miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse




mature miRNA: TTGAGCCGTGCCAATATCA
species: Oryza sativa
database: miRNEST
The numbers on the right side of the alignments show a score calculated for them.
When calculating the score, a mismatch is given a score of 1, bulge: 2, and wobble: 0.5.

Predicted miRNA targets
gi|88431114|gb|CI574285.1|CI574285 CI574285 Oryza sativa (japonica cultivar-group) shoot Oryza sativa Japonica Group cDNA clone

TTGAGCCGTGCCAATATCA
..|||||.||||| .||||
GGCTCGGTACGGTGGTAGT

EST sequence (targeted fragment marked with yellow):
GGACGCCTCGTCTGAACACAAAACCCCGTAAAAATCTCCGCCTCCGCACCGCCACCGTCGCCGTCGCCGTCATGATGGACACCGAGGGGAGCGAGATCCACATGGGGGACCTCGGCGGCGCAGCCGCCGCCAAGGCGGAGGATGGAGAAATATGGACATTTAGCGTAAGATCCTTTGAGGCACCTCCCCCAGAACGAACTATTCATGTGAACTACGAAGGCTTCGCTGAAGATGTGAGAGTTGGTGATGAGCTTCTTGTTGATGGTGGCATGGCTCGGTTTGAGGTGGTTGAGAAATTAGGACCAGATGTCAAGTGCCGTTGCACAGATCCTGGTTTGTTGCTGCCACGTGCCAATCTTACATTTTGGCGGGATGGTAGTATTGTCCGTGAGAGGAACGCTATGCT



gi|117231677|gb|CT846968.1|CT846968 CT846968 Oryza sativa (indica cultivar-group) cv. Guang Lu Ai 4 Oryza sativa Indica Group cD

TTGAGCCGTGCCAATATCA
||||.|||||||| |.||
AACTTGGCACGGTGTTGGT

EST sequence (targeted fragment marked with yellow):
ATGAGCACCACCCCACCCCACCCCACCCCACCGGCGGCGATGGCGGCGGCTGCCCCCGCGACGACGTCATCCGCGGCCGCGAGGCCCTCCTCCTCCTCCTCCTTCTCGCGGCAATCCGACGCTCCTCTGCGCGCCGCCACCGTCTCCTTCCCTTACTCCCCACGGCCGGCCGCGTTGGCTGCAGGCGCTCGGGCCTCGCGGGTTAGCCCCGTCGTGGTCGCCGCCGGCGGCGGGCACCAGCGGCTTATGGGGTCGTTGACTAACACCCAGGGGCTCAGGTTTGGAGTGGTTGTGGCACGGTTCAATGAGATTGTCACCAACTTGCTACTGCAGGGAGCTCTTGAGACATTTGAGAGATATTCCGTCAAAAAAGAAAATATAACAGTTGTAAGTGTTCCTGGCAGTTTTGAAATTCCTGTTGCGGCACAAAAGCTTGGGAAGTCTGGAAAGTTTGATGCAATTTTGTGCATTGGCGCTGTGATTAGAGGTGACACAACCCACTACGATGCTGTTGCAAACTCTGCTGCTTCAGGTGTACTGTCTGCTGGATTGTCTGCTGAGATCCCATGCATATTTGGTGTACTGACATGTGATGACATGGACCAGGCTCTAAATCGTGCTGGTGGTAAGGCTGGAAACAAGGGAGCTGAAGCCGCTCTAACTGCAATCGAGATGGCCTCGCTGTTCCAGCATCACCTGGCCTGACCGCCGGGGCTACTGATATCATCGGGACGGCAAAGTTTTGGCTGCTAGAGATTTTCGCCGTTTGCTATAGCATCTTGAGGCCATTATTATCCATTGTCCCCAACTGGTTGATCGGGATGATGGTTGTGTTTTTACCGCTGTTCTTTTTTGTGAGTTTTTTTGCAAGACTGAAGAGGTATCACCGTCCAGCTAAGCTGTTCAACTGCTGTATGTGAGAAACATGAGACCTTGAATTGAATAACGTCAGTACGTCACCAATACTTTGATTCGTCATGAATAAAAAGCAGGATTTCTGCACTTGGGGATAAAAAAAAAAAAAAAAAAGGCCAGCTGGGCCTCGAGGGGGGGCCGGGACCCCATTCCCCCCTAAGGGGGTCGAATTTACCCCCCCCCTGGGCCGCCTTTTTTAACCTCGGGGCCGGGAAAAAACCGGGGGTTTTCCCAATATAAACCCCTTTGGCCAACCTCCCCCCCTTTTCCCCCCGGTGGGGGTAATAAAAAAAAAAAAACGCCCCCCCCCCCCACCGCCCCCCCCTCCCCAACAAAATTTTGCGCCCCGCCCCCCCGGGGGAGGGGAAGAAGAAGGAGG



gi|117246287|gb|CT862661.1|CT862661 CT862661 Oryza sativa (indica cultivar-group) cv. Guang Lu Ai 4 Oryza sativa Indica Group cD

TTGAGCCGTGCCAATATCA
||||||||.|||||||||
AACTCGGCGCGGTTATAGA

EST sequence (targeted fragment marked with yellow):
TTTTTTTGTTTTTGAGAATCCGCGGGGCGGCCGCTCTAACTGTGGATCCCTGGGCTGCAGATTCGGTACTCTTTAAAGGGGTCGAGAGACGGAATCTCCGCCTCCCCTATATAAGATAGGAGTACTCTACATGCTGCTATGATCAATATTGCCCTCATGTCCTCCTCGCTCTTGCCATCTCCCCAACCCCACCACCCTGCCGCTGCCGGAGCCGGACAGCAGCAAGTCGCCGGAGCCCACCTCCGTGCTCTACAACCGCAGCAGCCCGAGCACCTCCCTCGGCTCCTGCTCCTCCAAACCACCGGAGGACCCTCCTCCTCCCCCCATCGCCGCCGACGACGACTGCGACTGGGACGCCGTCGTCGACATGCACATGCACATGCTCGCCCCCGCCCCCGCCCCCGACTCCTCCTTCTTCCGCTGGATCATGGATACCGGCTATGCCGACGCCGACACCTTTCCCGACCACCCCTCCTTCGACTCCGACCTGCTCCAACTCCCCATGCCCATGCCCTCTGACCATCCTCCTCAGCCGCTCGTCGACGACCTCCCCGACGCCGCACGCCTCCTCGACGCCGGGGACTCCACTTCCGCTAGGGAGATATTGGCGCGGCTCAATCATCGCCTCCCCTCTCTTCCGTCGCCGCCGGGCCATGCCCACCCTCCGCTCCTCCGCGCCGCCGCCCTCCTCCGGGACGCGCTCCTCCCGCCCACCGCCCTCCCCCGTCTCCTCTACTCCCCTCGACGTCCCGCTTCAGCTCGCCGCGCACAAGGCCCTGTCGGACGCCTCCCCGAACGTGCAGTTCCCCACCTCACATCCACCCCAGGCTTTCCTCGAAGCGGTTCGGCTCCCCCGCGCCGCCTCCACCTCCTTGAATTTAAAGTTCGCTTCGGGGGCCCATTGGGCCCCCTCTCATGGTCAGAACTTCGGCAACCACTGGGGCCCTCGCTTGTTGGCCCGCCCCCCAAAACCCCCAAGGGGACCACAATTGGTGTCCCCCCGGGTTCCTCCCCCCCCCTTCGAACTTCCTCCTCCCAAAAAAAAGCCCCCCCCGCTGCTTTTTCCCCCCAAAATTTCGTTATCCCCCTTTATAATTTTATACCCCCCCCCTTTGTTTTTCTTTCCCCCCCTTCTAACAGACCGGTGTCCCCCCAACCTTTTTGTGGTAAATCTTCTCTTTGCCCGCCCCGCCTTCCGAAAGATAAAAAGATCGTGTTGGGGGTGCGTCTCTACTATATTTTTTTTTCATTATCTATACCCTCTCTATAGGTACTTTTCTTTCCTCCGTGGGGTGTGTTGCTCC



gi|218484184|gb|FG968819.1|FG968819 MA_LYP9_07603 Mature embryo cDNA Library of LYP9 Oryza sativa Indica Group cDNA 5', mRNA seq

TTGAGCCGTGCCAATATCA
.||||||||||| | |||
TGCTCGGCACGGTCAAAGT

EST sequence (targeted fragment marked with yellow):
AACCACGCGGTGGCGGCGCCTAAACTATGGATCCCCCGGGCTGCAGGAATCGAATCCCTCAAGTAGAGATCTTGGGAGGCTTCAGGGCACAGAAATCTTCTGTAACGTCAAGCAGTATCCAGTGGTTCACGAAACACCGACTGTACTGACCGTACGCATTGAAACATCATTCCTTTGCTTCGTCAACTCCAGTTCCATCAAAGAAAAGATCATGGGATGGGTAACCGATGAGCGCGAGGCATTTCGCTCGGTCGTTCTTGACATGTCAAATGTGGTAAACATGGATACTTCAGGTCTTGCGGCGCTGGAAGAACTGCACAAGGAGCTGGCGTGTCTCGGCATCCAGATGGCTATAGCCAAGCCTGGATGGCAGGTGATCCACAAGATGAAACTGGCACGGCTCGTCGACGGAATCGGAGAAGGATGGTTCTTCCTCACGGTGGGCGAAGCCGTGGAAGCTTGCCTGGCAAACAAGGCGGGAAACGCCCTGGAATGCTGCTGAATCGAATCCACCGTGTGCATGGTCTCTCCGGTGGTTGAATAAAGAGAGACACTAGTGCTTCGTGGTACGCTACAAAAGGATTGTGTTGTGTGCTAGTGCTGCACGATGATGCAGCTTCAGCTGTAGTGCGGTGCTTCATGG



gi|88566739|gb|CI497456.1|CI497456 CI497456 Oryza sativa (japonica cultivar-group) 4 nuclei stage pistil Oryza sativa Japonica G

TTGAGCCGTGCCAATATCA
||||||.||||||| | |
TACTCGGTACGGTTACATT

EST sequence (targeted fragment marked with yellow):
CTTTTTTCTTTTTTTTTTTTTTTCTTAGGTGAAATGATGTATAAATAGAAATCCACACTCGAGTAGTAAACACCCCACTTGGCTCAACACTCCAAAGTAGAGTGTTCACAAAATTTTGGCCCTACTGGTTGGGAGAAAGGAATTAGGGTCGACAATACAGAGAGCTCAGTTGTCAGTTGAACTCCACACTTGTGATGGAGTTGTACTCACACTCCACACAGCAAGTGTAGTCTTTCCTCAGGAATAACTTTTGCTTGCATTTCCTTCGGCAAATTGANATAATAGTTCACATTGTGGAACTTCATGGTGAGTGGCCTGAAAAGGTTACATTGGCATGGCTCATGTCTCGTGCAATACCTCCCATTATCCTGTCAACCATTGGTGCAAAGCCTACCGTGTAGTATAA



gi|88989146|gb|CI042259.1|CI042259 CI042259 Oryza sativa (japonica cultivar-group) callus Oryza sativa Japonica Group cDNA clone

TTGAGCCGTGCCAATATCA
||.|.|||||||| ||. |
AATTTGGCACGGTAATGTT

EST sequence (targeted fragment marked with yellow):
TTTTTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGGATTTGTAATGGCACGGTTTAAATTTTGTGAATTGTGATGGTATATTTGAAAACTAAAGACAATTTGTGTACAAAACACTACAATTCTGGTGACGTATATTACAGCTACACGCTGAATACTCTGTTACTATCAGATACATTTCCAAACTGATCAAAAATTTGCATTACAACTTCCCTTGCTGGCATCGATCCATTGCTGCATAGAACTGAAATACCTCTTGAAAAGTTCATTCGGCAAGCAAAACTACAACACTGGTACGGAAAATTGCCCCTCCCCACCAGTATTAAGAATCAAACGATTACTCCTCCATAGGTACTTCCGGAACATTCCACCTGTCTTCTTCAATGGGTTTCGTGATCACAGAAACGGGGGAGCATATCGACATGATTGTGTCCTTTTCACCCCTGTTGCAGCTCATCCGAAGTTCCCTACGAATTTCTGGAGTAACCAAATAGTGCTTCTGGTGATCCAACAAGCGTGCAAGTTTCTCCTTGTCCTTTTTCTCTAATTCATTCTTGTATCTTTCCAC



gi|88432851|gb|CI690701.1|CI690701 CI690701 Oryza sativa (japonica cultivar-group) 3 weeks after flowering ear Oryza sativa Japo

TTGAGCCGTGCCAATATCA
||||||| |||||.||||
CACTCGGCCCGGTTGTAGT

EST sequence (targeted fragment marked with yellow):
GATTCAGATCACTCATTCACACTAACCCTAGCTAGCAACCTGCAACCTGCATAGTATATTGCATTGCGCCCAAGCTTTCTTCTTCTTCTTCTTCTTCCCTCGCCGACAACCTCCTCCGTTTGCCCGGCCATTGTTCTTCAGAGCTTGGTCGCGATAGAAAGAAATGAAATTGTAGCTATGATGTTGGCCCGGCTCACTCAGATGGATCATCGGTGCAGAAGAGTGCATGAATCTGATGCAGTCTCAGTGTAGTATGCTCCATGCTGGAACTTCTGATTGAGCCGTGCCAATATCTCAGCACCATTTTTATGCAATCATGCGTACAGATCACTCCCAAAGTCTCAATTTACCATCACTAATCTGC



gi|58671994|gb|CK060680.1|CK060680 63832rsicek_9194.y1 Oryza sativa cv. PA64s panicle ferile cDNA library Oryza sativa Indica Gr

TTGAGCCGTGCCAATATCA
||||||||.|||||||||
AACTCGGCGCGGTTATAGA

EST sequence (targeted fragment marked with yellow):
GCACGAGGCAATCACCAGTCGCCGCATCTCCAGCCACCGCTCAAACGCCACCACGCCATTCCAGATGACCTCTACCTCGCCCGTAACCAGCAGCAGTCATCCGCGGTGGCGCCAGGTCTCGCCTATTCACCACCGCTACATGGCCCGGCTCCGTTCCAGCTCCATCCTTCGCCGCCACCGATTCGCGGGGCGATGAAGTCGACGGCGGCGGAGGCGGCGCAGCAGCAGCTGCTGGACGAGTTGGCAGCGGCGGCAAAGGCAACCGAGGCTGGCAATTCCGTTGGCGCGCGAGAGATATTGGCGCGGCTCAATCAACAGCTTCCCCAACTTGGGAAGCCCTTCCTCCGCTCCGCCTCCTACCTCAAGGAGGCCCTCCTCCTCGCACTCGCCGACAGCCACCATGGCTCCTCCGGCGTCACCTCGCCGCTCGACGTTGCCCTCAAGCTTGCAGCATACAAGTCTTTCTCTGACCTGTCACCTGTGCTCCAGTTCACTAACTTTACCGCAACACAGGCGCTTCTTGATGAGATTGGTGGCATGGCAACTTCCTGCATCCATGTCATTGACTTTGATCTCGGTGTTGGTGGTCAGTGGGCTTCCTTCTTGCAGGAG



gi|58599944|gb|CK010472.1|CK010472 30563rsicef_9590.y1 Oryza sativa cv. PA64s panicle sterile cDNA library Oryza sativa Indica G

TTGAGCCGTGCCAATATCA
||||||||.|||||||||
AACTCGGCGCGGTTATAGA

EST sequence (targeted fragment marked with yellow):
CCCCGGGCGCAGGAATTCGGCACGAGGGCGAAGCGCCACACTCCGGCCCGACAATCTCTTCCTCCTCCACAAGCAGCCCCAGCCACCGCCGCCGGCGCCCGCGCAATGCCTCCCGTTTCCAACGCTACATAGCACGGTACCCTTCCAGCTCCAGCCTTCGATGCAGCATCCGCGCAACGCGATGAAGTCAACCGCGGCGGCGGCGGCGGCGCAGCAGCAACACCTCCTGGACGAGCTTGCAGCGGCGGCGAAGGCAACCGAAGTCGGCAACTCCATAGGCGCGCGAGAGATATTGGCGCGGCTCAATCAGCAGCTTCCCCCAATTGGGAAGCCTTTCCCTCCGCTCCGCCTCCTACCTAAAGGACGCCCTCCTCCTCGCGCTCGCCGACGGNCACCACGCCGCCACCCGTCTCACGTCTCCGCTCGACGTCGCCCTGAAGCTCACCGGTTACAAATCCTTCTCCGACCTCTCCCCCGTGCTCCAGT



gi|88344891|gb|CI625737.1|CI625737 CI625737 Oryza sativa (japonica cultivar-group) seed Oryza sativa Japonica Group cDNA clone J

TTGAGCCGTGCCAATATCA
||||||||.|||| ||| |
AACTCGGCGCGGT-ATATT

EST sequence (targeted fragment marked with yellow):
GATCGGGTAATCAAGAAACAGTTTAACAAGATCCCAAGAGCTGGCTGGCAAATTGATCCTTTTGGTCATTCTGCAGTTCAAGGTTATTTGCTTGGGGCAGAGCTTGGTTTCGATTCTATGCATTTTGCGAGAATCGATTACCAAGATAGAGCAAAGCGTAAAGGAGACAAAGGCCTAGAGGTTATATGGCGCGGCTCAAGAACATTTGGTTCATCTTCTCAGATCTTCACAAATGCATTTCCTGTCCATTATAGCCCTCCAGATGGCTTCGGCTTCGAAATTTTCGATGATTTTGTACCTGTACAGGATGACATGTTGCTGTCTGACTACAATCTTAAAGAACGTGTGAATGATTTTGTTGCTGCAGCCTTAAAACAGGCAAATGTTACGCGCCA



gi|88692682|gb|CI736257.1|CI736257 CI736257 Oryza sativa (japonica cultivar-group) after pollination embryo Oryza sativa Japonic

TTGAGCCGTGCCAATATCA
||||||| |||||.||||
CACTCGGCTCGGTTGTAGT

EST sequence (targeted fragment marked with yellow):
ATCCCTAAGTCCATTCCTTCACCACACCTCTGCTCGCCTCCTTCTCCATCTCTCTCTAAGCTGCATGCCTTCCATTGGAGACAAGGGAGAGAACCATTGCATGTCCATCGTCCATGCATCTGCATATGCATGGTGTTGTTCTTCTCGTCTACCTCCTGCTTCTACATGTGACGGAGAAGAAGGGAATGAAATGGTAGCTATGATGTTGGCTCGGCTCACTCAGACGGCATTGGCGTGATGCAAAGCATGCATGCGTGCTTGCTACCTCACTTGTGTTTCTGATTGAGCCGTGCCAATATCTTAGTGCTCTTTCATGTGTACGTACGCGCACGCACGGTTGCACCATGCATCGACGACGACCACTGCCATGGCCGCCGGTA



gi|58657192|gb|CK045872.1|CK045872 44230rsiceh_12912.y1 Oryza sativa cv. PA64s panicle ferile cDNA library Oryza sativa Indica G

TTGAGCCGTGCCAATATCA
||||||||.|||||||||
AACTCGGCGCGGTTATAGA

EST sequence (targeted fragment marked with yellow):
GCACGAGGGCCTGATGACATCTACCTCGCCGTACCAGCTACGCCTGCGGCGGCGGCGGCGCAGGGGCTCCCGTTTTCACCACTACATGCCTCGGTTCCGTTCCAGCTCCAGCCTTCGCCGCCACCGACTCGCGGGGCGATGAAGACGACGGCTGCGGAGGCCGCGCAGCAGCAGTTGCTGGACGAACTGGCAGCGGCGGCAAAGGCAACCGAGGGTGGCAATTCCGTCGGCGCGCGCGAGATATTGGCGCGGCTCAATCAACAGCTCCCCCCTCTTGGGAAGCCCTTCCTCCGCTCCGCCTCCTACCTCAGGGAGGCCCTCCTCCTCGCACTCGCTGACAGCCACCATGGCGTCTCCAGCGTCACCACGCCGCTCGACGTTGCCCTCAAGCTCGCGGCCTACAAGTCGTTCTCCGACCTGTCGCCCGTGCTCCAGTTTGCAAACTTCACGGCAACTCAGGCACTTCTTGATGAAATTGGTGGCACCGCAACTTCCTGCATACATGTCATTGACTTCGATCTCGGTGTTGGCGGTCAGTGGGCTTCCTTCT



gi|29626323|gb|CB631334.1|CB631334 OSIIEb08M18.f OSIIEb Oryza sativa Indica Group cDNA clone OSIIEb08M18 5', mRNA sequence

TTGAGCCGTGCCAATATCA
||||||| ||||| .|||
AACTCGGGACGGTCGTAGA

EST sequence (targeted fragment marked with yellow):
GCGACGAGGAGTTCCCGAGGGAGATGCTGGCAGGGCTCAACCCGGTGGTGATCAAGCGGCTGGAGGTGTTTCCTCCAAACAAGAGCAAGATAACCACGGACGATATCATGACCCAGATTGGAGGTCTGACCATTCAACAGGCGATGGAGCAGAAACGGATGTACATCCTGGACCACCACGACTACCTGATGCCATACCTCCGGCGGATAAACACGGAGGGGGTGTGCGTGTACGCGTCGCGCACGCTGCTCTTCCTCAGGGACGACGGCGCCCTCCGGCCCGTCGCCATCGAGCTCAGCTTGCCCGACGGCGGCGTCGGCGGCAGCGAGATCAGCAGGGTGTTCCTCCCGGCGAGCCAGGGCACCGATGCGCACCTTTGGCACCTCGCCAAGACTCATGTCGCCGTCAACGATTCTGGGTACCATCAGCTCATCAGCCACTGGCTGTTCACGCACGCGACAGTGGAGCCGTTCATCATCGCGACAAGGAGGCAGCTGAGCGCGATGCACCCGATCCACAAGCTCCTGGACCCGCACTTCAAGGACAACATGCAGATCAACACCTTGGCCAGGAGCATACTGCTCAACGCCGGTGGCCTCCTGGAGAAGACCATGTACCCGGGGAAGTACTCCATGGAGATGTCCTCCGATATCTATGCCCATTGGAGGTTCACCGAGCAGTCCCTGCCTAATGATCTCATCAAGAGGGGGATGGCGTCCAGGGACCCCAAGGCGCGCGGCGGCGTGTCCCTCCACATCGAGGACTACCCGTACGCCGTCGACGGCATCGACGTGTGGCTCGCCAT



gi|117235958|gb|CT849047.1|CT849047 CT849047 Oryza sativa (indica cultivar-group) cv. Guang Lu Ai 4 Oryza sativa Indica Group cD

TTGAGCCGTGCCAATATCA
||||.||.||||||.|||
AACTTGGTACGGTTGTAGC

EST sequence (targeted fragment marked with yellow):
AACAACATGAATGAACATTTTCAGCCATCTCTTGATCAGTTTACACTTGCGGAGCTGTTGGGCAAACCATTTATATGAGAGGATATGATCTGGTTGCATCCAAGCGTTTTTCTTGGGCTGGGAGAGTGCGATGTTGGCATGGTTCAATCAAACCGGGCAAACTTATGCACTAGCTAAGCAAGATGCAGGGATACGCAGTATGGTTTTGTTTGGTCTGATTGAGCCGTGCCAATATCACAAGCTTGCCTGGCTTAATTACATGTAGTAGTGTGAGGATATTGGATTCTTCCACAAGGTATGAGAATTGTCATGTTGTGTATTTGTGCTCCTTTATGCGTGTTATTTCACATGCCTGCCTATTAGATTTAAGTTTCTTTATGTTGTTTCATGCAAAGCTTTCAGAAACTATTTTGTCTGACGGTTCAAGCTTTACAGATTTAAGTTTTGCTGCTGGTACTAGCTGGTCAAATGGCACTAAAAGGTTTAAAACCATGTGAATATTTATGAATATCAATGTAGTAGTAACATAAATCTTACTCTTATCAAAGAAAAATCCCTCATCAGCAGCACACTAATCCTGACGTGTACGCAACCAAACAAGCCCTGCTTCTGTTCTTCCTCTTCTTCTTTTTCACACTGTTTTTCAGTTGAGTAGTTATCTTTCATGCATGCTTTGGTGTAGATTGAGATGTCCAACTTGATGTGATGATCTGGAAAAGAAGAAGCAATCTGAAGGTTGTCCAACTTAAGGTTTGATGCCTTAGATCAAATGGCCCAGCATCTGTACCTAACCCAGATGATATGACCTAAAACCTGCACGAGCTGTCTGAATGTCTGATCGAGAAGCA



gi|89183479|gb|CI046044.1|CI046044 CI046044 Oryza sativa (japonica cultivar-group) callus Oryza sativa Japonica Group cDNA clone

TTGAGCCGTGCCAATATCA
|.||||||.|||| .| ||
AGCTCGGCGCGGTGGTCGT

EST sequence (targeted fragment marked with yellow):
AATTTAAACTACACTTGGATTAAAACCGGAGGTAGTACATTAATACAACACAAATCGCAGACACGAGTACGATCGAGAGAGTAAAGGTAGCACAGTATAGCTAGCTAGCGAGGGTGTAGTATAGTAGCCTCCGCCATTGACGACGACGACGAAGCTTTGCTAGCTGCTGCTTCGTTTGTTCAGTTCAGGCGCCGTAGAGCGGGGGGCACTTGAAGCCGGGAGGCGGGTGCTTGCCGCGGGTGATGAGCAGCTCGAGCGCGACGGGGAGGTAGATGTTGATGTTGAGGAGGCGCGCGCGGATGGTGGTGAGCGCCGCAGCCATAGATGCTGGTGGCGCGGCTCGACGTTGCACGGTCCAGTAGGCCAACAGTGCTCGAGGAATTCCGCAGCTTTTAGAGCAGAAGTAACACTTCCGTACAGGCCTAGAAGTAAAGGCAACATCCACTGAGGAGCAGTTCTTTGATTTGCACCACCACCGGATCCGGGACCTGAAATAAAAGACAAAAAGACTAAACTTACCAGTTAACTTTCTGGTTTTTCAGAGCTTGGATCTGTAACGGCGCAGAACAGAAAACGAAACAAAGAC



gi|29624378|gb|CB629389.1|CB629389 OSIIEb05J08.r OSIIEb Oryza sativa Indica Group cDNA clone OSIIEb05J08 3', mRNA sequence

TTGAGCCGTGCCAATATCA
||||.|||||| ||||||
AACTTGGCACGATTATAGA

EST sequence (targeted fragment marked with yellow):
TGAGAGAGCTTCCAAAAAAAGCTGGTGAACAACTAGTTATCCTATCTCAGGTTCTCATGGATGATATTAATGTTGGTTATGAAAGGCTCGCTGAACTACAGGTAAAAAGGGTGAACGGTGTGGAAGTAGAAAATCTGAAGCATCTGTGCAGCCTTGTGGAAAGCTGCACTGAAGAAAACCTGAGATTTGATCTGGACGATGAGCGGGTGATCGTCCTGAAATATCAGAACGCAAAGCTCGCCACGTCCCGGATCTTAAAACGGCACAGGATACCGTCGGCCATATCTGCTGACCTCGTCGACGAACAGGCGACTGACGACGGTGAGGAGGCGACTAATGGTGAGATCGAGGCATCATGCACTAGCTAACATTGTTTTGCATACTTAGCTAGGCAATTACCTGTGGAAGAATAGATAGATATTAGCACGGTTCAATTTCCAGAGACAGACGCAGTGAGGCGAGGACTGCCCGGAGCACTGCGCTGGTTGCAGCGGCTCCTGTTCGGCCGTCTCAGTTTTGACGTGAGGGGTGGGTGCTCCGGTTTCCCTCAGCAAATAAGAAGTGAAGAACCCAAGTTCTTCAGCCTCATGATATGTTGTAACACAAATTATCTTCCCCATTTCTTCCCAATATTTCTCATTCTTTCACCAAAAGTGCCGTGGCAGTCACCTCATGTTGAACTCAGATTATATATATCATCACGAAACAGAGCATGGAAACAGGAGTTACAAAGTTTACAGCTCGATGAAAAAAAG



gi|29644918|gb|CB649925.1|CB649925 OSJNEb14C02.f OSJNEb Oryza sativa Japonica Group cDNA clone OSJNEb14C02 5', mRNA sequence

TTGAGCCGTGCCAATATCA
||||||||.|||| ||| |
AACTCGGCGCGGT-ATATT

EST sequence (targeted fragment marked with yellow):
CCCATCTTCTGATGCTTCCTCCTAGTTTCTAACGCATCGATCACTTCCGACACGACATGGCGTCGTCGTCGTCGGCGCTGGTGGTGGTGGTGGCGGTTCTTGCGTTGGCGGAGGCGGCGGTGGCGTTCTCGGGGTACAACACGAGCGCCGGGGCGGTGGCCGGGAAGCTGAACGTGCACCTGGTGCCGCACTCCCACGACGACGTCGGGTGGCTCAAGACCATCGACCAGTACTTCGTCGGCACCAACAACTCCATCCAGGGCGCGTGCGTGATGAACACGCTCGACTCCGTGGTGGACGCGCTCATCCTGGACCCCGCGCGCAAGTTCGTCTTCGCAGAGCAGGCTTTCTTCCAAAGATGGTGGGCAGAGAAAAGCCCAAAAATCCAGGCCATAGTCCACAAGCTAGTTGATTCTGGTCAGCTAGAGTTCATAAATGGTGGGTGGTGTATGCATGATGAAGCCGCCGTCCATTATATTGACATGATTGATCAGACCACACTTGGTCATCGGGTAATCAAGAAACAGTTTAACAAGATCCCAAGAGCTGGCTGGCAAATTGATCCTTTTGGTCATTCTGCAGTTCAAGGTTATTTGCTTGGGGCAGAGCTTGGTTTCGATTCTATGCATTTTGCGAGAATCGATTACCAAGATAGAGCAAAGCAAAGGAGACAAAGGCCTAGAGGTTATATGGCGCGGCTCAAGAACATTTGGTTCATCTTCTCAGATCTTCACAAATGCATTTCCTGTCCATTATAGCCCTCCAGATGGCTTCCGCTTCGAAATTTTCCATGATTTTGTACCTGT



gi|117245023|gb|CT843301.1|CT843301 CT843301 Oryza sativa (indica cultivar-group) cv. Guang Lu Ai 4 Oryza sativa Indica Group cD

TTGAGCCGTGCCAATATCA
||||||||.|||| ||| |
AACTCGGCGCGGT-ATATT

EST sequence (targeted fragment marked with yellow):
GAAGCTTCGCTTTCGAAAAATTTACATTATTATTTTTGCTAATCAGGACTAAATAATGGAGAAGGAAAGGACTTTTCAAAAACAACCGACCATACTTTTTGAACAAGAAGTCGGCGCTCCGAGGCAAAGAGAGCAAGGCCGAGCGATACACCAGAAATGTTGGTCTAGGTTTCAAGACTCCTCGAGATGCAATTGAGGGCACATACATCGACAAGAAGTGTCCATTCACCGGCAACGTCTCGATCCGAGGTCGTATTCTTACCGGCGTCGTCATTAAGAACAAGATGATGCGCACGATCGTCATCCGACGTGACTATTTGCACTATGTCCGCAAATACAACCGTTTCGAGAAGCGACACAAGAACATCTCGGTTCACTGCAGTCCATGCTTCAGAGACGTCCGACTCGGTGATATTGCCACCGTAGGCGAATGCCGACCTCTCAGCAAGACCGTTCGCTTCAACGTGTTGAAAGTTTCGGGCGGAACTGGATCGAAGAAGCAGTTCCGAAAGTTCTAAACTAGAAGATGAATGGAAAAAATAATCAAATTTTTATTAATTTGTTCGTCTTTGTGTAATAACTAATAAATTAATAAAAATTGAAGATGTTTTTTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACCGATCTTGTAGGCCTTCCAGGCCAGTCGAGACGACGAGACACCGATCTTGTCTCTTCTCCGGCCGCCGGGCCGCCCTCCGCTTCGTAACTTCCGGCCACCGGCCTCCGCCCCGTGACCTCCTCCTCATCCTCATCCTCCTCGTGGAAACCACCACCCCCATCTTCTGATGCTTCCTCCTAGTTTCTAACGCATCGATCACTTCCGACACGACATGGCGTCGTCGTCGTCGGCGCTGGTGGTGGTGGTGGCGGTTCTTGCGTTGGCGGAGGCGGCGGTGGCGTTCTCGGGGTACAACACGAGCGCCGGGGCGGTGGCCGGGAAGCTGAACGTGCACCTGGTGCCGCACTCCCACGACGACGTCGGGTGGCTCAAGACCATCGACCAGTACTTCGTCGGCACCAACAACTCCATCCAGGGCGCGTGCGTGATGAACACGCTCGACTCCGTGGTGGACGCGCTCATCCTGGACCCCGCGCGCAAGTTCGTCTTCGCAGAGCAGGCTTTCTTCCAAAGATGGTGGGCAGAGAAAAGCCCAAAAATCCAGGCCATAGTCCACAAGCTAGTTGATTCTGGTCAGCTAGAGTTCATAAATGGTGGGTGGTGTATGCATGATGAAGCCGCCGTCCATTATATTGACATGATTGATCAGACCACACTTGGTCATCGGGTAATCAAGAAACAGTTTAACAAGATCCCAAGAGCTGGCTGGCAAATTGATCCTTTTGGTCATTCTGCAGTTCAAGGTTATTTGCTTGGGGCAGAGCTTGGTTTCGATTCTATGCATTTTGCGAGAATCGATTACCAAGATAGAGCAAAGCGTAAAGGAGACAAGGCCTAGAGGTTATATGGCGCGGCTCAAGAACATTTGGTTCATCTTCTCAGATCTTCACAAATGCATTTC



gi|88385620|gb|CI566482.1|CI566482 CI566482 Oryza sativa (japonica cultivar-group) shoot Oryza sativa Japonica Group cDNA clone

TTGAGCCGTGCCAATATCA
||||||.|||||| || |
CACTCGGTACGGTTTTACT

EST sequence (targeted fragment marked with yellow):
GGTGTGCACACCGAACGTTAGAGGCCAGGAAAAAGGTAGAAAAAAACAGAAGAAAGTTAGCCCTAGAAGCCACAACTAGCTTAACAAGAGCTAGTGTATCATTTTGTGTAGGCAATCTCCATCTTGCAAGTGATCAGGACAAGGAGATCTAAGCAGCAAACCTCTCTCTGTCTCTCTTGTCTTTCTCTTTCTCACATGCATCAGCCTTTCATTTTGGCATGGCTCACTTGGAGTTGCATTGCACATCTGTCCATTTTCTTGATGCTTCAAAAGCAATGGGGATCATTCATCTCCATGGATTGGAGCATATGCAAAAGTAGCTTGAGAAAAGGAAGGAGGGGCATGTGAGCAGTGTAGTTTTAGCATTGTGGGTCTCCCCTATAGTTGTCTTAGGTTGGTGAGGTTGATGGGAGAAACTAAATCTACCCCCATAGTT



gi|88220532|gb|CI220092.1|CI220092 CI220092 Oryza sativa (japonica cultivar-group) Panicles mixture of one, two, three weeks aft

TTGAGCCGTGCCAATATCA
|||||| ||||| ||.||
AACTCGACACGGACATGGT

EST sequence (targeted fragment marked with yellow):
TGAATTGAACACTTGGACTTCTCTATTTACCAGACCAGACGAGACAAACCAATTATCCGTGCACAGTACGGCAGCTGGAGAATACATAGTACATACACAATCTAGTACTACATACATTTGGTACAGGCACAGCTCAAGCAAGCGTGCATCATTCGAGATCCTGCATGCAACGCAGCAAGCAGCTTAGAAAATAAAAGCTCTCAACTCATCTCATGTGATGTGCCCACAGTTTTTGCAAACTTGACAGGCAACATGGCAGACAACAATATCAGCCAGCCAGAGCCTCACTACAGATCTGGCTGGAACCCAACAACAAACAGATCCGTTTCCAGTCCAGGACCAGAGTCACCGCTATTCATTCATTCATTCATTGCCTCTTGGTTGGATACATTGAAGCCCACATGTTACATACTGCCAGCTGCCCCCACACAAACAGTTACCAAATTCATCTATAATATGTCCATACAATTGACCGATTGATTATGAAAACATGCTTCTCAGTAACCGAGCAAAAAAACTCTGGCATTGCCATTGTGCT



gi|89185556|gb|CI052082.1|CI052082 CI052082 Oryza sativa (japonica cultivar-group) cold treated callus Oryza sativa Japonica Gro

TTGAGCCGTGCCAATATCA
|||||||.||||||||
AACTCGGTACGGTTATCCC

EST sequence (targeted fragment marked with yellow):
TTTTTTTTGTCAACCAAACTGTTATGGCATCTGTTTATCTATCATTTTAGACAACAGTGATATACTCAAGCAACTCCGATGACAACAGTGATAAAAGGAAGGACAAATTGGAATTTCATGATATTTGATGTCGGTCAAAGGCACTCTGTGCTGCCTGTAGTGAGTACAAACAGCCAGGACATTTCCCCTGGTGTTTGATTTTGAAGGACAAGTGAAGAATCAAGATACCCTATTGGCATGGCTCAAGAAGGAGAGTCTTCTCTTAGCAGCCTTTGATCTATAACACCACACTTCAAACGCCTCCGTCAAGTCTGGATACTTAGCATGCTTCGACTGAAGCCAATCTGACAAAATGTCAGCTTGACTGTTCGACGGTAGCGTTAGCACAATTGAAACAATAGCTGATTCCAGGCTCTGCCAGACCTCACTGTCTAGGTTGATCTTAGGTGCTTCAGCATCACCGTCATCGTCATCGTGTTCGGGATGTCCGACCAAAGGCTTTGTTCTCCTTGCAAAGCCAATCCAAACATTGACAGCATCACAACGTTTCTCGGTTGGGAGAACAATGTTGC



gi|66930628|gb|CX117476.1|CX117476 EI109K19 A normalized whole-life-cycle cDNA library of rice Oryza sativa Indica Group cDNA cl

TTGAGCCGTGCCAATATCA
.||||||.||||| .|||
GACTCGGTACGGTGGTAGG

EST sequence (targeted fragment marked with yellow):
GTGACGTGAACCTGTGATCGGACCCTACCGTGGTGTATTGAAGCAACGGATGGTGGAGAGAAGATGGAGACGATACGTAATTGTGGTTTCACGTAGCGACACGAGTAGACGAGATAGCGATGTATGATGTGTAGTGACGTGTAGTGGGTATAGATAGGCGAGAGATGGCAGAACAGAAATGAACGACACAGCAGAGATACAGAAAGACGCAGTCGACTCAGGCGAAATCGCACACTACACTACCTTGTCAACGCTAGTACACATTAATGAGACTATACAGACATATCTACATCGACTATCGATATCTAATTATGATTACACGAAGTATATAGACACAACAAGCACACGATAGGAGTGAAGTGACACTAGACAGACATCGTGATGCACTTAATCTATACAATAATATATAGTAGTAGATTTATGTGCGCACGTCGAAGGTGAGAGCGGAGAAGGTAAGTGGAGTGTATGGATTATAAGCTTGTTTGTGAATTATACGATGACATAAACACCAATCCATACAGACAACCAACACAGAACTACGTGGTGTGTGTATACCATCGACTACAATGAGCCTGAGGTCACATCGCATACAGCAAACAGACAAATCACTCACCAGGCGAACACTAGACACACAAGTCTATATGCTGCTACATGCAACATGCATCTCCTCGAGTCGATTGCATCAATCACTGCACTCACACATCAACATCCACTCCTCGCCACATGAGTGTGTGTTGTATGTTGACAGGGTGTCAGTAAGCACTCTCTGAATCTCTAGCTGATGCTGTGCCTGCTCATCGCACTGATCATATCTCTTGTCCAGTCGACGGAGTCGGCGTTGTGTGACTGCGCGCGATCAGGCCATACTCACACTGAGGTTGTGTGCTGTTCCTCGTGCAGAAGACGTCCGACCAGCTACTGGATGTGACGTGCGACTACGCAAGCTGTACTAGTAGTATACAGTGTGCGTCGACAGTACGATCACAATCGAGCAGGTCCATTCGCGATACTACGTATGCGAGCGCGCTGTAGATACAATGTCTCTCGCGTCTCTGCACCATCCGTCCATCTACTTATGTCCCGACCTGCGCGGCTCAGCATAGCGTGTCTGTGCGCAGGGTGGGATGGTGGCATGGCTCAGTCATTCG



gi|86889013|gb|CI314629.1|CI314629 CI314629 Oryza sativa (japonica cultivar-group) shoot Oryza sativa Japonica Group cDNA clone

TTGAGCCGTGCCAATATCA
||||||||||| ||| |||
AACTCGGCACGTTTA-AGT

EST sequence (targeted fragment marked with yellow):
CGCCAAGGAAGCGTGACTTCCATCTCTGTTAACTTGTACCTTACACAATTGAAACATACAAAGATAACGAGATAAATCCTGCACATCCTCCATGTTCTAACTTTCTATCAGCTGCTCAAAATTAAATGATGGAATGAAACATTACTGCATCACATATGAGCCCTGCCTGCTCTAACACTCATGTGATGGAAGATATGCCAAAGTTTTGCAGCCATTAACTTTAAGTTCTAACCAATTTTGTGCAGCAGTTACACTACATGAATTTGCACGGCTCAAATGTTCTTGTAAGATAGATGGCTGACCTGCATTTTGTCTAATATCTGAGAGCATTTTGATGTTTACATGCAACGCAGTTCAAACCAAGTACAAAACTAGAAAGCAAAATGAGTCTAATAGTCAAGCGTCAAGTCTGGTGCGGCGCATTACTCCTCTGGAACATACAAAACTTACGCCATCTCTTTCGCCGTGCTCTCAGGGCACTGAATGATAGAAA



gi|218479624|gb|FG945755.1|FG945755 MA_93-11_02650 Mature embryo cDNA Library of 93-11 Oryza sativa Indica Group cDNA 5', mRNA s

TTGAGCCGTGCCAATATCA
||.|.|||||||| ||. |
AATTTGGCACGGTAATGTT

EST sequence (targeted fragment marked with yellow):
GCGGCGCTCTAAACTAGTGGATCCCCCGGGCTGCAGGTTTTTTTTTACGAAGTGGTATATCTCAGATAACAGTGGATTTGTAATGGCACGGTTTAAATTTTGTGAATTGTGATGGTATATTTGAAAACTAAAGACAATTTGTGTAC



gi|44676460|gb|CR289894.1|CR289894 CR289894 Oryza sativa library (Han B) Oryza sativa cDNA clone y715c01p5, mRNA sequence

TTGAGCCGTGCCAATATCA
|||.||||||||| ||||
TACTTGGCACGGTTTTAGT

EST sequence (targeted fragment marked with yellow):
TGACGGGACCCGCTCGACGGTATTTGACTGCGCGCACGCCGCTGGCACCGCCGGCCGCCGCACCGCCCGACCGGGGTGGCACTCCGCACTGTGTGGACGGCAACCTCGAGGCCGCGTTCGCGGTGACTTCGGGAACTCGTTGCCACCTTCCCGTCCGTCGCACTGGCCACGACGTTCCCGGGCGTCGTCTTGCAGGCCTGCTCGTGGCACGTTCCAAGTCCCAACGCCGCATTTCCAACTCACGCACACGCTCCAAAGCCGAACGTCTGCAGATTGCTGCAAGCTATATCCCCAGCTTGTGTTTCAACCCTTCGTCGCAATCGCAGCATGGTTGGTGCTCCCTGTCTGCTTTGTGACACCGAAGTGGTCGGACACTTTGGTGATTTTGGCACGGTTCATATATTATCGTTGGATTATCGATTCCTCCGTGATGCTGAAAAATCCGGATTGCTTGAAAAGAATTCGCAATATGGAAATTTGGAATCCTGGAAGGCAGGATGGGTACTTTGACGTATCAGAGCCTGTTAAACATCCGGGAGTGTATAGGGAGACTTGGATTGTCTTCGAACCGGAGTTGCGAGCTTTAAGGCTTGGGTCAATTGGTTCGATCAGGAGGTGATTTGATGCATGCAAGCTCTTGCAGAGGTTCAGGGTGGTGGTTTAACGTTGTCTCATAAAAGAGGATTAAGGAAGTTATGGGACTAAAGTTGCGTTACAGGGTGGTGATCATCCGTTGTACTTTCATCTGGGCAAGAAGCGTGGATATTACCGGAGTTCTTATGAACACTCAATCAGGGCAGTATATATGAGACCGCAGAGGGTGTTGTGAATTTAGGGTAGTGTGTATGAGAGATATTGGAAGAA



gi|29620989|gb|CB626000.1|CB626000 OSIIEa15P02.f OSIIEa Oryza sativa Indica Group cDNA clone OSIIEa15P02 5', mRNA sequence

TTGAGCCGTGCCAATATCA
.||||||.||||| || ||
GACTCGGTACGGTCATTGT

EST sequence (targeted fragment marked with yellow):
TTAATGCAGGTTTGAATTTCAGGGAAAAGCCAAAGATACCCTTACTGTAATTGAGGCACCACGCCAATCTGATTTGTTGATTGAGTTGATCAGGAAACTGAAGCCTCAGGTGCCTGTTACTGGCATGGCTCAGTTTGAGGCTATCACAAGTGCTGCTTTTGAGAACTTATTAAGTGTAACGAAGGATGTTGGTTCTCGGTTATTCATCGATATTTCAGAGCATCTGGAGTTGTCTAGTTTGCCAAGCTCTAATGGTGTATTAAAATACCTTGCTGGAAAGACCCTACCTTCCCATGCAGCTATACTATGCGGTTTAGTAAAGAATCAGGTTTATTCTGATCTGGAGGTTGCTTTTGCCATTTCTGAAGATGCAGCTGTTTATAGGGCATTATCACAAACTATTGAGCTATTGGAAGGGCATACGTCTCAGATCAGCCAGCACTATTATGGTTGTCTTTTCCATGAGCTACTGGCATTTCAAATTGCTGATCGGCATCCACAACAAGAAGTAAACATGACTTGTCTCTTATTCTTAATCTCACGCATCCTTATGGTGATCTTGGATATGTAATGGCAGAAACCAGCTACTTCTTAATTTATGAATTGGTCTTCCTTTGTTGGATAAAACACACTATAGTAAACAGCTAAATTTTTTAGAAGAGTTTGATGTGTTTTTTACTTATTTTATCTTATGTCTAATTATAAGCGAAGTTAATAATTTTCCAGTGGACTATTTTTGTGAACTTAAAGTATCTTTTTTGGTTTGTGGTCTTTATTTTTTTTTCTTGCTC



gi|66921576|gb|CX108424.1|CX108424 BI149A05 A normalized whole-life-cycle cDNA library of rice Oryza sativa Indica Group cDNA cl

TTGAGCCGTGCCAATATCA
|| |||||||||| ||||
AAATCGGCACGGTCATAGC

EST sequence (targeted fragment marked with yellow):
TCGTATTTTTCTCCTCCTTCGACTTCGATTTTTCGAACTCCCCCGAACACGACGCCGACGAGAAGGAGTCGAGGAGGCTTCGAATCCGCCGCCGCCGCCACCGCCGCCGCCGCCACCGCCGCCGCCGACGAGATGTCCTCCCCGGCAGAGTACTACAACTCACTTCCACCAATAAGCAAGGCATATGGAACATTGTGTTTCTTTGCCACTGTACTGTGCCAGCTCCAGATACTGAATCCACCCTTTTCTTGGCCTTATANCTATNNCCCTTTGTGTTCACAGAAATTTCACGATACTGGCACGGCTAAATTTACAAGNCCTTCTTTTTCCCCTGGGCAAGCTTTTCCTAATTCAACTTTGCGGAATTCCGCCCTNNTCTGACTGCATAGCAACGATACNNGGCGTGCNNAGTTACGACAACAGGGTTGCATTTTTGCACAAAGCGCCCACAGCTGCATTTCCTTGCTGGACTGCATGACTACTTNGCGTGCCCCATATCACTTNGGCTGGCATTTGCTCAGGCTTATTTCCCCCTNTCCTTGGCGATTACTTCTAATTTCCCTTGGGGGAACGTTACCCCAA



gi|66923159|gb|CX110007.1|CX110007 EI007J04 A normalized whole-life-cycle cDNA library of rice Oryza sativa Indica Group cDNA cl

TTGAGCCGTGCCAATATCA
||||||||||||| .|||
AACTCGGCACGGTGGTAGA

EST sequence (targeted fragment marked with yellow):
CAGATGCATCAGGACAAGTAGCTGATATCTTGGAGCTTGTTGAAGAGGAAACTTCAGAAGATGCATCAGGACAAGTAGCTAGTATCTTGGAGGTTGTTGAAGAGGAAACTCCAAAAGCACCTGGTAAAGACCTTTGTAATGGTGGCATTCCTGGGTCTGGACTACAAAACAAAATGCACAATGCTCAAGATGGTGGCACGGCTCAAGGCAGTGATATGTGCAATGGCGGAAATACCTCAAGGCGTCTCAATGATCGCAAGAGTGTTATCGTTATCGACTCAGACAGCGATGAAGACGAGGATCCTCACCCAGAGCAACATGAACCAGAACGTGCTGCTCCTCGGGCAGCCATGGACGTGGTCATGGCTCCCACTCATGGTGCTTCGGTAGCCATGAATGGGACTAGTGCTCCCACT



gi|38471801|gb|CF955932.1|CF955932 4761rsiceb_7308.y1 Oryza sativa cv. PA64s leaf cDNA library Oryza sativa Indica Group cDNA 5'

TTGAGCCGTGCCAATATCA
.|| |||||||||| |||
GACACGGCACGGTTTTAGC

EST sequence (targeted fragment marked with yellow):
GCACGAGGAGAAGGAGAAGGGCGTGTTATCCGTTTGTTATCGGGCGCAGTGCAAATCCAAGTCCTGACAGTGAAGTGGAGCGTGCCATTGCTGCAGAAGATAAAGAATACAATGATATTTTGAGACTTGATCATGTTGAACGAAATGGCAGTCTTCCTTTGAAGATTCGGATGTTTCTGTCAACCGCTCTTTCCATTTGGGATGCTGATTTCTATGTGAAAGTTGATGACGATGTTCATGTCAACATAGGTATTACCAGGTCGATTTTGGCACGGCACAGATCAAAACCTCGGGTGTACATTGGCTGCATGAAATCTGGACCTGTTGTTGATAAAAATGAATCTAAGTATTATGAACCAGATCATTGGAAATTTGGGACTGAGGGTAACAACTACTTTAGGCATGCAACACG



gi|58609748|gb|CK037781.1|CK037781 36238rsiceg_5812.y1 Oryza sativa cv. 93-11 tillering whole plant cDNA library Oryza sativa cD

TTGAGCCGTGCCAATATCA
.||||||.||||| || ||
GACTCGGTACGGTCATTGT

EST sequence (targeted fragment marked with yellow):
GCACGAGGGTTACTTCTTTAGCAATTGAGGGAAAAGCCAAAGATACAGTTACTGTAATTGAGGCACCACGCCAATCTGATTTGTTGATTGAGTTGATCAGGAAACTGAAGCCTCAGGTGGTTGTTACTGGCATGGCTCAGTTTGAGGCTATCACAAGTGCTGCTTTTGAGAACTTATTAAGTGTAACGAAGGATGTTGGTTCTCGGTTATTCATCGATATTTCAGAGCATCTGGAGTTGTCTAGTTTGCCAAGCTCTAATGGTGTATTAAAATACCTTGCTGGAAAGACCCTACCTTCCCATGCAGCTATACTATGCGGTTTAGTAAAGAATCAGGTTTATTCTGATCTGGAGGTTGCTTTTGCCATTTCTGAAGATGCAGCTGTTTATAGGGCATTATCACAAACTATTGAGCTATTGGAAGGGCATACGTCTCAGATCAGCCAGCACTATTATGGTTGTCTTTTCCATGAGCTACTGGCATTTCAAATTGCTGATCGGCATCCACAACAAGAAAGACTGCCTGCAGAAGTGATACCTCAGAAGATG