| mature miRNA: TTTTAGGACAGAGGGAGTAGG species: Oryza sativa database: miRNEST The numbers on the right side of the alignments show a score calculated for them. When calculating the score, a mismatch is given a score of 1, bulge: 2, and wobble: 0.5. |
| Predicted miRNA targets | |||||||||
gi|88354433|gb|CI624823.1|CI624823 CI624823 Oryza sativa (japonica cultivar-group) seed Oryza sativa Japonica Group cDNA clone J TTTTAGGACAGAGGGAGTAGG EST sequence (targeted fragment marked with yellow): GGTATGGACATATTTTCTTTGGAACAACTCCATTCTTGACCATTCGAGTACAATTTAGATTCAGAAAACCTCCTTGAACATTGACCTATCATCTTTCGTCCCTCAACTATTAAAACCAATGGAAACACGTCCTCCCCTTAAACCACATTGGTTTTTTGTGGTGTGGGACCTGTGTCAAAGCATGTGCGTAACCCATACTTAGGTATTGTCTTGACCATATCAGTATGTCAGCACCCCTCCTAAAAATCTTAGTTTTTCTTTTAGTTTCACTCCATCCCTTATCACTCATCCTAGTCATTAGGATTATCAGATTTCCATTAACACTATAGTGTTGACTAGAATTTCCACATTAAGAAAATAAAAATAAATTGCTTAGTGCTACTCGCTTACTCCATCTGTCCTAAAATATAGTAAC | |||||||||
gi|86505912|gb|CI148545.1|CI148545 CI148545 Oryza sativa (japonica cultivar-group) mixed shoot (Normalized Library) Oryza sativa TTTTAGGACAGAGGGAGTAGG EST sequence (targeted fragment marked with yellow): TTTGCGAGGTATTTACAATGTCATTCCAAAGTTCCAAATTGCCAACAAGCAATTGGTATCTCACAAACAACATCAGATTGGCTGATTGCCATTCTTCAGCCATTACAATATCTCCCCCNTCACTAATGAATCATCAAAAGTAAAAACAGCTTCTTTTTTCCCTCTCTTTTCTTGGCAACATTTGCATTTTCGCAATTGCCTCTCTTTTTTTCCCATCTTCTCTAAACTATGTTACAATAGACTATATTTATCTACTAATTCATACTCTCTCTGTCCAAAAAAAAAAAAGAGTCAAATTCCAGCGATGAATCTGGACACACATATATCCAGGTCCATTGCTAGGATTTGGTTTTTTATGGGACGGAGGTTGTAGGTATTTGCAGCACATCAAGATCAACAAAAACTGCAAAAACACGGACAATATCGAGCTCGCCGGAGCGAGAGCTTCTTTGTGTCCTCAGCTCGCCGGCGGCGTGGCGGTGGAGGCCCTGCGCGCCTTTCTGGCGGCCGCGGCGGCTGCGGCGGAGGCGGCGGCGGCCGTGCCGAGGGTGTGGTCGTGGAGGAAGAGGCAGACGGCGGAGCAGTCGTCCACCCTGGACGTCGGGAACTTGGCCCGCCACCGCTGCACGGCGGCCTCCACCACCGCCTTCGACGCGTGCTGCTTCCGCGGCGTCGCGCACACGATGGACACCACCTCCTCGTTGCTCAGCA | |||||||||
gi|86499299|gb|CI141932.1|CI141932 CI141932 Oryza sativa (japonica cultivar-group) mixed shoot (Normalized Library) Oryza sativa TTTTAGGACAGAGGGAGTAGG EST sequence (targeted fragment marked with yellow): TTGCGAGGTATTTACAATGTCATTCCAAAGTTCCAAATTGCCAACAAGCAATTGGTATCTCACAAACAACATCAGATTGGCTGATTGCCATTCTTCAGCCATTACAATATCTCCCCCTCACTATGATCATCAAAAGTAAAAACAGCTTCTTTTTTCCCTCTCTTTTCTTGGCAACATTTGCATTTTCGCAATTGCCTCTCTTTTTTTCCCATCTTCTCTAAACTATGTTACAATAGACTATTATTTTATCTACTAATTCATACTCTCTCTGTCCAAAAAAAAAAAAGAGTCAAATTCCAGCGATGAATCTGGACACACATATATCCAGGTCCATTGCTAGGATTTGGTTTTTTATGGGACGGAGGTTGTAGGTATTTGCAGCACATCAAGATCAACAAAAACTGCAAAAACACGGACAATATCGAGCTCGCCGGAGCGAGAGCTTCTTTGTGTCCTCAGCTCGCCGGCGGCGTGGCGGTGGAGGCCCTGCGCGCCTTTCTGGCGGCCGCGGCGGCTGCGGCGGAGGCGGCGGCGGCCGTGCCGAGGGTGTGGTCGTGGAGGAAGAGGCAGACGGCGGAGCAGTCGTCCACCCTGGACGTCGGGAACTTGGCCCGCCACCGCTGCACGGCGGCCTCCACCACCGNCTTCGACGCGTGCTGCTTCCGCGGCGTCGCGCACACGATGGACAC | |||||||||
gi|86835111|gb|CI346588.1|CI346588 CI346588 Oryza sativa (japonica cultivar-group) flower Oryza sativa Japonica Group cDNA clone TTTTAGGACAGAGGGAGTAGG EST sequence (targeted fragment marked with yellow): ACAATGTCATTCCAAAGTTCCAAATTGCCAACAAGCAATTGGTATCTCACAAACAACATCAGATTGGCTGATTGCCATTCTTCAGCCATTACAATATCTCCCCCTCACTATGATCATCAAAAGTAAAAACAGCTTCTTTTTTCCCTCTCTTTTCTTGGCAACATTTGCATTTTCGCAATTGGCTCTCTTTTTTTCCCATCTTCTCTAAACTATGTTACAATAGACTATATTTATCTACTAATTCATACTCTCTCTGTCCAAAAAAAAAAAAGAGTCAAATCCCAGCGATGAATCTGGACACACATATATCCAGGTCCATTGCTAGGATTTGGTTTTTTATGGGACGGAGGTTGTAGGTATTTGGAGCACATCAAGATCAACAAAACCTGCAAAAAGCACGGACAATATCGAGCTCGCCGGAGCGAGAGCTTTTTTGTGTCTCAGGTGCCCGGGGGCGTGGCGGTGGAGGCCCTGCGCCCCT | |||||||||
gi|117230947|gb|CT854147.1|CT854147 CT854147 Oryza sativa (indica cultivar-group) cv. Guang Lu Ai 4 Oryza sativa Indica Group cD TTTTAGGACAGAGGGAGTAGG EST sequence (targeted fragment marked with yellow): ATTAAACTAATAGTATAGATTAGTTGCAGAGTTTATGGGGATTCTTTGATTAATTGTTCAAAAGTTCAGTGCAAATCTGAGTAATTAGCTTAGCTAGCTTGGATTTGTTGGTTGGTTATGACTGGTTCTTGAATTGGCGGGAGTAGCTTTCAGTATGGTTCGCAGCTGTTGCTGCAGCAGTTAACATTTACTACTTCTACTCCAGTACTCACCGTATTTAAGCTAGCTGAACTGGCAACCTAATCAGTGGCTGACCAACTTGGCAGACATTGCCAGCAAGCTGCGACTACTGTCAAAACTACTTCCTCTGTCCCAAAATAAATCAAAATAAATCAATCTAGAACGGGTAATATATCATAATACTATGAATCTTTGGTTTATTTTGGGGCCGAGAGAGTATAACTACTAGCACTAGCGTAACCGTTGATTTGAGAAACCATCACAAGATTCATGGCACCTACTAGAAGGATTAGCGGACACTTGCTGTCCGGATCAGGTAGCTAGTGTGAGGGTGGGTTAGGCATTATCCTGCAGTGAAACACCTCAGTTCAGTACGCACAGGGCTGGGCATGGAGGTTTTTCACGCGGTGGGCGTGTATTGTGCCGTGAGGCGGTGGGACTGTTCTTGATTCTTAGCGGTACAGGTTCACACAAAGCTAGTGATGCGGTTTTGAGGGTAAACCGTTTCCTCTTTTTTCCTTTTGCCTTTGGGAATGGGCAGGTGGTTTATCCAAATTTCTGGGAAATGACCTGGTTTTTTATGGAAACCTGAAAAGTGAAAATAACAAACCAATCCTATGAAATGAGAAACGGTAAAAATGAAGATCCCACCCGGGGCTAAAACATGGTAAAAAAAAATTGGGGGCTTGGGAAAAATAAAAAAAAAGAAAACAATTTTTTCCCCCCCCTGGCGAAAAGGGGCCTTACCACGGCTTGGGGAAAAAACCCTTTTCTTTTGGCCTCCCCCCTCTTCCCCCCAAAAATCCCCCTGAAATCCTCCAAAAGGGGGGAGGGGGGATTTAAGAAAAAAAAAGGGGGGCCCCCCTCCTAAAAACCCTCGCCCCACACACAGGGGTCTCCCCCTCCCACAGAAAAAATAACACACAATATAATTTTTTTGGTGGGGTCTCCCCCCCTGTGTGGCGCTTTTTTCTCCCCTCCTCTCTCCGTCTAAAAAAATATAATAATTATTATATTAGTGAGACACACCCCCCCCTTATTTTGTGGGGAAGAAAAAAACAAAAAAC | |||||||||
gi|88724439|gb|CI747698.1|CI747698 CI747698 Oryza sativa (japonica cultivar-group) library (Kikuchi S) Oryza sativa Japonica Gro TTTTAGGACAGAGGGAGTAGG EST sequence (targeted fragment marked with yellow): AAAAATAATGTAATTATCATTTACTCCCTCTGTCCTAAAAATATAACAACTTTTAACATTTAGAATTTGTCTCAAAATATAATAACTTATATACCAGCATTTTCTTCTCAACCAATTACAATCCTCTACCATTTAATTTTCTCACATACCTTCACTTCTCATCTAATCGTAGCCTAATCCTATTTAGTTATATCTATTTTCTTAATAGTTGTGTTCAACTCTAAGAATATATGCTTATATTATAGGAGAGAGAGAATATTGTAATGTAACTTGATTTATTACCAAATGTTTTATAAATATAACTTAAATATTTTTCTATTTGAAAAAAAAATAAAGGTGAATGATTAAATGATTGTTAAAAAGTTAACG | |||||||||
gi|29617140|gb|CB622152.1|CB622152 OSIIEa08I14.r OSIIEa Oryza sativa Indica Group cDNA clone OSIIEa08I14 3', mRNA sequence TTTTAGGACAGAGGGAGTAGG EST sequence (targeted fragment marked with yellow): ACAGGAATAAATGCTGGCAGCTTATCAAAACAGAAGTCCCCGGTTAGGCCAGACATGTCCACTTCAAAAGATGCTTTGTTCTCTAGTTCGACAATGTTGGGTCGGTCAAGCGGATCCTTAAGGCGACCTGTTGTTTCTAGTAGCCGAGAACTGCAAAGCAGCGAAGCTGAACCATCACGTAGCCGCACACCAGATGCAAGTCCTGGGACATTCCAAAGAAGTGCTCCTCCACGTAGGAGCTCACAGATGCTCGACTATTCTGACCCCAGGCATTCGTCATCTGGCAGGCATGCAGCTAACAAGAACTATGAGTCCACTATAAGAGGCATCCAAGGCCTAAATTTTGATGCCAACGATAGGATCCACTACTAATATTGTTGGGATCTTATGCGTAATCGTTTGATCTCTTGGGTATAAAAGGGGAAGTGAGGAGATATTTTCGACTTGCTCCCCCTGTCCTGAGATGGATGAGAATGCTGGAGTGTTATGGCAGCCTGCTGACCCGAAGTACTGGAGGCTGGCTGGCTAAATAAAGGGTCGGCCTGGTACTCCAGCGGCTATGACCTTAAACAACGTTTTAAGCCCCCTGTACATGCTCTTGTTTGCTCCTATTGTGCTCTTAGATGCTGTGTGTTAGTCTTTTTTTAGATGTCATATCCTGTATCAAGGTTGTCAAGATATTTGCCCTCTGGGTCACGCGTCGTGTGTGCATTTCGATGCAATTGCTGTCTGAGAAAGTGTGGAAATTGTACCTTTAAAGAAGTGATTATTTATT | |||||||||
gi|88283591|gb|CI405037.1|CI405037 CI405037 Oryza sativa (japonica cultivar-group) 11 days after transferring callus Oryza sativ TTTTAGGACAGAGGGAGTAGG EST sequence (targeted fragment marked with yellow): GTTAACGTGACCTTTTGACTTAGTCAACTTTGTGATGATGGAGCAACCCAGTCACAAATACAGGTAAAGCCCACATTTAAGTGCCTAGGAAAAAATATAAAAAATGTGGGGCCTACTTGCTAGCCACTTTCTCTGAACTCTACTCCTTCTGTCCTATAAAAAAATAATCTACTACCGGATGTGATACATTCTAGTACTACGAATCTAGACATACATATGTTTGAATTAACCCGTACAACCACTGCACTTAATTCCAAATAGCACCTGCATATAAACAAACATGACAAGCTTGTTTGATCCATTAAGTGATATCCAAACAACCTATAAGCAGCAACCCGTACAATGCGTGTTCCATATCCAAACTGATTGATTTGTACCCTGGAAAGGTTGCAAGCCAGAAAACGGTCACTTCATTCTTGAG | |||||||||
gi|86877023|gb|CI311384.1|CI311384 CI311384 Oryza sativa (japonica cultivar-group) NAA treated callus Oryza sativa Japonica Grou TTTTAGGACAGAGGGAGTAGG EST sequence (targeted fragment marked with yellow): AAACATAGAGCCATTGAGTGTGCCCACTGCGCAGTCTACACACTGCACAGCAACACACATGGCCTCCATCAAACTCTCCCTCGCATGTGTCCTCCTAATCTCAGGCCTCGTGATGCTGGAGAGGATCGAGCACACTGAAGCGGTCTGCACACTGTTCTGCGCTAAAGGGACGTACATCACCTGCAGCAACCATCCATACGAGCAGCTCTACGGGTGCGCCTGCAGATGCGCGCCGCCGGATGGCGTCGACTGCGTCGTCCATCTCGCCGACGGCTCCACGCAGCAGTGCTGATCGGAAAACGCAGGGAAAGGATGGTGTCGTCGTCGCTCTTCCACTTGCACGTTCTTGTGTGTGTCACTGTATGTGAATTACTTCATCTGTCCTAAAATATAAAGACTTTTAATTGGATGCGATATATTTCAGTACTACGAA | |||||||||
gi|163919930|gb|EG711500.1|EG711500 Os5MPREST3011 Rice young panicles Oryza sativa Japonica Group cDNA clone 5MPR-N2F08SA, mRNA TTTTAGGACAGAGGGAGTAGG EST sequence (targeted fragment marked with yellow): CGTGACGATCCAGCCATCAGGTGGAAAGGACGCGGCTGTGGTCCTCTCCACGACCAAGACCAAGAAGCAGAATGCCCCAGCTAAGCTCTACCACAAGTCTGTGATGCGCAAGGAGTTCCGCAAGATGGCTAAGGCTGTCAAGAACCAGGTTAGTGACAACTACTACAGGCCAGATCTGACCAAACCGGCTCTTGCAAGGCTTAGCTCAGTGTACCGCAGCCTCCAGGTTGCCAAGTCTGGTGTGAAGAAGAAGAACAGGCAGCCAGCCAAGCTGTAAATCGCTTGAAGCTGCGCGTTTTTGTCATGGCACCTCTTGATGCTCATGTTTCCAGCTACCTCTGTTCTAAAAGTGTCCAGACTTGAAATGAGGGATCTCTGTTAGAATTGGATCAACCTTGTCACAGATCTGCCGTGTAGTTTGTATTCTAGACAGTTTATCTGCTCGGTGTCCTTACAAATTGTTTGCTTTGCACTTATTATAGTAGCTAATGTCATCAAATTGTGGGCCCCTGTTGCTACTATGTGGATTTACAATCTGCACGTTAGTAGTAGCAAATCTAGCTATCTCCTTGATCTCCTGGACAAGTTGATAGAAAGC | |||||||||
gi|86833769|gb|CI337343.1|CI337343 CI337343 Oryza sativa (japonica cultivar-group) shoot Oryza sativa Japonica Group cDNA clone TTTTAGGACAGAGGGAGTAGG EST sequence (targeted fragment marked with yellow): ACAATTTTTTATGCGAGGTATTTACAATGTCATTCCAAAGTTCCAAATTGCCAACAAGCAATTGGTATCTCACAAACAACATCAGATTGGCTGATTGCCATTCTTCAGCCATTACAATATCTCCCCCTCACTATGATCATCAAAAGTAAAAACAGCTTCTTTTTTCCCTCTCTTTTCTTGGCAACATTTGCATTTTCGCAATTGCCTCTCTTTTTTTCCCATCTTCTCTAAACTATGTTACAATAGACTATATTTATCTACTAATTCATACTCTCTCTGTCCAAAAAAAAAAAGAGTCAAATTCCAGGGATGAATCTGGACACACATATATCCAGGTCCATTGCTAGGATTTGGTTTTTTATGGGACGGAGGTTGTAGGTATTTGCAGCACATCAAGATCAACAAAAACTGCAAAAACACGGACAATATCGAGCTCGCCGGAGCGAGAGCTT | |||||||||
gi|88985537|gb|CI003017.1|CI003017 CI003017 Oryza sativa (japonica cultivar-group) etiolated shoot Oryza sativa Japonica Group c TTTTAGGACAGAGGGAGTAGG EST sequence (targeted fragment marked with yellow): TTATTTAACAATTTTATGCGAGGTATTTACAATGTCATTCCAAAGTTCCAAATTGCCAACAAGCAATGGTATCTCACAAACAACATCAGATTGGCTGATTGCCATTCTTCAGCCATTACAATATCTCCCCCTCACTATGATCATCAAAAGTAAAAACAGCTTCTTTTTTCCCTCTCTTTTCTTGGCAACATTTGCATTTTCGCAATTGCCTCTCTTTTTTTCCCATCTTCTCTAAACTATGTTACAATAGACTATATTTATCTACTAATTCATACTCTCTCTGTCCAAAAAAAAAAAAAAGAGT | |||||||||
gi|87036145|gb|CI189592.1|CI189592 CI189592 Oryza sativa (japonica cultivar-group) root of seedlings Oryza sativa Japonica Group TTTTAGGACAGAGGGAGTAGG EST sequence (targeted fragment marked with yellow): TTTTTACTACCCGATCAAAGTTCAGAGGCTTTTTATACAGGCATTCTCCGAAGCACATGAAAGAATACATACATACCCATTTGCATCTCTTCTTGAATCCTGATCAACTTAATTAATTATACACAATATAGCTTAGCTACATGTAGTTAAGCTAGATCGAAATATACTCCATCTGTCTTAAAATATAGCAACTTAAAATTAAATGACATATACGTTCTAGCTAGTTTCACAAATCTGAACAGATATGATATATTTCATACATCCGATTTTAAAATTGCTATATTTTAAAACGAAGGGAGAAATCTACGCCCGGTGGCCGATCCCTGGGCTGGGTACCGACCCCTGCGGCATCCAGCCGCTGCTGTCCGGGCGGATGATCTCGGTCGCCGGCGGCGACGGTGGCAATGGCGGCGCTACACCTTGCAGCAAATCATGAGGTGAAGTAGCTTCCTTAGAAGAAGCACTAGTCTCCTTGCCATTCACAGCATGATCACCTGGCATCATCATCATCCTAGCTCGTGCAAGGCAAGAAGATGACGATGCCAACAAGAGGAGAGCAGTGAAGAAGATCACCATTGCCGCCATGTGTGGAGCTGGAGCCATATTGCAAATTGCAATGCAAATGTGGGATTAATTATATATAGGGCGGTGTGCAGTTTGTGAGTTTGTATGCG | |||||||||
gi|88536568|gb|CI466333.1|CI466333 CI466333 Oryza sativa (japonica cultivar-group) whole body 1mM ACC(1-aminocyclopropane-1-carb TTTTAGGACAGAGGGAGTAGG EST sequence (targeted fragment marked with yellow): CAACTGATAATGTGACATTGTGGAGCCTGTACAGGTACATGTGAAAAGCATCCAAACAAAAAAAGAATAGTATAAAGGACAACTGGGCATAATTGCCTAATCATCCAAGAAAAGAGAAAGATAAACAGGGAAGTAGGTTTTTTACATCTCCAACCACTGTTGTTTTACTAAGATACAGAAAAGAAGTTGTTATTCGTAGGGCCAAAACCTATGGCATGACACACTGCCATGACGGTTCACGAAGTTCATCCAATAATTTGAACCACCAATTTTTTTATTTTGAATCTACTATTCCCCCTGTCCCAAAATATAGCAACTTAGTAATCGATTAGACATGTTGCTATATTTTAGGACGGGGTGACGGGGGGAGTATATAAGAAGAACAGCATGTTTGATACATCAAGGCCCTTGTTTTTTTCTTATATCTGTAGATGAAATATCCATGCC | |||||||||
gi|89192046|gb|CI393403.1|CI393403 CI393403 Oryza sativa (japonica cultivar-group) seed Oryza sativa Japonica Group cDNA clone J TTTTAGGACAGAGGGAGTAGG EST sequence (targeted fragment marked with yellow): GCGAGGTATTTACAATGTCATTCCAAAGTTCCAAATTGCCAACAAGCAATTGGTATCTCACAAACAACATCAGATTGGGTGATTGCCATTCTTCAGCCATTACAATATCTCCCCCTCACTATGATCATCAAAAGTAAAAACAGCTTCTTTTTTCCCTCTCTTTTCTTGGCAACATTTGGATTTTCGCAATTGCCTCTCTTTTTTTCCCATCTTCTCTAAACCTATGTTACAATAGACCTATATTTATCTACTAATTCATACTCTCTCTGTCCAAAAAAAAAAAGAGTCAAATCCAGGGATGAATCTGGACAAAAATATATCCAGGTCATTGCTAGGATGGGTTTTTATGGGAGGGAGGTGTAGGTATTTGGAGCAATCACGA | |||||||||
gi|88201090|gb|CI201445.1|CI201445 CI201445 Oryza sativa (japonica cultivar-group) Panicles mixture of one, two, three weeks aft TTTTAGGACAGAGGGAGTAGG EST sequence (targeted fragment marked with yellow): TTTTTTTTTTTTTATGCAGAGGTATTTACAACTGTCATTCCAAAGTTCCAAATTGCCAACAAGCAATTGGTATCTCACAAACAACATCAGATTGGCTGATTGCCATTCTTCAGCCATTACAATATCTCCCCCTCACTATGATCATCAAAAGTAAAAACAGCTTCTTTTTTCCCTCTCTTTTCTTGGCAACATTTGCATTTTCGCAATTGCCTCTCTTTTTTTCCCATCTTCTCTAAACTATGTTACTATAGACTATATTTATCTACTAATTCATACTCTCTCTGTCCAAAAAAAAAAAGAGTCAAATTCCAGCGATGAATCTGGACACACATATATCCAGGTCCATTGCTAGGATTTGGTTTTTTATGGGACGGAGGTTGTAGGTATTTGCAGCACATCAAGATCAACAAAAACTGCAAAAACACGGACAATATCGAGCTCGCCGGAGCGAGAGCTTCTTTGTGTCCTCAGCTCGCCGGCGGCGTGGCGGTGGAGGCCCTGCGCGCCTTTCTGGCGGCCGCGGCGGCTGCGGCGGAGGCGGCGGCGGACGTGCCGAGGGTGTGGTCGTGGAGGA | |||||||||
gi|86861718|gb|CI329509.1|CI329509 CI329509 Oryza sativa (japonica cultivar-group) shoot Oryza sativa Japonica Group cDNA clone TTTTAGGACAGAGGGAGTAGG EST sequence (targeted fragment marked with yellow): GCGAGGTATTTACAATGTCATTCCAAAGTTCCAAATTGCCAACAAGCAATTGGTATCTCACAAACAAAATAAGATTGGCTGATTGCCATTCTTCAGCCATTACAATATCTCCCCCTCACTATGATCATCAAAAGTAAAAACAGCTTCTTTTTTCCCTCTCTTTTCTTGGCAACATTTGCATTTTCGCAATTGCCTCTCTTTTTTTCCCATCTTCTCTAAACTATGTTACAATAGACTATATTTATCTACTAATTCATACTCTCTCTGTCCAAAAAAAAAAGAGTCAAATTCCAGCGATGAATCTGGACACACATATATCCAGGTCCATTGCTAGGATTTGGTTTTTTATGGGACGGAGGTTGTAGGTATTTGCAGCACATCAAGATCAACAAAAACTGCAAAAACCCGGACAATATAGAGCTCGCCGGAGCGAGAGCTTCTTTGTGTACTCAGCTCGCCGGC | |||||||||
gi|29661407|gb|CB657682.1|CB657682 OSJNEc13D09.r OSJNEc Oryza sativa Japonica Group cDNA clone OSJNEc13D09 3', mRNA sequence TTTTAGGACAGAGGGAGTAGG EST sequence (targeted fragment marked with yellow): GCAAGTACAACATGAAGAAGTTCTGCCTGGAGCCGACGTCCTTCACCGTTAAGGCGGAGGGCGTGGCCAAGAACGCGCCACCCGAGTTCCAGAAGACCAAGCTCATGACCCGCCTGACCTACACCCTCGACGAGATCGAGGGCCCGCTCGAGGTCAGCTCCGACGGAACCATCAAGTTCGAGGAGAAGGACGGAATCGACTACGCCGCCGTCACCGTGCAGCTGCCGGGAGGCGAGCGCGTGCCGTTCCTCTTCACCATCAAGAATCTGGTCGCCACCGGCAAGCCGGAGAGCTTCGGCGGGCCCTTCCTCGTGCCCAGCTACCGTGGTTCGTCCTTCCTCGACCCAAAGGGCCGCGGTGGCTCTACCGGCTACGACAACGCTGTGGCGCTCCCCCCCGGAGGCAGAGGAGACGAGGAGGAGCTCGCTAAGGAGAACGTCAAGAACGCCTCGTCGTCGACGGGCAACATCACGTTGAGCGTCACCAAGAGCAAGCCAGAGACCGGCGAGGTGATTGGCGTCTTCGAGAGCGTGCAGCCGTCGGACACAGACCTCGGCGCCAAGGTGCCCAAGGATGTCAAGATCCAAGGGGTGTGGTACGCGCAGCTCGAGTAGGGAATGAACAAATGTTTTGTGCGTGGCCGGGTTGATATATCGATCCATGGAGAGAGGGAAGGAAGGCTGCAATGTGTGTATCTAGTAATGCAAACTCGATCGGGCTGTTGATGGTTTTAATTTTTAGCTTTTGTTTCTTCCTCTGTTCTAAAAAAAAAAAAAAAAAAGAAAAAAAAACTCGAGGGGGGGCCCGGTACCCAGCTTTTGTC | |||||||||
gi|88829952|gb|CI004990.1|CI004990 CI004990 Oryza sativa (japonica cultivar-group) etiolated shoot Oryza sativa Japonica Group c TTTTAGGACAGAGGGAGTAGG EST sequence (targeted fragment marked with yellow): TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGGCGAGGTATTTACAATGTCATCCCAAAGTTCCAAATGGCCAACAAGCAATGGGTATCTCACAAACAACATCAGATTGGCTGATGGCCATTCTTCAGCCATTACAATATCTCCCCCTCACTATGATCATCAAAAGTAAAAACAGCTTCTTTTTCCCCTCTCTTTTCTTGGCAACATTTGCTTTTTCGCAATGGCCTCTCTTTTTTCCCCATCTTCTCTAAACTATGTTACAATAGACTATATTTATCTACTAATTCATACTCTCTCTGTCCAAAAAAAAAAAGATGTCAAATCCCAGCGATGATTCTGGACACACTTTTTTCCAGGTCCATGGCTAGGATTGGGTTTTTTATGGGACGGAGGTTGTAGGTTATGGCAGCACATCAAGATCAACAAAAACTGCAAAAACACGGACAATATCGAGCTCGCCGGAGCGAGAGCTTCTTGGTGTCCTCAGCTCGCCGGCGGCGTG | |||||||||
gi|117232529|gb|CT860985.1|CT860985 CT860985 Oryza sativa (indica cultivar-group) cv. Guang Lu Ai 4 Oryza sativa Indica Group cD TTTTAGGACAGAGGGAGTAGG EST sequence (targeted fragment marked with yellow): GTGTCGCCTCGCCTCGCCTCGCATGGCCACTCGAAGCTTTCCCCGTCCCGGTCCCTAGCAGAGAAGAGCTTCCGCTCCCGCATGCGGCATCTGCCTCTGCCCCCAGCAGCAGCAGCAGCAGCCGCCGCGCCGCGCGAAGCATCTCCTCCTCCTCCTCCTCCTCCCGCCGCGCGAGCGCTGAGCCCTACTGCTGTCGCCTTTGCCCAGATCCCGTCGGTGGCCATGGCGGCGAGGGCGCAGGCGTGGCTGTTCGCGGCCGCGCTGGTCATCTTCCACGGCTCCGAGTACGTCCTCGCCGCGGCCTTCCACGGCCGCCGCAACGTCACCGCCACATCACTTCTTATCAGCAAGCAGTATGTTTTGGCAATGAGTTTTGCAATGTTGGAACACCTGACAGAAGCTCTTCTCTTCCCTGAATTGAAGGAGTATTGGTTTGTCAGTTATGTTGGTTTAGTAATGGTGATTATTGGTGAAGTTATTCGTAAACTTGCTGTGGTGACAGCTGGGCGTTCCTTTACGCATGTTATAAGAATTCACTATGAAGACCAACATAAGCTGATTACTCATGGGGTGTATAGGCTTATGCGTCATCCTGGGTATTCTGGCTTTCTTATATGGGCAGTAGGAACCCAGGTTATGTTGTGTAATCCATTATCCACAGTTGCATTCACATTGGTGCTGTGGCGATTCTTTTCAAAACGGATACCGTATGAAGAATTTTTCTTAAGGCAGTTCTTTGGTCGTGAATACGAAGAATACGCACAGAAAGTGCACTCAGGATTACCTTTTATAGAATGAAAGTTTCAAACTTACAAAGTGTGCTTAACTCCCGCTGGGATCATCATTGATGTGCCCGAGTACAGGAATAAACAACTTGCCATGAGGAAGATAACAAACTAGCCCTTTGGGTTGGAATACATACAAGACAAGTCTTATTTTTTGTAATCGGGTTTAAACGGGTGAAATAATTTCTCCGCCCATCAATGGGGCAAAGGGGAAATGGTGTGGCTGGTCCATTTGTGTTGAGAAAAAAAAAAAATAAAACCCCCCCTCAACAAAAAATTTGTTAAACCTGGCCATTCTTCCTTTTTAAAAGAGAGGGGCCCGGGGTGGGGGTTTTGTGTTTCGCGTGGTTTTTTGGGGCGAGATTTTTCTTAACCAAGAGGGTGAAAATTCCCGGGGAGAAACCTTCCTTTTTTCCTCTGTCCTAGAACCCATTGGG | |||||||||
gi|58694966|gb|CK083653.1|CK083653 84486rsicen_23054.y1 Oryza sativa cv. LYP9 booting whole plant cDNA library Oryza sativa Indi TTTTAGGACAGAGGGAGTAGG EST sequence (targeted fragment marked with yellow): TAGTGGATCCCCGGGCTGCAGGCCTACTCCTTCTGTCCTAGGAGTAGGAAGGTCGCTACGATCCTTATAGGAAGGAGAAATTTTATCATCGTCAAATTTAAAGGCATTCACACTGAGTGAACTCAAAAATGCAACAAAGAACTTTAAGCCCGACAGTCTCCTTGTGGGAAGGAGGATTTGGCTATGTCTATAAAGGTTGGATCGATGAGCAAACTCTTGCTCCTGCAAGGCCAGGGAGTGGTATGGTTGTGGCCGTCAAAAAGTTAAAACCAGAAGGTTTTCAGGGTCACAAGGAGTGGCTGACAGAGGTTGACTACCTTGGCCAACTTCAACATGAGAATCTTGTTAAACTCATTGGTTATTGTTCAGATGGTGATAAACGACTTCTGGTGTAT | |||||||||
gi|88473274|gb|CI410545.1|CI410545 CI410545 Oryza sativa (japonica cultivar-group) 14 days after transferring callus Oryza sativ TTTTAGGACAGAGGGAGTAGG EST sequence (targeted fragment marked with yellow): CTTTATCCAAGTATTTACAATTTTTTATGCGAGGTATTTACAATGTCATTCCAAAGTTCCAAATTGCCAACAAGCAATTGGTATCTCACAAACAACATCAGATTGGCTGATTGCCATTCTTCAGCCATTACAATATCTCCCCCTCACTATGATCATCAAAAGTAAAAACAGCTTCTTTTTTCCCTCTCTTTTCTTGGCAACATTTGCATTTTCGCAATTGCCTCTCTTTTTTTCCCATCTTCTCTAAACTATGTTACAATAGACTATATTTATCTACTAATTCATACTCTCTCTGTCCAAAAAAAAAGAGTCAAATTCCAGCGATGAATCTGGANANACATATATCCAGGTCCATTGCTAGGATTTGGTTTTTTATGGGACGGAGGTTGTAGGTATTTGCAGCACATCAAGATCAANAAAAACTGCAAAAACACGGACAATATCGAGCTCGCCGGAGCGAGAGCT | |||||||||
gi|89176338|gb|CI043359.1|CI043359 CI043359 Oryza sativa (japonica cultivar-group) callus Oryza sativa Japonica Group cDNA clone TTTTAGGACAGAGGGAGTAGG EST sequence (targeted fragment marked with yellow): TTGGATGCGGCAACGCACAAGTTCCTGATTATCAACCCACTAAAAGCACAATTTTACAAGCATCATATATGTGACATACTCCCTCTGTCCCAAAATAAACCCGATGTGACACATACTAGTACTTGTGTCCAAGATGTATTAGGATGTGGCACATCCGTACAATGTTGGTTTATTTTGGAACAGAGTGAGTATATGTTAAGCAAGACTAATGCGGGCTTCCCTCTCGCTCATCTGTATCCGTTAGCTCCCACCTTGCTTGGGACTTTCTGAACATGCAGCCAAAAGGCCACGTTCGATGCACTGAAGAAGATAGCTGTGAAGCCAATCTAGTGTCTGAGGGAATGAGTTCGCTGAAATGTCAACAACGGTCAACCCCTGCGACTCAAAAGAACAAAGATAGTCCTGAATAAGCTTAAGGTTGTTTATAAGCTTTCGATGATCCTGAGGAAGACAATTATCCCTGGAAGCCCTGGTGGCTGTCCATTCCTCTAGCAATGCCTTGTGATCAAAATCAGACATCCTCAACACAATTGGGACT | |||||||||
gi|88511912|gb|CI439418.1|CI439418 CI439418 Oryza sativa (japonica cultivar-group) germinating seeds Oryza sativa Japonica Group TTTTAGGACAGAGGGAGTAGG EST sequence (targeted fragment marked with yellow): GTAAACATAAAATTCTTTATTTTCCTTGTTGCAGAACTTGGAAAACATTGATAAATGAAGACTAATAGATAGCCATTGAAGAAAAAGTGCCAATCATTGCAGAAAGCAAATGCTGGAGCTATACATGTCCTAAAAGCACATTCTTTGCGCCTCCACCAATGCGCCGCCCACCAGCCGAAACCAGTGTTGCCACCTGCCTACGTCGCCGCACCACTCCTTCACCTGGTACTGATGCACAAGCCTCGCCTCCGCTGTCCTAGCAGCTACGGGATGTCAGTAGCTCAGGTGGCATGGCAAGGGGAAGAGGCAGTGAGGGTTTCGGGTGGGAGGGGAAAGGATAATAATTTACATAATTACTCACTCTGTCCTATAATATAAGGGATTTTGGTGGACATATCCTAGTATTAAGAATCTGA | |||||||||
gi|29619623|gb|CB624635.1|CB624635 OSIIEa13E13.r OSIIEa Oryza sativa Indica Group cDNA clone OSIIEa13E13 3', mRNA sequence TTTTAGGACAGAGGGAGTAGG EST sequence (targeted fragment marked with yellow): CGTGGCGGCGGTGGCGGCGGTGGGCGCCGGCGGCTACGCCTACCACGAGCACCGCGAGCAGAAGCAGGCCAGCTACGGCGCCAAGGAGCAGCAGTACGGCTACGCCAGGATGCCGCAGCAGCAGGGCTACTACTGCAACTGATTAATTATTAATCACCCCCCAAATTATTAATAATCCATGCGTACGTACGTACCACTAAATAAATACTGGCTACTACGTACGTATATATACGGTACAATAAGATGAGCAAGGATGTACGTACGTACACGTATATACGTTGCTCACCCACAATTTCGCCGCCGCGGCCGCGCGCCTTATTCCAAACCAGTGTATGTGTGTACGTACATCTATATATGTACTGTGATTTCTGTAAACGTGTGGCCATCGGATCGATGAATTCTATCGTGATGATAGAAACTGCTTCCTCTGTCCTAAAATACAAGAATTTAGTACTCCCTCCATCCTTAAATATTTGACGCCGTTGACTTTTTTAAACATGTTTAACCGTTCGTTTGGTTCAAAAACTGTTGTGAAATATGTAAAACTATATAGACATAAAAGTATAGTTAACAATAAATCAAATGATAGGAAAAGAATTAATAATTACTTAAATTTTTTGAATAAGACAAACGGTCAAATTTTTTTAAAAAAAGTCAACGGCGTCAAACATTTTGAGATGGAGGGAGTATTAGATATGATGTTTCTCTAGTACAATACTAGAAAATCGGTGCGCCTTTGGCGCACAAACTAAAAAAATATCCCATGAATACTTGTACTTTTTAGGGGATATATAAATGTTGTATAGTTATTTAGAATTAAAAAAAGGAAAAAAAAACTCGAGGGGGGGCCCGGTACCCAGCTTTGTC | |||||||||
gi|33380813|gb|CF196156.1|CF196156 Azvi1.2_F04 AZ-VI Oryza sativa Japonica Group cDNA clone AZ-VI1.2F04 5', mRNA sequence TTTTAGGACAGAGGGAGTAGG EST sequence (targeted fragment marked with yellow): TCATTATAAAAAATACCCTATTAAAATTTATCATTACAAAGGATGAAATTGGGTGATATAATGATTATTTTGCAAAGTTTAAACCATATCATTATGTAGTACGCAGTACATCTAGGATGTCTTTGTTCAAGTATTTTTCATATAGACTAAAATGCCCCTGCCATTCTTTTCATATGAACCGTATTTTCGTATATATGGCACTGATCGATTTTTTTTTCATCAATTAATTATAAGTCTCTGTTCACATCAACATCATCATTAAGAAAAGACNNNTGCATACAGTAGCTCCGCATCACTTCGTTATGAATCGACGTACGTTGCACGTTTATATTACTACTCTTATCAGATATAATTAAGAGCACTGTTTTATTCAGGTGAATCAAATCGTATTATTCACCCGACATGCATCCTACATATTTACTTCCGCTGTCCTAAAATAACATCGTGTTTACCCTCCTCCAGTTTATTCCAAATTAAATTTACTTTTNNNAATCATTGTANNNNNNNTNNNNNAAGTGAATAGTAAATACANNGAAACTNGNTAAATAAGAAANNNNNATANT | |||||||||
gi|33810633|gb|CF331203.1|CF331203 NACL--07-D18.b1 Rice callus plasmid cDNA library (NACL) Oryza sativa Japonica Group cDNA clon TTTTAGGACAGAGGGAGTAGG EST sequence (targeted fragment marked with yellow): AAGGCCGCAGCCACCACCACGCCACCGGAGCACAGCGACGCGCCGCCGCGGCTTCATCGTCTCCGCTACAGCGAAATGGCGACGGTTCCGGAGCCTTTGTTCTGGGAGATTGTGAAGAAGAACAACTGCTTCCTCGTGAAGCAGTTTGGAAACAGCAATGCCAAGGTGCAGTTCACCAAGGAGCCCAACAACCTGTACAATGTTCACTCCTACAAGCACTCTGGCTTGGCGAACAAGAAGACCGTGACGATCCAGCCATCAGGTGGAAAGGACGCGGCTGTGGTCCTCTCCACGACCCAGACCAAGAAGCAGAATGCCCCAGCTAAGCTCTACCACAAGTCTGTGATGCGCAAGGAGTTCCGCAAGATGGCTAAGGCTGTCAAGAACCAGGTTAGTGACAACTACTACAGGCCAGATCTGACCAAACCGGCTCTTGCAAGGCTTAGCTCAGTGTACCGCGGCCTCCAGGTTGCCAAGTCTGGTGTGAAGAAGAAGAACAGGCAGCCAGCCAAGCTGTAAATCGCTTGAACTGCGCNGTTTTGTCATGGCACCTCTTGATGCTCATGTTTCCAGCTACCTCTGTTCTAAAAGTGTCCAGACTTGAAATG | |||||||||
gi|58692256|gb|CK080943.1|CK080943 84188rsicen_21646.y1 Oryza sativa cv. LYP9 booting whole plant cDNA library Oryza sativa Indi TTTTAGGACAGAGGGAGTAGG EST sequence (targeted fragment marked with yellow): GGATCCCCGGGCTGCAGGCCTACTCCTTCTGTCCTAGGAGTAGGAAGGTCGCTACGATCCTTATAGGAAGGAGAAATTTTATCATCGTCAAATTTAAAGGCATTCACACTGAGTGAACTCAAAAATGCAACAAAGAACTT | |||||||||
gi|88525620|gb|CI452635.1|CI452635 CI452635 Oryza sativa (japonica cultivar-group) library (Kikuchi S) Oryza sativa Japonica Gro TTTTAGGACAGAGGGAGTAGG EST sequence (targeted fragment marked with yellow): CTTATACCAATAAAAAAATTTCATATGTTTATTTTTATTAACTGGGTTAATATAAGTTTACATTACACGAATATGCATAACATCTGTAAAAAAAGTGTATAAAGTAAAGGCGTATACACTATGTATAAAACTTTATATACACGCAATATGTCCTAACCTAGACCTCCTTTTCCCTCTTTCCTAAACTTTGTTTTTAACTTACTTGGTTTAAAACTATATGGAAGAGCCGGAGAGGGTTAACTATTTTGTATATCTCTCAATTACACCATACCCGTGAGCATAAGGGTAATCTAGGGACGGACGGGGCACCACAGACCATATGGCCATGNACGAAAG | |||||||||
gi|29625197|gb|CB630208.1|CB630208 OSIIEb07A15.r OSIIEb Oryza sativa Indica Group cDNA clone OSIIEb07A15 3', mRNA sequence TTTTAGGACAGAGGGAGTAGG EST sequence (targeted fragment marked with yellow): ACTGGTGTAAATCACTTTATCTTATTCTTACATTCTAATGGTGTTCAGTTGATTGTTTCTTTTGAATGTCGGGCAAGCCACTACACTGCCTGAGCCAGAGATAAAAGCATATGATGTGCTCCGGTACATTCATGCTGTAAAGGACACATTCCCAGACCAGCCCTAGAAGCTTGATGAGTCATCATAATTTTGCTTCATTTCAAGAGCAAGAGGTGGAATTACTCACGTATGTCGGGTACAAAATACATGAACATCCATGTAAAGATCATTTTCAGTGGGTAACAAGCCCAAGTGCCCAACTAGTATATGGAAAAATAAATTATCCAAATCTATGGATCATATGCACGATCAAGACTTCTGAAACGCCCTTGGAGAGCAGCTGTCCAATTGAAGATATTAATCGATTGAAACTGGAAGGTTATAGATGTGCAAAACATCGGGTTCTACTTCCTCTGTCCCAAAAAAAGTGAATCTAGAACGGGATGTGACATGTCCTAATACAACGAATCTAAACAATCCCATCCAGTATTAGGTTGTTTTTTTTTTGAGACGGAGGGAATCCATTAGTGGTTTAGAGTGTGTTTGAGTTCCAAGAATGTGTATATACCCAAAATAATGTGTTTTCCCCTATGAGAATGTCTGATAAATAGTGTGCTTCCCCCTGAGTGTGTCTCAGTTGCAAGAATATGTACGCAAAATAATGTGTTCTCCACTAAATCACTAACGTGTGTCTGAGTTGCAAGAATATGTCCGCAAAAAAAAAAAAAAAAGAAAAAAACTCGAGGGGGGGCCCGGTACCCAGCTTTGTCCC | |||||||||
gi|33795640|gb|CF323690.1|CF323690 HDN--04-I06.g1 OsHDAC1-overexpressing transgenic rice lambda phage cDNA library II (HDN) Oryz TTTTAGGACAGAGGGAGTAGG EST sequence (targeted fragment marked with yellow): GCACAGGGAAGAACAACTGCTTCCTCGTGAAGCAGTTTGGAAACAGCAATGCCAAGGTGCAGTTCACCAAGGAGCCCAACAACCTGTACAATGTTCACTCCTACAAGCACTCTGGCTTGGCGAACAAGAAGACCGTGACGATCCAGCCATCAGGTGGAAAGGACGCGGCTGTGGTCCTCTCCACGACCAAGACCAAGAAGCAGAATGCCCCAGCTAAGCTCTACCACAAGTCTGTGATGCGCAAGGAGTTCCGCAAGATGGCTAAGGCTGTCAAGAACCAGGTTAGTGACAACTACTACAGGCCAGATCTGACCAAACCGGCTCTTGCAAGGCTTAGCTCAGTGTACCGCAGCCTCCAGGTTGCCAAGTCTGGTGTGAAGAAGAAGAACAGGCAGCCAGCCAAGCTGTAAATCGCTTGAAGCTGCGCGTTTTTGTCATGGCACCTCTTGATGCTCATGTTTCCAGCTACCTCTGTTCTAAAAGTGTCCAGACTTGAAATG | |||||||||
gi|33658593|gb|CF281206.1|CF281206 14ETL--08-C18.g1 Rice etiolated leaf plasmid cDNA library (14ETL) Oryza sativa Japonica Group TTTTAGGACAGAGGGAGTAGG EST sequence (targeted fragment marked with yellow): TTTTTTTTCTTTTTTTGGATGGTTTTGTAAACGTCACCTTTTGACTTAGTCAACTTTGTGATGATGGAGCAACCCAGTCACAAATACAGGTAAAGCCCACATTTAAGTGCCTAGGAAAAAATATAAAAAATGTGGGGCCTACTTGCTAGCCACTTTCTCTGATTTTTTCTCCTTCTGTCCTATAAAAAAATAATCTACTACCAGATGTTTTTTATTCTAGTACTACGAATCTAGACATACATATGTTTGAATTAACCCGTACAACCACTGCACTTAATTCCAAATAGCACCTGCATATAAACAAACATGACAAGCTTGTTTGATCCATTAAGTGATATCCAAACAACCTATAAGCAGCAACCCGTACAATGCGTGTTCCATATCCAAACTGATTGATTTGTACCCCGGAAAGGTTGCAAGCCAGACAACGGTCACTTCATTCTTGAGCTTCATATACCGAAAGCTGAAATGTTCATGTTCGTTGGGAACATCTATATATTGGCTAGTACTAAAATAGGCAACAGACTTGTGCATGCACTTGGTTGAGTGGTCAACTGAAGGTGTAACGTTAAATCTTGGTCAGAACCACCAGTGGTCCAAATCCTCTTCTCAAGGCCTAGAAGTATTGCAGTCATCATGGCTCAATGTAGCGTCCT | |||||||||
gi|29686358|gb|CB682633.1|CB682633 OSJNEf10C22.r OSJNEf Oryza sativa Japonica Group cDNA clone OSJNEf10C22 3', mRNA sequence TTTTAGGACAGAGGGAGTAGG EST sequence (targeted fragment marked with yellow): GGGTAACGCCAGGGTTTTCCCAGTCACGACGTTGTAAAACGACGGCCAGTGAGCGCGCGTAATACGACTCACTATAGGGCGAATTGGAGCTCCCCCGCGGTGGCGGCCGCTCTAGAACTAGTGGATCCCCCGGGCTGCAGGAATTCGGCACGAGGGTTCACTCCTACAAGCACTCTGGCTTGGCGAACAAGAAGCCCGTGACGATCCAGCCATCAGGTGGAAAGGACGCGGCTGTGGTCTTCTCCCCGCCCAAGACCAAGAAGCAGAATGCCCCAGCTAAGCTTTCCCCCAAGTTTGTGATGCGCAAGGAGTTCCGCAAGATGGTTAAGGCTGTCAAGACCCAGGTTAGTGACAATTACTACAGGCCAGATTTGACCAAACCGGTTCTTGCAAGGCTTAGTTCAGTGTACCGCACCCTCCAGGTTGCCAAGTTTGGTGTGAAGAAGAAGAACAGGCAGCCAGCCAAGCTGTAAATCGCTTGAAGCTGCGCGTTTTTGTCATGGCACCTCTTGATGCTCATGTTTCCAGCTCCCTCTGTTTTAAAAGTGTCCAGCCTTGAAATGAGGGATTTCTGTTAGAATTGGATCACCCTTGTCACAGATCTGCCGTGTAGTTTGTATTCTAGCCAGTTTATTTGCTGGGTGTCCTTACAAATTGTTTGCTTTGCACTTATTATAGAGGGTAATGTCATC | |||||||||
gi|38476914|gb|CF961047.1|CF961047 9266rsiced_13906.y1 Oryza sativa cv. LYP9 trefoil whole plant cDNA library Oryza sativa Indic TTTTAGGACAGAGGGAGTAGG EST sequence (targeted fragment marked with yellow): CAGGCATTCGTCATCTGGCAGGCATGCAGCTAACAAGAACTATGAGTCCACTATAAGAGGCATCCAAGGGCTGAATTTTGATGCCAACGATAGGATCCACTACTAATATTGTTGGGATCTTATGCGTAATCGTTTGATCTCTTGGGTATAAAAGGGGAAGTGAGGAGATATTTTCGACTTGCTCCCCCTGTCCTGAGATGGATGAGAATGCTGGAGTGTGATGGCAGCCTGCTGACCCGAAGTACTGGAGGCTGGCTGGCTAAATAAAGGGTCGGCCTGGTACTCCAGCGGCTATGACCTTAAACAACGTTTTAAGCCCCCTGTACATGCTCTTGTTTGCTCCTATTGTGCTCTTAGATGCTGTGTGTTAGTCTTTTTTTAGATGTCATATCCTGTATCAAGGTTGTCAAGATATTTGCCCTCTGGGTCACGCGTCGTGTGTGCATTTCGATGCAATTGCTGTCTGAGAAAGTGTGGAAATTGTAAGTAACTTACAGTGATTATTTAT | |||||||||
gi|86889689|gb|CI299887.1|CI299887 CI299887 Oryza sativa (japonica cultivar-group) etiolated shoot Oryza sativa Japonica Group c TTTTAGGACAGAGGGAGTAGG EST sequence (targeted fragment marked with yellow): CAATGTTCACTCCTACAAGCACTCTGGCTTGGCGAACAAGAAGACCGTGACGATCCAGCCATCAGGTGGAAAGGACGCGGCTGTGGTCCTCTCCACGACCAAGACCAAGAAGCAGAATGCCCCAGCTAAGCTCTACCACAAGTCTGTGATGCGCAAGGAGTTCCGCAAGATGGCTAAGGCTGTCAAGAACCAGGTTAGTGACAACTACTACAGGCCAGATCTGACCAAACCGGCTCTTGCAAGGCTTAGCTCAGTGTACCGCAGCCTCCAGGTTGCCAAGTCTGGTGTGAAGAAGAAGAACAGGCAGCCAGCCAAGCTGTAAATCGCTTGAAGCTGCGCGTTTTTGTCATGGCACCTCTTGATGCTCATGTTTCCAGCTACCTCTGTTCTAAAAGTGTCCAGACTTGAAATGAGGGAT | |||||||||
gi|89164905|gb|CI101993.1|CI101993 CI101993 Oryza sativa (japonica cultivar-group) Panicles one day after flowering Oryza sativa TTTTAGGACAGAGGGAGTAGG EST sequence (targeted fragment marked with yellow): TTTTTTTTTAAAAGTAAAAACAGCTTCTTTTTTCCCTCTCTTTTCTTGGCAACATTTGCATTTTCGCAATTGCCTCTCTTTTTTTCCCATCTTCTCTAAACTATGTTACAATAGACTATATTTATCTACTAATTCATACTCTCTCTGTCCAAAAAAAAAAAGAGTCAAATTCCAGCGATGAATCTGGACACACATATTTCCAGGTCCATTGCTAGGATTTGGTTTTTTATGGGACGGAGGTTGTAGGTATTTGCAGCACATCAAGATCAACAAAAACTGCAAAAACACGGACAATATCGAGCTCGCCGGAGCGAGAGCTTCTTTGTGTCCTCAGCTCGCCGGCGGCGTGGCGGTGGAGGCCCTGCGCGCCTTTCTGGCGGCCGCGGCGGCTGCGGCGGAGGCGGCGGCGGCCGTGCCGAGGGTGTGGTCGTGGAGGAAGAGGCAGACGGCGGAGCAGTCGTCCACCCTGGACGTCGGGAACTTGGCCCG | |||||||||
gi|88282434|gb|CI403830.1|CI403830 CI403830 Oryza sativa (japonica cultivar-group) germinating seeds Oryza sativa Japonica Group TTTTAGGACAGAGGGAGTAGG EST sequence (targeted fragment marked with yellow): GTAAACATAAAATTCTTTATTTTCCTTGTTGCAGAACTTGGAAAACATTGATAAATGAAGACTAATAGATAGCCATTGAAGAAAAAGTGCCAATCATTGCAGAAAGCAAATGCTGGAGCTATACATGTCCTAAAAGCACATTCTTTGCGCCTCCACCAATGCGCCGCCCACCAGCCGAAACCAGTGTTGCCACCTGCCTACGTCGCCGCACCACTCCTTCACCTGGTACTGATGCACAAGCCTCGCCTCCGCTGTCCTAGCAGCTACGGGATGTCAGTAGCTCAGGTGGCATGGCAAGGGGAAGAGGCAGTGAGGGTTTCGGGTGGGAGGGGAAAGGATAATAATTTACATAATTACTCACTCTGTCCTATAATATAAGGGATTTTCGTGGACATATCC | |||||||||
gi|86823680|gb|CI258739.1|CI258739 CI258739 Oryza sativa (japonica cultivar-group) same as Lib 23(supermix) Oryza sativa Japonic TTTTAGGACAGAGGGAGTAGG EST sequence (targeted fragment marked with yellow): CCTTTTTTTTTTTTTTTTTTCTTTTTTTTTTTTTTAAACTATGTTTACAATAGACTATATTTATCTACTAATTCATACTCTCTCTGTCCAAAAAAAAAAGAGTCAAATTCCAGCGATGAATCTGGACACACATATTTCCAGGTCCATTGCTAGGATTTGGTTTTTTATGGGACGGAGGTTGTAGGTATTTGCAGCACATCAAGATCAACAAAAACTGCAAAAACACGGACAATATCGAGCTCGCCGGAGCGAGAGCTTCTTTGTGTCCTCAGCTCGCCGGCGGCGTGGCGGTGGAGGCCCTGCGCGCCTTTCTGGCGGCCGCGGCGGCTGCGGCGGAGGCGGCGGCGGCCGTGCCGAGGGTGTGGTCGTGGAGGAAGAGGCAGACGGCGGAGCAGTCGTCCACCCTGGACGTCGGGAACTTGGCCCGCCACCGCTGCACGGGGGCCTCCACCACCGCCTTCGACGCGTGCTGCTTCCGAGGCGTCGCGCACACGATGGACACCAACTCCTCGTTGCTCAGCACGTCCCAAACCCCGTCCGTGGCGAGCACCATGAACAGGTCGGCGCCCGTCACGCGCCGAGACGTCACCTCCGGCGCCGGGATCACGCCGTGCCGC | |||||||||
gi|29613156|gb|CB618169.1|CB618169 OSIIEa01O03.f OSIIEa Oryza sativa Indica Group cDNA clone OSIIEa01O03 5', mRNA sequence TTTTAGGACAGAGGGAGTAGG EST sequence (targeted fragment marked with yellow): GTCTCGAGTTTTTTTTTCTTTTTTTTTGGACGGTGGGAGTAGTTAGCTAGCGAAGGCTCTCCTCTCCGTAGAAACAGAGGAGCTAGCGAGAGTCCAGGTGATGTGGCATGCGTTGTATTCCACGTAAATATAAGTACGTAAGGAGGTCGCTTGGACCAATCAGGACCCATTTCACCCATTTTTGAAGGCTCAATCGCTACAAGGATCCCGATCCAATCCACGTTAATTTTCAGGATTTGGCTTTCCAAATGTCATTTAAGAGCTCAAGATAAAAATGATCCGTTCAAAACAAGCCCTAATTTAGTTAGTGGTCGGGACAGATGGTGCTCTGTCTAGTGTTTTCTTAATTTTGGGTTTTACTATGTTTGTTTTTTAAGTTGTACAAATAAAAAACTTGGTAGTCATCATAGTTCGTTCCGCAAAATGAATTAGAAGTAATAATAAAAAGTGTTATCCACCTATCATCATGTGCTCCTAGCTCGCAATTATTAGTACTCTCTCTGTCCAAAAATAACTTGATCTAAGATGGGAAGCAGCCTATCCTAATACAGTTTTATTGTCTTTCCATTTAGATTGTGTTATTTCGAGACAGATGGAGTAGATTAAAAGAAAAGCAGTTTGCCAAATACTTTTGTTTGAAAACAGTGACGTATGCTAACTCACTGCTATGCTAAATAGAGCCTAATTAAATATATACTTCACCTCTGTTCTTGAATATATTTATCATTTTGACAGTAGCATATAGAACAGGGCAACAATTTA | |||||||||
gi|87007459|gb|CI279130.1|CI279130 CI279130 Oryza sativa (japonica cultivar-group) mixed shoot (Normalized Library) Oryza sativa TTTTAGGACAGAGGGAGTAGG EST sequence (targeted fragment marked with yellow): CACAAAGCCATGTTGTTCTATAGCAAAATTTAGCAAAAACAAAAAAGGGAAAAGGCTACCACCTACTCCCTCTGTCCTAAAATAAACCAAACTCGTACGGGATTTAACACATCCTCTTATAATGAATCTGGACACAATGGTGGCTCGATTCATCGCACTAGGATATGTCACATCCGGTATGAGGTTGGTTTATTTTGGGATAGAGGAAGTACAAGTAGGGAAAAAAACAAAAATACTACAAATCGGTAACACCATTCTACGGAATAGCTGACGTCGTAATATGTTAGCATGGTGCGTAAATATCAGATCCGATACCTACAAGATATCATATCCGATACGGATCTGACATATACAGTATCATGCTGATGTCAGCATGATACTTTAGAATACTAGATCTGGATACCTATGTATCTATAGGACTATGTCGACATCATCATGAAGGTATCATGATGTGCATAATATCTACGAAATACTTCTTTGATTTTAAATGTATCATATCCGGTATCTACGATATGATGCTGACATCGTGATTACATTACCTTCCGTATAGTCTTCTTTAAAGAAAATCATATCGGCAGTACTATGTATTATCCTAGGACGCCGACGTGTTCCATCACCCATGAGGGCATGCACAATGTAAAAATAAGGGGGGCCTTAAGCCTCTTGAGCGGTCGTTATACATCGTGGAGATGATCCTTATA | |||||||||
gi|88960179|gb|CI382057.1|CI382057 CI382057 Oryza sativa (japonica cultivar-group) callus Oryza sativa Japonica Group cDNA clone TTTTAGGACAGAGGGAGTAGG EST sequence (targeted fragment marked with yellow): GTCAACCTTTTTTGAGCTTTTTTTTTTAATTTTCCTTTTCCTATTACAGCTATAAAAGGTTTTTATCGAACTATGGAGTTCTCTACTCGGTTACATTTCCACTGCCCAACGTTTATGGATGGCGGCAACGCACAAGTTCTGATTATAAACCACTAAAAGCACAATTTTACAAGCATCATATATGTTACATACTCCCTCTGTCCCAAAATAAACCCGATGTGACACATACTAGTACTTGTGTCCAAGATGTATTAGGATGTGGCACATCCGTACAATGTTGGTTTATTTTGGAACAGAGTGAGTATATGTTAAGCAAGACTAATGCGGGCTTCCCTCTCGCTAATCTGTATCCGTTAGCTCCCACCTTGCTTGGGACTTTCTGAACATGAAGCCAAAAGGCACGTTCGATGCACTGAAG | |||||||||
gi|117233018|gb|CT854894.1|CT854894 CT854894 Oryza sativa (indica cultivar-group) cv. Guang Lu Ai 4 Oryza sativa Indica Group cD TTTTAGGACAGAGGGAGTAGG EST sequence (targeted fragment marked with yellow): GCATATGGTGGTTGCAGCATCTGCTCTGCAGTATTAATTAAAAAGGGAAACCTTAACTCCCAAAAAAAACAGAGAAGGGAAGAAAAAGAAAGCAAAAAGGAAAAAGGAAAAAGAAAAAGAAAAGACAAGGAGAAAAGAAATTTGAAAACAGAGATGCTTCGTCAAGATTGTGCATTTTTTTCATGTTTTTTTTTGGCTGTGTACAAGCGTAATTTTGACCTGATCGACTCAAGGCAGTCGCTCGAGGCCTTTAATTTCGTAAAGCTTCATATGCATGAGTGTGCAATTGTGTGCCTATAGTAGTATAGTACATGTTTTCTGTTTGAAACGGAGTCAAAGATCTCTCTCCTGCCGACCACCCATCTAAAAGAAGGCCATGTGTACATCAATACATGTACTGATATATACTCCCTCTGTCCAAAATAAATCAACTTTTGTACATGTCAAATTTAAAAAAAAAAAAAAAGGGGGCCCCTTTGGCCCTCGGGGGGGGCCCCGGCCCCCAATTCCCCCCTAAAAGGGGGCGAAATTCCCCCCCCCCCCGGGGCCCCCTTTTTTTAAAACCCGGGGGGGGGGAAAAACCCGGGGGGTTCCCCAATTTAATTCCCCTTTGGGAACAACCCCCCTTTTTCCCCCGGGGGGGGAAAAAAAAAAAAAAGGCCCCCCCCAAATCCCCCCTCTCCCAAAATTTTTCCCCCCCCTCAAAGGGGGAAAAGGGAAACCCCCCCCCCCGAAGGGCCCCCATATACACCCGGGGGGGGGGGGGGGGGGGTTTACCCCCAAGGGGGGAGACCCCTTAAATTTGTGGGGGGGGCCCCCAAGGGCCCCCCCCCTTTTTTTTTTTTTTTTTTTCTCTTTTTTTTTTTTTTCCCCCCATGGTTGGCGGGGGGGTTTTTCCCCCCGAAAAAAATGTTTAAAAAAGGGGGGGGGGCCCCTCTTTTTTGGGGTTTCCCCAAATTTTTTTGTTGGTTTTTTTCGCCGCCCCCCCCCCCCCCCCCCCCCCAAAAAAAAATAATTTTTTTTAGAGGGGGGGGGAGTGGGGGGGGGTTTCCTCCCCAGGGGGGGGGGGCGGCCCCCCCCCCCCCCCCCCCCCAAAAAAAAAAAAGAGAGAGGGGTTTTTTTTTTTTTTTCCCCCCCCCCCTCTTTTTTTTTTATTGTGGGGGTGGGGTGGAAGGGGGGAGAGACACCC | |||||||||