTATATTTATATTGATGTTAATGAATCTAGACATATATCTATTTAGATTCGTTAAGATTAATACGAATATGGAAAATGCTAGAATGACTTATATTGTGAAACGGATGAAGTAGTTAGCTACCTATAGTGGCCGGTCAAGTGCATGTTTTTTTGCACGTTGACAAGCCAATTAAGGCAACAATAAGGGCAATTAAAATGTGTTCCTTTCGTAATAGTACTATCAGTATCATATTAGCCT | |||||||||
gi|29670835|gb|CB667110.1|CB667110 OSJNEd14E19.r OSJNEd Oryza sativa Japonica Group cDNA clone OSJNEd14E19 3', mRNA sequence TTACGTTGTGAAACGGAGGAA EST sequence (targeted fragment marked with yellow): AATTTTAAGGATTCAGATAGATCCATGCAGTACTTTAGGTCTATAAAACACCGATCATTATAAATTCCTGTATATATGCATGTTCAATACATAGTGTGTTGGCTTGATAGCCCAAGGCTTGGAGAGCAGATGAAGTACTGCATGGATCCCCCTGAGGAGGTGAGCAAGCTAGCCAAAGTGAAAGCTCAGGTCTCTGAAGTTAAAGGCATCATGATGGAAAACATTGACAAGGCCATTGATCGCGGACAGCAGATCGACGTACTTGTCAGCAGGACAGAGCAACTCCATGACCAGGCTGTTGATTTCAGGCACCAAGGGACGCGAGTGCGGCGCAAGATGTGGTCCCAGAACATGAAGATCAAACTCATCGTCCTCGGTATCATCATCGCGCTCATCCTCATCATAATCCTCTCCGTTTGCCACGGCTTCAAATGCTAGATAGTATTCGTTATGCACTCCCCATTGTTGTCATCCTCAATTCATATATATATATATATATATATATATATATATATATATATATATATATATAATTGCTACTCCCTCCGTTTCACAATGTAAGTCATTTTAGCATTTTCCACATTCATATTGATGTTTAGATTCATTAACATCAATATGAATGTGGGATATGCTAGAATGACTTATATTGTGAAACGGAGGAAGTAGCAAGGAATTATTTTGATAGTAGTACATTTTAAGGGTAATACTAGTAGTTGCTTTTTTGCCAAAAAACCCTTAAAAGGAAAAAAAA | |||||||||
gi|88243661|gb|CI244058.1|CI244058 CI244058 Oryza sativa (japonica cultivar-group) Shoot and root of germinating seeds Oryza sat TTACGTTGTGAAACGGAGGAA EST sequence (targeted fragment marked with yellow): TTTTTAAATAAATTCGCCGGGTCGACAAAGAACGCCGACCGTAGTATATTAAGAATTTAGAGAATGTACAGAGATGGCGAGGCTTCGCAGCCACCGCCTATTTACACGATGCACACCACTATCCGGAGAACCCGGAGGAAGCCACATAAGGGCCTCTCACAGCGCCGTTAACAGACCGGCCGCCTTCCAAGACTCCCATTCATCTTCAATGGCTGCGCAGAGCAAAGAAGACGATGTTGCCACGCCCTCGAAGACTCGACCATTTCGTTCCTTCCAAATCTTGTTAAATAAATGAGAATTGAGCTTCAATCACATGAACAGAAAAGCTCCTCATAAATTCAGAAGTGGCATTCATAGCAAGCGAATTCAGACTTGACAAGCTCCTGATAAGTAGAACTTCCTCCGTTTCATAATGTAAGTCATTCTAGCATTTCTCACATTTATATTGATGTTAATAAATCTAGTCTAGATTCATTAACATCAATATGAATATGGAAAATGCTAGAATGACTTACATTGTGAAACGGAGGGAGTAAC | |||||||||
gi|86504709|gb|CI147342.1|CI147342 CI147342 Oryza sativa (japonica cultivar-group) mixed shoot (Normalized Library) Oryza sativa TTACGTTGTGAAACGGAGGAA EST sequence (targeted fragment marked with yellow): TTTTGTTACGATAAAAAAAATTACTTCAGTTAATAAAGTTTCTGTAACTAACTTGGTTCTTTTTTTATCACTAACTAACATGGTACTCTCTCCGTTTCACAATGTAAGTCATTCTATCATTTCTCACATTCAAATTGATGTTAATGGAAATGGAGGAAGTAGTACTGTAGTACTGTATTTTTTTTTTTTCTTGAGGCCAACACTGGTAGGCTTAAACTGGCATGACTTGTGTGTTTCTTTCCTTTTTCCTTTCTCTCTTTGTCATCATCAACAGGAGATCCATGGAAATCAGCATCAGGAAGCCCCGGGGCTTCTCCTCGGCCACGGCAGCCGGCCGTCCACCGCCGGCGAGTCGTCGGAGGCGAGCACCGGCAGCTTCCCCTTGCCTTGCCGCGGCCACTGCCAAATCTTGGACACCGAGAAGCTGTCGCCCTTGCTGCCGGCGCCGATCTTCTTCCCGTCGGCGGCGGCGGCGGGGTCGTTGGCGGCCGGGTTGGCGCCGGCGAGCCCTCTCAGCCTCGCGCTGCCATTGCCGTGGCCGTGCCTCCGGTGTACGGACACCTGCAAGC | |||||||||
gi|218487439|gb|FG970150.1|FG970150 MA_LYP9_08934 Mature embryo cDNA Library of LYP9 Oryza sativa Indica Group cDNA 5', mRNA seq TTACGTTGTGAAACGGAGGAA EST sequence (targeted fragment marked with yellow): AAGCTCACATACCAATCAGTATGGAGGTTCACTGGGGAACAAGAGTTGATACAGTGATAGTCTAAAAGCCTGGCCCCCATCACCCCATGGCTTCCACTTTTTCCTCTCTGCACGTGTTAGTTCAAGGCAAAGACTTTGCTATGGTGTCACACTGTTGCTTAATGACTGGAATGCAGGAAGCTTACTGCTGTAAAACCTAAAGCTCCCCTACATCTACATGTGCCTTCTTGAACTGATTATCTGATTATAGTCACCTTTGTGTATCCTGTAGCATACTTCCTCCGTTTCACAATGTAGACTTTCTAGTATCGCCCGCATTCATATAGATATTAATGAATCTAGATTCATATGTGTGTCTAGATTCATTAACGTCTATATGAATGTGGACAACGCTAGAAAGTCTTACATTGTGAAACGGAGGGAGTA | |||||||||
gi|88535428|gb|CI464228.1|CI464228 CI464228 Oryza sativa (japonica cultivar-group) young ear Oryza sativa Japonica Group cDNA cl TTACGTTGTGAAACGGAGGAA EST sequence (targeted fragment marked with yellow): AATACAATAAATTTGCAATGGCATGATCCAAAATGACAGACAGACACACATACACACGTACGTACGTACTCCCTCTGTTTCACAATGTAAGTCATTTTAATATTTCTCATATCTATATTGATGTCAATGAATCTAGACATATATATATCTATCTAGATTCATTAACATCAATATATATGTGGAAAATACTAAACTGACTTATTCTGAAACGGAGGAAGGACATTATTATTTGTAGGGATTACAATCCATGGGCCCAAGACGGGGTTCATTCATGAGCTGGCGAGGTACGTAGGACAGCCTTAACCTAAGCTGGTGTATGAACTCGCTGATGTACCTCTCATGGAGCTCCTCGTCGGCGACCACCTCTCGCAGCTTGAGGGCGTTGGCGACGAACA | |||||||||
gi|87018082|gb|CI275896.1|CI275896 CI275896 Oryza sativa (japonica cultivar-group) mixed callus (Normalized Library) Oryza sativ TTACGTTGTGAAACGGAGGAA EST sequence (targeted fragment marked with yellow): GGTGACAAAACAAATGAGCTACTACTAGTATTGTAGCACTAAAGTTGCAAAGTTTGAATACCTTGCACTCATGTGGTTGGTGTTGTTTCAATGCAAAGATGATGGTCCAAGGTGCACAGTGGCCATGGCCAACCTAGCCAGCTACTACCGAGTGGCAGTATATGCAGCACTATACAGTAGTAGTAGTATGGCTAGCTCAAGCTCATCAGTGTTTATATATATATGCAGTTGTGAAGGCTCTCATCAGTAGCATACCTCTTTCTGTGGCACATATGCATGTACACATAACCATTTGGTTCTCTCTACCTCTTTCTTGCTGCTGATTCAGTTGCTCATCCAAGGCAAGAGGTATGCACATTGTTTGCCTGTCAAGTGTCAAATACTCCCTCCGCTTCACAATGTAAGTCATTCTAGCATTTTCCACATTTATATTGGTGTTAATGAATCTAGACATACATATCTATCTAGATTAATTAACATTAACATAAATGTGGAAAATGCTAAAATGAATGGTCACCTGACTTGAAATCAGGTGCTTGCAGTTTTTGTTGCTGTTGTTTTGTTGCAGGTAGTTAACTGAAGATTGCAAGGTGAGACTGACAATGGTGGCCAG | |||||||||
gi|86504119|gb|CI146752.1|CI146752 CI146752 Oryza sativa (japonica cultivar-group) mixed shoot (Normalized Library) Oryza sativa TTACGTTGTGAAACGGAGGAA EST sequence (targeted fragment marked with yellow): TTGCGTTAACGTTTACTGAATTCATCGCAACAGATAAAAGGAAGCAACAATCTTTTGCAAGTTCATGATGTTCTTAGCCAAAATTCTACGACATCATAAAAGACAGTTGTGTCTGGAGGATTGTGTCCCGTCGATCCAATACTAAAAAAACATGCCTTGCATTAGCGCAACTGATTACTGATGGCGTTCATGACGATCCAAATCAGTCCACAAGGGTGCCCAAGATGTCATGCTCTCTGAAGAGAAGGTACCTGGAATTCCAGATGCAAAGATTATTAGAGCAATGGTAAAACATAATTTATATCATATACTGACAGCAACAGTATCAGCATAACTATCAGGAACATACAGAATATTGGATGAACAAAAATCATCATAATAGATCATTTTCCCACTCAACGTTCAACCAATAGCTAGCAACAGCAAGCATTCTAAATATTGAACTACCAGAAGAAAGCAGCCTAAACGAGGAAGCACGTGTGGTTCCCGGTTCTTCAGCAACACCACCACCAAGTATTCGATCAATTCCTAACTGTAGCACTCACAAGTACTTCCTCTGTTTCACAATGTAAGTCTTCTAGCATTTCCCACATTGATGTTAATGAATCTAGATAGATATATGTCTAGATTCATTAACATCAATATGAATATGGGAAATGCTAAAATGACTTATATTGTGAAACGGAGAGAGTAATTACTACTTC | |||||||||
gi|88510969|gb|CI438475.1|CI438475 CI438475 Oryza sativa (japonica cultivar-group) leaf of seedling gamma-irradiated (9.5min), a TTACGTTGTGAAACGGAGGAA EST sequence (targeted fragment marked with yellow): GGAAATTAAGCACAACTGGGATCACAATTTATATAAGAATCTAACACTCATACATCACTCAGTTTCTACAGTCCAATATAGACTCAATTTGTACAATCCTAATTTCACTCACCTCCAACAACAATGATCGGTTGTACATCACAATTTACATAAGAAAATTTACATAAGATTCTTTGTTATACATCACTCATAACTCCAAAGTTCACTTGTCTACTACTTCCTCTGTTTCACAATGTAAGAATTTCTAGCATTGGCCATATTCATATAGATGTTAATGAATCTAGGCATATATGTGTCTAGAATCATTAATATCTATATGAATATGGATTTAGAAAGTCTTACAATATGAAACGGAGGGAGTATCAGTTAGCAGATCAATGAACCAACTATGACACAATTGTAGACCAGAGAATATTTTAGAA | |||||||||
gi|29658450|gb|CB654725.1|CB654725 OSJNEc07H16.r OSJNEc Oryza sativa Japonica Group cDNA clone OSJNEc07H16 3', mRNA sequence TTACGTTGTGAAACGGAGGAA EST sequence (targeted fragment marked with yellow): ATCAATGAGTTGGTATACGATGCGATAAACAACGGCGTGTACAAATGTGGCTTTGCCAAGAAACAGGGGCCATATGATGAGGCTGTCACGAGATTATATGAGGCTCTGGACAAATGTGAGGAAATTCTAAGCAAGCAACGTTATATATGTGGCAACCAGTTGACAGAGGCTGATGTTCGCTTGTTTGTAACTCTTATAAGATTTGATGAGGTTTATGCTGTCCACTTCAAATGCAACAAAAGGCTCCTCAGGGAATACCCCAATCTGTTCAATTACACCAAGGACATCTACCAGATTCCTGGCATCAGCAGCACGGTTAACATGGAGCACATAAGAAAGCACTACTATGGAAGCCATCCGTCCATAAATCCCTACGGGATCATCCCTGCAGGCCCTAACATCGATTACAACGCTCCACACGACAGAGAGAGGTTTAGTGCCTAGGAGAAGATAAGTAGTACTCCCTCCGTTTCACAATGTAAGTCATTTTAGCATTTTTCATGAACGTGAGAAATGCTAGAATGACCTGTAAAACGGAGGAAGTATCTCTTATGGTACTTTCTGTATTGAGTCACTATGCTTCGTTGCTATGGTATCGAGGCTGTGGCTAATAATGCTTGGAGGGTTGGTTTGTGTTTTGGTTGTTGTATTGTAATACAGGGATTGGAAAAAAAAAAGTTACCGATAGAGAATAAGAAGTATCACTCGACCAAACAGAGACAAGCAAAAGTTATGTGGTAATAAATAACAAAAAGTTTTTGGTTCC | |||||||||
gi|88469334|gb|CI406605.1|CI406605 CI406605 Oryza sativa (japonica cultivar-group) leaf of seedling 50ppm CuSO4 for 3 days Oryza TTACGTTGTGAAACGGAGGAA EST sequence (targeted fragment marked with yellow): CTTTTTTTTTTAATCAAAATAATAGTGGTATTTTTTTAATACAGTAAAATTTGCAATGGCATGATCCAAAATGACCGACAGACACACGTACGTACGTACATGCATGTATTTTTTTAATACAATAAATTGGCAATGGCATGATCCAAAATGACAGACAGACACACATACACACGTACGTACGTACTCCCTCTGTTTCACAATGTAAGTCATTTNAATATTTCTCATATTTATATTGATGTNAATGAATCTAGACATATATATATCTATCTAGATTTATTAACATCAATATATATGTGGAAAATACTAAAATGACTTATATTCTGAAACGGAGGAAGGACATTATTATTTGTAGGGATTACAATCCATGGGCCCCAAGACGGGGTTCATTCATGAGCTGGC | |||||||||
gi|88839882|gb|CI017647.1|CI017647 CI017647 Oryza sativa (japonica cultivar-group) green shoot Oryza sativa Japonica Group cDNA TTACGTTGTGAAACGGAGGAA EST sequence (targeted fragment marked with yellow): TTTGTTGTATCAGCTAAACATAAATTAGCTTAAATTAGATGACACTTTACAACGAGTGGTAGCTATGAACCTCAGAGACAAACCATATCATGTCAAAGATATAATTTGTAGTTTTCTTTTGTTTATTTCTAACGATACAAAGTAGTATAATCTCTTCTCTCCAACTAGCTAGACTGCAGAGTTGATTGATCATCTTATAATTAATTCTTCGGTAAGCTAGCGGCAGATTATGTACGGCCGACCTGTCTTCCCTTTATTCGTTACTTCCTCCGTTTCACAATGTAAGTCATTATTATGAAACGGAGGGAGTAACACTTAACACTGAGCCACTACCTTAGTATCACTGCTCGCTCTTCTTTTTATCGATCGTCTTCATCAGCTCCCGCATCTGTTCCTCATCAAGAGGTAGCCTCGTCTCTGTGCACAATGTGTGTGCCATCATGAATCCATTCGGACCATTCATGAAAGATGGAGCATTAGAGAGAGGGTGATGAATGCTATGGACATGCGAAGGAGGCGGAG | |||||||||
gi|88720061|gb|CI745151.1|CI745151 CI745151 Oryza sativa (japonica cultivar-group) 1 nuclei stage pistil Oryza sativa Japonica G TTACGTTGTGAAACGGAGGAA EST sequence (targeted fragment marked with yellow): AATGAACACAGATCCGTGGTATTCAGCCTACCACTACTCCCATCCACCCCTTGTTGAAAGGCTCTCTGCTCTTGAAGACGCAGACAGCAAAAAGGAAAACTAACGGAAAGTTGATCCACCTGAAACACCGAAGTCTTTACTCTTCCATGGGTTACCTTACGGTGTCATGGAATCGTTTCAATGTTCGGGATGTTAATGGAATGTGTGAGTACATGAGAAGTACTGTAAGCGTTCAAACATTTATCATACAGGGGAACGTTGGCAACTATGTAGCTCTCGATTAAGATAGTTTGCCTTCCATTAATTGGCTTACAGATATTGACATATACTCCTTCCATTTCACAATGTAAGTT | |||||||||
gi|86597659|gb|CI274650.1|CI274650 CI274650 Oryza sativa (japonica cultivar-group) supermix Oryza sativa Japonica Group cDNA clo TTACGTTGTGAAACGGAGGAA EST sequence (targeted fragment marked with yellow): GTTTTTTTTTTTTTTTATCTTGAAACGTCAGGTTTCTTGTTCTTAAAATAACATCAGCCACCAGGACTGTTAAATGCACCTTTTACATAGATACCGGTTACCAATAAACCCCACCTAACAGTAATTCGAACAGCTCGTAAACACTTGCAAAGCCTCGATGGGCACATCCCAGTACTTTTGGCACAAGACAAGCATAATTTTTTTGGCCCGTATTGATGAACATACTAGGATACAGTGGAGGTGGAGCTTCAGCTTGTTTTGACTTTTGACCCACTAAGCTAGTAAAAGTGGCCATCACCTTTTTTCTGATTTTAGGGTGATGTATCATAAGAAAGCCTGCCATGACTTTGCAATTACTGTATTATCTGCAAAACATGTAGTCTGTTGAATCAGTGCAATCCATGGGAAAACAAGCATTAGATATGGTGCAAATCCATCGGTTAATAAAATAAAAAATGCTTCTAGGTATTATAACTGAAGGAAAAGTGAAAAAAACAAAAAAAAATGAATAAGACCAATAAAATTGCACAAATTGTAGTGTCATGAATGAAAAATCCCAATAAAAGGAGTAATAGATAATAAGAAAGCAAATTCACTAGCACACGCATCACAACTAATATGATACTCCCTCCATTTCACAATGTAATACATTTTGGGAAGTCATTATTAAGTACTTGCTCCAAGCAAAGAACATTCTTGTCATGATATGTTCACTGATAAG | |||||||||
gi|87005326|gb|CI285548.1|CI285548 CI285548 Oryza sativa (japonica cultivar-group) etiolated shoot Oryza sativa Japonica Group c TTACGTTGTGAAACGGAGGAA EST sequence (targeted fragment marked with yellow): CATCAATCATGGAAGCATTTGCCTTGACATCCTCAAGGAGCAGTGGAGCCCAGCATTGACCATATCAAAGGTCCTCCTATCCATCAGCTCTCTTCTCACTGACCCCAACCCAGATGATCCCCTTGTCCCAGAGATCGCCCACGTCTACAAGAGCCAGAGGCCACGTTGAGGAGACGGCGAGGGCCTGGACCCAGAAATACGCAATGGGTTAGCAGCTATCATTCTTGACAACGTTGCACCTTGCAAGAAATCGAGTCTAGATGGTTGACTGTCATGTTAAGATCCAAGATGGTTATGTCTCTCTGAACTAATTGCCCGTTTCTGTACAGTACTGTCAAAATTGCATCATCTGTAAATCCCATGTTGATTCACACTTTGGTTTATACCCTGAAGAGCGTGCGTGATCATGTCATTTGTGATTATTGTAACCTTGTCGAGAAGCCAGTCAGACTTGTATGCATCAACACATATTTTTCATAATTTTGTGGTGGTTTGGTCCATTTCTATCTGATGCCTTTACTGTTATTTTCAGAATCAACAGGCTTGTACTCCCTCTGTTTCACAATGTAAGTCATTTTAGCATTTCTC | |||||||||
gi|88667811|gb|CI722550.1|CI722550 CI722550 Oryza sativa (japonica cultivar-group) 1 nuclei stage anther Oryza sativa Japonica G TTACGTTGTGAAACGGAGGAA EST sequence (targeted fragment marked with yellow): AACTTGTCCTCTCTCTCTCTCTAAGTTGTTGGAGTCCGAAACGATATGCCGTCGCCGCCGTGGATGGAGGCGGAGCAGCAGAAGGACGAGACGGCGGCGACGGCGACGATGGAGGAGGGACATGGTCTTCGTCGTCACAAGCGGCGGCGACTCGTCGGCCAACAAGCTGCTACGACGCAGCTGGTTGAAGAAGTTGATGATCAGCAGCAGCAGCAGCAGGAGGAGGAGGCGCCGACCTGCAGCATTTGTCTGCAACCCTGGACCTGCAATGGCGACCATCGCATCTGGTATACTCCCTCCGTTTCACAATGTAAGTCATTCTACCATCTCTCATATTCGTATAGATGTTAATGAATCTAGACATATATATATCTATCTAGATCCA | |||||||||
gi|86523045|gb|CI163251.1|CI163251 CI163251 Oryza sativa (japonica cultivar-group) shoot and callus Oryza sativa Japonica Group TTACGTTGTGAAACGGAGGAA EST sequence (targeted fragment marked with yellow): AGTACAGTCCGGACAAACCCTGTTTATGTGCTATTGCAACATTTCCATACGGGCCTGGATAAGGAGTCTGCATTCTATCTGGATTCATTGATTTCAAAATGTTGCTACCTATTGCAAAATTAGACATTTCCTATCTATCTAGATTCATTGTACTATGAAGTACAACACTCCCTCCGTTTCACAATGTAAGTCATTCTAGCATTTCTCACATTCATATTGATGCTAATGACATATATATCTGTCTAGATTCATTAACATAAGTATGAATGTGGGAAATGTTAGAATGACTTACATTATGAACGGAGGATGTATCTAATTAATCATATACCAGGTAGTAATATTTTTTATAAGTAATATATGAAAATGGCACTTCCCCACAAAGCCTATATGTCTTTAATCGTAATCTATATGATTAAGCGGGATTGGGTTAACAAAATGGCTCTCGAACATATCCTTTAGCCCCAGGCTATTGCTGAAGCCATTCTTCTTGCCATGGTATAGGAGGGTGGCGGACATGCACAGGTTGGCGATCCGCTGCACGAACGGGAGGAACGCGCGGTGCTTGAAGCG | |||||||||
gi|117233387|gb|CT848120.1|CT848120 CT848120 Oryza sativa (indica cultivar-group) cv. Guang Lu Ai 4 Oryza sativa Indica Group cD TTACGTTGTGAAACGGAGGAA EST sequence (targeted fragment marked with yellow): GACAACGTGAATACCATAAGCACGAACCTTCTTGTAGTGTCTATCCAGCAAAAGAAGAGAAAACATATGCTATAATGGGGTGCTTCAGGTGATGGGAACATCGATGAATAGGAGGAGCTTGCTTCAGGCCAAGGGTGGCTGCCCTGTGAGCTTTGAGAACCAGAACTACACGACCATCACCAGCAAGTGCAAATCGCCATGGCCTGCCGACCTCTGCTGCCCAGCTCTGAACGAGTTCGCATGCAATTTCAGCCAATATATCAACGACGAAAGCACCAACTGCGCAGAATCGATGTGGGCCTACCTCAACGCCCATGGAAACTATCCAGCTGGCCTGTTTTCAAACGAGTGCGCAGTGCTTGACTGCAACGGTAACAATAGCACCATTAGTACTAACCAAACTGCTAATGGAAGCGGCACCCGAGGGGCTAAAGGAATAACAGAGATGTACTCACTTGTGACGACCTTAATTGTATCTGGATTCCCGGTGTTATTGTTCTACTGAATGAAGTACTCCCTCCGTTTCACAATGTAAGTCATTCTAGCATTTCCCACATTCATATTGATGCTAATGAATCTATATAAATATAGAATGACTTACATTGTGAAACGGAGGAAGTAAGAAAAGATGCACTATCACACAGAATGGACATGTTACAGTTGTGGTAATAAGTTGCGTTTCAGCATATATATACATTACGAGATAAGAGTACCCCCAGATTTCCTTTTTTTTTTTTCTTCTTAATTTTCTTTCATGGCATTTACACTCATTCAATACATGTGGATATTTTTTTTCTTCTTTTGAGCAATAATGCTTCTCTTTACTCTTGTAAAAAAAAAAAAAAAAAA | |||||||||
gi|88963432|gb|CI028448.1|CI028448 CI028448 Oryza sativa (japonica cultivar-group) etiolated shoot Oryza sativa Japonica Group c TTACGTTGTGAAACGGAGGAA EST sequence (targeted fragment marked with yellow): TTTTTGCAAGATATAATGTGTTATATATGTTACTCCCTTCGTTTCACAATATAAGTCATTTTAGCATTTCCCACATTCATATTGATGCTAATGAATCTAGATTTACTCCCTCCGTTTCACAATGTAAGTTATTCTAGCATTTCCTAGATTTATATTGATGCTAATGAATCTAGACATATATATCTATCTAGATTCATTAGTATTAATATGAATGTGGAAAATACTAAAATGACTTACATTGTGAAACGGAGGAAGAATTTCGGTTTAGCGATGATTCTAAAACTAAACACTTTTCCATAAGACGAGGGACCCCGAGTGAACATTTTCCTTAGCCGCTCGCAGGGTCCAGCTGGGGCGCGGGAGCGCGAGACGCAAGCCCGCAACGCTGGCGTGCTCGCGTGAACTGGGTCCCGCACCGATTTATGGGGTCGACGCACAAATTGGCATCGTTTAAGCTGGCTTCGTTGTAGATCCTATAATAACGATACATCATTAATTCGATCATCCC | |||||||||
gi|88474663|gb|CI411934.1|CI411934 CI411934 Oryza sativa (japonica cultivar-group) 4th leaf leaf 1mM ACC(1-aminocyclopropane-1-c TTACGTTGTGAAACGGAGGAA EST sequence (targeted fragment marked with yellow): GGATCTAAGGTGTTATGGAATCAATTAATCCTTTTCAATATCGGGATACATGGATGGATATATCTTTATCCATATATCTTTCACAATCAATCACAAATACTTAATTTGGTCACGAAACAAAGCACCGCTTTGCCCAAGGAAGTGAAGGTAGAGCCAAGTGCCGTGTGGTGTGGTGTATGCACTTCTAGGCCCTTCCCGTGTACTAGATCACCCAGTGCTTCGTGTACTACAAACCCTCTGCCATCTATTATAGTAGGGCTATTTCATCAATTATCTATTTGCATTAAACTTATTTTTACTTAGCTATGTTCACTAGTTTGTTTTTTTCTTTTCACAACTTAAAAATGTTTCTTTATTGTAAAAATATTATGGCCAAAACATTTTTGACGTAGAGGT | |||||||||
gi|88665826|gb|CI715982.1|CI715982 CI715982 Oryza sativa (japonica cultivar-group) 1 nuclei stage anther Oryza sativa Japonica G TTACGTTGTGAAACGGAGGAA EST sequence (targeted fragment marked with yellow): AACTTGTCCTCTCTCTCTCTCTAAGTTGTTGGAGTCCGAAACGATATGCCGTCGCCGCCGTGGATGGAGGCGGAGCAGCAGAAGGACGAGACGGCGGCGACGGCGACGATGGAGGAGGGACATGGTCTTCGTCGTCACAAGCGGCGGCGACTCGTCGGCCAACAAGCTGCTACGACGCAGCTGGTTGAAGAAGTTGATGATCAGCAGCAGCAGCAGCAGGAGGAGGAGGCGCCGACCTGCAGCATTTGTCTGCAACCCTGGACCTGCAATGGCGACCATCGCATCTGGTATACTCCCTCCGCTTCACAATGTAAGTCATTCTAGCATTTCTCATATCCGTATAGATGTCAATGAATCTAGACATATATATATCTATCTA | |||||||||
gi|29673411|gb|CB669686.1|CB669686 OSJNEe02F21.r OSJNEe Oryza sativa Japonica Group cDNA clone OSJNEe02F21 3', mRNA sequence TTACGTTGTGAAACGGAGGAA EST sequence (targeted fragment marked with yellow): ATCGCTCAATCATGTTCCTGTGTGGAAGGATGAAAGACCACCAAGTATTAGAGGTGGGGACGAGTTGAAGGTATACAAAATTTATCCAATCGGCCTTACACAACGACAGGCATTATACCAGTTCAGATTTAGAGATGACGCAGATCTTGACAAATACATTAAAGATCATCCATGTGCAAAGCTTGAAGTGATTTTTGTATAACTATGCTCTAGACATTTTCTTTTCTTGCGCCTTTCTCTAGTTGAAAATATACAATGTGTAGTTTCTGCTGTACGGTAAGCTAGTCTGCTAGTATGTCTTATGTAGTACTTCCTCCGTTTCATAATGTAATTCATTCTTGCATTTCTCACATTCATATTGATTTAATGAATCTAGATAGATATATATGTCTAGATTTATCAACATCAATATGAATGTGGGAAATGCTAGAATGACTTACATTGTGAAAAAGAGGGAGTAGCAACCAATTCATGCTCACACAGATCTATCTACAATCAAAAGCACAGCCTTGTTAGGCATTGAGATACATCGATTGTAAATTTTCATCGACAGGCCAGATGTTTTGTTTTTCTCACTTTTTTGGGTAACAGTCAACAAGGGATTGACTTGGGACAATGAACGATATTGCTGTGATATAATGTAATGTACTATGTTATAACTGTAGTCACGGAGAAACATCAAAAAACGTTTGCAGAACAACTGAAGTACCACCTTTGTAATGACATAAGGGGGGATTTGCATTAATGTAGGTTCAGGTTCATCTTTAAAAG | |||||||||
gi|33658033|gb|CF280647.1|CF280647 14ETL--07-G11.g1 Rice etiolated leaf plasmid cDNA library (14ETL) Oryza sativa Japonica Group TTACGTTGTGAAACGGAGGAA EST sequence (targeted fragment marked with yellow): TTTTTTTTTTTTTTTTTTATCTATACCTCCCCAATGTTAGATTTATACTTCAAGAATCAGCGTCACAGAAAAACACAGAGTAACACCAGAAAAATTAATAGTAGGACACTTAGCTCCACGGAGATTACTAACAGACGGACCATACTGAGAATACTGTTTTTGTTTCACAACGTAAGCTTAAACGTGCAATGAGTAAATACCCTTATATATACGACTTTGCAACTGGCATAGCACATATCTACAGATTTTAGAGAGCTAATCGAACCAGCTTTGTCGATAAGATAATATAGCTAAGTGACACTAAATATGAAACCCTGCCCAGTCAAAGCCTCAGACCTTTGTGCCATCAACATCAGAAGCAAAAACCTGGCCATAATCGCCCTTGTCATCCTCATCCAGATAGTCAGACCTTGCATTGAGAGCTAGCATCTGGCAAACAAGCCAGAAGAGAGCAGCATCAAGGGCCAGGAAAGCGGCTCCTCCAAAGAGGCCAGTCTTCGCAGTAGGGCACTGGGTATCCAGGTCAT | |||||||||
gi|29687613|gb|CB683888.1|CB683888 OSJNEf12O06.r OSJNEf Oryza sativa Japonica Group cDNA clone OSJNEf12O06 3', mRNA sequence TTACGTTGTGAAACGGAGGAA EST sequence (targeted fragment marked with yellow): GCGGCCGGTGTTCGGCGTGGTGAGCCCCGACAGCGCCCTGTACGCGCCGCTCCTAGGGTTCTTCGTCTTCACCGGGATACCCACCTCCGGATTCTTGTGGTTCAAGGCCGTGCAGACGGCGAACAAGGAGGCGGAGGAGCAGGATCGCCGGGACGGCTTCTCGTGACTGATTCAGCATATGAACATACGCATTTGCAGAGTAATTAAAGTTTGTGAATTACTGCTTGTGATTCGTGGTGTTAATTAAGTTGGTGACGCTGAAGAGGGGAGACGGATCTGCGTATTGACGCAATGAGGAGATGAATTAGCAAGGAAGAAATGGCGATGTTCAATTGTACATCACCGAAGGGAGCTAGCTGTTGAAGTGAAAGTGTAAACTCTGCCTTGTAGTTGAGAAATATTGAGTGTTTCGAGCGAGTATAATTACAGCGAATTATCTGAACACTGAATTATCGCCACGGATTATTTGGTCCATATGCATCTGAGAGAAACTGTTTTCTTAGACCCGCTATTCTAATCTACTTTCTCTATTTCACAATGTAAGTCATTCTAGCATTTCCCACATTCGTATTGATGTTAATGAATCTAGACATATACATCTATCTAGATTCATTAACATCAATATGAACGTGAAAAATGCTAGAATAACTTATATTGCGAAATGAAGGAAGTATCTGTTAGTACTAAGTTTGTAATTTATACTCCCCCCGTCGCAAAATAAATGCAGTTTTGCACTGCTCATGTAAAAAAAGAAAAAAAAACTCGAGGGGGGGCCCGGTACCCAGC | |||||||||
gi|117247855|gb|CT861183.1|CT861183 CT861183 Oryza sativa (indica cultivar-group) cv. Guang Lu Ai 4 Oryza sativa Indica Group cD TTACGTTGTGAAACGGAGGAA EST sequence (targeted fragment marked with yellow): CTTCCAGCCAGCCGAGACAACGTGAAGTTCACCTATGGCCGGCCATGGGACGCAAGGGATGGAGTGTTGCTTCGTAGTGCCCAGCGAGAAGACGCCGAGGCATGTCCTCTGGCTTTCTCCCCTCGACATCGTCTTGGCCAACAGAGGAGCCCTCACCCCGCTCGTGCACTTCTACCGCCGCCGCCATGATGCCGCCGGCGGCGGCGGCGGCTTCTTCGACGTGGGCAGGCTCAAGGAGGCTCTGGCCAAGGCGCTGGTGGTCTTCTACCCCCTCGCCGGCCGCTTCCGCGTCGGCGGCGACGGTCGGCCCGAGATTGACTGCAACGCCGATGGCGTCTTCTTTGCGGTGGCTCGGTCGGAGCTCGCCGTCGATGACGTCTTGACTGATCTCAAGCCGTCGCCGGAGTTGAAGAGGCTGTTCATCCCCCGTACTGAGCCGCCGTCTGCCGTGCTCGCCGTACAGGTCAGTGTTTCGTTTCGCTAGTTCGTTCCTACTTGATGACGCCGTTAACTTTTGGATCTAATTGTTTGTTTTATTTAAAAATTTTATGTAAACGGATTAGATATAAATCATCCTTAAAATACCTTTAGTAATAAAATAACTCACAATAAAATAAATAATTATTATATTTTTTTAATAAATGATCTAAACGTCAACAGTGTTATCTATTAAAAACGAAGGTACTACCTCCGTTTCACAGTGTATGATATTCTAACATTTTCTATATTTATATTGATGTTAATAAATCTAGACATATATATTTATATAGATTCATTAACATCAATATGAACATGGGTAAATGTTAGAATGACTTACATATTGGTTCTACCATTTTCTATATTCATATTAATATTAATAAATCTAAACATATATATCTATTTAAATTCA | |||||||||
gi|88279593|gb|CI400593.1|CI400593 CI400593 Oryza sativa (japonica cultivar-group) callus 50ppm CdCl2 Oryza sativa Japonica Grou TTACGTTGTGAAACGGAGGAA EST sequence (targeted fragment marked with yellow): CACAGAAAAACACAGAGTAACACCACAAAAATTACTAGTACGACACTTACCTCCACGGAGATTACTAACAGACGGACCATACTGAGAATACTGCTATCGTTTCACAACGTAAGCTTAAACGTGCAATGAGCAAATACCCTCATATCTACGAGTCTGCAACTGGCATAGCACCATATCTACAGATCTTAGAGAGCTAACCGAACCAGCCTTGTCGATAAGATACTATAGCTAAGTGACACTAAATATGAAACCCTGCCCACGTAAAGCCTCAGACCTTTGTGCCATCAACATCAGAAGCAAAAACCTGGCCATAATCGCCCTTGGTATCCTCATCCAGATAGTCAGACCTGGCATTGAGAGCTAGCATCTGGCAAACAACGCAGAAGAGAGCAGCATCACGGGCCAGCAAA | |||||||||
gi|89166315|gb|CI103405.1|CI103405 CI103405 Oryza sativa (japonica cultivar-group) Panicles one day after flowering Oryza sativa TTACGTTGTGAAAC-GGAGGAA EST sequence (targeted fragment marked with yellow): TTTTTTTTTAGAAAGAAGTACCAAACTGTTCTCCCCATAGTAATTTGTACATATAGGCACTAGCACAGCATTAGTTCAGTCTACTAATACCCCAAAAGAACAAGAGGAACTTAAATCTAATCACCATTTTTAATTGCTACTTCCTCCAGTTTCACAATGTAAGTCATTCTAACATTTCCCATATTCATATTAATGTTAATGAATCTAGATGGATATATATGTCTAGATTCGTTAGCATCAATATGAATATGAGAAATGCCAGAATGACTTACATTGTAAAACGGAGGAAGTAATTAGTAGCATGATTAGCAAAGAGAAGCCATGACCTACTCTTGTTCTCTTCCTAATTGCCATGCTACAACATTCAGAGAAAACGCCGGCCGCCGTCGCCGTCGTTGAGGCCTTTGTTCACTCGACGGCGGCCGATCGGTCGCCGCGCAGCGGCACGGCGGTCGCCTTGAGCGGCCGCTTCATGACGACGGTGAACTCGAGCTTCTCGGTGAGGTCGACCTCATCGCCGG | |||||||||
gi|88455310|gb|CI519331.1|CI519331 CI519331 Oryza sativa (japonica cultivar-group) after pollination embryo Oryza sativa Japonic TTACGTTGTGAAACGGAGGAA EST sequence (targeted fragment marked with yellow): AACAGAACCCAACATTATTACATTCCTTTCTTTTATTTAACGATGACATAACCGCTAGGGTTAACAGAACCCAACATTATTACATTCCTCTTATATTTTTCTTCCAGGAACATTATTGCGTTATATTACTACTGAAAATCTGAAATATCTATCCTTCTTGGGTTCTTGCCTCGACGTGGCAAATGTGATGACCATAATAATAATTATATGGTCTACTCCCTCCATTTCACAATGTAAGTTATTCTAGCATTTTCCACATTTATTTTGATATTAATGAATCTAGATACATTGATGTTAATGTGGAAAATACTAGAATGACTTATATTGTGAAATGGAGGAAGTAGCTCCCGAAACTCTACGGACATACCGTTGGGTTGTAGGTGATCCTGATGACGCCGGCGTCGAGGTTGG | |||||||||
gi|112787213|gb|EE592271.1|EE592271 NEW_RNG00054-H10-M13F Rice mixture of leaf, root, panicle Oryza sativa Japonica Group cDNA, TTACGTTGTGAAACGGAGGAA |