| mature miRNA: TTTCCCTCTCCGTGCGCGCTCG species: Oryza sativa database: miRNEST The numbers on the right side of the alignments show a score calculated for them. When calculating the score, a mismatch is given a score of 1, bulge: 2, and wobble: 0.5. |
| Predicted miRNA targets | |||||||||
gi|58691067|gb|CK079754.1|CK079754 79043rsicen_25031.y1 Oryza sativa cv. LYP9 booting whole plant cDNA library Oryza sativa Indi TTTCCCTCTCCGTGCGCGCTCG EST sequence (targeted fragment marked with yellow): CAGGCACAACATCATCGATACCTACGAGTGCTAACGGAGAAGGAAATAGGCCAACTCAGTCACAATTTGTCTTACCTTTCCAGCCATTGTCACTTTGTTTCAACCATCTAAATTATTATGTGGACATGCCCTCAGAAATGAAGCAACAAGGACTCATGGAAAGTCGTCTCCAACTGCTCTCTGATATTAGTGGTGCTTTTAGGCCAGGTCTTCTAACTGCATTAGTTGGTGTCAGTGGAGCTGGAAAGACCACTTTGATGGATGTCTTAGCAGGAAGGAAAACTAGTGGAACAATTGAAGGAAGCATAACCCTTTCTGGTTACTCCAAGAAACAAGAAACGTTTGCTCGCATTAGCGGCTACTGTGAACAAGCTGATATCCATTCACCAAATGTTACTGTATATGAATCCATTCTCTACTCTGCTTGGTTGCGCCTTCCCTCAGATGTTGATAGCAATACAAGAAAGATGTTTGTGGAGGAGGTCATGGCCCTTGTAGAGCTTGATGTATTGTGCAATGCTATGGTTGGTCTCCCTGGAGTTAGCGGTTTATCGACTGAACAAAGAAAGCGATTAACAATTGCTGTGGAGCTGGTAGCAAATCCTTCAATCATCTTTATGGATGAGCCTACTTCTGGTC | |||||||||
gi|112786135|gb|EE592130.1|EE592130 NEW_RNG15-D04-T7 Rice mixture of leaf, root, panicle Oryza sativa Japonica Group cDNA, mRNA TTTCCCTCTCCGTGCGCGCTCG EST sequence (targeted fragment marked with yellow): CAACGGATCCCTCAACTATTCAAAACCGGTGCAAAGCAGGTCCCTCAGCGGTTTTGACGGTGGTCTTGGCCGATGTGGCATCTACGTGGCCGGTTTGCGTCCTACATGGCGGTGACGTGTCACTGTCAGTGGGTCCCACCATCCTCACTATCCACGAACGATTGGACGACGAGAGACTGGGAGAGGGAGCGACCAGCGCCTCCTCCCTCTCCCTCCTGGCATTGTTCCTCGCCGGCCGGTGAGCGCCCACGGAGAGGGAAAAAGGCGCCGGCCGGCAAGTGGGGCGGAGACGGCAGCTGGCCGCCGCCCACTGCGCACTTCTTCGGCGGTCTGCGACGCGGAGCTAGGGTTGCGGGAGTCGGAGGGCGGCGGCGCCATCATCCTGCTCGAACAATCGGAGAGACGGCAACGACGAACTGTGTTCATGCAACAGTGTGATTACCTGGCCGGGACGAACTCAGTGACGATGCGGCCGCCGCCGGGGACGAGGGTATCGGAGATGTTGACGCCACGCTCAGCGGTGGCGTCCGTGGACTGGTCATGACCGATGACGCCCCATCTCCTCGTTACGACTCGTCGCGGACTCCATGGCGGCGGCCGGGCCGCCCTTGACCGTCTTCCCCAACACGAGGTTCTCCGCCGACTGCATC | |||||||||
gi|88308034|gb|CI647861.1|CI647861 CI647861 Oryza sativa (japonica cultivar-group) library (Kikuchi S) Oryza sativa Japonica Gro TTTCCCTCTCCGTGCGCGCTCG EST sequence (targeted fragment marked with yellow): TGTGTGGGCTGGCCCCCGGCCGGCGGGTGGCCGGGTGGGGAGGAGGTCGGCAGGGCGAGGCGAGAGAGGCGCCCGGCGACGGGCGATGTGGAAAGAGGTGCTCGCGTCGATGCGGTCGTCGTCGCCGCCGGCCAGGTGGGGGGAGGTGGAGGCAGGGAAGGGGAAGAGTGGAGGGAGTGGGAAGGGCGGCGACCGGCGGCGAGAGTGCATGGAGAGGGAGGAGACAAGGAAGCCAGCGGCGAGCGCGCAGGTAGATCCTCTTCATCGCCACTTTGGGCCGCCTCGTCGCCCGCAGGAGGTGGCCAAGTCGATGTCGGCAGTTCTACGTCGCCTCCATGTACTGGTTCATCACCACCCTCTCCACCGTCGGCTACGGCGACATGCACGCCGAGAACACCGGAGAGATGGTCTACACCACCGCCTAC | |||||||||
gi|88299400|gb|CI572352.1|CI572352 CI572352 Oryza sativa (japonica cultivar-group) shoot Oryza sativa Japonica Group cDNA clone TTTCCCTCTCCGTGCGCGCTCG EST sequence (targeted fragment marked with yellow): GGTGTGGGCTGGCCCCCGGCCGGCGGGTGGCCGGGTGGGGAGGAGGTCGGCAGGGCGAGGCGAGAGAGGCGCCCGGCGACGGGCGATGTGGAAAGAGGTGCTCGCGTCGATGCGGTCGTCGTCGCCGCCGGCAAGGTGGGGGGAGGTGGAGGCAGGGAAGGGGAAGAGTGGAGGGAGTGGGAAGGGCGGCGACCGGCGGCGAGAGTGCATGGAGAGGGACGAGACAAGGAAGCCAGCGGCGAGCGCGCAGGTAGATCCTCTTCATCGCCACTTTGGGCCGCCTCGTCGCCCGCAGGAGGTGGCCAAGTCGATGTCGGCAGTTCTACGTCGCCTCCATGTACTGGTTCATCACCACCCTCTCCACCGTCGGCTACGGCGACATGCACGCCGAGAACACCGGAGAGATGGTCTACACCACCGCCTACATGCTCTTCAACCTCAGCC | |||||||||
gi|117246015|gb|CT856539.1|CT856539 CT856539 Oryza sativa (indica cultivar-group) cv. Guang Lu Ai 4 Oryza sativa Indica Group cD TTTCCCTCTCCGTGCGCGCTCG EST sequence (targeted fragment marked with yellow): AACCACGTCTCCGACGACCACCACCACCCACCAAATCACGCATCTCCCCACTCCATTGCCACCGCCTCACGCTTCTACCCCTCTAGAACCTTCCAGAACAATCCAGTATCCCCTCTCCTCGCCTCCTCGAGATCGCGCGGAGAGGGAGGCGGCGTCGTCGCTTGATCTGTCAGGAGGAGGAGGAGGAGGAGGAGGAGGGTAGTGTGAAATCGGGGGATATGGTGGTGGCGGCGGCGGCGAGGCCGCAGACGGCGGAGGCGCTGTCGAAGCGGGCGAGCATGCTGCGGGACTCGCTGCAGAGGAGCCAGGGGAACACGGACGGGATGGTCACCATCCTCGGATCCTTCGACCACCGCCTCTCCGCGCTCGAGGCCGCCGTGGGGGGGGGGGGAGGGAAGACCCCCGCCATCCGGATGGCCCACGAGAACTTCGACAAGACGATCAAGGCCGCGAATGGCATCCTCTCCCAGTTTGACCTTGCGCGGCCGGGCTGAGGAAGCGGAATTGAAGGGGCCCCCAGAGGATTTAAAAGAGCTCCCTGGAAGGCCGGGGATCTGCTCAAAAGGAATTGTTTGGTTTCTTTTCCCCAAAAAAAAAATTTCAAGAGGCATGAAGGGAGTTTTTGAAAACAGGGCCACCACCCTGTTGGGGTAAAGTTTGCCCCCGGAAAATAGAGAAAAGGAATTTTAGGCCGCGTGGAATGAATAACGCAACCAAAACACTTACTGAGCCCCGGACTCAGTCCCCTTTGAAATGTTCCCCCCCAAGTCAGCTCGGGCGCGGCAAAAACAAAAAAAAATGAATTTCCCGGACCCCCCTCGACACTCGCCGGGAAACGGGCGTGGGGCCGCCCTCCTCGGAAAGCCCTTCACTTCCCACAAAGAGACCTGTGGGGAGAAAAGTGGAGGGGAAAAACACGGGCGGAAGAACACCAACAACGATAGAAATGGTTCCTCTCCTCGAACAAAAGAAGGCTGGGCGGCGCCCTCTGGACGAGAAAACTGGGGAAAGAGCGTCCCTGCTCGTTCAAACTCAGAATCTGATTAAAGAGCGGGGGGGGGGAGAAAAAATACACGAGGGCGATGCAATTACCTGTCACTTAAAACAAAATAATACTAAATTACTGCGACGAGAAAAAAATCATCCCCGCGGGGGTGGGGGGCGCGAGTCGCCCGCGCCCCCACCACCTGAAAAAACATGATCTGGGCCCCCCTACCTTGTTTCCGGGAGTACGAAACTCAACAATTGCAAGCGGGCCTAGCGAGCTAAATTGTCGTAGACGTAATAATACCTACGACTCCTTCCTTATCTTCTCTATCTATTCC | |||||||||
gi|87006604|gb|CI294987.1|CI294987 CI294987 Oryza sativa (japonica cultivar-group) etiolated shoot Oryza sativa Japonica Group c TTTCCCTCTCCGTGCGCGCTCG EST sequence (targeted fragment marked with yellow): CTCTCTGTGTGGGCTGGCCCCCGGCCGGCGGGTGGCCGGGTGGGGAGGAGGTCGGCAGGGCGAGGCGAGAGAGGCGCCCGGCGACGGGCGATGTGGAAAGAGGTGCTCGCGTCGATGCGGTCGTCGTCGCCGCCGGCAAGGTGGGGGGAGGTGGAGGCAGGGAACGGGAAGAGTGGAGGGAGTGGGAAGGGCGGCGACCGGCGGCGAGAGTGCGTGGAGAGGGAGGAGACAAGGAAGCCAGCGGCGAGCGCGCAGGTAGATCCTCTTCATCGCCACTTTGGGCCGCCTCGTCGCCCGCAGGAGGTGGCCAAGTCGATGTCGGCAGTTCTACGTCGCCTCCATGTACTGGTTCATCACCACCCTCTCCACCGTCGGCTACGGCGACATGCACGCCGAGAACACCGG | |||||||||
gi|117250437|gb|CT857060.1|CT857060 CT857060 Oryza sativa (indica cultivar-group) cv. Guang Lu Ai 4 Oryza sativa Indica Group cD TTTCCCTCTCCGTGCGCGCTCG EST sequence (targeted fragment marked with yellow): ATCTCCTCATGCCTACCCACTGCTAGGGTTTGCCCCTAAGCCCCCCACCCTCTCCGCCATGGCTCTCCCTCTCCACGACGCCACCACCTCCCCCTCCGACCCCGACGACCTCGGCGGCGGCGGCGAGGAGGAGGAGGAGAGGCTCGCCTCGAAGCCGCTGCTCTCGTCCCCGTCCACCTATCCTTCCGCGGGGACGGAGGAGGGCGTCGAGGAGCTGGAGCTCGACCGGAGGTACGCGCCGTACGCGAGGCGGGACGCGTACGGGGCGATGGGCCGGGGCCCCCTGGGCGCGGCGGGGGCGGGGCGGCTGGCGGTGGGCGCCGCCGTGCTCTTCCCGCTCCGGCTGGCCGCGGGCGTGCTCGTGCTCGTCGCCTACTACCTCGTGTGCCGCGTGTGCACGCTGCGTGTGGAGGAGGAGGAGCGCGAGGGTGGCGGTGGCGGCGCGGCTGGAGAAGTGGAGGGGGACGGGTACGCGCGGCTCGAGGGGTGGAGGCGTGAGGGCGTCGTGCGGTGCGGCCGCGCGCTCGCGCGCGCCATGCTGTTCGTCTTCGGCTTCTACTGGATCCGCGAGTACGACTGCCGCTTCCCTGATGCTGAGGATGAGCATCAGGAACAGTCCAAAGAATTGGGAAGACCAGGGGCAGTAGTATCTAATCATGTATCTTATGTGGATATTCTTTACCACATGTCATCTTCCTTCCCAAGCTTTGTTGCCAAGAGATCAGTGGCCAGATTGCCCATGGGTGGTCTCATAAGCAAATGTCTTGGATGCATTTTTGTTCAACGGGGAATCTAAAACCTCAGATTTCAAAGGCGTTTCAGGTGCTGGGACTGAGAGAATCCAACCGGCTCATCAACAGAGGAATTTTCCAATGATGCTACTTTTCCCTGAAGGACAACTACCAATGGGGATTATTCTCTCCCTTTCAGACAGGGACCTTTTTGGCAAAAGCCCCATTGAACCCAGCCATTTTAAAAAATCTTACCAGAGAATTTATTCCACAAGGGAATTCGTGGTCCGGGGGCCCGGGATGGGATTTTGGCTCCTTTGTAAATTGTTAAAAAACCCTGGAAGGGGGACCCTTTGCCCCGGTGGTTTCCCCCCCCTTCGCACAAAGAAAGGGAAGAAACCCTATACTTTTCCCCCAAAATATTGCGGGGGAAAATGGGGGGGGGGGGGGGGGGGGAAACCGGATTTTTTTTTTTATTTTTTTTGTGCCCTCCAAAAAAAAAAGGGCGGGGGGCCCCCCCACGCGGGCGCCGATCGCGGAAGGGGAGGGAAAAAAATAAAAAAAGTAAACCCATCACCTTCCTTGGGTCCGTCTCCCCT | |||||||||
gi|88239313|gb|CI240475.1|CI240475 CI240475 Oryza sativa (japonica cultivar-group) Shoot and root of germinating seeds Oryza sat TTTCCCTCTCCGTGCGCGCTCG EST sequence (targeted fragment marked with yellow): TTTTTTTTTTTAAAAAATTAAAATCTCTTATATTGTAGGACGGAGAGAGTATTATACTGAGGAGAACACATTACATTTTTTTTAGATTATGAGGAGAACATTGCATAGATAATTAACTAGTAGTAGCTAATTAAGATCCAGCTCCGGTTGGCAGGTCATGTCACGGATGCGGGTTGTGGCGGTTGTTGGCGCTGGCTTGGCCGTAGTCGTTGATGGACTCCATCTCCACCCTCTCCGGCGGCCGGTCACCCTCCTCCTCCGCCGCCGCCACCGCCTCCTGTCCTAGCGGAGTCGCCACCGCCACCTCTCCCTCACTCCAATCGAGATTCGCTGACGAAACCGTGGCGGCGGCGTCGACGCGAGCGAGGAGGGAGAGGGAGAGCAGCAGCGCCGCGAGGAGGAGGAGGAGGAGGAGCACGGCGAGAGAGCCCCGCGCCGCCGCCGCCGCTGCTGCTGCGCCATCACATTCTCCTCCTCTTCCTCAATTTCACTTCTCTTTTTCTCTCTTTCCGGTGACAAGACCGGGGCCTCTGCTTGGCTCCAGTAGGCCAACAGTGCT | |||||||||
gi|86601577|gb|CI253905.1|CI253905 CI253905 Oryza sativa (japonica cultivar-group) Panicles mixture of one, two, three weeks aft TTTCCCTCTCCGTGCGCGCTCG EST sequence (targeted fragment marked with yellow): TTTGTTTCCTCGAAAGCAAGAGAAACAGTGTGCAGTTATATCAATAGGTGAGATTCATGAGTTCACTGAATACGACTACATACAGAATGTCACAGGACGGAAGGCTAGAATTACAATCAGAAGTTCATTTATCCGAATGTGCATCTGATAACCCTCACACATACATACACACACCTCAAAGTTTTAAGAGATGCCCAATCTAGCACCGCAGTAGAGTCTGGGCATCTCTAAAAGGTCTTATGGATAGTATGTATATAGCAAAATTAAAGGATAGTAATTTTGCAACCCATGGAACTCGTTTTCATCAAGATTGTGTAGGACTGGATGTCACGCAGCAAAACCATTTCTTCGAGTTTGTCTTGGGGGCATATGATTCCACCCTCTCAGTCCTAGTTTCTTTGCAGGGTGAATCAGTATCTTGCCCATTCCCACCCTTTTTCTCATCTCTGGCTTTGTTGAATATCACTGTGAATCCATCAGCGGACGCTGGGTCGTTGACATCCCATTCACCAAACTTGGGCAAGGGACGACCTGCTTCCTCCGACATGGATTGCGGCGAGCCCGATCCGGCGAGCACGAATTCCGGGGAAGGTCTCCTCTTCCTCCTCCTCCCAGCGAGTGGGCCGGCGCGCGCGGAGGGGGAAGAGACG | |||||||||
gi|87010300|gb|CI281190.1|CI281190 CI281190 Oryza sativa (japonica cultivar-group) supermix Oryza sativa Japonica Group cDNA clo TTTCCCTCTCCGTGCGCGCTCG EST sequence (targeted fragment marked with yellow): TTTACATCAGAAGTTCATTTATCCGAATGTGCATCTGATAACCCTCACACATACATACACACACCTCAAAGTTTTAAGAGATGCCCAATCTAGCACCGCAGTAGAGTCTGGGCATCTCTAAAAGGTCTTATGGATAGTATGTATATAGCAAAATTAAAGGATAGTAATTTTGCAACCCATGGAACTCGTTTTCATCAAGATTATGTAGGACTGGATGTCACGCAGCAAAACCATTTCTTCGAGTTTGTCTTGGGGGCATATGATTCCACCCTCTCAGTCCTAGTTTCTTTGCAGGGTGAATCAGTATCTTGCCCATTCCCACCCTTTTTCTCATCTCTGGCTTTGTTGAATATCACTGTGAATCCATCAGCGGACGCCGGGTCGTTGACATCCCATTCACCAAACTTGGGCAAGGGACGACCTGCTTCCTCCGACATGGATTGCGGCGAGCCCGATCCGGCGAGCACGAATTCCGGGGAAGGTCTCCTCTTCCTCCTCCTCCCAGCGAGTGGGCGGCGCGCGCGGAGGGGGAAGAGACGGGGATGAGAGG | |||||||||
gi|117213150|gb|CT844633.1|CT844633 CT844633 Oryza sativa (indica cultivar-group) cv. Guang Lu Ai 4 Oryza sativa Indica Group cD TTTCCCTCTCCGTGCGCGCTCG EST sequence (targeted fragment marked with yellow): ATGAAGCTCACCCCCTGTTGTTCCATTCCTCCTCGTCTCCCACACGGGCAAAGAGATTCTCCATTTCTCCCGGCTTCCTCTTCTCCTCCTCCTATACATAGGCGTCGCCGCGTACGCCATTGCCAGCCTCGTCCCAATCCCACCACCTGCGCCACGCGCGCGCGCGTCCTTCGGGCACCCTCGCACCGCACCGTCCGTTGGCGCGCGGTTGGTGGGGCGGTGGTGGTGGTGGTGCCTTGGCTAGTTTGGCCGGCGCGCGCGGGGAGGGAGGGAGGGAAGGAGAGGAGGAAGAGGATGCTCGGGTTCAGGTCGCAGACGCCGTGGTCGGGGGCGGGGGCGGAGCCGATTTGCGGCGACGCGGCGGCGGCCGTGGTGGCGGCGCGGAAGGGGATGGAGACGCCGCTGACGGCGGTGGCGGAGGCGTTCGAGGAGCTGGCCCGGAGGATGGAGGCCGACGGCGGGGAGCTCCGCCTCGGGCCCTTCGGCGACACGTGCGCGCTCGTCTCCGTCCTCTTCAGCTGCCTCGGCATGGCCTTCAGGTTCGCCGAGATCGAGTACGTCGCCAAGGTGAACGACCTCATCGGAGCGGCGAAGTCGTACGGCACGCTGAACGACATC | |||||||||
gi|117216296|gb|CT857843.1|CT857843 CT857843 Oryza sativa (indica cultivar-group) cv. Guang Lu Ai 4 Oryza sativa Indica Group cD TTTCCCTCTCCGTGCGCGCTCG EST sequence (targeted fragment marked with yellow): ACACCAAGCCCATATGATGTAGTTCTAGTAGTTACAGCCAAGAACATGGCAAGAAACTATGGAGATGAAGATGAAGATGATATGCTACAACTCGACGGAGACGTAGGTGGCGGAGTAGTCTGGCATCCGGTGCAGGCTCCGGAGCACGCTCTCGGCGACCTGCTTCGTCGCGGCGTCGCCCTTGTGGAACGCGCTCACCAGCGCGCTCGGCAGCGCGCGGTCCGCCGTCACGTCGCGCACGCACCGCTCGCCGCCGTGCGCCAGGAACCTCTCCACGGCCCAGAAGCAGCGCCGCGACACCGCGCCGGCGGTGTCGCCGCCGACGTCACGGTGCTGCCGCAGCGCGCGCAGGACGTGCCGCGCGGCGTCGTGCTCGGCGAGCACGGCCACGCCGCGTTCCACGTCGACGGCGTCGTCCATGAGCGTGCAGAGCGCGCCCAGCACGGCGTCGACCACGCGGCCGTTCTCGTTGCTCTCGAAGGACGCCGACGAGGGCCTCCACCGCGCCCGCCTCCGCCCAGGCAAAACGTGGTGGCCGGGGGAAGCACACCGCCGCGGTGCACCGGGGCCAAAGGGCCGTCCCCTGGCCCCCGGCGGCCGGGTGGGCGGCTTTCCGGTTTGGTTGTGCGGGGACCCCGCCCCGGGGGGTGCGCCGTCGCCCAAGGGCCCGGAAGGGGAATTTTTCTTTCTTGCTTGGGGGCCCCGCTGGCCTCCTCCTGGGAGGGCGGCGGGCGGAAAAGGTTGCCCCCGACGGGGGGGCGAAAAGGTTTTCTAAAGGCGCGAAACCGGAGCGAGACAGCCCGGTGCGGACACAGTCCGGTTCACCCAGTGTGAGCGCGCGGAGGGGGAAAATCGGGGGGGACCCCCGCGAGGTTACAATGAGGTGTGCGCGGGGGAGGCGGCGGGAAACAAGAGGTGGGGGAGGGTCACCAAAGAGCCATTTTCGCATACGGGTGGACGGGTGGAGAGTGGGGAGTGGGGAAGAAAGGGAGGGGGGAAAGTGGGAGGGGGGGATGTTTGCGGGTGGGGCGCGCGCGTGTCTTGGGCGGCCATGGAGGGGTCGCGTTGGGGCTGTGAGGTGTGTCTGTGTATAGGGTTTCAGGCCGTCGGCGGGATCAGCTGGTCGCGGCTTACGCAGGGGTAGGCGTCTCGCGCCGGGGTGGCGTCTCGAGCCCGCGGCAGACGTCGAGTCGAGGCTGCACGGTGATGTGGTGGAGACGTATGATTGCATGTGAGGGGAGGGCTGGGTGGGATGCGGGCCAGATGTACGGGCGCACCGGGCGCTAGCTGGAAAGAGCGAGGAGATAATGGTAGATTATATCGAGAGTGCGCGTAGTGATCTGGTGG | |||||||||
gi|86829176|gb|CI282884.1|CI282884 CI282884 Oryza sativa (japonica cultivar-group) supermix Oryza sativa Japonica Group cDNA clo TTTCCCTCTCCGTGCGCGCTCG EST sequence (targeted fragment marked with yellow): TTTTTTTTTTTTTTTTTTTTTTTTTAAAAAATTAAAATCTCTTATATTGTAGGACGGAGAGAGTATTATACTGAGGAGAACACATTACATTTTTTTTAGATAATGAGGAGAACATTGCCTAGATTATTAACTAGTAGTAGCTAATTAAGATCCAGCTCCGGTTGGCAGGTCATGTCACGGATGCGGGTTGTGGCGGTTGTTGGCGCTGGCTTGGCCGTAGTCGTTGATGGACTCCATCTCCACCCTCTCCGGCGGCCGGTCACCCTCCTCCTCCGCCGCCGCCACCGCCTCCTGTCCTAGCGGAGTCGCCACCGCCACCTCTCCCTCATTCCAATCGAGATTCGCTGACGAAACCGTGGCGGCGGCGTCGACGCGAGCGAGGAGGGAGAGGGAGAGCAGCAGGGCCGCGAGGAGGAGGAGGAGGAGGAGCACGG | |||||||||
gi|86495889|gb|CI138522.1|CI138522 CI138522 Oryza sativa (japonica cultivar-group) mixed callus (Normalized Library) Oryza sativ TTTCCCTCTCCGTGCGCGCTCG EST sequence (targeted fragment marked with yellow): GAAAGCAAGAGAAACAGTGTGCAGTTATATCAATAGGTGAGATTCATTATATCACTGAATAACGACTACATCACAGAATGTCACAGGACGGAAGGCTAGAATTACAATCAGAAGTTCATTTATCCGAATGTGCATCTGATAACCCTCACACATACATACACACACCTCAAAGTTTTAAGAGATGCCCAATCTAGCACCGCAGTAGAGTCTGGGCATCTCTAAAAGGTCTTATGGATAGTATGTATATAGCAAAATTAAAGGATAGTAATTTTGCAACCCATGGAACTCGTTTTCATCAAGATTGTGTAGGACTGGATGTCACGCAGCAAAACCATTTCTTCGAGTTTGTCTTGGGGGCATATGATTCCACCCTCTCAGTCCTAGTTTCTTTGCAGGGTGAATCAGTATCTTGCCCATTCCCACCCTTTTTCTCATCTCTGGCTTTGTTGAATATCACTGTGAATCCATCAGCGGACGCTGGGTCGTTGACATCCCATTCACCAAACTTGGGCAAGGGACGACCTGCTTCCTCCGACATGGATTGCGGCGAGCCCGATCCGGCGAGCACGAATTCCGGGGAAGGTCTCCTCTTCCTCCTCCTCCCAGCGAGTGGGCGGCGCGCGCGGAGGGGGAAGAGACGGGGATGAGAG | |||||||||
gi|88849054|gb|CI087576.1|CI087576 CI087576 Oryza sativa (japonica cultivar-group) Cd treated callus Oryza sativa Japonica Group TTTCCCTCTCCGTGCGCGCTCG EST sequence (targeted fragment marked with yellow): GTAGGACGGAGAGAGTATTATACTGAGGAGAACACATTACATTTTTTTTAGATATGAGGAGAACATTGCATAGATATTAACTAGTAGTAGCTAATTAAGATCCAGCTCCGGTTGGCAGGTCATGTCACGGATGCGGGTTGTGGCGGTTGTTGGCGCTGGCTTGGCCGTAGTCGTTGATGGACTCCATCTCCACCCTCTCCGGCGGCCGGTCACCCTCCTCCTCCGCCGCCGCCACCGCCTCCTGTCCTAGCGGAGTCGCCACCGCCACCTCTCCCTCATTCCAATCGAGATTCGCTGACGAAACCGTGGCGGCGGCGTCGACGCGAGCGAGGAGGGAGAGGGAGAGCAGCAGCGCCGCGAGGAGGAGGAGGAGCACGGCGAGAGAGCCCCCGCGCCGCCGCCGCCGCTGCTGCTGCGCCATCACATTCTCCTCCTCTTCCTCAATTTCACTTCTCTTTTTCTCTCTTTCCGGTGACAAGACCGGGGCCTCTGCTTGGCTGCTTCTCCTTCCTTTCTGCCGATCTGTG | |||||||||
gi|117216005|gb|CT851545.1|CT851545 CT851545 Oryza sativa (indica cultivar-group) cv. Guang Lu Ai 4 Oryza sativa Indica Group cD TTTCCCTCTCCGTGCGCGCTCG EST sequence (targeted fragment marked with yellow): TCGAGTCCGGGCGAGTGCAGTTCCTCAAGTACAAGACGCAGGGATACTGGACCTGAGGATGAACCATTGGAAGCTCCGATAGACAGAAGATGAAGTTGTATAAACTAGATCCCTAAGAAAGACTTGCTCTAGGAGGAACCAAATTAAGTAATCCAGCATTGCTTAGAGAATAAAGGAAGAGAAGGGGTGTGTATGTATATAGTATTGGGTTATGAGCAAGGTTAAGTCCCCATGCTGTTGTAGATTCTCGTCTACATTCGTCAACTGCAGTATTCATTAACTCTGTGAACTAAATTATGAAGTAACATTGTGATGTAAACTCATGTGTTTGTCCAATTATAAAATGTTATGTTCGATTGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATTTTAAAAAAAAGGGGGGGCCGCAACCCATTCCCCCCTTTAGGGGGAGTTTTTAGGCGCCCCCCGGGGGGCCCTTTTTAAAACCGCGGGGGGGGGAAAACCCCGGGTGACCCCAAATATAATCCCGTGGGAAACCTCCCCCTTTTTTCAATGGGGGAAAAAGAGAAAGAGGGCCCCCACATCCCCCTCTCCCCAAGTGGGCGCCCGCGGAGGGGGAAGGGGGCCCCCCCCCTGGACCCCCCTTTTTACCCGGGGGGGGGGGGGGGTTCCCCCCTTGGGCCCCCCCTCTCTCTGGGCCCCCCAGGGGCCCCTTTTTTTTTTTTTTCTCTTCCCTTTTTTCCCCTATTGGCGGGGGTTTTCCCCGGAAAGGTAAAAAGAGGGGGGCCCCTTTTGGGGGCCCCTTTTTGGGTCTTTACCCCCCCCCCCCCCCAAAAACTTTTTTTGGGGGGGGGGTGGTCCCGGGGGGGGCCCCCCCCCCCCCGAAAACAGCGTTTTCCCCCCCCTTTAGGGAGGGGGACCACCCTTTTTTTTTTAATTGGGGTGTTTTTTTTTGCCCCAAGAGGGAGAAAAACAAAATCAACCCCCCCTCTTTTTTGTGATTATTATTTTTTTTAATTTTAAAAAGAGAAATATTTTTGTGCTAAATTTTTCTCTCCGCCGTTTTTTTGGGGTGAAAAAGAAAAAAAAGGAGGAGGGGTGGTGTTTATTTTATATATAAAAAAAAAAAATATTTTTTTTTTCTCTCGCCCG | |||||||||
gi|66913747|gb|CX100595.1|CX100595 RECm1477 A normalized whole-life-cycle cDNA library of rice Oryza sativa Indica Group cDNA cl TTTCCCTCTCCGTGCGCGCTCG EST sequence (targeted fragment marked with yellow): ATCGTCGGTCGGTCGGAATCCGGGTGACCACGCGTCGCACCTGCGCCACGCGCGCGCGCGTCTTCGGGCACCCTCGCACCGCACCGTCCGTTGGCGCGCGGTTGGTGGGGCGGTGGTGGTGGTGGTGCCTTGGCTAGTTTGGCCGGCGCGCGCGGGGAGGGAGGGAGGGAAGGAGGGAAGGAGAGGAGGAAGAGGATGCTCGGGTTCAGGTCGCAGACGCCGTGGTCGGGGGCGGGGGCGGAGCCGATTTGCGGCGACGCGGCGGCGGCCGTGGTGGCGGCGCGGAAGGGGATGGAGACGCCGCTGACGGCGGTGGCGGAGGCGTTCGAGGAGCTGGCCCGGAGGATGGAGGCCGACGGCGGGGAGCTCCGCCTCGGGCCCTTCGGCGACACGTGCGCGCTCGTCTCCGTCCTCTTCAGCTGCCTCGGCATGGCCTTCAGGTTCGCCGAGATCGAGTACGTCGCCAAGGTGAACGACCTCATCGGAGCGGCGAAGTCGTACGGCACGCTGAACGACATCCTGGACAAAGACGTCGAGAACGACTGCGTCAAGAAGCAGGGCAGCCACTCCCGCAACCTGCGCAGGGTCCGCCTCGGCCTCGGCCTCATCAAGGTTCTCTTCGAGCAGTTCCTCTCCACCCAGGAATGTTCGCTGTATGATGCTGCTACGACAGCTTACGGGCAGGGTTGCGCGCCGTTTAACAGCTGGGCGGTCAAGAAAGCTGTTGGTGCTGGGATGTACACTCTTCCAAGCAGGGAGCAGCTGATCGTGAGGCTCAACGAAACTGATTGCTCCGTGCAGAAGGAGATGAGGAGATACATCGATGCCTCTAGCCCTATCATAGACTACATCGACAACCTTTTCCTCTCGAGGAGCATTAGCCTAGACTGGTGAAACTGAACTGGAGTTCATATTTGCAGCTGCTGACAAAGCTGTCGTTGATGCCATTGTTTTGTTCTTTTCATAGCT | |||||||||
gi|44669387|gb|CR282821.1|CR282821 CR282821 Oryza sativa library (Han B) Oryza sativa cDNA clone y715c09p3, mRNA sequence TTTCCCTCTCCGTGCGCGCTCG EST sequence (targeted fragment marked with yellow): TCCAGTCTCACTCACTGGGCGAGGCGGCCGACTGTTTTTGTTTTTTTTTTTTTTTTTTTTTTGGCCTGTGAACACAAGCCAAATATATCTCATGTGCAAAAGGATGAGCATGGGTACCAGTACAATGCACATTTATCCGGGACGATCACAAAACAAGCCATAGATACCATATAGAAAGCACAGACTTAAAAGAAACAGAATGCAGCTGGGAGGTAACAAGGTGGCAACCATATCCAACATACGGACTGCACCATTTGTTTCACATTACAGGGCATCCATCTCGATTCCTGGATCAACATCCTATCTAAAACTACACAGCTATCCAACAGATGTCTTTTCACTCCAGCAAGTAAATAATCATCGGATCGGCTAAAAATCTGAAACTCAAAGGCCATTGTACAGTGCACAATTGCATTGCATCAGCTTCTCAAGGACTTGTTTTCCTGCAGGCAAATCATCATCTTTCTTCCAGAGTTCAATTCGAGCCTTCATGGCATAGTATTTCTCTTCAACCTCTTCTATTAGACTTTCCAGGTATTCAACTTCATCTTTCTTAGCCTTTGATATCACTTGCTTGCTGTCTTCCCAGTCAGTCTCGTCTGCAGACCGCCCATCCAGCCTTCGTCTTCAACAAACTGACTCACTTTCACAGGCCACACAACTGTATTCTTACAAGGTTTCAATACCCCTAGTGTGGCGAGCGATCGGACTACAGGCAGGCCCTCCACAAATGGCGAGCTCACTCGGAGAGGGAGACGGCGATACATACGATCCTACCACCCTGATGGTCGCGTCTTTAACCTATCCCACTCTGCTTATACAACGTTACATCTATCTAGACGCTCTAGAGGACCGAACGACGCACGCGACACCACGACACTGTCGACAGCAGACCACCGAACAGCAG | |||||||||