miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse




mature miRNA: TTGTACTAGGATGTGTCACGT
species: Oryza sativa
database: miRNEST
The numbers on the right side of the alignments show a score calculated for them.
When calculating the score, a mismatch is given a score of 1, bulge: 2, and wobble: 0.5.

Predicted miRNA targets
gi|86872373|gb|CI341997.1|CI341997 CI341997 Oryza sativa (japonica cultivar-group) flower Oryza sativa Japonica Group cDNA clone

TTGTACTAGGATGTGTCACGT
||||| ||||||.||.|| .|
AACATTATCCTATACGGTATA

EST sequence (targeted fragment marked with yellow):
GAGGGGAACAGAAGATGAATAACTGAACAAGGAGTAATTTACATCGTAAAATGGGGAATGCCCCAAAGATACATGTAGAGTAGTATAAAATAATTAATTTTATGAATATGGTGGTCAAGGAAATGGAAAAAAGCTGTGCGCTAACCATCTGGGTTCCTAAACTCTTATTTCATACTCCCTCCGTCCCTTATAGATTTGGCTTGGATATGGCATATCCTATTACAATTGAATGTGGACATGCAGTTTGTCCAACTTCGCTTGTCTTACGATGTGTCAGCTCCCCCCCCCCAACTTCTTTATACTTTACTGG



gi|29636486|gb|CB641495.1|CB641495 OSJNEb01C18.r OSJNEb Oryza sativa Japonica Group cDNA clone OSJNEb01C18 3', mRNA sequence

TTGTACTAGGATGTGTCACGT
|||| ||||||||| |||.|
TACATAATCCTACACCGTGTA

EST sequence (targeted fragment marked with yellow):
GAGAAAAATCCCAGAGCTGAAGACGAAGGACATAAGGATTTGGACCTACAGAAAAACAACACCACCAAGAAGGACAAACCTGCTGCTGAACCAATAGTAGTCCCAATTGTGTTGAGGATGTCTGATTTTGATCACAAGGCATTGCTAGAGGAATGGACAGCCACCAGGGCTTCCAGGGATAATTGTCTTCCTCAGGATCATCGAAAGCTTATAAACACCCTTAAGCTTATTCAGGACTATCTTTGTTCTTTTGAGTCGCAGGGGTTGACCGTTGTTGACATTTCAGCGAACTCATTCCCTCAGACACTAGATTGGCTTCACAGCTATCTTTTTCAGTGCATCGAACGTGGCCTTTTGGCTGCATGTTCAGAAAGTCCCAAGCAAGGTGGGAGCTAACGGATACAGATGAGCGAGAGGGAAGCCCGCATTAGTCTTGCTTAACATATACTCACTCTGTTCCAAAATAAACCAACATTGTACGGATGTGCCACATCCTAATACATCTTGGACACAAGTACTAGTATGTGTCACATCGGGTTTATTTTGGGACAGAGGGAGTATGTCACATATATGATGCTTGTAAAATTGTGCTTTTAGTGGGTTGATAATCAGGAACTTGTGCGTTGCCGCCATCCATAAACGTTGGCAGTGGAAATGTAACCGAGTAGAGAACTCCATAGTTCGATAAAAACCTTTTAGAGCTGGAATAGGAAAAGGAAAATTAAAAAAAAAAGCTCAAAAAAGGGTTGCCACCC



gi|86490396|gb|CI133029.1|CI133029 CI133029 Oryza sativa (japonica cultivar-group) Panicles less than 5cm stage and Panicles two

TTGTACTAGGATGTGTCACGT
||.|||||||| | |||||.|
AATATGATCCTCCCCAGTGTA

EST sequence (targeted fragment marked with yellow):
TTTTTTTTTAAAGACGATGTCGCTTTTATTATTTTTGGCTATTGCGTGGAGGGTTGGAACCTTCCACTTTCGTATATAGTAAAAAGAAAAAAAATATTAACTGCATACTTTTTTTAAAAAAAACCCAACCTAAAAATGTGACCCCTCCTAGTATAATTCAGAATCGTTGTACTGGGAGAGGATTGGCTTTTTTGGGACGGAGAGAGTAGTAAGTTGCTCATCTTCTAGTCTACGTCTCCGGATTAATATCTTCCCGATTCATAATGCGACGAAGGGTTTCACCGGCCGGAGCTCGCCGCCGTTGAGGAAGTCGGAGTACCACCGTGCCGAGCTCCTGACGTACCTCGTCCTCGCCGGCGCGGTGAAGTCGACGCAGCACAGGCCAAAGCGGTTGCCGTAGCCGGAGAGGAACTCGAACCCGTCGAGCAGTGACCACACGAAGTATCCCCGCGTGTTCGATCCGTTCCGTATGGACAGGTGCAGAACTTCCAGGTAGCTCTGCAAGAAATCCGATCTAAAGTCGTCGTCGTAGTCGATCTTGCCCGGG



gi|89188746|gb|CI115995.1|CI115995 CI115995 Oryza sativa (japonica cultivar-group) supermix Oryza sativa Japonica Group cDNA clo

TTGTACTAGGATGTGTCACGT
||||| ||||||.||.|| .|
AACATTATCCTATACGGTATA

EST sequence (targeted fragment marked with yellow):
TTTTTTAATAACTGAACAAGGAGTAATTTACATCGTAAAATGGGGAATGCCCCAAAGATACATGTAGAGTAGTATAAAATAATTAAATTTATGAATATGGTGGTAAAGGAAATGGAACACAACCTGTGCGCTAACCATCTGGGTTCCTAAATCTTATTTTATACTCCCTCCGTCCCTTATAGATTTTGCTTGGATATGGCATATCCTATTACAACGAATGTGGACATGAAGTCTGTCCAAATTCGTTGTATTAGGATGTGTCACATTCAACCAAAATTCTTTATATTTAGGGGCGGAGGGAATACCAAGTTCCTAAATCTTATTTTATACCAAATATTAGAACTTACACTTGGACAAAAAAAATATATCATTGTCTGTTTTAACGAGTTCCTCTCATTCCAAAGATGACATAGTCATCCTCTACAAAAATTTTAAACAAAAATATAATTGAACTCATGTGACCAATATATTTTCCATCCATGAAGAACGATAAGTTCCAAAAATAACCAA



gi|88523834|gb|CI451695.1|CI451695 CI451695 Oryza sativa (japonica cultivar-group) whole body 1mM ACC(1-aminocyclopropane-1-carb

TTGTACTAGGATGTGTCACGT
| |||||||||| |||| |.|
ATCATGATCCTANACAGCGTA

EST sequence (targeted fragment marked with yellow):
GTTTGAAACATACATTAATTCTCCTTTATATTGCCACCACAAATTTTACAAAACCTATCCCTAATAATAACCAAGCCATCACACTAAGTAGATCAACTGTTAGGGCTCAAGATTAACCAGAAGATGATGATGATTTCGCCAGCAATTACCACTCCCTCCGTCCCATAAAAAACCAANACTCGATGCGACANATCCTAGTACTACGAATCTACACATATTTCTATCCACATTCGTTGTACTATAATGTGTCACATACAGAGGCTAGATTCACTTTTCGGACGGAGGGAGTACACCATATCCATGGCGTCGCCGCGTACAGCGTGTACTTGTCCCAAGACCGAGAGGAGGAACAACAAGGACACATGGTCCACCACGACACCGAATGCCTAGCGTTCCGCGACGGCCTCGA



gi|88717170|gb|CI740680.1|CI740680 CI740680 Oryza sativa (japonica cultivar-group) library (Kikuchi S) Oryza sativa Japonica Gro

TTGTACTAGGATGTGTCACGT
||||| |||||||||||||.|
AACATAATCCTACACAGTGTA

EST sequence (targeted fragment marked with yellow):
ATGTTCATCGAGTGAGAATTATGGAAGTAATAATACAATGATTACTTCAAAAAACCTCAACTCAGAAAAAAAAAGGAATGACACGAAACTACAAGTATGCCTACTCCCTTCCATCCCCAAGAAAAAAAGGCAACCTAGTACTAGAATGTGACACATCCTAATACAACGAATCTGGACATAGAGTATGTACAGATTCGTTGTACTAGGATGTGTCACGTCGTAGTACGAGGTTGAGTTTTTTTTGGAATAGAGGGAGTAGATATTTACCCNGTTCTAGACTGGTCTTATTAAACTTCTGGAGCACAAAAGCTTTGGGGTCCATTTGGCCAGGTGGACATCCAATTCCTGAATAAAAGTATGAATATCACATTAAGGAAA



gi|86862079|gb|CI330672.1|CI330672 CI330672 Oryza sativa (japonica cultivar-group) shoot Oryza sativa Japonica Group cDNA clone

TTGTACTAGGATGTGTCACGT
| ||||||||||||||| |.|
ATCATGATCCTACACAGCGTA

EST sequence (targeted fragment marked with yellow):
CGCTGTTGAATAATTGATTGTATAGGAAACACATATAACAATGATATAAATAACAGCTGTACAATGGAAACTGCAAGTGTGTGTGTACACAACTTGGCGGATGAAACCTACTTCAATTCTTCCCCATTTTGAAACATACATTAATTCTCCTTTATATTGCCACCAAAAATTTTACAAAACCTATCCCTAATAATAACCAACCCATCACACTAAGTAGATCAACTGTTAGGGCTCAAGATTAACCAGAAGATGATGATGATTTTGCCAGTAATTACCACTCCCTCCGTCCCATAAAAAACAACACTCGATGCGACACATCCTAGTACTACGAATCTACACATATTTCTATCCAGATTCGTTGTACTATAATGTGTCAAATACAGAGCTAGATTCACTTTTTGGACGGAGGGAGTAGACCATATCATGGCGTCCTCGCCTACAGCGTGTACTTCTCCCAAG



gi|29625197|gb|CB630208.1|CB630208 OSIIEb07A15.r OSIIEb Oryza sativa Indica Group cDNA clone OSIIEb07A15 3', mRNA sequence

TTGTACTAGGATGTGTCACGT
||||| |||||..||||||.|
AACATAATCCTGTACAGTGTA

EST sequence (targeted fragment marked with yellow):
ACTGGTGTAAATCACTTTATCTTATTCTTACATTCTAATGGTGTTCAGTTGATTGTTTCTTTTGAATGTCGGGCAAGCCACTACACTGCCTGAGCCAGAGATAAAAGCATATGATGTGCTCCGGTACATTCATGCTGTAAAGGACACATTCCCAGACCAGCCCTAGAAGCTTGATGAGTCATCATAATTTTGCTTCATTTCAAGAGCAAGAGGTGGAATTACTCACGTATGTCGGGTACAAAATACATGAACATCCATGTAAAGATCATTTTCAGTGGGTAACAAGCCCAAGTGCCCAACTAGTATATGGAAAAATAAATTATCCAAATCTATGGATCATATGCACGATCAAGACTTCTGAAACGCCCTTGGAGAGCAGCTGTCCAATTGAAGATATTAATCGATTGAAACTGGAAGGTTATAGATGTGCAAAACATCGGGTTCTACTTCCTCTGTCCCAAAAAAAGTGAATCTAGAACGGGATGTGACATGTCCTAATACAACGAATCTAAACAATCCCATCCAGTATTAGGTTGTTTTTTTTTTGAGACGGAGGGAATCCATTAGTGGTTTAGAGTGTGTTTGAGTTCCAAGAATGTGTATATACCCAAAATAATGTGTTTTCCCCTATGAGAATGTCTGATAAATAGTGTGCTTCCCCCTGAGTGTGTCTCAGTTGCAAGAATATGTACGCAAAATAATGTGTTCTCCACTAAATCACTAACGTGTGTCTGAGTTGCAAGAATATGTCCGCAAAAAAAAAAAAAAAAGAAAAAAACTCGAGGGGGGGCCCGGTACCCAGCTTTGTCCC



gi|88718726|gb|CI742236.1|CI742236 CI742236 Oryza sativa (japonica cultivar-group) library (Kikuchi S) Oryza sativa Japonica Gro

TTGTACTAGGATGTGTCACGT
|||||||| || .|||| |||
AACATGATACTTTACAGAGCA

EST sequence (targeted fragment marked with yellow):
TTATAAAAAAATACTATGTTCGTCTTAAAATATAAAAAACTAGGATAAGATAGAATACATCATATTACTACGTGTCTAGACATCCTAATACTACTACTATTTACATCATAGTATTACTACTGTTAATATTTATAGTATTAAAATATTTCTTATCCGATTCTAAGTTCTTACATTTTACGATGGAGAGTACCAGACATTACTCAACTATTCTATACATATCCCACTACCCTGTGAATCAAAAGCTACTCCATCCGTTCCATAATATAACAAATTAGAACCGGACGAGACATTTCATAGTACAACGAATTTGGACAGCTGGTCCTAGGTTGTTATATTATGGGATGGAGGGAGTA



gi|163929422|gb|EG713847.1|EG713847 Os6CPREST1708 6cm rice panicles Oryza sativa Japonica Group cDNA clone 6CPR-J3B03SA, mRNA se

TTGTACTAGGATGTGTCACGT
||||| |||||||||.|||.|
AACATAATCCTACACGGTGTA

EST sequence (targeted fragment marked with yellow):
GGAAGGCGAGATGCATGGCGGGTGGCGGGGTGAAGAAGGCGAGATGGAGGCCGGCGACTTTTTTTTCTTTTAGTTTTGTTCCCCTTATGCCTTATAGGTTCAGGTTCTAAAACCGGCACCTATAATTTCGGGTACAGGTGTCAACCGGCACCTATGGCCGATTCCCAACCGGCACCTATGAGGTTTTCTGTAATAGTGGCTGTCTCTTACTCCCTCCGTCGTCAAATATAAGGTTATTTGGCAGGATGTGGCACATCCTAATACAACAATCTGGGTAGAGAGTCTATCCAGATTCGTTGTACTATGATATGTCACATCCTGGCAAAAGCCCTTAATATGATGGACGGATGGTGTAAGGATTTAGCCTCCATCGCTGTAAAAGCTTATCATGGCAGCCGCCTAGGATTTCATCGCCATTGCTATTTATATTCATAGCTTGTCGCTGCAGCGCCGTTACAGGTTTGATGACAAGCGAGAGAAAGGAATGAGAATTAGAAC



gi|87034829|gb|CI189453.1|CI189453 CI189453 Oryza sativa (japonica cultivar-group) root of seedlings Oryza sativa Japonica Group

TTGTACTAGGATGTGTCACGT
||||| |||||||||||||.|
AACATAATCCTACACAGTGTA

EST sequence (targeted fragment marked with yellow):
CTCAATCCTATAAAAAACCAATGTACTAGATGTGACACATCCTAATACAACAAATCTGGACATACATATGTCCAAATCCATTATACAAAATATGTCACATCCAGTACTAGATTTACTTTTTTTTTTAATGGAGGGAGTAACTTCTAAAGATAAATTATCTAGGTTCGTCTCTAAAATTTACATTATCTTTTTTTTACAGGAGTACTAATACTAATCACTTCCGATTAGACCAGTCCAAACTCCAAAGTGCAAACTCCAAGAAGAACCCTAAAAGTACAGCTAGACGGCCAAGGAAGCAAACAAAAAAGGAGAGATCAGCAAAGAAAGCCGAGAAAACCTGGCACAGCCAGCCAGCCAGCTACCCATGACATACACATAAAAAAAAAGAAACAAAAGCAGCTTGAGATGTCTCTTCCTCTCCGATGGNCACCCAAAAGNCCCTCTCTTTTTCTCCCGGGACCCCCTCCTCCCCAGTCTCCAACTCCACCATTTGGCTCATCCAGCCATCGCCCACTTGGCTCTAGGTTCATCCCCAAATATTTTC



gi|86885380|gb|CI318531.1|CI318531 CI318531 Oryza sativa (japonica cultivar-group) shoot Oryza sativa Japonica Group cDNA clone

TTGTACTAGGATGTGTCACGT
||.||||||||| ||| ||.|
AATATGATCCTAAACAATGTA

EST sequence (targeted fragment marked with yellow):
AGACATTTGCATATAATTCACATTCATATCCTCGAGTAAAGAGCAAATGAGATATTGTTGGGACTCAGCGTGCCAGTCAACTTCAGCCTGAGATGTGCTCATCAAACCACACGAAGGTGGCGACCAGATGTGTTACACATCCCAGGAAACTTGACTAAATCGCTAGAGCTCTACAACATCTCAGATGCTCTAAACATTTACATATATATTGTAAGTCCAAATCCAAAACATTTGTACATACTCCCTCTGTCCCATAACATAAGGGATTTTGGGTGGATGTAACAAATCCTAGTATAATGAATCTGGACACACGGTCTGTCCAGATTCATTGTACTAGGACGTGTAAAATCCATAATTTATGCCTAAGCCATAAGTAATTACCATTTCCCACACACATATACCTACCTGGTTTTTCTCTTCTTAGTACTTGATTTCCTTCACTTTTTGGTCCTGAGGGGTAGGAGCAGAGGATTGCCCT



gi|29682678|gb|CB678953.1|CB678953 OSJNEf01N15.r OSJNEf Oryza sativa Japonica Group cDNA clone OSJNEf01N15 3', mRNA sequence

TTGTACTAGGATGTGTCACGT
||||| |||||||||||||.|
AACATAATCCTACACAGTGTA

EST sequence (targeted fragment marked with yellow):
ATTGATGACTTGGTGGTGCGACCTTCGCGTCGATCGGGTACTCGTGTCACTGTTGCGTGAAATTGATGAAATAAACAAGCAAATAAAATGATGGCGCCATTGCCATTGCCAATGCGGGGGCTTTGTCGTTGGCTTAGGATCGAGTAGCGATGTGATGGAATGAATTTCTATAAAATCGATGCACTCCAAATGCCGAGTGATTTGGCTATGATTTGAATTTGCGATAGATGAATAGATGATGGAGACATGGAGTTGAGCAGGGGAAAAAACTGGTTGAGCAGGTGGTCGCTATTGCCTGCTAGTACTCCCTCAGTCCCATAATACAAGGGATTATGGGTAGATGTGACACATCCTAATACAATGAATCTGGACGTCTCACATCTGTCCAAAATCCCTTATATTATGGGACGGAGGGAGTACTACTACCAATTGTTGACTTTGTGAATCTAATCAAGTTCAGAGAGCCAACTACAAGTATATGTCATGGGTAGTGGGCCGAGGGATCGAGGCCCTAAGGATAAGGATAGAGTTTGTTGGATAGAATTAGACTGGGTCCTCTCTCCATCTATATAAGGATGGATTGTATCATCATTCTAACTGATAATACCCCGCGTGTTGTTGCGGGACTCAATGATTATTGTAAGTGCAATAGGAAAATACAAAAGGTATCTTGCCCCC



gi|29615816|gb|CB620828.1|CB620828 OSIIEa06E16.f OSIIEa Oryza sativa Indica Group cDNA clone OSIIEa06E16 5', mRNA sequence

TTGTACTAGGATGTGTCACGT
| ||||||||||||||| |.|
ATCATGATCCTACACAGCGTA

EST sequence (targeted fragment marked with yellow):
CTTTTTTTGGCGGATGAAACCTACTTCAATTCTTCCCCATTTTGAAACATACATTAATTCTCCTTTATATTGCCACCAAAAATTTTACAAAACCTATCCCTAATAATAACCAAGCCATCACACTAAGTAGATCAACTGTTAGGGCTCAAGATTAACCAGAAGATGATGATGATTTTGGCAGTAATTATCACTCCCTCCATCCCATAAAAAACTAACACTCGATGCGACACATCCTAGTACTACGAATCTGGATATATTTCTGTTCAGATTCGTTGTACTATAATGTGTCACATCCAGAGCTGGATTCACTTTTTTTTTTTTTTTTTGGATGGAGGGAGTAAACCATATCCATGGCGTCGTCGCGTACAGCGTGTACTTCTCCCAAGAGCGAAAGGAGGAAAAAAAAGGAGAGATGGTCAGCTAGGACACCGAATGCCTCGTGTTCCGCGACGGCGTCGACCTCGTCTCCTCGCCGGGGCTCTCCGACGTGTCGGAACTGCTGTTCTCCCCGCTGCTTGCCTTGCCAAAACACAGCTTGCTCAGTATCTTCTTCGGGATTAGCCCGCCGCCGCCGCTCCCCTTTGCTGACGCCGACGACGGGGGCGGCTTCTTGCAGGCGGCCTGA



gi|163927386|gb|EG709914.1|EG709914 Os5MPREST1581 Rice young panicles Oryza sativa Japonica Group cDNA clone 5MPR-F2F09SA, mRNA

TTGTACTAGGATGTGTCACGT
||||| ||||| ||||| |.|
AACATTATCCTTCACAGGGTA

EST sequence (targeted fragment marked with yellow):
ATATAGCAATCTATAGTATTTGATTAGACAGCTAGTATTAGTACTTGTTGTATCTAATTCAGAATGGGACACTTCCTATTACAATGAACCTGGACATGTTGGTTATTTCTGTGACGGAGGGAGTACTTTGGAATGGAGGATGATTTACATCACATCAGAATAATATATTCCTCCGACTG



gi|88525419|gb|CI453422.1|CI453422 CI453422 Oryza sativa (japonica cultivar-group) whole body 1mM ACC(1-aminocyclopropane-1-carb

TTGTACTAGGATGTGTCACGT
| |||||||||||| || |.|
ATCATGATCCTACAAAGCGTA

EST sequence (targeted fragment marked with yellow):
GTTTGAAACATACATTAATTCTCCTTTATATTGCCACCAAAAATTTTACAAAACCTATCCCTAATAATAACCAAGCCATCACACTAAGTAGATCAACTGTTAGGGCTCAAGATTAACCAGAAGATGATGATGATTTTGCCAGTAATTACCACTCCCTCCGTCCCATAAAAAACCAACACTCGATGCGAAACATCCTAGTACTACGAATCTAGACATATTTCTATCCAGATTCGTTGTACTATAATGTGTCACATACAGAGCTAGATTCACTTTTTGGACGGAGGGAGTAGACCATATCCATGGCGTCGTCGCGTACAGCGTGTACTTCTCCCAAGAGCGAGAGGAGGAAGAAGAAGGAGAGATGGTCAGCTAGGACACCGAATGCCTCGTGTTCCGNGACGGCGTCGACCTCGTCTCCTCGCCGGGGCTCTCCGACGTGTCGGAGCTGCTGTTCTNGCCGCT



gi|89169134|gb|CI038641.1|CI038641 CI038641 Oryza sativa (japonica cultivar-group) etiolated shoot Oryza sativa Japonica Group c

TTGTACTAGGATGTGTCACGT
||.|||||||||.|||| |.|
AATATGATCCTATACAGGGTA

EST sequence (targeted fragment marked with yellow):
TTTTTTATACCGGCATGTCAGTGTGGTATCATCACAAGGTTCAAAACTAAAGACATTATTACACTGGTTTATTTTCAAATTATCACAGGCTCCAAACCTGATATGAAGCTAAACTTGTGAAGCTGGAAAAAGGTACTCCCTCCGTCCCAAAATATAGCAACCTAGTACTGGATGGGACATATCCTAGTATAACGAATGTGGACATACTAGGTTGCTATATTTTAGGACAGAGAGTATGTATTTTATAGGGCAGATCCACCCACTCCGGCTCCAGGCTCCAGCTCCTCGGACAAGATAGCGGTTGGAGCCATGTCAAACATGCCCATAATATATAAAAAATAACTTCCAGCTGCTCCTTGTCTACAGACAAGAAAAGAAATGGTAGAGGCACGGATATAGACTGTATAGTGAATATGCTTATTTTAAAAAATAAAAATAAAGAGCAACACTTATGTTAGTACAATGCAGCACTGAATAGTACTACATTAC



gi|88278721|gb|CI399721.1|CI399721 CI399721 Oryza sativa (japonica cultivar-group) leaf of seedling irradiated with UVC [0.7 min

TTGTACTAGGATGTGTCACGT
||.|||||||| | |||||.|
AATATGATCCTCCCCAGTGTA

EST sequence (targeted fragment marked with yellow):
GGTCGCCAACTCTCACCATTTTTTCTGAATTCCAGGTGTTTCTGATCTCCTCTGTTCGTGATTCTGTCCGATTTTTCCATTTACATCCATACACATTCTCTGGCCTCCTTCTAGAAGACGATGTCGCTTTTATTATTTTGGGCTATGGCGTGGAGGGTGGGAACCTTCCACTTTCGTATATAGTAAAAAGAAAAAAAATATTAACTGCATACTTTTTTTAAAAAAAAAACCCAACCTAAAAATGTGACCCCTCCTAGTATAATTCAGAATCGTGGTACTGGGAGAGGATGGGCTTTTTGGGGAGGGAGAGAGTAGTAAGTTGCTCATCTTCTAGTCTACGTCTCCGGATTAATATCTTCCCGATTCATAATGCGACGAAGGGTTTCACCGGCCGGAGCTCGCCGCCGTTGAGGAAG



gi|87015628|gb|CI277586.1|CI277586 CI277586 Oryza sativa (japonica cultivar-group) mixed shoot (Normalized Library) Oryza sativa

TTGTACTAGGATGTGTCACGT
|.|||||||||..|.| ||||
AGCATGATCCTGTATACTGCA

EST sequence (targeted fragment marked with yellow):
CATCTGGGAAGGCAAACGAATTCAAGTGAAACGGGTATGTAGTGTTACATGTACATGGCGATCAGCCCTGATGTTTCTGCATTGTTTCCAGTTACTTTCCAAACGAATGAGCACACATGCACGCACATATTGCATATACAATTCTTTCCAACAAGCAATGATTATTTGGGGCACCATGATAAGCCTTGGTACACCTTCTACAGGATCTTTCCCTTTCCTTCAATTAACAAATCATCTGCTTGTGCTGCCCAGATCGAAGTCCATAGTGTAGTCATATTCAATAGTGGGTATGACTGAGGCCATAAACTTCAAAAATATGAAAAGGTACTTGTCAACTTCTGGTTCAACTCCTTGAGACATTAGAACATCAATGATCTTTTTCATCACAGCAGCATGTTTGCATGGATGCACTGAAGCATGCTTGCCTGCTGACAAGTGAGGATGGTCTTCAATAGTCACCGTCTTCCGTGCATGATCTTGGCTGATATCTTCAAACACAAGTTCAGGCTTTAGTGGCATTCTTGACTCATCATATCCGGTAAGCCAGACACGTGGGGTTTGGTAATATTTGTCATATGTGATGCTAACGTCATATGTCCTAGTACGAAGGATGTTGTCATCTTCAGGCTCTTCTGCGACAAAATATGAAG



gi|87032094|gb|CI362174.1|CI362174 CI362174 Oryza sativa (japonica cultivar-group) flower Oryza sativa Japonica Group cDNA clone

TTGTACTAGGATGTGTCACGT
||.|||||||| | |||||.|
AATATGATCCTCCCCAGTGTA

EST sequence (targeted fragment marked with yellow):
CTGAATTCCAGGTGTTTCTGATCTCCTCTGTTCGTGATTCTGTCCGATTTTTCCATTTACATCCATACACATTCTCTGGCCTCCTTCTAGAAGACGATGTCGGTTTTATTATTTTTGGCTATTGCGTGGAGGGTTGGAACCTTCCACTTTCGTATATAGTAAAAAGAAAAAAAATATTAACTGGATACTTTTTTTAAAAAAAAAAACCCAACCTAAAAATGTGACCCCTCCTAGTATAATTCAGAATCGTTGTAATGGGAGAGGATTGGGTTTTTTGGGACGGAGAGAGTAGTAAGTTGCTCATCTTCTAGTCTACGTCTCCGGATTAATACCTTCCCGATTCATAATGCGACGAAGGGTTTCACCGGCCGGAGCTCGCCGCGTTGAGGAAGTCGGAGTACACCGTGCTGAGCTCCTGACGTACTCGTCCTCGCCGGCGCGGTGAAGTT



gi|66915217|gb|CX102065.1|CX102065 RECm3043 A normalized whole-life-cycle cDNA library of rice Oryza sativa Indica Group cDNA cl

TTGTACTAGGATGTGTCACGT
||||| |||||||||||||.|
AACATAATCCTACACAGTGTA

EST sequence (targeted fragment marked with yellow):
TGGTACCTGCAGGTACTGGTCTGGACTCCGTGTCACCACGCGTCGGGGTATAGCTTTGCTGGTGGTTACATTGCCGGTGTCTTCTGTGCTATTGTTTCTCACCCGGCAGATAATCTAGTCTCTTTCCTGAACAATGCCAAGGGTGCTACAGTGGGTGATGCTGTTAAGAAGCTTGGTCTCTGGGGTCTATTCACTCGTGGACTGCCCCTACGTATTGTCATGATCGGTACCCTTACTGGAGCTCAATGGGGAATTTATGATGCATTCAAAGTCATGGTTGGATTGCCAACTACCGGTGGTGTTACGCCAGCACCAGCCACTTCAGATGCTGGATTGAAAGCTGTCAGTGCCTGATTTTCTCATTAGGACAACTTGGTTATTTTTGGAACTTATCGTTCTTCATGGATGGAAAATATATTGGTCACATGAGTTCAATTATATTTTTGTTTAAAATTTTTGTAGAGGATGACTATGTCATCTTTGGAATGAGAGGAACTCGTTAAAACAGACAATGATATATTTTTTTTTGTCCAAGTGTAAGTTCTAATACTTGGTATAAAATAAGATTTAGGAACTTGGTATTCCCTCCGCCCCTAAATATAAAGAATTTTGGTTGAATGTGACACATCCTAATACAACGAATTTGGACAGGCTTCATGTCCACATTCATTGTAATAGGATATGCCATATCCAAGCAAAATCTATAAGGGACGGAGGGAGTATAAAATAAGATTTAGGAACCCAGATGGTTAGCGCACAAGTTGTGTTCCATTTCCTTTACACCATATTCTATTTTAATTAATTATTTAAACTACTCTCATGTATTCTGGGGCATCCCCATTTACGATTTACTAACCCTGGTCGATATTCACTTCTGTCCTCGAAAGAAGAAGTGTTAAAGAACAAGCAAGAGAAAGAAAACAAATACAAAAAAGGGCGGCAGGACACATAAAGGTGAGGACTTATGGCAAAAAGAGGTAGGGGGAGAACACGAACCTGGTAAGCCGCTTGCG



gi|29676833|gb|CB673108.1|CB673108 OSJNEe07H18.f OSJNEe Oryza sativa Japonica Group cDNA clone OSJNEe07H18 5', mRNA sequence

TTGTACTAGGATGTGTCACGT
|||| |||||| | |||||.|
AACAAGATCCTCCCCAGTGTA

EST sequence (targeted fragment marked with yellow):
TTTTTTTTTAATAATAATCTTTCACTAATTTATTTTCAACTGTACGTCTGTGCGAAAGAAAAAAAAAAGCTTTTGTGGACAAAAATACAGTAACTAGCTAGTTTTCTATATCCACACTAAACACATCGAACATACTCCATCCGTCCCAAAAAAAAAAAACTCAACATAGAAGGGGATGTGACCCCTCCTAGAACAACGAATCTGGATTATCCTTAGGTTGAGTTTTTTTTTTTTGGGACACTGCTTACTACTGAGACAAGTCCTACACTCCTACTAGAGAGGCAAAACCTTTGCTTTGGTTATTTAGGAAACCATAGTTATTATACTTCTGACCATGCAGCACAGGGGACTGAAGATCTTATAAGTTGGCACGGAAATATTTCCGTGACTCCTGCTGTTTTATGCTGTCCGCCACATGGGCGATGACGCCGGCACCGGCATTGTGAAGCCACTCATTCTTAACATGTATGTTGATATGAGCAAAGTAAGGCCATAGTGCTGTATGGAAGATGACATCTACTTTCTTCCAACCGACCCTCTGCAAGCCATGGATCATCTCCTCTTCCATCATTTCGAGATATTCTTCAGTGTTTTCTTTGTTTGGTCTACTCTGTGCAGCTTCTTTGGCTCTGGCAGCTTGCAGAGGGAAATGAGGGCCATCACATGATATAGGCGAACAATATTCCATATTCACAATGTGCTTGTAGCCATCCAGTGAACGATGTGAGGGCTTTGTAAGGTCTTTTTCTCTTCTTATTGAAGATGTTCGCCATCCGACCATAT



gi|89183890|gb|CI046455.1|CI046455 CI046455 Oryza sativa (japonica cultivar-group) callus Oryza sativa Japonica Group cDNA clone

TTGTACTAGGATGTGTCACGT
| ||||||||||||.||||.|
ATCATGATCCTACATAGTGTA

EST sequence (targeted fragment marked with yellow):
TTATATTTGATAACAGAGAGAGTAGTACATATATTTTCCTACTGGTGAGCATTTTTCAAATTTAATATATTTTGACGAATGATTCAAATCTACTCCCTCCGTCCAGATGTGATACATCCTAGTACTACGAATCCGGATATACATGTCTAGATTTATAGTGCTATAATATGTTACATCATGTTCTAGATTTGTTTTTAATAGGACGGAGTATAGTATATCCGACCGCTCGAAGAATTAGAGACATTCCTGCTTCATCTTGTGATGTAGCCAACGAAGTCATCCAAGCCTTTCCGCGAGGACCCGCCGTCTGCCACAGACGCGCGGACGGCCTCGCCGAGCTCCTTTGCCCGCCGCCGTATTGTCATCCCTTTCTCAGGCAGCATCGCCTCCTCAATGACCTCCTGGATGGCCTCCGCCGGGACCACCTCGCTGTGCTTCTCCCATGGCCTCACGAGGAGGC



gi|86498919|gb|CI141552.1|CI141552 CI141552 Oryza sativa (japonica cultivar-group) mixed shoot (Normalized Library) Oryza sativa

TTGTACTAGGATGTGTCACGT
| ||||||||||||.||||.|
ATCATGATCCTACATAGTGTA

EST sequence (targeted fragment marked with yellow):
TTTGCGTACTCTATCCGTCCCATAAAAAACTAGATGTGATACATCCTAGTACTACAAATCAGTACATACATATATCTAGATTTATCGTACTAGAATATATCATATCTGGTCCTAGATTCGGTTTTTTATGGGACGGTGGGAGTATCGATGGATTAATTCCATGGCGGTCGGTCTGGACGAGATCATCCTCCTTTCTGCTTGAAGGAGGAGTACATCTGGACAATGGTGGAGACGAAGGTGACGAAGGCGACGAACTCGGCGACCACCGCCCATGGCACCGTGAAGTAGTTGCGCTTCACGTCCGCCCACATCATGAACAGCGGGTGCCGGCTCCTCTCCCGGAGCTCCACCACCATCCCTCCCAGGTAGCTCCGCTCCAGCTCCACCTCGCCGCTCGCCGCCCCGACCTGCCGGAACAGCCTCACCACCTCCTCCTTGCCCTCGCCGCCGCCGTTCCCGTGCACCACCGCCACCACCTCCGCCGCCGCCAGCGCCCCGGCGTCCTCCGCCGACTGCACCATCTTCGCCATGAACGACACGTACGCCGACACGTCGCGCGCCTCCGCCTTCGCCGCCGACTGCTCGAACGCCATCAGGTTCAGCA



gi|88247299|gb|CI247148.1|CI247148 CI247148 Oryza sativa (japonica cultivar-group) Shoot and root of germinating seeds Oryza sat

TTGTACTAGGATGTGTCACGT
| ||||||||||.||||||.|
ATCATGATCCTATACAGTGTA

EST sequence (targeted fragment marked with yellow):
TTTTTTTTTTTTTTTTTTTTTTTTCTGCAATATGGTAATTCTTCATGTTAACTTTCCCTCTGACATACACAGTGCGCCCTTACTTTAAATAAAGTACATGAGTCTAAAAAAAAGCAGAGCCATTTGGGCCAATATTTCTACAACTGAATAACAAAGCATTTTAGAACCATCTAGAAGAGAAGTGAGTAAATCTATGATTTGACGTATGCCTCCTTAGCAATGGAGCGAAGGAAGCACAAAAGTTGTTTCTTTGCTCCCAAAAGCTTCATGGTAGATTCCTCTTCATGTTCATTTTCTATATTATCTTGGACCATGTGGACTGTCCTCACGAGCTTCCGCAGTTCCTGTTAACATAACATCAGTTAATTTCTTCAACTAATATATACTCCCTCCATTCTCCAAAATATAAGGGATTTTGGGTTGATGTGACATATCCTAGTACTATGAATCTGGACAGGTTCGCTGTACAGATTTGTAGTGTTAGAATGTGTCACATCCATCTAGAATCCCTTATATTTTGGGACAGATAGAGTATATAGTTTGGATGGTACATATATAAGGTTGAGCATTCAATGTTTAACATGAATGCAATAGGGCTTATTAA



gi|88278730|gb|CI399730.1|CI399730 CI399730 Oryza sativa (japonica cultivar-group) leaf of seedling irradiated with UVC [0.7 min

TTGTACTAGGATGTGTCACGT
||.|||||||| | |||||.|
AATATGATCCTCCCCAGTGTA

EST sequence (targeted fragment marked with yellow):
GGGTCGCCAACTCTCACCATTTTTTCTGAATTCCAGGTGTTTCTGATCTCCTCTGTTCGTGATTCTGTCCGATTTTTCCATTTACATCCATACACATTCTCTGGCCTCCTTCTAGAAGACGATGTCGCTTTTATTATTTTGGGCTATGGCGTGGAGGGTTGGAACCTTCCACTTTCGTATATAGTAAAAAGAAAAAAAATATTAACGGCATACTTTTTTTAAAAAAAAACCCCAACCTACAAATGTGACCCCTCCTAGTATAATTCAGAATCGTGGTACGGGGAGAGGATGGGCTTTTTGGGGACGGAGAGAGTAGTAAGTGGCTCATCTTCTAGTCTACGTCTCCGGATAAATATCTTCCCGATTCATAATGCGACGAAGGGTTTACCGGCCGGAGCTCGCCGCCGGTGAGGAAGTCGGAG



gi|109712534|gb|CI105142.1|CI105142 CI105142 Oryza sativa (japonica cultivar-group) Panicles one day after flowering Oryza sativ

TTGTACTAGGATGTGTCACGT
| ||||||||||||||| |.|
ATCATGATCCTACACAGCGTA

EST sequence (targeted fragment marked with yellow):
TCTTTTCGCTGTTGAATAATTGATTGTATAGGAAACACATATACAATGATATAAATAACAGCTGTACAATGGAAATGCAAGTGTGTGTGTACACAACTTGGCGGATGAAACCTACTTCAATTCTTCCCCATTTTGAAACATACATTAATTCTCCTTTATATTGCCACCAAAAATTTTACAAAACCTATCCCTAATAATAACCAAGCCATCACACTAAGTAGATCAACTGTTAGGGCTCAAGATTAACCAGAAGATGATGATGATTTTGCCAGTAATTACCACTCCCTCCGTCCCATAAAAAACCAACACTCGATGCGACACATCCTAGTACTACGAATCTAGACATATTTCTATCCAGATTCGTTGTACTATAATGTGTCACATACAGAGCTAGATTCACTTTTTGGACGGAGGGAGTAGACCATATCCATGGCGTCGTCGCGTACAGCGTGTACTTCTCCCAAGAGCGAGAGGAGGAAGAAGAAGGAGAGATGGTCAGC



gi|88457888|gb|CI542070.1|CI542070 CI542070 Oryza sativa (japonica cultivar-group) root of seedling 2ppm BAP(benzyl amino purine

TTGTACTAGGATGTGTCACGT
| ||||||||||..|||| .|
ATCATGATCCTATGCAGTATA

EST sequence (targeted fragment marked with yellow):
GCACAAAGTAGTTGTTTGATACTCTCTCTGTCCCTAAATATAAGATATTTTGGTTGGATATGACGTATCCTAGTACTATAAATCTAGACAAATATGACCAGATCTGTAGTACTAGAATTCATCCCATCCATCCAAATTTTCAGAATATTTTGGGACGGAGGGAGAACCTGATAAGAAAATTACAATAAATTTAAAAGTATGTATCTAGATTTATTAGGGAGAAAGAAAATTAAGAAGGTGCCTATGAATTTTAATCAAAGGTATTTGTGAACATTATGTTAGACCTTAATTATGCTAAAATTTCTCCAAATCATGGAGGAATTTTATATCCTATGAAATTACTTTGAAGCAATGCTACATCTGAAAACTTTAATTTCATAGGAATGTTTTCCAATGGATTGAATTCCTC



gi|89195736|gb|CI393765.1|CI393765 CI393765 Oryza sativa (japonica cultivar-group) seed Oryza sativa Japonica Group cDNA clone J

TTGTACTAGGATGTGTCACGT
||.|||||||| | |||||.|
AATATGATCCTCCCCAGTGTA

EST sequence (targeted fragment marked with yellow):
CCAGGTGTTTCTGATCTCCTCTGTTCGTGATTCTGTCCGATTTTTCCATTTACATCCATACACATTCTCTGGCCTCCTTCTAGAAGACGATGTCGCTTTTATTATTTTTGGCTATTGCGTGGAGGGTTGGAACCTTCCACTTTCGTATATAGTAAAAAGAAAAAAAATATTAACTGCATACTTTTTTTAAAAAAAAAACCCAACCTAAAAATGTGACCCCTCCTAGTATAATTCAGAATCGTTGTACTGGGAGAGGATTGGCTTTTTTGGGACGGAGAGAGTAGTAAGTTGCTCATCTTCTAGTCTACGTCTCCGGATTAATATCTTCCCGATTCATAATGCGACGAAGGGTTTCACCGGCCGGAGCTCGCCGCCGTTGAGGAAGTCGGAGTACCACCGTGCCGAGCTCCTGACGTACCTCGTCCTCGCCGGCGCGGTGAAGTCGACGCAGCACAGGCCAAAGCGGTTGCCGTAGCCGGAGAGGAA



gi|88277819|gb|CI398621.1|CI398621 CI398621 Oryza sativa (japonica cultivar-group) leaf of seedling irradiated with UVC [0.7 min

TTGTACTAGGATGTGTCACGT
||.|||||||| | |||||.|
AATATGATCCTCCCCAGTGTA

EST sequence (targeted fragment marked with yellow):
GGTCGCCAACTCTCACCATTTTTTCTGAATTCCAGGTGTTTCTGATCTCCTCTGTTCGTGATTCTGTCCGATTTTTCCATTTACATCCATACACATTCTCTGGCCTCCTTCTAGAAGACGATGTCGCTTTTATTATTTTTGGCTATTGCGTGGAGGGTTGGAACCTTCCACTTTCGTATATAGTAAAAAGAAAAAAAATATTAACTGCATACTTTTTTTAAAAAAAAAAACCCAACCTAAAAATGTGACCCCTCCTAGTATAATTCAGAATCGTTGTACTGGGAGAGGATTGGCTTTTTCGGGACGGAGAGAGTAGTAAGTTGCTCATCTTCTAGTCTACGTCTCCGGATTAATATCTTCCCGATTCATAATGCGACGAAGGGTTTCACCGGCC



gi|86489481|gb|CI132114.1|CI132114 CI132114 Oryza sativa (japonica cultivar-group) Panicles less than 5cm stage and Panicles two

TTGTACTAGGATGTGTCACGT
| ||||||||||.||.|||.|
ATCATGATCCTATACGGTGTA

EST sequence (targeted fragment marked with yellow):
TTTTTTTTTTTTTTTTTTTTTTTATGGCAGAACAGATTAGGCCCGCCATGTATATTGATCACAGTAAGGGAACAAGTAGACACTCCCTCCGTCTCATAATAAGTTAATTTAGTACGAGATGTGGCATATCCTAGTACTACGATTTTGGACAAAGGCATGTCTAGATTCGTAGTTCTAAGATATGTCACGTCCCGTAATAGAGTAACTTATTTTCTGACGAAGGTAGTATATGTTAAGAAAAGCATATACATGCACATTAATTGCTCCAGAATAATAAGACTAATGGTAATACATCAATTATAGATTATGAACATTGAAACCAAAATTCTGCACATGCACTTTCCTCTGTTATTCAGTTATATCAAAGCAGAGTTTAGCTTCATCCCAGGGACCATTGATCTCAAACTTGTATTCCTGAATTCTTATTAGCCAGTAAGGGCAAACAATTGAGATAAAAACAAGCAGTGCCAGCAGTAGGATGAAGAACATGTGATG



gi|86873645|gb|CI316307.1|CI316307 CI316307 Oryza sativa (japonica cultivar-group) shoot Oryza sativa Japonica Group cDNA clone

TTGTACTAGGATGTGTCACGT
| ||||||||||||||| |.|
ATCATGATCCTACACAGCGTA

EST sequence (targeted fragment marked with yellow):
AGATCAACTGTTAGGGGTCAAGATTAACCAGAAGATGATGATGATTTTGCCAGTAATTACCACTCCCTCCGTCCCATAAAAAACCACCACTCGATGCGACACATCCTAGTACTACGAATGTAGACATATTTCTATCCAGATTCGTTGTACTATAATGTGTCACATACAGAGCTAGATTCACTTTTTGGACGGAGGGAGTAGACATATCCATGGGGTCGTCGCGTATAGCGTGTACTTTTCCCAAGAGCGAGA



gi|163928234|gb|EG712550.1|EG712550 Os5MPREST0555 Rice young panicles Oryza sativa Japonica Group cDNA clone 5MPR-C1C10S, mRNA s

TTGTACTAGGATGTGTCACGT
||||| |||||||||.|||.|
AACATAATCCTACACGGTGTA

EST sequence (targeted fragment marked with yellow):
GGCCATTACGGCCGGCGGGGTGGAGGAAGGCGAGATGCATGGCGGGTGGCGGGGTGAAGAAGGCGAGATGGAGGCCGGCGACTTTTTTTTCTTTTAGTTTTGTTCCCCTTATGCCTTATAGGTTCAGGTTCTAAAACCGGCACCTATAATTTCGGGTACAGGTGTCAACCGGCACCTATGGCCGATTCCCAACCGGCACCTATGAGGTTTTCTGTAATAGTGGCTGTCTCTTACTCCCTCCGTCGTCAAATATAAGGTTATTTGGCAGGATGTGGCACATCCTAATACAACAATCTGGGTAGAGAGTCTATCCAAATTCGTTGTACTATGATATGTCACATCC



gi|88271550|gb|CI387603.1|CI387603 CI387603 Oryza sativa (japonica cultivar-group) callus Oryza sativa Japonica Group cDNA clone

TTGTACTAGGATGTGTCACGT
||.|||||||| | |||||.|
AATATGATCCTCCCCAGTGTA

EST sequence (targeted fragment marked with yellow):
GGCACAAAGGAGTACAGCAAATCAAATTGGTCGCCAACTCTCACCATTTTTTCTGAATTCCAGGTGTTTCTGATCTCCTCTGTTCGTGATTCTGTCCGATTTTTCCATTTACATCCATACACATTCTCTGGCCTCCTTCTAGAAGACGATGTCGCTTTTATTATTTTTGGCTATTGGGTGGAGGGTTGGAACCTTCCACTTTCGTATATAGTAAAAAGAAAAAAAATATTAACTGCATACTTTTTTTAAAAAAAAAAACCCAACCTAAAAATGTGACCCCTCCTAGTATAATTCAGAATCGTTGTAGTGGGAGAGGATTGGCTTTTTTGGGACGGAGAGAGTAGTAAGTTGCTCATCTTCTAGTCTACGTCTCCGGATTAATATCTTCCCGATTCATAATGCGACGAAGGGTTTCACGGCGGAGCTCGCCGCCGTTGAGGAAG



gi|33653753|gb|CF276367.1|CF276367 14ETL--01-H21.g1 Rice etiolated leaf plasmid cDNA library (14ETL) Oryza sativa Japonica Group

TTGTACTAGGATGTGTCACGT
|||| |||||| | |||||.|
AACAAGATCCTCCCCAGTGTA

EST sequence (targeted fragment marked with yellow):
TTTTTTTTTTTTTTTTTAATAATAATGTTTCACTAATTTATTTTCAACTGTACGTCTGTGCGAAAGAAAAAAAAAAGCTTTTGTGGACAAAAATACAGTAACTAGCTAGTTTTCTATATCCACACTAAACACATCGAACATACTCCATCCGTCCCAAAAAAAAAAAAAACTCAACATAGAAGGGGAATGTGACCCCTCCTAGAACAACGAATCTGGATTATCCTTAGGTTGAGTTTTTTTTTTGGGACACTGCTTACTACTGAGACAAGTCCTACACTCCTACTAGAGAGGCAAAACCTTTGCTTTGGTTATTTAGGAAACCATAGTTATTATACTTCTGACCATGCAGCACAGGGGACTGAAGATCTTATAAGTTGGCACGGAAATATTTCCGTGACTCCTGCTGTTTTATGCTGTCCGCCACATGGGCGATGACGCCGGCACCGGCATTGTGAAGCCACTCATTCTTAACATGTATGTTGTTATGAGCAAAGTAAGGCCATAGTGCTGTATGGGAAGTTGACATCTACTTTCTTCCAACCGACCCTCTGCAAGCCATGGATCATCTCCTCTTCCATCATTTC



gi|88268670|gb|CI378605.1|CI378605 CI378605 Oryza sativa (japonica cultivar-group) callus Oryza sativa Japonica Group cDNA clone

TTGTACTAGGATGTGTCACGT
| |||||||||||||| |||
ATCATGATCCTACACAAGGCA

EST sequence (targeted fragment marked with yellow):
GTCAAAAACATATTTTTTTTCCTCTACATATCTTTGTTGAATGAAACTCAAACCACATAAGATCCCTTGCCAGTTTACAGGTTAAAAAGTCATAGAATTTAGCACATTTTCTTAAACACTTCAATTACTCCCTCCGTCACAAAATATAAGAGAATTTGGATGGACGGAACACATCCTAGTACTAGAATATGGACAAACTTCCTGTCCAAATCCAAAATCCGGGACACATCTCCATCCAAAATCCTTTATATTTTGGAACGGAGGAAGTAAAACAATTTTGCACATGACTGTTGAGATTCCATGTCATCATTTTTGTTTTGGCAACAATGGTGCGGCAACATTTGAAACTGAACCAAACATGTCCTGGAGACCTGGACTGACCTTCTTGTTTGGCGCGGTCCCCGGCAGTTCACTAGAGGCCGAGAATTAAGCTCAAATCCTAGCCCATCGACAGGAATCGTTACATTTTGGCCC



gi|117227253|gb|CT846486.1|CT846486 CT846486 Oryza sativa (indica cultivar-group) cv. Guang Lu Ai 4 Oryza sativa Indica Group cD

TTGTACTAGGATGTGTCACGT
||..|||||||| ||||| .|
AATGTGATCCTAAACAGTATA

EST sequence (targeted fragment marked with yellow):
TTGATACGCACAGTGTACACACATTCATGCATCCTTGCCAATTACTGTACTAGCTAGTACTCCAGCTTGTAACTTTTTCCGTACAAATATATGGTCGTCCTGTGTATGGAACTTGGAATCTTATCGGTTCAAGGCAAGAATGGAACGTACGTACTACGTCTCCTAAAAGATGCAAATATATAATTCTTGAATACACATTGCATCTAATTATTATAGTGCTTTTTTTTTTGCATGGATTTCTGTACTGTTGTGCTTAACATGCAATTGAGTAGAGAAAAATAATCATTTTCTCGGGAGTGGATTTTAAACTCTCGAGAGGACATCCCCTCGTTATTTGCATGCAATTTAAATAGTTACGAAAAAATCTAAATAAAATATGAGAAGATGTATTAATATGTGATATATCGCTCCACAAACATGCAAGTTAAAATTTAACTTTTACATGTCGTAACGAAAAAAAATAAATTTAACCATGAATATGCATTAACTAGCTATAATTTAATTTTTTTTCGTTGTGAGATATAGAAGTCGAATTTGAGCTTCATGTTTGTGGAGTGATATATCCCATATTAATATGTCTTTTTATTTTTTAAAAAAAACAACTAGACTATTTGAGTGATATGCAAACAATTATGGGACATCCTTCTAAGAGTTTAGAATAAAAATACTATTTTCTCAACTCTCTTTGAGAGTTTGAGGATAAGGAGATCGGGAAGATTGAGAAGATACGCAAAATGAGGTGAGCTATTAGCGCATGATTAATTGAGTATTAACTATTTTAAATTTTAAAAATGGATTAATATGATTTTTAAAGCAACTTTTCTATAGAAAATTTTTGCAAAAAACACACCGTTTAGTAGTTTGGGAAGCGTGTGTGCGGAAAACAAGGTGTTTTCTCACCCTATCTCACACAAACGAACGCAGCCTAAGTGAGCAACAATTTCTGGTCATCTGTATTACTCGATCCGTCCTAAATTATATGGCGTCATTCAATCTCGGTAACTTTTGACCAATAATTATACTAACTATATATATACTCCCTTCGTCCCATAATATAAGGGATTTTAGATGGATATGACAAATCCTAGTGTAATGAATTTGAACAGACCGTTGCACTAGGATGTGTCAAATCCATCCAAAAATATCCTATATTATGGAGACGGAGGGAGTACTAAGTATTATATATATTATATCACTAGATTCATATTTATTTTAATTACTTTT



gi|88273420|gb|CI393826.1|CI393826 CI393826 Oryza sativa (japonica cultivar-group) seed Oryza sativa Japonica Group cDNA clone J

TTGTACTAGGATGTGTCACGT
|||| |||||| | |||||.|
AACAAGATCCTCCCCAGTGTA

EST sequence (targeted fragment marked with yellow):
AATAATAATGTTTCACTAATTTATTTTCAACTGTACGTCTGTGCGAAAGAAAAAAAAAAGCTTTGGTGGACAAAAATACAGTAACTAGCTAGTTTTCTATATCCACACTAAACACATCGAACATACTCCATCCGTCCCAAAAAAAAAAAACTCAACATAGAAGGGGATGTGACCCCTCCTAGAACAAGGAATCTGGATTATCCTTAGGTTGAGTTTTTTTTTTGGGGACACTGGTTACTACTGAGACAAGTCTACACTCCTACTAGAGAGGCAAAACCTTTGCTTTGGTTATTTAGGAAACCATAGTTATTATACTTCTGACCATGCAGCACAGGGGACTGAAGATCTTATAAGTTGGCACGGAAATATTTCCGTGACTCCTGCTGTTTTATGCTGTCCGC



gi|88531879|gb|CI458397.1|CI458397 CI458397 Oryza sativa (japonica cultivar-group) whole body 1mM ACC(1-aminocyclopropane-1-carb

TTGTACTAGGATGTGTCACGT
| ||||||||||||||| |.|
ATCATGATCCTACACAGCGTA

EST sequence (targeted fragment marked with yellow):
GTTTGAAACATACATTAATTCTCCTTTATATTGCCACCAAAAATTTTACAAAACCTATCCCTAATAATAACCAAGCCATCACACTAAGTAGATCAACTGTTAGGGCTCAAGATTAACCAGAAGATGATGATGATTTTGCCAGTAATTACCACTCCCTCCGTCCCATAAAAANACAACACTCGATGCGACACATCCTAGTACTACGAATCTAGACATATNTCTATCCAGATTCGTTGTACTATAATGTGTCACATACAGAGCTAGATTCACTTTTTGGACGGAGGGAGTAGACCATATCCATGGCGTCGTCGCGTACAGCGTGTACTTCTCCCAAGAGCGAGAGGAGGAAGAAAAAGGAGAGATGGTCAGCTAGGACACCGAATGCCTCGTGTTCCGCGACGGCGTCGACCTCGTCTCCTCGCCGGGGCTCTCGA



gi|88270076|gb|CI381374.1|CI381374 CI381374 Oryza sativa (japonica cultivar-group) callus Oryza sativa Japonica Group cDNA clone

TTGTACTAGGATGTGTCACGT
||.|||||||| | |||||.|
AATATGATCCTCCCCAGTGTA

EST sequence (targeted fragment marked with yellow):
GGCACAAAGGAGTACAGCAACTCAAATTGGTCGCCAACTCTCACCATTTTTTCTGAATTCAGGTGTTTCTGATCTCCTCTGTTCGTGATTCTGTCCGATTTTTCCATTTACATCCATACACATTCTCTGGCCTCCTTCTAGAAGACGATGTCGCTTTTATTATTTTTGGCTATTGCGTGGAGGGTTGGAACCTTCCACTTTCGTATATAGTAAAAAGAAAAAAAATATTAACTGCATACTTTCTTTAAAAAAAAAACCCAACCTAAAAATGTGACCCCTCCTAGTATAATTCAGAATCGTTGTACTGGGAGAGGATTGGCTTTTTTGGGACGGAGAGAGTAGTAAGTTGCTCATCTTCTAGTCTACGTCTCCGGATTAATATCTTCCCGATTCATAATGCGACGAAGGGTTTCACCGGCC



gi|44678958|gb|CR292392.1|CR292392 CR292392 Oryza sativa library (Han B) Oryza sativa cDNA clone y689h09p3, mRNA sequence

TTGTACTAGGATGTGTCACGT
||||| |||||||| | ||.|
AACATAATCCTACAAAATGTA

EST sequence (targeted fragment marked with yellow):
TTTTTTTTTTTTTTTTTTTTTTTTTAGTAAATGGCATCACGGTAACCGGGCACATTATATCCAAACAGGTGTTGTTACATTGAGACAGATAAATTTAATTGTTTTACAGTTCTGAGCCTGATGCAACTGCTCAGCATGTATGGTTTACGGAAGCAGATCATATCCACGGCTATACAGAGGCCACACAGATAAACTTAACCAGGGAACATATATATATATATATACTCTAATAAGGCCTAGCAAAAGTGGATGCGTAAAATTCAATCAAATGAATTGAATATAGATAGCTACTGCACTGTGAAATGATACATGGCGCTGTACTTATATCTAGCAAGTTCAGCAAGGCACATCTCTTCCATATCCAGCAACCCGACCATGAATGGGCTCCATTTCCCCATAGATCCCGCGATCACCCATCCTGAAGCGAAAGCTCTCGATACATTGTTCCAAAAAAAGTCGTTTCTTGGCACATTGGTGCCAAAAGGTGACAGGAACACGAAGGTCACTCAGGAAGTTCACGTGTCATTCATGTAAAACATCCTAATACAATGGTGAACCGATTTGAAAAGATAAAATTCCCAGAATTCAACTGGAACATGGAC



gi|88257481|gb|CI359869.1|CI359869 CI359869 Oryza sativa (japonica cultivar-group) flower Oryza sativa Japonica Group cDNA clone

TTGTACTAGGATGTGTCACGT
||.|||||||| | |||||.|
AATATGATCCTCCCCAGTGTA

EST sequence (targeted fragment marked with yellow):
GGTCGCCAACTCTCACCATTTTTTCTGAATTCCAGGTGTTTCTGATCTCCTCTGTTCGTGATTCTGTCCGATTTTTCCATTTACATCCATACACATTCTCTGGCCTCCTTCTAGAAGACGATGTCGCTTTTATTATTTTTGGCTATTGCGTGGAGGGTTGGAACCTTCCACTTTCGTATATAGTAAAAAGAAAAAAAATATTAACTGCATACTTTTTTTAAAAAAAAAAAACCCAACCTAAAAATGTGACCCCTCCTAGTATAATTCAGAATCGTTGTACTGGGAGAGGATTGGCTTTTTTGGGACGGAGAGAGTAGTAAGTTGCTCATCTTCTAGTCTACGTCTCCGGATTAATATCTTCCCGATTCATAATGCGACGAAGGGTTTCACCGGCCGGAGCTCGCCGCCGTTGAGGAAGTCGGAGTACCACCGTGCCGAGCTCC



gi|88966843|gb|CI379728.1|CI379728 CI379728 Oryza sativa (japonica cultivar-group) callus Oryza sativa Japonica Group cDNA clone

TTGTACTAGGATGTGTCACGT
||||| ||||||.||.|| .|
AACATTATCCTATACGGTATA

EST sequence (targeted fragment marked with yellow):
GAGGGGAAAAGAAGATGAATAACTGAACAAGGAGTAATTTACATCGTAAAATGGGGAATGCCCCAAAGATACATGTAGAGTAGTATAAAATAATTAAATTTATGAATATGGTGGTAAAGGAAATGGAACACAACCCTGGGCGCCTACCCATCTGGGTTCCTAAATCTTATTTTATAGTGCACTACGGTCACTTGATAGATTTTGGTTGGATATGGCATATCCTATTACAACGAATGTGGACATGAAGTCTGTCCAAATTCGTGGTATTAGGATGTGTCAGATCAAACCAAAATTCTTTATATGTAGGGGCGGAGGGAATACCAAGTGCCTAAATCTTATTTAATACCAAATATGACCAACTTACACTCGGATAAAAAAAAATATCATGGCCTGTTTTAACGAGTTACTCTCATGCNAAAGATGACATAGTCATCCCGACAAATTTAAAACAGCAAATATAGTGGACTAATGTGACCAACGTATTTCCATCGTGAAGAACGATAAGTTCAAAATACGAGGTTGGCGATGAGAAATGCGG



gi|88551085|gb|CI481111.1|CI481111 CI481111 Oryza sativa (japonica cultivar-group) whole body 1mM ACC(1-aminocyclopropane-1-carb

TTGTACTAGGATGTGTCACGT
| ||||||||||||||| |.|
ATCATGATCCTACACAGCGTA

EST sequence (targeted fragment marked with yellow):
GTTTGAAACATACATTAATTCTCCTTTATATTGCCACCAAAAATTTTACAAAACCTATCCCTAATAATAACCAAGCCATCACACTAAGTAGATCAACTGTTAGGGCTCAAGATTAACCAGAAGATGATGATGATTTTGCCAGTAATTACCACTCCNCTCCGTCCATAAAAAACCAACACTCGATGCGACACATCCTAGTACTACGAATCTAGACATATTTCTATCCAGATTCGTTGTACTATAATGTGTCACATACAGAGCTAGATTCACTTTTTGGACGGAGGGAGTAGACCATATCCATGGCGTCGTCGCGTACAGCGTGTACTTCTCCCAAGAGCGAGAGGAGGAAGAAGAAGGAGAGATGGTCAGCTAGGACACCGAATGCCTCGTGTTCCGCGACGGCGT



gi|86890667|gb|CI303917.1|CI303917 CI303917 Oryza sativa (japonica cultivar-group) cold treated callus Oryza sativa Japonica Gro

TTGTACTAGGATGTGTCACGT
| ||||||||||.||||||||
ATCATGATCCTATACAGTGCA

EST sequence (targeted fragment marked with yellow):
AGATATTTGACTCGTGTTGAGCCGGCGGTCCAACCGGTTGAGCCATTCAAACCGTGAACCGAGGGCTTCACCGGTTCCACGTCCGGTCCGGTCCTAATAACTTTGACTGGACGTGACATATCCTAGTACTATGAATCTGGATATACCTCTGTCCAGATTCATTGTACTAGAATATATCACGTCTAGTCTTAGGTTCGTTTTTTTGGACGGAGGGAGTTGAGAAGATCAACCCCCCCANCCCACCCCACCCCAAACACACACACTGTGTTGCGCTGCTGCCACTCTGCACCTCGCAGCGCTGAACGGGATGAATCGGA



gi|88458502|gb|CI550042.1|CI550042 CI550042 Oryza sativa (japonica cultivar-group) root of seedling gamma-irradiated (9.5min), a

TTGTACTAGGATGTGTCACGT
||.|||||||| | |||||.|
AATATGATCCTCCCCAGTGTA

EST sequence (targeted fragment marked with yellow):
GGTCGCCAACTCTCACCATTTTTTCTGAATTCCAGGTGTTTCTGATCTCCTCTGTTCGTGATTCTGTCCGATTTTTCCATTTACATCCATACACATTCTCTGGCCTCCTTCTAAAAAACGATGTCGCTTTTATTATTTTGGGCTATTGCGTGGAGGGTTGGAACCTTCCATTTTCGTATATAGTAAAAAGAAAAAAAATATTAACTGCTTACTTTTTTTAAAAAAAAAACCCAACCTAAAAATGTGACCCCTCCTAGTATAATTCAAAATCGTTGTACTGGGAGAGGATGGGCTTTTTGGGGACGGAAAGAGTAGTAAGTTGCTCATCTTCTAGTCTACGTCTCCGGATTAATATCTTCCCGATTCATAATGCGACAAAGGGTTTCACCGGCCGGAGCTCGCCGC



gi|88528012|gb|CI456212.1|CI456212 CI456212 Oryza sativa (japonica cultivar-group) whole body 1mM ACC(1-aminocyclopropane-1-carb

TTGTACTAGGATGTGTCACGT
| ||||||||||||||| |.|
ATCATGATCCTACACAGCGTA

EST sequence (targeted fragment marked with yellow):
GTTTGAAACATACATTAATTCTCCTTTATATTGCCACCAAAAATTTTACAAAACCTATCCCTAATAATAACCAAGCCATCACACTAAGTAGATCAACTGTTAGGGCTCAAGATTAACCAGAAGATGATGATGATTTTGCCCAGTAATTACCACTCCCTCCGTCCCATAAAAAACCAACACTCGATGCGACACATCCTAGTACTACGAATNTACACATATTTCTATCCAGATTCGTTGTACTATAATGTGTCACATACAGAGNTAGATTNACTTTTGGGACGGAGGGAGTAGACCATATCCATGGCCGTCGTCCCGTACAGCGTGTACTTCTCCCAAGACCGAGAGGAGGAACAACAAGGACCAGATGGTCAGCTACGACAACCAATGCCTCCTGTTCCGCGACCGAGTTCACT



gi|33683974|gb|CF312213.1|CF312213 ABF--07-N05.b1 ABF3-overexpressing transgenic rice plasmid cDNA library (ABF) Oryza sativa Ja

TTGTACTAGGATGTGTCACGT
||||| ||||||. .||||||
AACATAATCCTATTTAGTGCA

EST sequence (targeted fragment marked with yellow):
ATACCTCCGTTTCAAAATGTTGCAACCTAGGACGTGATTTATCCTAATACAACAAATCTAGACAAAAGTTCTATCCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA



gi|88268003|gb|CI378775.1|CI378775 CI378775 Oryza sativa (japonica cultivar-group) callus Oryza sativa Japonica Group cDNA clone

TTGTACTAGGATGTGTCACGT
.|||||.|||| ||.|||||
GACATGGTCCTCCATAGTGCC

EST sequence (targeted fragment marked with yellow):
GGGCAAACAATTTTGATTACTCTGCTCCAATCCAACAGGATTGAGCCACCGCCGCCATCGCCTCCAAGTTGCCAGTTCTTAGTTTCTTCAGTTGGTTACATCGGTTTATATCTGAATCTCACCTACCCAATCATTTCTTTCCTCTCTCACTCGCAACACAACACAGCTGTATACAGCTCACATTACACGGGCCATTCTGGTCCATAATAGCGAGGATTTGACTTGATTTGCCTGGCCGGACGCAAAGTCTTGTTGGACTCCCTTGGCTTTATCAGCTTTCCCTGTAGCCCGTCTGATACTCCTCCTTGTGCAGCATCCGTGATACCTCCTGGTACAGCATCAGTGCTCTTGACACAAAACAAATCTACCTGGCTCCCGGACCACACCATTTGCTTCCGTGATATCTCTCTCTGCATGCTTT



gi|89174689|gb|CI110887.1|CI110887 CI110887 Oryza sativa (japonica cultivar-group) Panicles two weeks after flowering Oryza sati

TTGTACTAGGATGTGTCACGT
||.|||||||| | |||||.|
AATATGATCCTCCCCAGTGTA

EST sequence (targeted fragment marked with yellow):
TTTTTTTTTTTTTTTTTTTTTTGGATGGAAAGATAACGACAGCGACAGGGATAATGCAGGTGGCACAAAGGAGTACAGCAACTCAAATTGGTCGCCAACTCTCACCATTTTTTCTGAATTCCAGGTGTTTCTGATCTCCTCTGTTCGTGATTCTGTCCGATTTTTCCATTTACATCCATACACATTCTCTGGCCTCCTTCTAGAAGACGATGTCGCTTTTATTACTTTGGGCTATCGCGTGGAGGGTCGGAACCTTCCACTTTCGTATATAGTAAAAAGAAAAAAAATATTAACTGCATACTTTTTTTAAAAAAAAACCCAACCTAAAAATGTGACCCCTCCTAGTATAATTCAGAATCGTTGTACTGGGAGAGGATTGGCTTTTTGGGGACGGAGAGAGTAGTAAGTTGCTCATCTTCTAGTCTACGTCTCCGGATTAATATCTTCCCGATTCATAATGCGACGAAGGGTTTCACCGGCCGGAGCTCGCCGCCGTTGAGGAAGTCGGAGTACCA



gi|88970401|gb|CI383903.1|CI383903 CI383903 Oryza sativa (japonica cultivar-group) callus Oryza sativa Japonica Group cDNA clone

TTGTACTAGGATGTGTCACGT
||.|||||||| | |||||.|
AATATGATCCTCCCCAGTGTA

EST sequence (targeted fragment marked with yellow):
GGCACAAAGGAGTACAGCAACTCAAATTGGTCGCTAAATCTCACCATTTTTTCTGAATTCCAGGTGTTTCTGATCTCCTCTGTTCGTGATTCTGTCCGATTTTTCCATTTACATCCATACACATTCTCTGGCCTCCTTCTAGAAGACGATGTCGCTTTTATTATTTTTGGCTATTGCGTGGAGGGTTGGAACCTTCCACTTTCGTATATAGTAAAAAGAAAAAAAATATTAACTGCATACTTTTTTTAAAAAAAAAAACCAACCTAAAAATGTGACCCCTCCTAGTATAATTCAGAATCGTTGTACTGGGAGAGGATTGGTTTTTTTGGGACGGAGAGAGTAGTAAGTTGCTCATCTTCTAGTCTACGTCTCCGGATTAATATCTTCCCGATTCATAATGCGACGAAGGGTTT



gi|218478710|gb|FG962302.1|FG962302 MA_LYP9_01086 Mature embryo cDNA Library of LYP9 Oryza sativa Indica Group cDNA 5', mRNA seq

TTGTACTAGGATGTGTCACGT
||.||||||||. ||||||.|
AATATGATCCTGAACAGTGTA

EST sequence (targeted fragment marked with yellow):
AGCTGCAATTCGGCAGAAAGGTATTGATGAAAACTGGGAGGCTGCCTTGGAGCACAACCCTGAAGCATTTGCTCGAGTGGTTATGCTGTATGTGGACATGGAAGTCAATGGTGTACCTTTGAAGGCCTTTGTTGACAGTGGAGCACAATCAACTATCATATCAAAAAGCTGTGCCGAACGTTGCGGGTTGCTTAGGCTGCTTGATCAGCGATATAGAGGTGTTGCTATTGGCGTTGGTCAATCAGAGATTCTTGGTAGAATACATGTAGCCCCAATAAAGGTATGTTTGATTGATTCATGTACCCATGCCACTGATATTACAGTGTGAGAGAATATATTATTTATATAATACAAAATTCATCACCTGGGTAGAAAACATGAAATTCCAGGTCCCATAGAAACCATGTGACAAGTCCTAGTATAACCCAAGTCTTTGGTGTTCCTTTAGAACCTAGCGATTTCAGTTATTCTCATACCTCTACAAACTTCAATGGTTTTGCAATTTGTGAATCGTGATATGTAATTCCGTACTAATTATTTAGCAGAAGTAGTTTGTAATGTAAATACTGACAGCTTGATTTGGAACAGATTGGCCATGTCTTCTA



gi|33821633|gb|CF336628.1|CF336628 JMT--06-M02.g1 AtJMT-overexpressing transgenic rice plasmid cDNA library (JMT) Oryza sativa J

TTGTACTAGGATGTGTCACGT
|||| |||||| | |||||.|
AACAAGATCCTCCCCAGTGTA

EST sequence (targeted fragment marked with yellow):
TTTTTTTTTTTTTTAATAAAAATAATAATAATGTTTCACTAATTTATTTTCAACTGTACGTCTGTGCGAAAGAAAAAAAAAAGCTTTTGTGGACAAAAATACAGTAACTAGCTAGTTTTCTATATCCACACTAAACACATCGAACGTACTCCATCCGTCCCAAAAAAAAAAACTCAACATAGAAGGGGATGTGACCCCTCCTAGAACAACGAATCTGGATTATCCTTAGGTTGAGTTTTTTTTTTTGGGACA



gi|88457100|gb|CI531699.1|CI531699 CI531699 Oryza sativa (japonica cultivar-group) 1 day after pollination pistil Oryza sativa J

TTGTACTAGGATGTGTCACGT
||||| ||||||.|.||||.|
AACATTATCCTATATAGTGTA

EST sequence (targeted fragment marked with yellow):
GTTTTTTTTTTTTTAAAATACTTGAGGTTATGAAAAACAAAAAAGAGTGATTGATAATAAGACATTGGATATAGTGGTTCCACATGCGGACGTGCTGCACACGATGAAAAGAGGGGATGAAAGATTTGTACTCCATCCGTCCCTAAATATAAAAGATTTTAGTTGAATGTGATATATCCTATTACAACGAATTTGAACAGGCTCAATTCCTTAAATTTAGGGATGGAGGGAGTATATAGTACTAGAGATAAGGAAGATGATTATATACCCTAAATANCCGGCATATATGCAAAGGATGCAAATAGCNAACTCCAAGTTCAGCCATGCGCCCTATGCCTAAGTATTCATCAGTAAACTCTAAAGCCTNACATCTGCAGGCCGAGGACCAAGGATGCTCTTCGCACG



gi|58679453|gb|CK068140.1|CK068140 75511rsicem_21347.y1 Oryza sativa cv. PA64s panicle ferile cDNA library Oryza sativa Indica G

TTGTACTAGGATGTGTCACGT
|||||||| |||.||||||.|
AACATGATACTATACAGTGTA

EST sequence (targeted fragment marked with yellow):
ACTAGTGGATCCCCGGGCTGCAGGTTTGCAGAAAACGGCATGTGTATTTTTTTCGATTCTCACAGCCCTATCATTTCAAAATACATGAAATGAGGGAAACCAAATCATTTCACTTGTGCTTAATTTGATGAGTTCTAATTCTCATTCCTTTCTCTCGCTTGTCATCAAACCTGTAACGGCGCTGCAGCGACAAGCTATGAATATAAATAGCAATGGCGATGAAATCCTAGGCGGCTGCCATGATAAGCTTTTACAGCGATGGAGGCTAAATCCTTACACCATCCGTCCATCATATTAAGGGCTTTTGCCAGGATGTGACATATCATAGTACAACGAATCTGGATAGACTCTCTACCCAGATTGTTGTATTAGGATGTGCCACATCCTGCCAAATAACCTTATATTTGACGACGGAGGGAGTAAGAGACAGCCACTATTACAGAAAACCTCATAGGTGCCGGTTGGGAATCGGCCATAGGTGCCGGTTGACACCTGTACCCGAAATTATAGGTGCCGGTTTTAGAACCTGAACCTATAAGGCATAAGGGGAACAAAAAAAAAAAAAAAAAAA



gi|88538830|gb|CI467891.1|CI467891 CI467891 Oryza sativa (japonica cultivar-group) 30 days after pollination pistil Oryza sativa

TTGTACTAGGATGTGTCACGT
| ||||||||||.||.|||.|
ATCATGATCCTATACGGTGTA

EST sequence (targeted fragment marked with yellow):
ACATGTGACGATGTTTGTACCTAATTATTTTGTACACCAAAGTTTAAACCACTGAATGCGCTCAGAAAGCTTATCAATATATGGCAGAACAGATAAGGCCCGCCATGTATATTGATCACAGTAAGGGAACAAGTAGACACTCCCTCCGTCTCATAATAAGTTAATTTAGTACGAGATGTGGCATATCCTAGTACTACGATTTTGGACAAAGACATGTCTAGATTCGTAGTTCTAAGATATGTCACGTCCCGTAATAGAGTAACTTATTTTCTGACGAAGGTAGTATATGTTAAGAAAAGCATATACATGCACATAAATTGCTCCAGAATAATAAGACTAATGGTAATACATCAATTATAGATAATGAACATTGAAACCAAAATTCTGCACATGCACTTTC



gi|86825040|gb|CI358211.1|CI358211 CI358211 Oryza sativa (japonica cultivar-group) flower Oryza sativa Japonica Group cDNA clone

TTGTACTAGGATGTGTCACGT
||.|||||||||.|||| |.|
AATATGATCCTATACAGGGTA

EST sequence (targeted fragment marked with yellow):
GCAAGCCCGGTCACTCTATTTGGCAGTATTATACCGGCATGTCAGTGTGGTATCATCACAAGGTTCAAAACTAAAGACATTATTACACTTGGTTTATTTTCAAATTATCACAGGCTCCAAACCTGATATGAAGCTAAACTTGTGAAGCTGGAAAAAGGTACTCCCTCCGTCCCAAAATATAGCAACCTAGTACTTGGATGGGACATATCCTAGTATAACGAATGTGGACATACTAGGTTGCTATATTTTAGGACAGAGAGTATGTATTTTATAGGGCAGATCCACCCACTCCGGCTCCAGGCTCCAGCTCCTCGGACAAGATAGCGGTTGGAGCCATGTCAAACATGCCCATAATATATAAAAAATAACTTCCAGCTGCTCCTTGTATTTCTGATATTGTTCCAGGAGATCCACTGGGCAATTAGTAT



gi|88275118|gb|CI395722.1|CI395722 CI395722 Oryza sativa (japonica cultivar-group) seed Oryza sativa Japonica Group cDNA clone J

TTGTACTAGGATGT-GTCACGT
| |||||||||||| |||||.|
ATCATGATCCTACATCAGTGTA

EST sequence (targeted fragment marked with yellow):
GAATTCTACAAATACTTATATTTGATAAAAGAGAGAGTAGTACATATATTTTCCTACTGTGAGCATTTTTCAAATTTAATATATTTTGACGAATGATTCACATCTACTCCCTCCGCTCCAGATGTGACTACATCCTAGTACTACGAATCCGGATATACATGTCTAGATTTATAGTGCTATAATATGTTACATCATGTTCTAGATTTGTTTTTAATAGGACGGAGTATACTATATCCGACCGCTCGAAGAATTAGAGACATTCGTGCTTCATCTTGTGATGTAGCCAACGAAGTCATCCAA



gi|88906720|gb|CI375792.1|CI375792 CI375792 Oryza sativa (japonica cultivar-group) callus Oryza sativa Japonica Group cDNA clone

TTGTACTAGGATGTGTCACGT
|||| |||||| | |||||.|
AACAAGATCCTCCCCAGTGTA

EST sequence (targeted fragment marked with yellow):
CAATAATGCAAGAATGCAACCTAACTAAATAATAAAAATAATAATAATGTTTCACTAATTTATTTTCAACTGTACGTCTGTGCGAAAGAAAAAAAAAGCTTTTGTGGACAAAAATACAGTAACTAGCTAGTTTTCTATATCCACACTAAACACATCGAACATACTCCATCCGTCCCAAAAAAAAAAAAACTCAACATAGAAGGGGATGTGACCCCTCCTAGAACAACGAATCTGGATTATCCTTAGGTTGAGTTTTTTTTTTTGGGACACTGCTTACTACTGAGACAAGTCCTACACTCCTACTAGAGAGGCAAAACCTTTGCTTTGGTTATTTAGGAAACCATAGTTATTATACTTCTGACCATGCAGCACAGGGGACTGAAGATCTTATAAGTTGGCACGGAAATATTTCCGTGACTCCTGCTGTTTTATGCTG



gi|87034821|gb|CI189445.1|CI189445 CI189445 Oryza sativa (japonica cultivar-group) root of seedlings Oryza sativa Japonica Group

TTGTACTAGGATGTGTCACGT
||||| |||||||||||||.|
AACATAATCCTACACAGTGTA

EST sequence (targeted fragment marked with yellow):
CCAATGTACTAGATGTGACACATCCTAATACAACAAATCTGGACATACATATGTCCAAATCCATTATACAAAATATGTCACATCCAGTACTAGATTTACTTTTTTTTTTAATGGAGGGAGTAACTTCTAAAGATAAATTATCTAGGTTCGTCTCTAAAATTTACATTATCTTTTTTTTACAGGAGTACTAATACTAATCACTTCCGATTAGACCAGTCCAAACTCCAAAGTGCAAACTCCAAGAAGAACCCTAAAAGTACAGCTAGACGGCCAAGGAAGCAAACAAAAAAGGAGAGATCAGCAAAGAAAGCCGAGAAAACCTGGCACAGCCAGCCAGCCAGCTACCCATGACATACACATAAAAAAAAAGAAACAAAAGCAGCTTGAGATGTCTCTTCCTCTCCGATGGNCACCCAAAAGNCCCTCTCTTTTTCTCCCGGAACCCCTCCTCCCCAGTCTCCAACTCCACCATTGGGCTCATCCAGCCATCGCCCACTTGGCTCTAGGTTCATCCCCAAATATTTTCTTCTCAAGGTTTATTATAGCATTTCATTTTTTAGAAGAGTTCACAAACAGGAGTAGATACAAGAACATTCAGGATGAGTGTTGATCCAT



gi|66914036|gb|CX100884.1|CX100884 RECm1803 A normalized whole-life-cycle cDNA library of rice Oryza sativa Indica Group cDNA cl

TTGTACTAGGATGTGTCACGT
|||||||||||||||| .|
AACATGATCCTACACATCATA

EST sequence (targeted fragment marked with yellow):
AAGTCACTGTGATCGAAAGGAAAAAATACGAATATTTTAATTAGTTATTATTAAGATATCCGAAGAATATTCTGAAATATCCTAAAAGTTCAGTTTTCGTATTTATTTAATAATTTTAAACCCCTATTCACCCCTAGGCGACGTCAAGAAACTTTTAGATACTACACATCCTAGTACAATGGAGAGAGTAGTATCATGATGTACAACCTAGTCATTTGTGTTGGTAAAATTGTAGGATATATAGATGTGCCTTGTAATTATGCACTGTTATAATTTCTCCCGGCAATAGATTGATTTTTGCTGATTTCAACTTTAGGGTTCAGCTGCTTTATAGATTGATTTTTGCTGATTTCAACTTTAGGGTTCAGCTGCATTGTTGCAATAACCAGGGTCCAAATTATCGACGTGTGTAGCGATAACTGTTCTCAATTTGGGGAAAGTAATTAGGGCTAATTAACTGAATCCCACGATGAACGCGAGGCGCCGGAACGAGGAGACCCGCCGACGCCGCCGCCGCCTGGCCATGGCGAGATCGACGACGACGCTGGACGACATCCCCGAAAACCTCTTGAAGCACGTCTTCGTCGGCTCTCCTCGACGGTCTGAATCGTCCGGGCCGCGGGAAGTGCAGGCGGTG



gi|88478060|gb|CI415331.1|CI415331 CI415331 Oryza sativa (japonica cultivar-group) 14 days after transferring callus Oryza sativ

TTGTACTAGGATGTGTCACGT
||||| ||||||.||.|| .|
AACATTATCCTATACGGTATA

EST sequence (targeted fragment marked with yellow):
AACTGAACAAGGAGTAATTTACATCGTAAAATGGGGAATGCCCCAAAGATACATGTAGAGTAGTATAAAATAATTAAATTTATGAATATGGTGGTAAAGGAAATGGAACACAACCTGTGCGCTAACCATCTGGGTTCCTAAATCTTATTTTATACTCCCTCCGTCCCTTATAGATTTGGCTTGGATATGGCATATCCTATTACAACGAATGTGGACATGAAGTCTGTCCAAATTCGTTGTATTAGGATGTGTCACATTCAACCAAAATTCTTTATATTTAGGGGCGGAGGGAATACCAAGTTCCTAAATCTTATTTTATACCAAATATTAGAACTTACACTTGGACAAAAAAAATATATCATTGTCTGTTTTACCGAGTTCCTCTCATTCAAAAGATGACAT



gi|86505529|gb|CI148162.1|CI148162 CI148162 Oryza sativa (japonica cultivar-group) mixed shoot (Normalized Library) Oryza sativa

TTGTACTAGGATGTGTCACGT
||.|||||||| | |||||.|
AATATGATCCTCCCCAGTGTA

EST sequence (targeted fragment marked with yellow):
TTTTTTTTTTTTTTTTTTTTTTTTTTTGGCACAAAGGAGTACAGCAACTCAAATTGGTCGCCAACTCTCACCATTTTTTCTGAATTCCAGGTGTTTCTGATCTCCTCTGGTTCGTGATTCTGTCCGATTTTTCCATTTACATCCATACACATTCTCTGGCCTCCTTCTAAAAGACGATGTCGCTTTTATTATTTTTGGCTATTGCGTGGAGGGTTGGAACCTTCCACTTTCGTATATAGTAAAAAGAAAAAAAATATTAACTGCATACTTTTTTTAAAAAAAAAACCCAACCTAAAAATGTGACCCCTCCTAGTATAATTCAGAATCGTTGTACTGGGAGAGGATGGGCTTTTTTGGGACGGAGAGAGTAGTAAGTTGCTCATCTTCTAGTCTACGTCTCCGGATTAATATCTTCCCGATTCATAATGCGACGAAGGGTTTCACCGGGCCGGAGCTCGCCGCCGTTGAGGAAGTCGGAGTACCACCGTGCCGAGCTCCTGACGTACCTCGTCCTCGCCGGGCGCGGTGAAGTCGACGCAGCACAGGCCAAAGCGGTTGCCGTACCCGGAGAGGAACTCGAACCCGTCGAGCAGTGACCACACGAAGTATCCCCGCGTGTTCGATCCGTTCCGTATGGACAGGTGCAGAACTTCCAGGTAGCTCTGCAAGAAATCCGATCTAAAGTCG