miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse




mature miRNA: TTGTGGCTTTCTTGCAAGTGT
species: Oryza sativa
database: miRNEST
The numbers on the right side of the alignments show a score calculated for them.
When calculating the score, a mismatch is given a score of 1, bulge: 2, and wobble: 0.5.

Predicted miRNA targets
gi|88340398|gb|CI659604.1|CI659604 CI659604 Oryza sativa (japonica cultivar-group) callus UVB iradiated callus, 24hr after treat

TTGTGGCTTTCTTGCAAGTGT
||||| |||||||||||||.
AACACGGAAAGAACGTTCATT

EST sequence (targeted fragment marked with yellow):
ACTGCGCCAATTTTCCTGCCTTTTCTACCCCCCACTTGGAATTCTGGAAACATCGATTCGATCCTTCTAGACCCTTCTCCGCCCCCGTTTTAAAGTGCGCCGGCCTCCCACCCGTCGCTTCATCGCTCGCGGTCGCAGTCGCAGTCGCCCACACCCTTGCCGCACCATGGCTGGAACCCGCGGCGGATTCGAGTTATTGCACATGGTGGCACCAAGCATGAGGCAACAACTGCATTACTTGCAAGAAAGGCACAAAATCATTAGATGATTACTTGTGGCTTTCTTGCAAGTTGTGCAGTTGCTGCCTCAAGCTTGCTGCCTCCCTCTGCCAAATCTATCAGCAAAAAAAGAAAATCATGTCAGTTTCCTTGAACTATATACATATGATTAATCTAGAAACGCAGTATGT



gi|117210894|gb|CT855447.1|CT855447 CT855447 Oryza sativa (indica cultivar-group) cv. Guang Lu Ai 4 Oryza sativa Indica Group cD

TTGTGGCTTTCTTGCAAGTGT
||||| |||||||||||||.
AACACGGAAAGAACGTTCATT

EST sequence (targeted fragment marked with yellow):
ATGAATCGCTCGCGGTCGCAGTCGCAGTCGCAGTTGCCCACACCCTTGCCGCACCATGGCTGGAACCCGCGGCGGATTCGAGTTATTGCACATGGTGGCACCAAGCATGAGGCAACAACCGCATTACTTGCAAGAAAGGCACAAGTAAGACCTCTCACAAGTAAGACAGTAAACTCATGTAGCTCATTCTTATATGTATTGTGTAATTCTTCCGTGGTTCTGTCACAGAAGACCAATCTATACCAAGTGATGGTAATTATTGAATTACCTTTTTCTTTGGAAATAATTAGTTTTGGAACTCAAAGTTGATAGCACCACTTTTAATTCAAAATCAATTAAATACAGGCATTACCATTTTAATGTGGTAAAAAAAAAAAAAAAAAAAAAAAGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGGAAAAATTGGCAAAAAGGGGGGACCCAGTCCCAAATTCCCCTAAATGTGATTAAAAATACCCGCGCCTCCTGGCCCCCCCGGGGGGACCCCGGACCCCGCCAACCCCCTGGGGGGGGCCAATAATCACCCGCCTATGCGGCGGGATCCTTTTTTAGCAGGGGGGGGGGAGAAAAAAAAAGGGGCTCCCAACCATTACCCCTTTCCCGAAAAAAGAGCCCCCCCTTTTGAAGGGGGGGGGGGAAAAAAAGAAAAAGGAGCCCGCCCCCAATATAGCCCCTCCTCTCCAAGAGGGGGGGCGCTCCCCCCCAAAAAGGGGGAAGAGGGTACCCCCCCCCCCCCACACCCCCCCTAACTTCATTACCCGCGTTTGGGGGGGGGGTGGGGTCCTCTCCCCACCCCACAGGACACACACCAATAAAGAAGGTATTTCCCCAAGCAGTAAGAGCCCCTCCAAATTTGTTTTGTTTTTTTTTATTTATTAATTATGGGTTTTTAATAAAAAGAGGTGTGGATTCGGGGAGGAAATTCTCTTCCCACCCACAAAAAAAAAAAAAAAAGAAAGAGGGGGGGCCGTGCTCGTGTTTATGGGTGTTAAAATGATATATTGTTTGTGTTTGTCCTTCCATCAAACCCCACCCCCTTCCTGCTCCAACAAAAATATAATGATATGATAGTGGTGGGTGGGGTGCGGTGTGTTTTTTTCTATATATGTAGGAGTGGGTGCAAAACCCCCCCCCCGCGACACGAAAAAAAAAGAGAACAGGAGAGAAAAGTTCCTCACACCCCCCCCCCACTCGACGTTCAGAGTGAAGGTGAGTGGGAGGGGGCGGGGGCGACCTCTCACATTTTGTTTTTTTTTTTTTTTGTGTTTTATATTTTAGTATATGATTGTATGAAATGAAGGAGAGGCGTCC



gi|88260711|gb|CI363004.1|CI363004 CI363004 Oryza sativa (japonica cultivar-group) flower Oryza sativa Japonica Group cDNA clone

TTGTGGCTTTCTTGCAAGTGT
|| ||||||||||||| ||||
AAAACCGAAAGAACGTCCACA

EST sequence (targeted fragment marked with yellow):
CGGGAAACCCTTTTTTTTTAATGTTTTATTTGAATGACATCTTTGAATGCATATCATGAGTGGAAGAACTGGGCGGCCAATGACTGGGCAGGGTGATCATCCCAACTTCCTTCAAGCAACTCATGTCTAACTAGAAAAGAAAAAAAAGAAGAAAATAAAAAGATTATGTACAGAAAAAAGGCCATCATCACAACATGGACCTCTGGCACAGGCGATAGCAGTTGTTGCTCAAACCGTATTGGAAGCCTGTAAAAGGATGGGTTTTATTCTACAGTTGCATAGCTCGAACACCTGCAAGAAAGCCAAAAACAAAC



gi|86518057|gb|CI158263.1|CI158263 CI158263 Oryza sativa (japonica cultivar-group) Panicles mixture of one, two, three weeks aft

TTGTGGCTTTCTTGCAAGTGT
|||||||||||||||| ||||
AACACCGAAAGAACGTCCACA

EST sequence (targeted fragment marked with yellow):
TTTTTTTTTTTTTTGGATCACATCAGGAAACCCTTTTTTTTTAATGTTTATTTGAATGACATCTTGAATGCATATCATGAGGGGAAGAACTGGGCGGCCAATGACTGGGCAGGCTGACCATCCCAACTTCCTTCAAGCAACTCATGTCTAACTAGAAAAGAAAAAAAAGAAGAAAATAAAAAGATTATGTACAGAAAAAAGGGCATCATCACAACATGGACCTCGGGCACAGGCGATAGCAGTGGTGGCTCAAACCCTATGGGAAGCCTGTAAAAGGATGGCCTTTATTCTACAGCTGCATAGCTCGAACACCTGCAAGAAAGCCACAACCAAACAGCAGCAGCCAAACCACAAGTATTCTTCACCTCCCCTACTCCTGGGCTAACTCAAAACGGGCAAGAAGTGCCAAGCCTCTGCCTTGCCCTTGGCCCCGCAGCGCCGCACTTGCGCGAGCGGAATGCCTCGGGAAGGAGCTCCTGGAACTTCTCGAGGAATAGCGCCCATGTCTCCGATCCCATGT



gi|66925602|gb|CX112450.1|CX112450 EI076B09 A normalized whole-life-cycle cDNA library of rice Oryza sativa Indica Group cDNA cl

TTGTGGCTTTCTTGCAAGTGT
|| |||||||||| |||.||
AAAACCGAAAGAAGGTTTACC

EST sequence (targeted fragment marked with yellow):
ACGGCTCCGTCAGTCGGCGGACTCCTGGTGACCACGCGTCTGGGCGAGAGAGACACTCTCACTGAACGAAGCTACCTACTTATTACCTAGCTACTCGATCGATCATCAGTCTAGATATTGCGGTTTGAACGGTAAGGTGGTGGTGGCGGTGATGGTGGTGGCGATGGTTGTGGCGGCGCCGGGGGCGTCGGCGGCGATCACGTGCGGGCAGGTGGGGTCGGCGATCTGCGCCGTGCATCTCTGTACTGTGACTGGGGACGGGGCTGTGCCATCACCCATGTGGGAGTGCGTTGCACACCCGGAGGACCCGGGAATTTTCTAAAAAACATGGTGGGGTGGCGGGCCCATTTGGAAGAAAGCCAAAAAAAACCGGGGCCCCCTGGGCCCCCCCATGACGGAGGGCGCGAAAGGCGCTCATGGGCTCCATGGAAACACCATGCACCAAATGGAGGGGCCCCCCCTTGGGCGACCCCATATTTGGCGCCGTGGTGGGTTAGCGCCGGTCTAAGAGGTGGAAACCCCCGTTCCGGGCGCCTGTGCGAACCCGGAAATCTAAAATTGTTCTTCCGTTCAAAAACCCTTTCTTGTGCCTGCCCTGGTCCCTGCCCCTGGGCTAGTCCCCCCAGGTGCAAAATGGTTGGAGTGCAGTTTCAGAAACCCAGTTCACGTGCGTTTTCCCCGCGAAGTCAATGGCCCGTCATTCCCAACCGTTGACCTTTTGCCCGAAGTGGCCAAAAGGGGGGATTCCCAAGTGCGTTTTAAAAAAGGAATTCGAAATATAATTCTCGTTGTCTTTTGGGAAGCCGGGACCGGAGTTCGGAGTATTAGTCTGAAATCCGAGATGACTTGGGCGTCGGCAAGGTTTGGAATCAGAACGTTATGCTCGAAGATGGTTAACTAATGGCTAAGCAGGTTTAAGAGAAATTAAATCAAGCGCTGGGTGGGC



gi|117215686|gb|CT861533.1|CT861533 CT861533 Oryza sativa (indica cultivar-group) cv. Guang Lu Ai 4 Oryza sativa Indica Group cD

TTGTGGCTTTCTTGCAAGTGT
|||||| ||||||. || |||
AACACCCAAAGAATTTTAACA

EST sequence (targeted fragment marked with yellow):
ATGCCACGTCAGCAAAACTATTTCTGCTAAGCTATCAAACTCCCCCGCAAGAAGGAGGAGAAGAACACTACACACACCATTTCATTTCATCTCATCTCCTTCGGCTTCTGAATCGATCGGGCTCACGTCGACATCGCCGCCACATCGGAGCTAGCGCCGGCGCCGTCGCGGCCTCCTACTCTCCTCACCGGCGTCTCCTCGAGTCGATCGAGATCCAGCGCGCGCGGCGGCTTGGACGTGGCCGGAGCCATGGAGACCTATCGGCGGCGACGCCATCGGCCCGGACTCCTACGGCATCGGCCCGAGCTTGAGCTTGAGATTGCACCAGCACCACATCGGTGTGGGCGGCGCCGGCGACCAGACCACGGTGTTCGCCGGCGGCGACACGCTCGCCGCGAACTACCTATACAGCTACGCGACACCGGTTGCTTACTCTGCTCAAGATTGGCACCGCATCGATGCGGGGGGCGGCCAGAACACGGTGTTCCCCAACGTCGACCACGCTTTCGGCGTGCTCGCCCCTTACTTTGCTACGGCGGATCTCCATCACATCGGTGGAGGTGGCGACCACAACACGGTGTTCTTCCCCAACATCGACGCCCCCGCCATGAACGCTTTCACCCGCGCCGCACCAAACCAGTACTCTGCTGCGGAATTCGACTACAACGGTGTAGGCCACGAGCAGAATTACAAGGAATTCTACTACAACGGTGTGAACCCGTGTCCAGAACATGAGGCCCCCCAAAATGGACAACCCTCACCGGGATGCCTTTCACCTTCACTTCACCCGGCCATTAACTCGGCTGGGGAAATCTACTCCCATGGGGTTGGGGGGAAACCAAAAATTTGGAGGAATTCTCGTGCACCTAGTTGGGGAGGCCCGACCAATTCCCCCGCTTTGCTTCCTTTATATTTTTTGCGGGTTCTTTACCCCAAGGATTTCTTTTAAAAAATATATAAAAAGTTCCCCCATTGGGTAAAACAATTTTAAGAAACCCACAATCTTATCTTTTTCGATGTCTTGCAACCGAACCCCACCGCCCCTCCCTCGTTGATTGCTTGCCCCCCACCCATATAACGGTGTCTGTTTAAT



gi|88266144|gb|CI377046.1|CI377046 CI377046 Oryza sativa (japonica cultivar-group) callus Oryza sativa Japonica Group cDNA clone

TTGTGGCTTTCTTGCAAGTGT
|||||||||||||||| ||||
AACACCGAAAGAACGTCCACA

EST sequence (targeted fragment marked with yellow):
GATCACATCAGGAAACCCTTTTTTTTTAATGTTTTATTTGAATGACATCTTTGAATGCATATCATGAGTGGAAGAACTGGGCGGCCAATGACTGGGCAGGCTGATCATCCCAACTTCCTTCAAGCAACTCATGTCTAACTAGAAAAGAAAAAAAAGAAGAAAATAAAAAGATTATGTACAGAAAAAAGGCCATCATCACAACATGGACCTCTGGCACAGGCGATAGCAGTTGTTGCTCAAACCCTATTGCAAGCCTGTAAAAGGATGGCTTTTATTCTACAGCTGCATAGCTCGAACACCTGCAAGAAAGCCACAACCAAACCAGCAGAAGCCAAACCACAAGTATTCTTCACCTCCCCTACTCCTGCGCTAACTCAAAAGTGGCAAGAAGTGCCAAGCCTCTGCCTTGCCCTTTGCCCCGC



gi|66913257|gb|CX100105.1|CX100105 RECm0919 A normalized whole-life-cycle cDNA library of rice Oryza sativa Indica Group cDNA cl

TTGTGGCTTTCTTGCAAGTGT
.| ||||||||||||||||||
GAAACCGAAAGAACGTTCACA

EST sequence (targeted fragment marked with yellow):
CAGCGGAGGGACGGTCGGAGATTCCGGGTGACCACGCGTCGCTCTCTGTCTCTCTCTCTCGGGGTATTGCAAGATAGTAGCTAATTAACCAGCCTTTGGCCTTCAGTTTCCCCATCGGTTCATCAGAGCACGCCTTCAATTTCCTAATCAATCTCCCATATAATTCCCCTTAGCTTGTATGCCTATCATTAGTACTTCTTGTGTTGTGTTGTCTTCTTGCCTTCTTTGAGCTAGAGCTAGCTAGGTTTGTGACCTGCTGTACGTGCGTGTGTTAATTAGATAGATGTCTTAGATCTGGGAGAGAGCGAGGAGATGGGGAGGGGGAAGATAGTGATAAGGAGGATAGACAACTCGACGAGCAGGCAGGTGACGTTCTCGAAGCGTCGGAACGGGCTTCTGAAGAAGGCGAAGGAGCTATCCATCCTCTGCGATGCGGAGGTCGGCCTTGTCGTCTTCTCCAGCACCGGCAGGCTCTATGAGTTCTCCAGCACCAACATGAAAACTGTGATAGACCGGTATACCAACGCAAAGGAGGAGCTACTTGGCGGGAATGCACTTCAGAAATCAAGATTTGGCAGAGGGATGCCGCCAGCTTGAGGCAGCAACTGCACACTTGCAAGAAAGCCAAAGGCACTGATGGGTGAGGAGCTTCTGGCCTAGTGTTAGAGACTTACAGGCTTCCGGATCGGGTGAAATCAGCTACGTATATCCAATGGAACGGCCCCCTTTGCACAGGAACCCGGGCTCCTGTGAGGGGACCTATTCCAGGAAAATGAATCTTAAGCTAGTCGTTGACAAAGGGGGGTTACGCTGGCGGAACAAGGGCGGTTGTAGATGACCCAGGTGGGATCAGGCTGTCTCTCTTAGACACAGAGNGAGGATATCACTAAGACACCGCGCCATTCGTGCGCAGTGATAGTACCTCAGCTCAGGCGACTAGGCGTGCTGGCGTCTAATCAGAGAGGTAGCAGCAGATGACTGGTGAGTAGAGG



gi|41884381|gb|BX929212.1|BX929212 BX929212 Oryza sativa library (Han B) Oryza sativa cDNA clone y787h05p5, mRNA sequence

TTGTGGCTTTCTTGCAAGTGT
||||||||||||||||||| |
AACACCGAAAGAACGTTCA-A

EST sequence (targeted fragment marked with yellow):
CCATGTGTGGTACCCGGGAATCGGCCATTATGGCCGGGAATGCACTTCAGAAATTAAGATTTGGCAGAGGGAGGCAGCAAGCTTGAGGCAGCAACTGCACAACTTGCAAGAAAGCCACAAGCAACTGATGGGTGAGGAGCTTTCTGGCCTAGGTGTTAGAGACCTACAAGGTTTAGAGAATAGGCTTGAAATAAGTCTACGTAATATCAGAATGAGAAAGGACAATCTTTTGAAAAGTGAAATCGAGGAGTTACATGTGAAGGGAAGCCTAATTCACCAGGAAAACATCGAACTTTCTAGAAGCCTAAATGTCATGTCGCAACAAAAATTGGAGCTGTATAACAAGCTTCAGGCCTGTGAACAGAGAGGTGCCACAGATGCAAATGAAAGTTCCANGCACTCCCCATACAGCTTTCAGTATCCATTACAAAATGCTAACTATTGCCTCCCTAGTCTCTGAATTGGAGCCCAATCACAGCCAAAGCAGAAGGGGCAGTGCAAGCACAAACACGCTGTCTCCAGACACTGGCGA



gi|44665834|gb|CR279268.1|CR279268 CR279268 Oryza sativa library (Han B) Oryza sativa cDNA clone y708b03p5, mRNA sequence

TTGTGGCTTTCTTGCAAGTGT
|||..|||||||| |||| ||
AACGTCGAAAGAAGGTTCTCA

EST sequence (targeted fragment marked with yellow):
CATGTGTGGACCGGGAATCGGCATTATGGCGGGGTGCTCAAGACAGATTACAGGCAGGAATCCAAAGGCAACAGATTCTGCTTCAGATCTGAGCAGCATTCTTGTGAAGCACGTGTCGAAGCTTGAGAAGGAGATTCTAGAAGCGAAGAAGAATAATAACACACGCATTCAACTCTTGGAAGAAAGCTGCAAGAAAGTAGAAGCGCAGGTGGCGAAAGATGCCAGCAAAGAATCTGAATTTTACAATGCTCAGTCAGAATCCTTCTGTAACAGTGGTTCCGTGGGGAGTTGTAATTCCAGGGAATCATATGATGAAAGCAAGCACGGCCGAGATTGTTCACAAGACAAAGAGAATAAAATTTTATTTTCACATCAATTACCACCGTCTGGTGCAAAAGGTAAACAGGGAGGAAAAAGCATAACTAGGATTGAAGCTGCCAAGCTGGAAGCACTTAATTCTTTCTGTACTAAAGATGGCAATGCATTTGATGTTGGCCTTGATAAGATCTTAATCAGGCCAATCCATCGATTGGCGAGGTCCAACCGCACCAACACAAACACACACAACATGTCGGGCGCCTCGGCCAGTCGACCTAGACCCGACAAGCTATGATTGGGCGGCATCGAGCCACATGGGCAACGGCCCAAGAGAAGGCAACACAACCAGGCGGCGGATAAAACCCCGCCGGAGGCCCGCGGGCCACACAAAGAGCGAGAGAAACCCATGGGACGGGGAAAGCAAGCCACACGGGCGCCCAG



gi|58691380|gb|CK080067.1|CK080067 78321rsicen_20618.y1 Oryza sativa cv. LYP9 booting whole plant cDNA library Oryza sativa Indi

TTGTGGCTTTCTTGCAAGTGT
| |||||||||.||||| ||
ACCACCGAAAGGACGTTAACT

EST sequence (targeted fragment marked with yellow):
GGGATGGTGAAGCAGCAATAGATTCCATTCCCTTTTGTCATTCTNTGGTTCAAGTCGCGGTGCTACAAACAATGAAAAGCTCAAGCGATTTATTAAAGATGATATGCTTCCTGCTATAATCCGACGCCTATATGATGATCTTCCATGTGCAGTTCAAAAGACCATCAGAAAGTTATCTCCCTTGATGAACTCAATCAATTGCAGGAAAGCCACCAAGGATCTCTTGGTTCTATGTCAGGAGATCTATAAAGTTTACATACGATGTCAGAATTTGGAAGGTGAAGACCAGGATACTGATAACATAGCATACTGGTTTGATGATTGGTTAACAAAGCAGAAGAAAGAACTTTGTGTAAAGGCATCCTATGCTATTCCTGATGAATTTCCAGCTACGCTGTGGAATTGGGAGTTTGAAGAAGAATTTC



gi|88835803|gb|CI370908.1|CI370908 CI370908 Oryza sativa (japonica cultivar-group) callus Oryza sativa Japonica Group cDNA clone

TTGTGGCTTTCTTGCAAGTGT
|||||||||||||||| ||||
AACACCGAAAGAACGTCCACA

EST sequence (targeted fragment marked with yellow):
GTTCAATGATCACATCAGGAAACCCTTTTTTTTTAATGTTTTATTTGAATGACATCTTTGAATGCATATCATGAGTGGAAGAACTGGGGGGCCAATGACTGGGCAGGCTGATCATCCCAACTTCCTTCAAGCAACTCATGTCTAACTAGAAAAGAAAAAAAAGAAGAAAATAAAAAGATTATGTACAGAAAAAAGGCCATCATCACAACATGGACCTCTGGCACAGGCGATAGCAGTTGTTGCTCAAACCCTATTGCAAGCCTGTAAAAGGATGGCTTTTATTCTACAGCTGGATAGCTCGAACACCTGCAAGAAAGCCACAAACAAACAGCAGCAGCCAAACCACAAGTATTCTTCACCTCCCCTACTCCTGCGCTAACTCAAAACTGGCAAGAAGTGCCAAGCCTCTGCCTTGCCCCTTTGCCCCGCAGCGCCGCAATTGCGCGAGCGGA



gi|88374706|gb|CI518573.1|CI518573 CI518573 Oryza sativa (japonica cultivar-group) after pollination embryo Oryza sativa Japonic

TTGTGGCTTTCTTGCAAGTGT
||||||||||||| || ||||
AACACCGAAAGAAAGTCCACA

EST sequence (targeted fragment marked with yellow):
CACATCAGGAAACCCTTTTTTTTTAATGTTTTATTTGAATGACATCTTTGAATGCATATCATGAGTGGAAGAACTGGGCGGCCAATGACTGGGCAGGCTGATCATCCCAACTTCCTTCAAGCAACTCATGTCTAACTAGAAAAGAAAAAAAAGAAGAAAATAAAAAGATTATGTACAGAAAAAAAGGCCATCATCACAACATGGACCTCTGGCACAGGCGATAGCAGTTGTTGCTCAAACCCTATTGCAAGCCTGTAAAAGGATGGCTTTTATTCTACAGCTNGCTAGCTCGAACACCTGAAAGAAAGCCACAAACAAACAAGCAGCAGCCAAACCAAAAGTATTCTTCACCTCCCCTAATCNTGCGCTAANTCAAAAATGGCAAGAAGTGCCAAGCCTTTGNCTTGCCCTTTGCCCCGCAGCGCCGCATTG



gi|88996601|gb|CI389267.1|CI389267 CI389267 Oryza sativa (japonica cultivar-group) callus Oryza sativa Japonica Group cDNA clone

TTGTGGCTTTCTTGCAAGTGT
|||||||||||||||||||||
AACACCGAAAGAACGTTCACA

EST sequence (targeted fragment marked with yellow):
CGTATCAGGAAATCCTTTTTTTTTAATGGTTTTATTTGAATGACATTTTTGAATGCATATCATGAGTGGAAGAATGGGGGGCCAATGACTGGGCAGGCTGATCACCCCAACTTCCTTAAAGCAATCATGTCTAATAGAAAAGAAAAAAAAGAAGAAAATAAAAAGATTATGTACAGAAAAAAGGCCATCATCACAACATGGACCTCTGGGAAAGGCGATAGCAGTTGTTGCTCAAACCCTATTGCAAGCCTGTAAAAGGATGGCTTTTATTCTAAAGCTGCATAGCTCGAACACTTGCAAGAAAGCCACAACCAAACAGCAGCAGCCAAAACACAAGTATTCTGCACCTCCCCTACTACTGCGATAAGTCAAAACTGGCAAGAAGTGCCAAGCCTCTGCCTTGCACTTTGCCCCGAAGCGCCGCACTTGCGCGAGCGGAATGCTTG



gi|58590329|gb|CF988637.1|CF988637 19988rsicee_1346.y1 Oryza sativa cv. LYP9 tillering whole plant cDNA library Oryza sativa Ind

TTGTGGCTTTCTTGCAAGTGT
||||||||||| ||||||||
AACACCGAAAGCACGTTCACT

EST sequence (targeted fragment marked with yellow):
GCCAAGTTAGGCACATGTTTGTCAAACCACGGGCAGCGGCATGTACTCCTAGTGTGTAGACGGTCACTTGCACGAAAGCCACAAGTCCTCGGTGCACGTCTGAGCAACTGCGCCGATCCATATGCCTGGAGATCATTATTCAATCTCGTATATGCAATCAAAACGATGTACCTCAGGGCACATGCCATGATCAGTGCTGCGTGGTCAGACATGCATCCCGGAGCACTGTGATGCCCATCCTCATGACTGATCGTGTCGTGTGCTCATTGTCGTGCAGGAGGAGGCGGCGGCCGGCGGCGGCGAGGTGTGC



gi|88375193|gb|CI523458.1|CI523458 CI523458 Oryza sativa (japonica cultivar-group) after pollination embryo Oryza sativa Japonic

TTGTGGCTTTCTTGCAAGTGT
|||||||||||||||| ||||
AACACCGAAAGAACGTCCACA

EST sequence (targeted fragment marked with yellow):
CACATCAGGAAACCCTTTTTTTTTAATGTTTTATTTGAATGACATCTTTGAATGCATATCATGAGTGGAAGAACTGGGCGGCCAATGACTGGGCAGGCTGATCATCCCAACTTCCTTCAAGCAACTCATGTCTAACTAGAAAACAAAAAAAAGAAGAAAATAAAAAGATTATGTACAGAAAAAAGGCCATCATCACCACATGGACCTCTGGCACAGGCGATAGCAGTTGTTGCTCAAACCCTATTGCAAGCCTGTAAAAGGATGGCTTTTATTCTACAGCCTGCCTAGCTCGAACACCTGCAAGAAAGCCACAACCAAACAGCAGCAGCCAAACCACAAGTATTCTTCACNTCCCCTACTCCTGCGCTAACT



gi|117219492|gb|CT858661.1|CT858661 CT858661 Oryza sativa (indica cultivar-group) cv. Guang Lu Ai 4 Oryza sativa Indica Group cD

TTGTGGCTTTCTTGCAAGTGT
|||||||||||||||||. ||
AACACCGAAAGAACGTTT-CA

EST sequence (targeted fragment marked with yellow):
ATCTCTCTCCTCCCTCTAAAACTCTCTCTCTCTCTCTCTCTCTCGCGGGGTATTGCAAGATAGTAGCTAATTAACCAGCCTTTGGCCTTCAGTTTCCCCATCGGTTCATCAGAGCACGCCTTCAATTTCCTAATCAATCTCCCATATAATTCCCCTTAGCTTGTATGCCTATCATTAGTACTTCTTGTGTTGTGTTGTCTTCTTGCCTTCTTTGAGCTAGAGCTAGCTAGGTTTGTGACCTGCTGTACGTGCGTGTGTTAATTAGATAGATGTCTTAGATCTGGGAGAGAGCGAGGAGATGGGGAGGGGGAAGATAGTGATAATGTTTATAGACAACTCGACGAGCAGGCAGGTGACGTTCTCGAAGCGGGGGGGGGGGCTTCTGAAGAAGGCGAAGGAGCTATCCATCCTCTGCGATGCGGAGGTCGGCCTTGTCGTCTTCTCCAGCACCGGCAGGCTCTATGAGTTCTCCAGCACCAACATGAAAACTGTGATAGACCGGTATACCAACGCAAAGGAGGAGCTACTTGGCGGGAATGCAACTTCAGAAATTAAGATTTGGCAGAGGGAGGCAGCAAGCTTGAGGCAGCAACTGCACAACTTTGCAAGAAAGCCACAAGCAACTGATGGGTGAGGAGCTTTCTGGCCTACGTGGTAGAGACCTACAAGGTTTAGAGAATAGGCTTGAAAAAAGTCTACGTAATAACAAAAATGAAAAAGGGAAGCCTAAATTCCCCAGGAAAACATCGAACTTTCTAAAAGCCCTAATGGCATGTCCCAACAAAAATTGGAACTGGTTAACAAGCTTTCAGGCCTGGGAAAAAGAAGGGGGCCCCAAAAACCAATGAAAGTTCCCACCCTTCCATACGGCTTTTCGTATCCAAAAAAAAAGGGTAATGAGGCCCCCCAAAGCTGGGAATTGGAGCCAAACCCCACGCAAAAGAGAAAAGGGGGAGGGGGGAGTAAAAAACACCTTGGCCCCCAAAAAGGGGGCGAAAAAATTTTATTTTGCCCTTTAAAAAATTTTGGGGCGGAAAAAAACGGGGAGAAAAAAAAAAGTGGTTAATTATTTTCTAAAAAAAGACCAACCAAAGACGCCTCTTTTTGAAAGAAGATGAGAGTGATATTATTTTTGTGTGGTAGAATGAGGTGGGAAAAAAGAAAAAAAAAAAACAAAAAGAGGAGGAAAACAAAAAACAAAAAAAAAAAAAAAGGAGGGGGAGAAACAAATAGAAAAAATTATTCTGTTTGTGTGTTTCGATGGGGAAAGAAGAAGC



gi|88525864|gb|CI452898.1|CI452898 CI452898 Oryza sativa (japonica cultivar-group) 1 week after flowering ear Oryza sativa Japon

TTGTGGCTTTCTTGCAAGTGT
|||||| ||||||||||. |
AACACCAAAAGAACGTTTCCT

EST sequence (targeted fragment marked with yellow):
CTCCAATGATCCAATCCATTTCATTGTAGAATTTGCATGTCTTTGGCCAAACGATTCAGTGGAGGTCCAGGGTTGTAATTTACAAAAGAACAAACCTACCAGCAAGTAAACATTTAGAGAAAAAGGATTACACATTGGGAGAACCACTTGCTGTTGTAACCCCCCAAAACCTTCAGTTGCTACATCATAAGAAACATAGCTGTGCTACACTGGAACCCGTTTTCCTCTGTAGCGGTCAAGGAACGATGTGACAAATGGTTGTTGAAATATCCAACCAATAATAGGAATCCTTTGCAAGAAAACCACAAGAGTTGGCCAGAATCCACTGAAGAGTACAACAAAGCCATATGCCTCTAAAAGCATGCCGAAGAAGGGCCACCCAATGAGAACCAGGAAAAAGCCAGCACCAAATGAGAT



gi|86883702|gb|CI328730.1|CI328730 CI328730 Oryza sativa (japonica cultivar-group) shoot Oryza sativa Japonica Group cDNA clone

TTGTGGCTTTCTTGCAAGTGT
|||||||||||||||| ||.|
AACACCGAAAGAACGTCCATA

EST sequence (targeted fragment marked with yellow):
CAGGAAACCCTTTTTTTTTAATGTTTTATTTGAATGAAATCTTTGAATGCATATAATGAGTGGAAGAACTGGGCGGCCAATGAGTGGGCAGGCTGATCATCCCAATTTCCTTCAAGCAACTCGTGTCTAACTAGAAAAGAAAAAAAAGAAGAAAATAAAAAGATTATGTACAGAAAAAAGGCCATCATCAGAACATGGACCTCTGGCACAGGCGATAGCAGTTGTTGCTCAAACCCTATTGCAAGCCTGTAAAAGGATGGGTTTTATTCTACAGCTGCATAGTTCGAATACCTGCAAGAAAGCCACAATCCAGACAGCAGCAGTCAAAACACAAGTATTTTAGCTTCCCTACTCGTGCGCTAATTCAAAACTGGGAAGAAGTGGAAGGGTCTGTGTTGCCCTTTGCCCGCAGCGCCGCAATTGCGCGAGGGGAATGCTCGGGAAGGAGC



gi|86507860|gb|CI150493.1|CI150493 CI150493 Oryza sativa (japonica cultivar-group) Panicles mixture of one, two, three weeks aft

TTGTGGCTTTCTTGCAAGTGT
|||||| ||||||||||. |
AACACCAAAAGAACGTTTCCT

EST sequence (targeted fragment marked with yellow):
GGGATAATAGCATCAAATTTACTTCTTCCAAGCTATCAAGTGCGCATAAGTTGCGACAATACGCTCAAGCATAAGCCGACAAGGCTGGAATATCTATATCTGCGACTGCCAGGCACTGTTACAAAACGATAAAGGGTATGTAAAATCTATTTTAGTTTTCAATAGCGGTCCTCTACTGCTACCTTGTCCCAACATGCGGGGCTTGCTTCAGAAGTTTCTCCAATGATCCAATCCATTTCATTGTAGAATTTGCATGTCTTTGGCCAAACGATTCAGTGGAGGTCCAGCGTTGTAATTTACAAAAGAACAAACCTACCAGCAAGTAAACATTTAGAGAAAAAGGATTACACATTGGGAGAACCACTTGCTGTTGTAACCCCCCAAAACCTTCAGTTGCTACATCATAAGAAACATAGCTGTGCTACACTGGAACCCGTTTTCCTCTGTAGCGGTCAAGGAACGATGTGACAAATGGTTGTTGAAATATCCAACCAATAATAGGAATCCTTTGCAAGAAAACCACAAGAGTTGGCCAGAATCCACTGAAGAG



gi|218495118|gb|FG965580.1|FG965580 MA_LYP9_04364 Mature embryo cDNA Library of LYP9 Oryza sativa Indica Group cDNA 5', mRNA seq

TTGTGGCTTTCTTGCAAGTGT
| ||||||||||||||||. |
ACCACCGAAAGAACGTTCGAA

EST sequence (targeted fragment marked with yellow):
ATTCCAAGAATCCCGAAGGAATCGACGCAAGGTGGACCACGGTGGGAGATCCTCTTCTTCTTCCCCAACTCCGGCCGCCGACGCCATTCCTTTCTTTCTCCTTCTCTGAAGCCTGGGGGTACACCGTCGATGACGACCGTAGCAGCCGCGCCGTCGCCGAAGCAGTACACCGTCGCCAAGACTTCGCCGAGCCGCATTTGCTGCTTGGTGAGCCTCCTAGTAGTCCCTAGAGTCCTTACCAAACGCATGCACGATTAGATCGAGCCTCAAAACTCACATGCATGTGCAAGCCGAGCTTAGCCGCCGCTTCTAATACCCTATCAGCCGCTATAGAACACCAAAGCTTGCAAGAAAGCCACCAATAGGTTCGCACAGTTGTTCTCTATACTTTTTATTTTGGGAGCTTGAGCTGAATCGCCGCTGTTCGCCGCTGGTGATACTGTGAAGCTCGCGGCTGTGCTGCTGTTCTGTTCTGTCCAGAGCAAGGGCATGGCTTTTGAAATTTAAAGACTCCCAGGAATGTATTAGCAA



gi|88501795|gb|CI695478.1|CI695478 CI695478 Oryza sativa (japonica cultivar-group) 4.5 leaf-stage leaf Oryza sativa Japonica Gro

TTGTGGCTTTCTTGCAAGTGT
|||||||||||||. |||..
AACACCGAAAGAATTTTCGTC

EST sequence (targeted fragment marked with yellow):
GAGGCATCAGCCAAGCCACACGTCTCGAAGCTTCTTGTAACAGGAGCTAGGGTTAGGTCTCCGAGCCTCCGACCTTCCGATTCCTCTCCGCCGGCAGCCATGTCAGGTCGCGAGGTCCGCGAGTACACGAATCTCAGCGACCCCAAAGATAGGAAGTGGGGGAAGGGGAAGGACAAGATTGATGATGAGGACATCACCTTCCAGCGCATGGTCGCAAAGATGCAGGAGGTTGCTGGTGAACGGGGAGGTTACCTTCATGGGCGAGGAGCATTGGACAGTGATGATTTACTGTACCTAAAAGAACAAATGGAAGCTGAGGAAGACGCAGAGCGTCTTCTTCGCCGTACTGAGAAGCGTGCATTTGCTGCTTTTAAGAAAGCCACAATTTTAGCTGATTCTACACCTGCTGTTCCTGNGGCTCTTCGAGTNG



gi|88970787|gb|CI385412.1|CI385412 CI385412 Oryza sativa (japonica cultivar-group) callus Oryza sativa Japonica Group cDNA clone

TTGTGGCTTTCTTGCAAGTGT
|| ||||||||||||| |||
AAAACCGAAAGAACGTCGACA

EST sequence (targeted fragment marked with yellow):
GGTCACATCAGGAACCCCTTTTTTTTTAATTGTTTTATTTTGAATGACATCTTTGAATGCATATCATGAGTGGAAGAAGTGGGCGGCCAATGACTGGGCAGGGTGATCATCCCAACTTCCTTCAAGCAACTCATGTCTAACTAGAAAAGAAAAAAAAGAAGAAAATAAAAAGATTATGTACAGAAAAAAGGGCATCATCACAACATGGACCTCTGGCACAGGCGATAGCAGTTGTTGCTCAAAGCCTATTGCAAGCCTGTAAAAGGATGGCTTTTATTCTACAGCTGCATAGCTCGAACAGCTGCAAGAAAGCCAAAACCAAACAGCAGGAGCCAAACCACAAGTATTCTTCACCTCCCCTACTCCTGCGCTAACTCAAAACTGGCAAGAAGTGCCAAGCCTCTGGCTTGCCCTTTGCCCCGGAGCGCCGCACTTGCGCGAGCGGAATGCCTCGGG



gi|58665712|gb|CK054398.1|CK054398 57630rsicek_13025.y1 Oryza sativa cv. PA64s panicle ferile cDNA library Oryza sativa Indica G

TTGTGGCTTTCTTGCAAGTGT
|||..|||||||| |||| ||
AACGTCGAAAGAAGGTTCTCA

EST sequence (targeted fragment marked with yellow):
GCACGAGGGTTGATGTCCTACAACCAAAGAAAGAAGTCACATCTGAGTTACCAAGTCTGGACAAGTTCTTGGTCAAGCATCTTTCAAAGCTTGAAAAAGAAGTTCACGAAGCAAGAGAAGCAGGTAGAAAAGCCTCTTCAGTAAATTCTTGTGCACAAGGTGCTCAAAGACAGATTACAGGCAGGAATCCAAAGGCAACAGATTCTGCTTCAGATCTGAGCAGCATTCTTGTGAAGCACGTGTCGAAGCTTGAGAAGGAGATTCTAGAAGCGAAGAAGAATAATAACACACGCATTCAACTCTTGGAAGAAAGCTGCAAGAAAGTAGAAGCGCATGTGGAGAAAGATGCCAGCAAAGAATCTGAATTTTACAATGCTCAGTCAGAATCCTTCTGTAACAGTGGTTCCGTGGGGAGTTGTAATTCCAGGGAATCATATGAAAAAAGCAAGCACGGCCGAGATTGTTCACAAGACAAAGAGAATAAAATTTTATTTTCACATCAATTACCACCGTCTGGTGCAAAAGGTAAACAGGGAGGAAAAAGATTAACTAGGATTGAAGCTGCAAAGCTGGAAGCACTTAATTCTTTCTGTACTAAAGATGGCAATGC



gi|29685906|gb|CB682181.1|CB682181 OSJNEf09D09.f OSJNEf Oryza sativa Japonica Group cDNA clone OSJNEf09D09 5', mRNA sequence

TTGTGGCTTTCTTGCAAGTGT
||||||||||||||||||| |
AACACCGAAAGAACGTTCA-A

EST sequence (targeted fragment marked with yellow):
CACGCCTTCAATTTCCTAATCAATCTCCCATATAATTCCCCTTAGCTTGTATGCCTATCATTAGTACTTCTTGTGTTGTGTTGTCTTCTTGCCTTCTTTGAGCTAGAGCTAGCTAGGTTTGTGACCTGCTGTACGTGCGTGTGTTAATTAGATAGATGTCTTAGATCTGGGAGAGAGCGAGGAGATGGGGAGGGGGAAGATAGTGATAAGGAGGATAGACAACTCGACGAGCAGGCAGGTGACGTTCTCGAAGCGTCGGAACGGGCTTCTGAAGAAGGCGAAGGAGCTATCCATCCTCTGCGATGCGGAGGTCGGCCTTGTCGTCTTCTCCAGCACCGGCAGGCTCTATGAGTTCTCCAGCACCAACATGAAAACTGTGATAGACCGGTATACCAACGCAAAGGAGGAGCTACTTGGCGGGAATGCAACTTCAGAAATTAAGATTTGGCAGAGGGAGGCAGCAAGCTTGAGGCAGCAACTGCACAACTTGCAAGAAAGCCACAAGTAATCATCTAATGATTCTGCAATGGAAATTGATCATACATTAATATAAAATTCATCAAGAAAGTAGTTTATCAACAATTTAAATGCCACATGGAATTGTATAAGAACCACCAAAAGATGCTTAAATACTTGAAGGAAAACTTTAGGAATATAATCAGAATATTCACTGTCAGATTTATCAAGAAAGTAGTTTATCAACAATTTAAATGTCACATGGAATTGTATAAGAACCACCAAAAGATGCTTAAATACTTGAAGGAAAATTTTAGGAATATAATTAGAATATTCACTGTCAGATTTATTTTAATAGTATTCCT



gi|88276430|gb|CI397034.1|CI397034 CI397034 Oryza sativa (japonica cultivar-group) seed Oryza sativa Japonica Group cDNA clone J

TTGTGGCTTTCTTGCAAGTGT
||||||||||||| || ||||
AACACCGAAAGAAGGTCCACA

EST sequence (targeted fragment marked with yellow):
CAATGATCACATCAGGAAACCCTTTTTTTTAATGTTTTATTTGAATGACATCTTTGAATGCATATCATGAGTGGAAGAACTGGGCGGCCAATGACTGGGCAGGCTGATCATCCCAACTTCCTTCAAGCAACTCATGTCTAACTAGAAAAGAAAAAAAGAAGAAAATAAAAAGATTATGTACAGAAAAAAGGCCATCATCACAACATGGACCTCTGGCACAGGCGATAGCAGTTGTTGCTCAAACCCCTATTGGAAGCCTGTAAAAGGATGGCTTTTATTCTACAGCTGGATAGCTCGAACACCTGGAAGAAAGCCACAACCAAACAGCAGCAGCCAAACCAAAAGTATTCTTCACCCTCCCCTACTCCTGGGCTAATTCAAAACTGGCAAGAAGTGCCAACCTGGGAGCCACTGTGGTTG



gi|88831152|gb|CI081962.1|CI081962 CI081962 Oryza sativa (japonica cultivar-group) ABA: Abscic Acid treated callus Oryza sativa

TTGTGGCTTTCTTGCAAGTGT
|||||||||||||||| ||||
AACACCGAAAGAACGTCCACA

EST sequence (targeted fragment marked with yellow):
CAGGAAACCCTTTTTTTTTTAATGTTTTATTTGAATGACATCTTTGAATGCATATCATGAGTGGAAGAACTGGGCGGCCAATGACTGGGCAGGCTGATCATCCCAACTTCCTTCAAGCAACTCATGTCTAACTAGAAAAGAAAAAAAAGAAGAAAATAAAAAGATTATGTACAGAAAAAAGGCCATCATCACAACATGGACCTCTGGCACAGGCGATAGCAGTTGTTGCTCAAACCCTATTGCAAGCCTGTAAAAGGATGGCTTTTGTTCTACAGCTGCATAGCTCGAACACCTGCAAGAAAGCCACAACCAAACAGCAGCAGCCAAACCACAAGTATTCTCCACCTCCCCTACTCCTGCGCTAACTCAAAACTGGCAAGAAGTGCCAAGCCTCTGCCTTGCCCTTTGCCCCGCAGCGCCGCACTTGCGCGAGCGGAATGCCTCGGGAAGGAGCTCCTGGAACTTCTCGAGGAATAGCGCCCATGTCTCCGATCCCATGTCGGCCAGCTTGACGAAGCTCGCACTTGTCGGAAGTTGC



gi|88275270|gb|CI395874.1|CI395874 CI395874 Oryza sativa (japonica cultivar-group) seed Oryza sativa Japonica Group cDNA clone J

TTGTGGCTTTCTTGCAAGTGT
|| ||||||||||||| ||||
AAGACCGAAAGAACGTCCACA

EST sequence (targeted fragment marked with yellow):
GGTCACATCAGGAAACCCTTTTTTTTTAATGTTTTATTTGAATGACATCTTTGAATGCATATCATGAGTGGAAGAACTGGGCGGCCAATGACTGGGCAGGCTGATCATCCCAACTTCCTTCAAGCAACTCATGTCTAACTAGAAAAGAAAAAAAAGAAGAAAATAAAAAGATTATGTACAGAAAAAAGGCCATCATCACAAAATGGACCTCTGGCACAGGCGATAGCAGTTGTTGCTCAAACCCTATTGCAAGCCTGTAAAAGGATGGCTTTTATTCTACAGCTGCATAGCTCGAACACCTGCAAGAAAGCCAGAACCAAACAGCAGCGAGCCAAACCACAAGTATTCTTCACCTCCCCTACTCCTGCGCTAACTCAAAACTGGCAAGAAGTGCCAAGCCTCTGCCTTGCCCTTTGCCCCGCAGCGCCGCACTTGCGCGAGC



gi|29685220|gb|CB681495.1|CB681495 OSJNEf07M22.f OSJNEf Oryza sativa Japonica Group cDNA clone OSJNEf07M22 5', mRNA sequence

TTGTGGCTTTCTTGCAAGTGT
.||| |||||| ||||||| |
GACAACGAAAGCACGTTCAAA

EST sequence (targeted fragment marked with yellow):
CTCCAGCAGCGACGGATCCACCAACGGCCAGCCGAATCGTCGGAGAAGGAGTATCTTCAACCAAGGGAGGAGGAGGATGGGAGGCCGACCAAGGCGAACTGATAGGGAGGATAGTGTGCGGCGAACTGTCTATGTATCTGACATTGATCAGCATGTGACTGAACAGAAGCTTGCTGAAGTTTTCTCAAATTGCGGACAATATTTTGCAGAGTAGATTTAAATTCATTTTGGTTAATACTTTATAACACCAGAGTGACAAAGAGTGATTTTGCATTGTAAGTATGGAGCACAACTTTTCTCTATGGTAAATGACTAAATGCAGTTGGGTGCAACCCTAGAGGTATGATTCACTTGAATGCCACTCTAGAACAAGTACAGCAGTTACTTTCGACAGCTGCTTGTTTTAGATTGTGACCTTGCCCGGCCTGAATGGATTGTGACTTAGCACCTAGACAAGACCAACTTGTCACAATAATTTATTATTGGCAAGAGGTAATAGTTTCTGAAAAAAAGGGAGATCACAAGATGAGAAATGGAAGAAACTTGCACGAAAGCAACAGTGGTAGATTGCCGTATATGTGGTGACCCAAATTCAGTGCTGCGTTTTGCCTTTATCAAGTTTGCCGATGATGTTGGTGCAAGAGCAGCTTTAACACTTGGTGGAACCGCGCTTGGTTATTACCCTGTGAGAGTTCTGCCATCTAAGACCGCGATTTTGCCGGTGAACC



gi|88572620|gb|CI664191.1|CI664191 CI664191 Oryza sativa (japonica cultivar-group) callus 50ppm CuSO4 for 1 week Oryza sativa Ja

TTGTGGCTTTCTTGCAAGTGT
||||.||.|||||||| |||.
AACATCGGAAGAACGT-CACG

EST sequence (targeted fragment marked with yellow):
GTGAAGTTTGTGGTGCATTGCATGCTAGCATACAACCTGCTGGTGTGGCTGTTGCTCTGCAATGTTGGCACATACCTTTGCCAGAAAACTTGAAATGCAAGACTTTGCAAGGTTGGATTAGCACTTCACATTCATCTCGCTCTGGAGTTTTTGAGGGTGAGAGCAGCTCTTTTTGGAATGACTTCTCAGCCCTTCTTAAGCTTAGGGGCATAGACATGGAGAGGGACAGCCATTCTGCCTCCATAGCTTGGTGCCCTTTAAGGTCTCATGATGTCCCAGTCTGCAATGGGCACTGCAAGAAGGCTACAACCAACGGTGCAATTTCACCCAAATCAGTACCAGCTCCCTCTAATATGGTTTCTGCTGTTAGCTCAATGCTCTTATCCCTTGGAGAGGATCCCTTCAGGAA



gi|89181990|gb|CI113496.1|CI113496 CI113496 Oryza sativa (japonica cultivar-group) Panicles two weeks after flowering Oryza sati

TTGTGGCTTTCTTGCAAGTGT
|||||||||||||||| ||||
AACACCGAAAGAACGTCCACA

EST sequence (targeted fragment marked with yellow):
TTGAGAACACAACAAAAAACCCTGCAAGTCGAGCTTTAACAGTAGAGTACTCTGAAGACTGAACAAATGTTCAATGATCACATCAGGAAACCCTTTTTTTTAATGTTTTATTTGAATGACATCTTTGAATGCATATCATGAGTGGAAGAACTGGGCGGCCAATGACTGGGCAGGCTGATCATCCCAACTTCCTTCAAGCAACTCATGTCTAACTAGAAAAGAAAAAAAAGAAGAAAATAAAAAGATTATGTACAGAAAAAAGGCCATCATCACAACATGGACCTCTGGCACAGGCGATAGCAGTTGTTGCTCAAACCCTATTGCAAGCCTGTAAAAGGATGGCTTTTATTCTACAGCTGCATAGCTCGAACACCTGCAAGAAAGCCACAACCAAACAGCAGCAGCCAAACCACAAGTATTCTTCACCTCCCCTACTCCTGCGCTAACTCAAAACTGGCAAGAAGTGCCAAGCCTCTGCCTTGCCCTTTGCCCCGCAGCGCCGCACTTGCGCGAGCGGAATGCCTCGGGAAGGAGCTCCTGGAACTTCTCGAGGAATAGCGCCCATGTCTCCGATCCCATGTCGGGCAGC



gi|88836026|gb|CI371131.1|CI371131 CI371131 Oryza sativa (japonica cultivar-group) callus Oryza sativa Japonica Group cDNA clone

TTGTGGCTTTCTTGCAAGTGT
||||||||||||| || ||||
AACACCGAAAGAAGGTCCACA

EST sequence (targeted fragment marked with yellow):
CAATGATCACATCAGGAAACCCTTTTTTTTTAATGTTTTATTTGAATGACATCTTTGAATGCATATCATGAGTGGAAGAACTGGGCGGGCAATGGCTGGGCAGGCTGATCATCCCAACTTCCTTCAAGCCAACTCATGTCTAACTAGCAAAAGAAAAAAAAGAAGAAAATAAAAAGATTATGTACAGAAAAAAGGCCATAATCAGAACATGGACCTCTGGCACAGGGGATAGGAGTTGTTGCTCAAACCCTATTGCAAGCCCTGTAAAAGGATGGCTTTTATTCTACAGCTGCATAGCTCGAACACCTGGAAGAAAGCCACAACCAAACAGCAGCAGCCAAACCAAAAGTATTCTTCACCTCCCCTACTACTGGGCTAACTCAAAACTGGCAAGAAGTGCCAAGACTCTGGCTTGCCCTTTGCCCCGCAGCGCCGCACTTGCGCGAGCGGAATGGCTCGGGAAGGAGCTCCTGGAACTTCTCGAGGAATAGCGCCCATGTCTCCGATCC



gi|33681190|gb|CF309429.1|CF309429 ABF--03-J22.g1 ABF3-overexpressing transgenic rice plasmid cDNA library (ABF) Oryza sativa Ja

TTGTGGCTTTCTTGCAAGTGT
||||||||||||||||||| |
AACACCGAAAGAACGTTCA-A

EST sequence (targeted fragment marked with yellow):
TTCTCTCTCTCCTCTCCCTCTCTCTCTCTCTCTGTCTCTCTCTCTCGGGGTATTGCAAGATAGTAGCTAATTAACCAGCCTTTGGCCTTCAGTTTCCCCATCGGTTCATCAGAGCACGCCTTCAATTTCCTAATCAATCTCCCATATAATTCTTTTTAGCTTGTATGCCTATCATTAGTACTTCTTGTGTTGTGTTGTCTTCTTGCCTTCTTTGAGCTAGAGCTAGCTAGGTTTGTGACCTGCTGTACGTGCGTGTGTTAATTAGATAGATGTCTTANATCTGGGAGAGAGCGAGGAGATGGGGAGGGGGAAGATAGTGATAAGGAGGATATACAACTCGACGAGCAGGCAGGTGACGTTCTCGAAGCGTCGGAACGGGCTTCTGAAGAAGGCGAAGGAGCTATCCATCCTCTGCGATGCGGAGGTCGGCCTTGTCGTCTTCTCCAGCACCGGCAGGCTCTATGAGTTCTCCAGCACCAACATGAAAACTGTGATAGACCGGTATACCAACGCANAGGAGGAGCTACTTGGCGGGAATGCAACTTCAGAAATTAAGATTTGGCAGAGGGAGGCAGCAAGCTTGAGGCAGCAACTGCACAACTTGCAAGAAAGCCACAAGCAACTGATGGGTGAGGAGCTTTCTGGC