| mature miRNA: ATTTGGAACAGAGGGAGTACT species: Panicum virgatum database: miRNEST The numbers on the right side of the alignments show a score calculated for them. When calculating the score, a mismatch is given a score of 1, bulge: 2, and wobble: 0.5. |
| Predicted miRNA targets | |||||||||
gi|304479638|gb|HO277716.1|HO277716 CCTZ495.g1 CCTZ Panicum virgatum Pathfinder normalized leaf Panicum virgatum cDNA clone CCTZ ATTTGGAACAGAGGGAGTACT EST sequence (targeted fragment marked with yellow): AGGCAGGAGGTTGTGTTCTCAGGCTAGCTGGACTTTATAAAATAGATAGAGGTGCTCATGTATTTTGGTTGAGGAAAGGAACTTTGGACACACGACCAGATCATATCATCAACCAGATTCATTATGAGGATGCTGCTTCCCTTGCAATAGCGATCATGAAAAAGAGACTCTGGAATCAAATCTTTCTTGGCTGTGACAATAAGCCTCTTTCCAGGCAAGAAATAATGGACGCTGTCAACAGAAGTGGAAAATTTGACACAAGTTTGAAGGATTTACTGGTACTGACGGTCCATTGGGCAAGAGGATGGAGAACTCGAAAACTCAGGCTGAGATCGTGTGGGAGCCTAAGTATCCCAGCTTCACTGAATTCCTTGGTCTCAGTAGCTAGCAATATCCTTGCATAGTGTTCAGTTCTTCTGACTCGATTGAGTAGCAACCGCAATGAAGTCAACTGCAAGTACTCCCTCTGTCCCAAATTATTAGTCGTTTTGATTTTTCTATGTGCATAGTTTTAGTTATGTATCTATATACGTGATATCTAGATGCATAGCAAAATCTTTATAACTAGAAAAGTCAAAACGACTAACAATCTGTAAATCTGGGCTGGAGGCAGTATCTTTCATTGAACTG | |||||||||
gi|197951338|gb|FL695340.1|FL695340 CCGA4258.b1 CCGA Panicum virgatum apex + stem (H) Panicum virgatum cDNA clone CCGA4258 5', m ATTTGGAACAGAGGGAGTACT EST sequence (targeted fragment marked with yellow): ACGGAGGATAATGGAAGGGAACCATCGAATGGGAATGGTCGCTATTGATTCGGCAACGGGTACTGTAGCTAATTGTGGCTGTGAGGTGGAAATTTTGGAGTGTGAACCACTTCCAGATGGGCGCTTTTATTTAGAGGTAAATTTTGTATTATTACCAGATTTTAAGACAACATTACTACATTCTGTATTAGTTTTCAAACTGCTTTCTGTTGAGCAACTGCCCAAACTGCATCTCTGTGAGGCTGTGAGCTTACAGATCCCATGTTGTGTTGCTGCAGACTTCAAATATTATATTTCTTAGTATTGACCTGTCTACACCGATTGTCATATATGCTTTTAGATTCAACATTGTTTTGGAACTTAGAAGATTATAAGTACTATTTTCAAGGAATGTTTCCTTCGTTTCGCAATCCAAGTCCTTCATTCTTGTTACATTAGAAGAAATATCATGTACTCCCACTGTTCCAAATTATAGTTCGTTTGATTTTTTTGACTTCAAGTTTGCCCACTCGTCTTATTAAAAAATTTGATGCAAAATATCACTTCTTTTGTTGTGGCTTGCTTTATTAATAGAAGTTCTTCAAGATTGACTTAAATTTGACGACATTTGCACAAATTTTTTTGAATAAGACGAGTGGTCAAACTTGGGGTCAAAAAAGTCAAACGAACTATAATTTGGAATGGAGGAAGTACTGAGGAGAACAGAATATAAAGACAGTATCTTTTCTGTCAGCTGCAGAAGACTGACTTGCATAGTATCACTCTTGTAGTTTTCAAGTCTTGTCCACCTTTTTTTTTTTCTACCA | |||||||||
gi|198172433|gb|FL883059.1|FL883059 CCGN5018.g1 CCGN Panicum virgatum etiolated seedlings (L) Panicum virgatum cDNA clone CCGN50 ATTTGGAACAGAGGGAGTACT EST sequence (targeted fragment marked with yellow): TTACCAAGCAGCAATCCTGTTCGCGACCGGCCCCTTTCGTGGATCAGCTCCTCACCAGCCGAAGCGTCTTCGCCCACAAATACACTTTCCCAGTTGTGGGCTTCATCGTGCTGTCGTGCGTGATCGCGGTGTCGGTGAACTTCAGCACGTTCCTGGTGATCGGGACGACGTCGCCGGTGACGTACCAGGTGCTGGGGCACCTCAAGACGTGCCTGGTGCTGTCGTTCGGGTACACGCTGCTTCGCGACCCCTTCACCGCGCGCAACATCCTGGGCATCCTCGTCGCCATCTTCGGGATGGCGCTCTACTCCTACTTCTCGGTGCGCGAGGGCAGGAAGAAGGCCGCGGGCGACGCCCTCCCGGTGTCACAGATGCCGGAGAAGGAGACGGAGCCGCTGCTGGCGTCGACCAAGGACGGCGGCGACGCCAAGAAGGCCAACGGCGTAGCTCACGACTGCTAGATGCTCCTTTCTCTCGTCTGTTATAGCTTAGCCAGCTCTAGTGTGTCGCTACGCTACGCAGTACGCCCACTGTTCTGAATCTGATGTCGGGGAAGCAAGAATTCCTTTCGTTTATTTGTACGATAGAAAGTGGGGGCGCGTTGTACTCGTCCCCAATTAAAAATCGATGGTTCCTCTC | |||||||||
gi|304505667|gb|HO300708.1|HO300708 CFCB1089.g1 CFCB Panicum virgatum WS4U normalized leaf Panicum virgatum cDNA clone CFCB1089 ATTTGGAACAGAGGGAGTACT EST sequence (targeted fragment marked with yellow): CAAGGATAAGGATGGTGTGCTGCACATCGCTGAAGATGATTTGATGGATGATCCTGCAGTTGTTGACGCCATAGACGAAGAGACAGAATTTACAGCTCTAGTGGAGGAGGAAGAGGCCCTTCTTGAAACGGTACTTGGTGAAAGGTGATGAATGGCAAGGAGGGGGTACTTGTATAGGAAGAGGAGGATGAGGAGACCTGAATCCACTCCATCAAGCAGTAGAATGAAGAAGAAGAAGCTGGTGAAATATACCAGTATGATTAGATGTGCAGCGCAGGGCATTTGAGCTGCCAACCCTAGGATGGATGATGATGTAATGTTAATCGTCACATACCGCTGCTGCTGTTAATCGTCGTCTGTGTCAACTAGTGTAGTATAGATTACTGAAGGAGCTGCAAGGAGTCCTTTTTTTCCTAATCAAATGATTAGGACAACCAAAGCTATTGCTGGTTCGCTGATAAACTGAATTGCTCCCTCTGTTCCAAGGTGTTTGTATGCATCTAGAAAATTCATAGGTGTTTGTATGCATACGACCCATAATTTGGGAGTACCAAATAAAATTGCCCCAATCTATTCTG | |||||||||
gi|197975901|gb|FL718279.1|FL718279 CCGB427.b1 CCGB Panicum virgatum apex + stem (L) Panicum virgatum cDNA clone CCGB427 5', mRN ATTTGGAACAGAGGGAGTACT EST sequence (targeted fragment marked with yellow): GGGAGCTCCTCGGCACAGAGGGGTGGTAAGGTCCCGAATGGTGCAAACATGGATGGAGAACTCAACGAGGAAGAGTTCTTTGAGTGGTTCCAGAACGCTGTAAATTCTGGCATGTTCGAAACTACATTCGGCGCACAAGGTGACCCGACTTCACCTGGTGGTGGAAGCAACGGAAAGGGTGGCGGTAGTAGTAGGAAAAAAAGGAAAGGAAAGAAACAGTGGTAAGTGAAGCGAAGCAGGTTGGTTCTGGCGATAACAACTGGGCGCAGAGATGAAAAGGAAACAGAATAAAAAAAATTGATTATGGAATACAACTCTGAAAAGTTGGTCCCGACTTGAAGATCGGTGACCTCAGAGCTCCACTGAAAATCCCGGTTGAAGAATGTTGGCGAATGTTAATCTTTCGCCGTGACCATTGGGAGCTTGCTTCTGACATGTTGCGAAAAGCTACAACTGAAATGCAAAATGCATGCAGATATATTAAGATTATACGCCCTCTGTTTCAAATCATAGATCATTTTGGCAAATCTAATATATAGTTTTTTCGGTGCGCAAGG | |||||||||
gi|197962562|gb|FL701369.1|FL701369 CCGA7270.g1 CCGA Panicum virgatum apex + stem (H) Panicum virgatum cDNA clone CCGA7270 3', m ATTTGGAACAGAGGGAGTACT EST sequence (targeted fragment marked with yellow): CAAGAAGAGGAAGATGGGTGTACCTAGTGAAAAAGATGCATCTATTTATCCAGAGCCAAGTGAGATGAAGGCAATAGCTGCTGAAGGGGTTATTACTTGTCTCGTCTGCAAGATGGAATAGAATCCCTTGAGCAAGGATATGAAAGGAGTGGCGGAGCAGTGGAGCTTCGTCCCCCATGTTGTCAACGAACTGTTGAAACTGGATGAAGCGGAAAAGATGCATCTCTGACAAAAAAACAACTCTCGCAACTAGCAATCAAATGTAAGAAGATTTATCAGGCTGAGTTTGCGTGCATGGACAGCGACGACAAGAAGGGGAAGAAGCATCAAAGCGGCTCGCCTGTAACCGAGCAGCGGAGGAAAACTTAAATCAGGTGATGATCACTACGACAGTGATGACACGATAGAAATGACGGAGGAAGAGATAGATCTAGCCTGCAGACAACTCCCTGGGCTGTGCGGATGATACTGAACTAGGTTAGCTGAGGAAAGTGTGCCCTTCCTTTAGAACAGGAGAGCAAGGATGGTGGATGGCAACCTCCAATCTTTTCCAGCTGGCAGCTGCCACCCAAATATACTGTTGTCTGAATTTGGTAGGTACTCCCTCTGTTCCAAAATAAGTGCATTTTTTTTTTACTTTCAGGAATCGTGTTTAACCGTTTGTCTTATCGAATTTTTTTATGTAAATCATAAAATAAATAAGTTATTAGTAAAGTATCTTTAGTG | |||||||||
gi|198339536|gb|GD008984.1|GD008984 CCHZ2698.g1 CCHZ Panicum virgatum abiotic and biotic stress treatments (N) Panicum virgatum ATTTGGAACAGAGGGAGTACT EST sequence (targeted fragment marked with yellow): TATTAGAACAGACCATATAAGTTTCCAATTGTAACTAGAATCAGGAAAGCCCTTTTAGACAGATGAGACCTACTACTGGACAATGGAAACAAACAGATGGGCAGGCAACAAACAGGACCCTGCATGATTTATTTTGTTTCATTTTTGGGAAATTTGTTTGCAGGATACCAGAAGAATGTGAATTTTGTCTAGGACACCCTTGTGTTTGATTTTGGCTGTAGGGTTACTCACTCTGTTCCAATTGCTCTGTTTTGCAATGTTTCTCCATAGCCTGTA | |||||||||
gi|304467807|gb|HO265942.1|HO265942 CCTY3454.b1 CCTY Panicum virgatum Kanlow normalized leaf Panicum virgatum cDNA clone CCTY345 ATTTGGAACAGAGGGAGTACT EST sequence (targeted fragment marked with yellow): TCCTGGTACCTGTCTTATACTTTGGTACAGAACACTTTTTTTTTATTACTGAACTTTTATAATATGTGCTCAACTTTTTGCAATGCATACTGAGTTATGGTGACTTAAGTTAGGTCCATTAGTCCATACTCCATACCTGGGCATATCTATAACAAGCCTAATGTATGTATTTGATTGAAGGATGTGGCATTTTTTCAGTGGATCTATAATTATTTCCAGTCTTTATTAAGAACATTTACACTTCTCCATTAGCAAAGTTGTTCCTGTAACTTTTGGTAGGATGCTTGAACTATATACTTAATGATGAGTATTGTTACCAGTTTTATCTTCTACTCCCTCTGATCCAAATTTTAGGTTGTTTTGGTTTTTCTAGCTACATAGTTTCACTACGTATTTGTACATAATGTATATATAGGGGTGTAGCAAAAGCTATGTGCGGAGCGAAATCTATGAACCTAAAAGAGCCAAAACGACCTATAATTTGGAATGGAGGGAGTATCTGAAAGAAAGTTTCATCCATAGTAGCTTTCTAATTTTCTGGTGTACTTAAATGGTTTTTTTTTTGTGTGTGTTTGAATTCCAGTATCTTTGATTATAGCTTTCCACATATAATTAAATAATGCTGTCTCTAGAACCTTGCTTTGCATCATCCTTAAACAGTTACTTCTTGCATCTATAATCAATAACTGTTGGCAGCTCAGTTTGTACTTGAGTTTTCATGTTTCTTTGGTTTGGTAGATTAAATTTCTATCTTGCTGAAAGGAACTATATCTACAATGACAGCCCCACC | |||||||||
gi|198096838|gb|FL823310.1|FL823310 CCGG18898.g1 CCGG Panicum virgatum late flowering buds + seed development (H) Panicum virgat ATTTGGAACAGAGGGAGTACT EST sequence (targeted fragment marked with yellow): TAAGCCCAGTATTCGGAGGGAGAACTGGTTTCTGGGTATTTGTAATTGCAACAGCATGTCGTTCTATCTCTCCACAACAACGATATTTCTGTTTGTGTTTGCCAGACTAACAAGGCATCGCCGGTTTTACCTCATTTTGTCTGCTGCACTGGTGTTTGGAGCAGTTCTGTCCATGGTAACGGCATTTGCGACAGTAGTAGGGCTAACATTAGACCCTGCAAACAGCTGGGACGAGTCTATTCTTATTTGGCTGGTGTCAAATTTAGCATTTCCGATATGTCTGCGGGTTGCAATGCAGTTGTGGATGAGCAAACATCGCTGGCAGGACATATCTAAAGTTGTAGCTCAAGCCATCCTGCTGATTTATGTGGTCCGAGCTTTGATCATCCCCATGCAATCCCTGGTTAAAAGCATTCTGCCCAGGAGACAAGAACCCTGCAGCTGGCCTGGATGTGTGAGACAAGGTGATGTGGTTTTCTCATACCCTACTTGAGGTTTGTAAAATCTACACATCTGTGAAATTGTTCAGGGCATTTTGCTTTTCTCAGCTAGAGTTATTGGGTCTGTCAGAAAGATCTCTTCAATAATACCATTTGTATAGGAGTAAGTGATGTTGAACTAAGAGACATCATGCAAAAGCAGTTCGGTATTTCCTCTGTACCAAATTTTGTTTTTCATCTCGCATTGATGTATTAAAACTGGCTGATGGTGTAATGGATGCAATGTTGCACTTTTTCCCCAGACCCCAGGCGACAAGTTTGGGGTCAAGTTTGCTGATGCGTGC | |||||||||
gi|198024547|gb|FL762308.1|FL762308 CCGC11059.g1 CCGC Panicum virgatum early floral buds + reproductive tissue (H) Panicum virga ATTTGGAACAGAGGGAGTACT EST sequence (targeted fragment marked with yellow): ACGGCCCAGCCCGTGGAGCTGTCCGCCAGAGTGCCGCTCTGCGCGGGTCCTCGCGCCCCGCGGAGGCCGCCGCGGGGCTCCACGGCGGGTACGGCCCGGTGGCCGCGATGTTCGCGCGGCGCGGGTGCACGGTGATCGCGTGCGGCGTGGGGGCGCGGCTCGACCCCCCCGCGGAGGAGGCCCTGGCGCGGATCAAGGGCGCCTGCGCGGAGCACGGCGCGCGGCTCGCCGCGGAGAGCGCGCCGCTCGCCGTGGCGCGCGACGGCGCGGTGTCCGCGGGCGTCTGGCTGTCCGCCGGGCGCACCCGGCCGCGGCAGTTCACGTACCAGCGGATGGGCGCGGACTTCTTCTCGCCGGGCCACTGGCCGCTGTTCGTGCAGTTCGTGCGCGCGCTGGAGTGCCCCGAGGAGGCCCACGCGGACGACCTTCCCGGCGGCGAGCGGCTCACCGTACCGTCCGCCTCCGCCGCGCAGGAAGATGCCAGGGCAGTGCAGACCGTGTGAATGGACACGGCATTAATCGTAACTCCTCGATGTACAAATGCAGTATAGCACTACTGCAATGGTAGTTGTATTTTAGTAGTGCTCCATTCAGTAGGATTAAGCAGTAAGTACATTTTAGCTGCGAGATGAGATGAGTTGATCCTTTGTATCAGTGGGAACCAAGAGCAGGAGTGTACCACTATATTGTACTCCCTCTGTTTTAAATTATAAGTCGTTTGATTTTTTTT | |||||||||
gi|197985652|gb|FL731681.1|FL731681 CCGB12150.g1 CCGB Panicum virgatum apex + stem (L) Panicum virgatum cDNA clone CCGB12150 3', ATTTGGAACAGAGGGAGTACT EST sequence (targeted fragment marked with yellow): GGGAGGTCACTTAAGCCATTTGGGCGCTGTGGTGGGATGAGACAGTTCCTACCGTTGTGACCAGAGCAGAGCCTCATAACCAGGCTATATTGCATCCGACTCAGGCAAGAGTCCTTTACAGTCCGGGAGAACGCAAGGTTGCAGGGCTTCCCTGATTACTACCGATTGTTTGGTCCGATCAAGGAAAAGTACATTCAAGTCGGCAATGCAGTGGCTGTCCCTGTTGCCCGGGCACTGGGCTACTGTCTGGGGCAAGCGTTCCTGGGTGAATCAGAGGGGAGCGGCCCACTGTATGAGCTGCCTGCAAGTTTCACCTCTGTGGCGAGTGTGGCTCATGCGAGGGCTTCCTCTGTTAGCACTCCTGCAGGGGAGGTGATTGAGCAGTAAAAAGAAAGCAGAACTGAGCAAGGAAAGACCAGAGCAAGTCTGGTTGGGTTTGATTTGGGTCCATCCAAGAGCATGCTACTAATAATCATGCCATCTTGTTCTAGTTCATAAGATTGGATTGATGAATGTAGGCATGGCGGCAGTCGAGTTGGAGTGCTTGTTGTACTGTATGGTGCGGTGTCAAAACATTAATTGGTGGAGACCCTTCTCATGTCTTCTCAATTGAGCAGTCTGCTGATTTGATGCTGTGTATCATGTATGTGTATTCAGACCAACCATTCATCTAATTGATCGATGTAAGGAGAACCAACTGATGTGTAATTGTGTTCAACGAAAGTAATGTACTCCCTCTGTTCCAAATT | |||||||||
gi|198078773|gb|FL807349.1|FL807349 CCGG6601.g1 CCGG Panicum virgatum late flowering buds + seed development (H) Panicum virgatu ATTTGGAACAGAGGGAGTACT EST sequence (targeted fragment marked with yellow): ATATGATATGGATGGTACAGGGTTTATTGAACGGAAAGGAGGTTAAGCAGATGTTAATTGCTCTTCTAGGGGAATCAGAGATGAGGTTATCTGATGAGATCATTGAGACAATCTGGACAAGACATTTTCGGATGCTGATGCGAATCAGGATGGGAAAATAGATAGAGCCGAGTGGGAGAGTTTTGTCACAAGAAATCCTTCCTTGATGAAGATAATGACTCTGCCATACCTCAAGGACATAACAACAACATTCCCCAGCTTTGTGTTTAACTCTGAGGTCGACGATCTTGTCACATGACCACAATTCTTCCATAGATGTATAGTTAACGAAAGGTTTTGCTTTCCTTAAAGCGCAAAAAGCAGCTTGGTACTGGACATGAAAATTTCTAGCTTAGTATGAGGGAGGGTTTATTTATGCGACTGCCAAGGAAGGCGTGTCAAATCAGGAGCCACAAACTTGCTCGACAAGTGTGGTATTGTAGTTTTAACACACGATGCTGGTGCTTCTGTGTTGGTGATTGCGAATTAGTAACAGTATTCAGAGATTGAACATTTTACATGTTCTTTTACCAGTGGGAAGTTTGTGGTTTACTTGTGCTGATCTCATTTTATTCATGTCAAAGTAGTACTGCATTCGACTCCCTCTGTTTCAAATTGTAGGTTGTTTTGACAAATCTAGATACATAATTTTTGCTATATATTTAGACAAAGTGTATATCTAGGTGCATAACAAAAGCTATGTATCTAGATTTGTCAAAATGACTTATAATTTGGAACGGATGAAATGTTCTTTTTTTGTAC | |||||||||
gi|198134302|gb|FL861027.1|FL861027 CCGI6669.g1 CCGI Panicum virgatum etiolated seedlings (H) Panicum virgatum cDNA clone CCGI66 ATTTGGAACAGAGGGAGTACT EST sequence (targeted fragment marked with yellow): GCGGCGCGGGTGCACGGTGATCGCGTGCGGCGTGGGGGCGCGGCTCGACCCCCCCGCGGAGGAGGCCTGGCGCGGGTCAAGGGCGCCTGCGCGGAGCACGGCGCGCGGCTCGCCGCGGAGAGCGCGCCGCTCGCCGTGGCGCGCGACGGCGCGGTGTCCGCGGGCGTCTGGCTGTCCGCCGGGCGCACCCGGCCGCGGCAGTTCACGTACCAGCGGATGGGCGCGGACTTCTTCTCGCCGGGCCACTGGCCGCTGTTCGTGCAGTTCGTGCGCGCGCTGGAGTGCCCCGAGGAGGCCCACGCGGACGACCTTCCCGGCGGCGAGCGGCTCACCGTACCGTCCGCCTCCGCCGCGCAGGAAGATGCCAGGGCAGTGCAGACCGTGTGAATGGACACGGCATTAATCGTAACTCCTCGATGTACAAATGCAGTATAGCACTACTGCAATGGTAGTTGTATTTTAGTAGTGCTCCATTCAGTAGGATTAAGCAGTAAGTACATTTTAGCTGCGAGATGAGATGAGTTGATCCTTTGTATCAGTGGGAACCAAGAGCAGGAGTGTACCACTATATTGTACTCCCTCTGTTTTAAATTATAAGTCGTTTGATTTTTTTT | |||||||||
gi|304504903|gb|HO302968.1|HO302968 CFCB2404.b1 CFCB Panicum virgatum WS4U normalized leaf Panicum virgatum cDNA clone CFCB2404 ATTTGGAACAGAGGGAGTACT EST sequence (targeted fragment marked with yellow): AAGGTTGATGTTTATAGCTTTGGACTTCTCTTGTGGGAGTTGGCCACTGGTTCACTCCCTTTTGAAGATATGACACCACTCCAAGCAGCTTTTGCAGTTGTCAATAAGAACTTGAGACCAGTTATTCCTTCGAGCTGCCCGGCAGCAGTAAAATTTCTGATTGAGCAGTGTTGGTCCTGGCAACCAGAGAAGAGGCCTGAGTTTCGACAAATTGTTTCAATCCTTGAAAACCTGAAGACAGTTCTTGAAAGAAATGGAACACTTGACAAGATCCCATGCTTCATCTGCGAGCCCCAGGAATGCAATGATCAGAACAAGAAGAAGGTTTCCACCTGGATCCAGAGGCTGTCGTACACTCAACCTGATTTCTCCGGACCCCCACCCCCGAAGTTACTGTAATTATGCATCTTCTTATCAATTTTTAGTAGCGTGTTATCTAGTACTTCCTCTGTTCAAAATTAATTAAGTCATTCCAACTTTCTTGAG | |||||||||
gi|198351058|gb|GD021580.1|GD021580 CCHZ10006.g1 CCHZ Panicum virgatum abiotic and biotic stress treatments (N) Panicum virgatum ATTTGGAACAGAGGGAGTACT EST sequence (targeted fragment marked with yellow): GATGAAAAGAAGTGTTTCCTTGATAGCTGAATGTCAAGCTCTCCAGACGTTAATACTAGGAAAGCCCTAGCTAATGCGTTGGCTACAGCTCCATCTATGTGGACTCTGGGGAACGCTGGCATGGGTGCACTTCAGAGATTGGCTCAAGATCCCAACTATGCTGTTGCTAGGGCTGCATCAAGAGCCATTGATGAACTCAAAAAGCAGTGGGAACTTGAAGAAGGCGACAGCCTGAGGTTTGTAATGAACCAAAATTTGGTTTCTGAGGGAACTGATGATGAAAGTTCAGCAGCAGACGACACAACGTGAGGTGCAAACAAGATGAAAAATTTCAGTTCCAAAAGTACCATGTACCAAAGCATAACAAAACATCATGAGCTGCACCTAAGGCATTCCAGTGTGAGCTTTAGGACTGAAGATCAGATAGACGTGTAAGGAAATCTCACATATACTTAGTCGAAGGGGGAAAAAAACAATCATGTGCTCTGCGAGCAGAATTCATGTCTAGGACAAAGTAATTTCAGGGAACAGCGTAAATAGGAGAAGTCTGTTCCCTTTGGACATTGTTTTCGTATATGAAAGCAAAAGGCTACTTCCTCTGTTCCAAATTGTTCCAAATTGTTCCAAATTATAGGTCGTTTAATTTTTTTTAACATCAAATTTGACCAAAATTTGTGTAAATATTGTAAAATTTAAGTCAGTTTTTGAGGAATTTGTATTGATAAAGCAAGCTATAAC | |||||||||
gi|198183160|gb|FL895168.1|FL895168 CCGN11855.b1 CCGN Panicum virgatum etiolated seedlings (L) Panicum virgatum cDNA clone CCGN1 ATTTGGAACAGAGGGAGTACT EST sequence (targeted fragment marked with yellow): GCGACGATGAACCAGTGCTTCTACTACCAAGGGGTTCATCTGGGCTCCTCGTCGATGGCAACGGCCATGACCAACTTAATTCCAGCCATCACCTTCGTCATGGCTGCATCAGTCGGGTGAGTACCAGGAAGAGAATCCCGTTTCAGCGCACTACTCCTTCTGTTTTTATTTACATATTGTATTAGATTTGTTCTAAATTAAATTTGGCAAATTTTGATCAAATTTATAAAAATAATAATAACATTTTCAATACCAAATTTGTTTTATTGGATCCACCCTAAAATATATGTTGATATTGTATATGTTAGATAGTATACTTGCTAATATATTTTCTATATACTTGGTCAAAGTTGGTCAAATTTGACTTAGGACAAATCCAATACAATATGTAAATAAAAAAGAAAGGAGCAGCATAAACAAGTACTCACCAATGGCGGCTGATAGTGCTAGCTAGTGGCACTGTTTCTCACTTTCTGTGTTCCACTTGTCGGCATACTGCAATTATTTGGCTGCATACGTGGCTGCACGTACGCCTGCACCTGTGGAGCTACAGGCGCGCTGGTGCCCAGACCAACACGCCACCTCATCACTCAATAATGCAAACTTTTTTTTTTTTGCCGCGACCATCGTCGCCACCACATGAACAACACATGATGCTGCCTGCCGTGGTAGCGAATCAGATCACTCCCTTTCTTCAAGGGATAGATCAAGATCTCAGCCACCTTTTGATCAACTGCTCCCTCTGTTCCAAATTATAATTCATTTGACTTTTTACTCTAAGTTTGACCACTTGTTCTATTCAAAA | |||||||||
gi|304545502|gb|HO340812.1|HO340812 CFHF2211.g1 CFHF Panicum virgatum U601 normalized leaf Panicum virgatum cDNA clone CFHF2211 ATTTGGAACAGAGGGAGTACT EST sequence (targeted fragment marked with yellow): ACTCCGGGCCACAATAAAGTCTTTTAGAATCTAATCTCATAGAAGCACTACATACAAGCCTATGTTTTTGGGGAGTAAGGCAAAAAGAAGATTGGAAAGAGCTGTCTGGAATGATACATCATTTCTTGCGTCTTTGGATGTCATGGACTACTCCCTTCTGGTCGGCATCGATGAGGAGAAGAAAGAGCTTGTTGTGGGCATCATCGACTTCCTGCGGCAGTACACCTGGGACAAGCAGCTGGAGACATGGGTGAAAGCCTCAGGCATCCTGGGCGGGCCAAAGAACGAGTCCCCCACTGTGATTTCTCCAATCCAGTACAAGAAGAGGTTCAGGAAGGCCATGTCGAGGTACTTCCTCGCTGTCCCTGACCAGTGGACCTCCTGAGGCAGCTTCCTCCTCTTTGGTGTTGTAGCTGCTACCCTGTCAGCGAAAGCATCACCAGATCAGTATCCTTTGGCAACTTTTGACCGAAAGGTTGGACTGAGACGAATACCGCATTCTTTAGTTGCTTGTTGCTCCATTTTTGAACCAACAGGTAACATGTCTAGCTATAGAGCAGATATATGAGAGGATCAGGCCCCTGACCTGGTTGGACTGTGACACAAGCATGACCATTGCAGTGTCCAGACATATCTGGGGAAGGCTTGATGCATTGTAAATTGCGGTGAGCCTCGGCGGGTTATTTAACGCCGAGTCGCGCTGTATTCTTTTGATTACTCCCTCTGTTCCAAATTATAAGTCATTTCAGG | |||||||||
gi|254542542|gb|GR880670.1|GR880670 SW_H39_R9_O12_034_1 cDNA library of switchgrass vascular tissue derived by LCM Panicum virga ATTTGGAACAGAGGGAGTACT EST sequence (targeted fragment marked with yellow): TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTCTGCAAATTTAACCGTTCCAAACCAATTCATTATTGATACTACGCAGAGGGCATAAAACCATAGAAAATACAGGATCCCAAATGTAACCACAGATAAAGATAGTCAGATACGATGCCACACCCAGCAATCACTGCACTTGAGTTTACTACAGCAAAAGCCAGCTCAAGCTAAGGTGAATGTCTCGGTACAAATCCTTTGTTGCGATACACGCCTTTTTCGATTTAAGTTTCGAGATACAGTTGCTCCCTCTGTTCCAAGATCGGCCTTCTTTGGGAAGCTACTTGGGGCCGACATCCTTCAGCGCGCAGATCTGCTCCTCCCCCATTGCAGACTGGACAGTCACCACAAGGTCCTTCCCGCTGTCAAATCCTTCCTTGATCTGATTAACCAAGCATTTGATGGAGCAAAGACTTTTAGCAATCTTAATATATAGATAGCTAGAGTTAAAATGACAGCACAAAAGAGATGCAAAAGTGCAAGGACAAAGAGTTCCAACAATCAGAACTTTTCATTAGATAACACTAGATGCATTTAACTAGAAACAGCACAAAGCCAGGCATGAGCCCAGAAGAACTGATGTGGTGACAGAACATTATAGATAACAATGCATGTTAATCATACTTAAGTCTGGCAAGTACTGGGGCAGGGCATACCCC | |||||||||
gi|198312639|gb|FL978161.1|FL978161 CCHY14282.g1 CCHY Panicum virgatum callus (N) Panicum virgatum cDNA clone CCHY14282 3', mRNA ATTTGGAACAGAGGGAGTACT EST sequence (targeted fragment marked with yellow): GCAACTTCCTGGAGGAGACCAAGTATGCCAGGGAATCGGCGGGGCGGCGGCAACTGCCCAACTGACGATTTTTTCTCCGCAAAGCCACACAATGCAGGGGCGGCAGGTGTATCAGGAGCGAGCAGAAAACCACAGAGGGAGCGAGGGGTGGAGTGGTCTGTGATGCTTGGGACCAGTATCTTGGGATGGAGCATACTGACACTGCACTCTACATGGCCTATACAGTGAATCAGAGGTTTCAGCAGTAAGCAAAGCCGTGTTGCCGTGATCACAGCCTCACAGATAAGTGATGACGCCGATTTCTGTAGAAAGTGGGCAAAGGGGGAATCAGTCATGGTGTTGCCTGATACGTGGTCAGAATATATTGTAGCTTGCACAGTCGCCAGCCAACGAGAACCATGGTTTGAATGTTGCCAAGCATCCGGACAAGCTTTTTTTGATTGAGTTGAAAAGCTTCCAGTGGAGAAACAGATGAGTAAGAGCCATTTTATGGTTGCTGTGCACTGGCGCGTGATGCCCTATGGAATTTGTTATGGAATATTAGATAGTACCCCCTCTGTTTTAAAATGTCCTAAACGTCATATATTTAAAAACAAAATGAGATTTTTGGGGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGAAAAAAAAAAAAACAAAA | |||||||||
gi|169691954|gb|FE623589.1|FE623589 CBYY489.g1 CBYY Panicum virgatum Kanlow crown Panicum virgatum cDNA clone CBYY489 3', mRNA s ATTTGGAACAGAGGGAGTACT EST sequence (targeted fragment marked with yellow): GGAAGATGCCAGGGCAGTGCAGACCGTGTGAATGGACCCGGCATTAATCGAACTCCTCGATGTACAAATGCAGTATAGCACTACTGCAATGGTAGTTGTATTTTAGTAGTGCTCCATTCAGTAGGATTAAGCAGTAAGTACATTTTAGCTGCGAGATGAGATGAGTTGATCCTTTGTATCAGTGGGAACCAAGAGCAGGAGTGTACCACTATATTGTACTCCCTCTGTTTTAAATTATAAGTCGTTTGATTTTTTTT | |||||||||
gi|198221971|gb|FL937391.1|FL937391 CCGP8536.b1 CCGP Panicum virgatum root (L) Panicum virgatum cDNA clone CCGP8536 5', mRNA seq ATTTGGAACAGAGGGAGTACT EST sequence (targeted fragment marked with yellow): GTTGCTGTTTTGCCAATTGGAGCTTGTTGTGCTTTGGTCTGGATGCGTGCGCAACTGCATGCAGAACAGAACAAAAGTGCGTGAGATGCTGAACTACAACAATCCAAACCCAGTTTGGAGTCTAGACATGCTTTCTGTGCCAAGAATCTCTAGTTTCTGGTGGGAGTCGGGATGCTGATGGCAACCGTTGCCGTTTGTCATGTGCTAGCGAGCGAAGACACTCCCTCTGTTCTAAATTATTATTTGTTTTTGTTTTTCTAATACATAGTTTTTGCTATGCATCTATAGGTGTATAGTAAAATTGATGTATCTAGAAAAGCTAAAATGACTAATTAGGATGGAGAGAGTACTCAACTGGTGATGTTTTGTTGCC | |||||||||
gi|198370995|gb|GD036694.1|GD036694 CCHZ9760.g1 CCHZ Panicum virgatum abiotic and biotic stress treatments (N) Panicum virgatum ATTTGGAACAGAGGGAGTACT EST sequence (targeted fragment marked with yellow): GGAGCTATGCCCATGCTCCGCATGATGCGGTTATCACTCGATGAACAGGAATGGGACAAGGCTACACCTTATGGGCTCCATCATCTCTCTTGCCTCAAGGAAATCCATGTAACCAAAGTGTACTACGACGACGATGGCATCACCAAATGGTCAGAGGAGACGAAAGACACCATTAGAAGCATATTCCAGGAAGCTGCTAATGCCGTTCCGAGTAGCGCAACAGTTATCATAGATGATTGGAGAAGCAGGAGGCCGAGAGAAGGGTAGAAGATGCACACTCGCGCACGAACCATGGGGACTATGGGTATACATTTTTTATCTACTCCAAGCATGCCATCCCGATTGCGTTTAATCCCTCTGTTCTAAATTATTTATTTTTTTCTATCTAAATTTGTATAGATGTTGATAAATATAGATGTATACACAAAGCACGTATATGGAATATTGGATAAATCTAATGAACGGC | |||||||||
gi|198339535|gb|GD008983.1|GD008983 CCHZ2698.b1 CCHZ Panicum virgatum abiotic and biotic stress treatments (N) Panicum virgatum ATTTGGAACAGAGGGAGTACT EST sequence (targeted fragment marked with yellow): CTGTGCCCGGGAAGACGAAGGCCGCGTGCATGAAGAGGGTCACTGAGCTCAAGCGAGACTTCCGGAGCACCAAGGCAGCATCGTAGGACAATGCGCTTGCCTGAGAATTTTGGGAGGGTGTCAGGCACTCAGGCTGAATGGCATGCATTGGCTAGCGAGGACAAAGTTACACGGCTTAGCTCCACTGAATCATGGAGATGCCAGATGAATAACGCATAATATTAGAACAGACCATATAAGTTTCCAATTGTAACTAGAATCAGGAAAGCCCTTTTAGACAGATGAGACCTACTACTGGACAATGGAAACAAACAGATGGGCAGGCAACAAACAGGACACTGCATGATTTATTCTGTTTCATTTTTGGGAAATTTGTTTGCAGGATACCAGAAGAATGTGAATTTTGTCTAGGACACCATTGTGTTTGATTTTGGCTGTAGGGTTACTCACTCTGTTCCAATTGCTCTGTTTTGCAATGTTTCTCCATAGCATATCATGTGCATAGACCCAAGAAATTATTACTCGTTTCAAGGAACAATCAATGTG | |||||||||
gi|198003855|gb|FL748986.1|FL748986 CCGC3424.g1 CCGC Panicum virgatum early floral buds + reproductive tissue (H) Panicum virgat ATTTGGAACAGAGGGAGTACT EST sequence (targeted fragment marked with yellow): GCGGTGCACATGAAGATCTACGATTCAGACATCCTGATTTTCGTGGGCCTTTCTTATTTAATCCTCTGATGCCAATTGTTTGTTTTCTAAATACCTCGATGCCTAATCATATTTTTGTTGAAATGATTAACTAATTCATAATCTTTTTCTCATCTTGTCTGCAGATCATAGACTATCAGAGAGGAGGAAGTGACTTAGCAGATCGAGCATCCACATCGCTGTGACCCAGGCCATTGATATGAATGCTATGAGAAAATATGCTAGGAAGCACAAGATAGTTATGGATCACATCAAGGATGCTACTTGGACGTGGTAATAAGCAATGTCCAAGCTGCATTAGTTTTGGCAAAGAAATACAAGATTGTATTGAACGTGTTGCCATGAATCTGGTCGATGGCAAAGAAGGACCTCCTGAATCCTGATGTTTGTGTCATTGGACTTGGCGGCATTATAGGGGATATTGAGTCAATGCCTTTTGTTGAAGCATTAGGTCAATTTTCATATTGTGTTGGTAAGGAAACATCAAGTCCATCCCTGAGCATGACAATTTTCCTTTTGGCGTGGTCCTTTGTATAGTTTCCTTTAGGCTTCAGTTGATGTGTTCCTGTTATGTACTGTAAGGCCTGTAAACTTCTGTTTGGTACACACCAGTCTTCTTTCTGTTCTGAATATAGTTGGTTAACAGGTATAATTAGCTTTTT | |||||||||
gi|197970293|gb|FL712894.1|FL712894 CCGA14953.b1 CCGA Panicum virgatum apex + stem (H) Panicum virgatum cDNA clone CCGA14953 5', ATTTGGAACAGAGGGAGTACT EST sequence (targeted fragment marked with yellow): GTCTATTCTTGACAAACGACCGATAGAGTCTGCACTTCCAAGTATTTCTAGGCCTATCATGTCCTTGGATGGGAATGAAGATGCCATTGTTGGAGCCCTGAAACAAAGCTTGAGACAACTGGAATCTCTTGGAGCACAAAGGGCAGGTCTTGAAGACATGCTAAAAGAAATGAAAAGAAAGGATGATATACTGCCTAAGTTGATGGCTGGTGTTGGATCACATGACGACCTTTTCAAGAAGGAGATTTCTAAGTATGATTCCATCTGTGCTGAGATTGCTGATAACATTGTGGCACAGGAACAATTATTGCTGCAAATACAGGCGCAAAATGAGCAATTCGCTACTGTATTCAATCTAGAGGATTACAAAGGTAACCTTCTAGTGTTCCTTTTCTTGTCATAGTTATGATAGATGCCTGCACATATTGAATTTTGCAGCTTGTTTTATACATTGAGTCCAAAAGTTACAACTCACAACAGGCTCTTTAGATTACTCATTCTGATTTGCCTCACGCCGACAAGGTTCTACAGACCTTTCAAATCATTAATGTGATCACTTTCCACTTTTATACTCCCTCTGTTCCAAATTATAAGTTGTTTTGGCTTTTCTAGATACATAGTTTTTCTGATGTATCTAGACCAAGGTTTAAAATAACCGGCCAAGGCCTTTAGCGGTTTGTTTTTCAAAGGTTAAGAAAGGCTATAGCCCGCTATAGCCCCCGATAAACCCATTTAAGAGTTTTGCCAAATAATTTGCATAAATCAGTTAGACTTGTGCCCTCAG | |||||||||
gi|198021526|gb|FL766838.1|FL766838 CCGC13830.b1 CCGC Panicum virgatum early floral buds + reproductive tissue (H) Panicum virga ATTTGGAACAGAGGGAGTACT EST sequence (targeted fragment marked with yellow): TGTAAAATGAATTATGCTGTTTCGCTTGTATGTTGTTTCAGACATCCAGTTATGGTAGACTCTGGCACGTTTCACATGTTTCCAATGTAACTTGTAACATGCTGTTACTGTCAGTATTGATGACGACCTACCTCTATTGATAAAGGTTATTGCTTGGCCCTATTTGTTTGAACTTCTGGGGGCTTTTTGGACTACTAGCTTCTGGGATGTCCAAAAGCCCGATGCTCCCAAAAGCTAGAAGCTGACAAGCACATGACAGGATACTTCTAGCTTCTCCTTTTGAGGCCGTTTGACTTTTGGAGATTCCGAAAGCTAATGGACAATGGTTCAAAAGTGCCCAAAAGCTCAAACAAACAGGACCTTAAGAAAGAATCATAATGGTAGGTGGGTTGTGATTACTACTGTCATTGGATAATTGATTTGTCAATGATTTAGCTCACCTGCTTTTTTTCTGAAAGCCATTGCGAAGTTGACCAATTCCTATTCTAGCTGTATTTTTGGATGATTTGCTGCTGCTCGTAAAGTGGTTATGGCTTAAATGGTAAACAAAATAGAAAACAAAATATTGGTGATTAATACTAGTGCATATTTGGTTTGGACTGTTAAAAGACTCATGCTTGTTATGTACTCTCCCTGTTTCAAATTGTAGGGTGTTTTGGCTTTTTAAGATGGGCTATTTGCAATACTGCCCTTGTTTTAAAGTCCAATTGCATGTTTGTCCCTATTTTTTCAATTTTGCATGTTTGCCCTTGTTTTTAGTCTTCCAGTTGCATGGTTGCCTCTATTTAT | |||||||||
gi|198322437|gb|FL989027.1|FL989027 CCHY19996.g1 CCHY Panicum virgatum callus (N) Panicum virgatum cDNA clone CCHY19996 3', mRNA ATTTGGAACAGAGGGAGTACT EST sequence (targeted fragment marked with yellow): ATCCTAAGCTGATGAAATTATCAGATAGTGACATCGTGGAGATAATCTTGTTTCCCGTGTGAATGAAGCCTGCCGAGTGCTTGATGAGGGGATTTCTCTGAAAGCATCTGACCTTGATGTAGCTTCAATTATGGGGATGGGCTTCCCTTCTTACAGGGGTGGAGTAATGTTTTGGGCTGACTCACTCAGCGCAAAATACGTGTACGACAGACTGGAGGCATGGTCAAAGGATTATGGGCAGTTCTTTAAACCCTGTGAATATCTAGCTGCTAGAGCTCGTCAGGGTGCATCTCTGGCTGCCAAGGTTGACGGTGCTAAATCGCGGCTCTAGGGTTTCACTGTTCATTTGCCTTGTCTCGTTTATTAGTTTACATGGAATTCAGACTCATGGAATCTCCAACTTTGAGGAGATGCTGGTGCCAAACCCCACGAGCATCAGGAGCTTGATTGTTACAAATTACAATTGTGTAGTTGCAAAAGCCACGCAGGGAATAGTACTGGAATGGAATAATAGGGAGGTCTAGCGATTGTATTGGCCTTTCTGGAACTGCTGTGGACCCGTCGCAGTAGTTTGTGAGATATTGTGCGCTTTCTGTTCAATTGAGGCCTGCATAGAACAAGTGATGTCCTCAGTTCAGCTGCTTTGTAACATGTACGTGTCAGCGTACTGCTTGGTTTAAATTTTTTTTCGTTGAAATTGGTCTAAAATTGTACTCCCTCTGTTCAAAATTATAATTTGTTTGATCTTTTT | |||||||||
gi|197985651|gb|FL731680.1|FL731680 CCGB12150.b1 CCGB Panicum virgatum apex + stem (L) Panicum virgatum cDNA clone CCGB12150 5', ATTTGGAACAGAGGGAGTACT EST sequence (targeted fragment marked with yellow): GGGGAGGTCACTTAAGCCATTTGGGCGCCTGTGGTGGGATGAGACAGTTCCTACCGTTGTGACCAGAGCAGAGCCTCATAACCAGGCTATATTGCATCCGACTCAGGCAAGAGTCCTTACAGTCCGGGAGAACGCAAGGTTGCAGGGCTTCCCTGATTACTACCGATTGTTTGGTCCGATCAAGGAAAAGTACATTCAAGTCGGCAATGCAGTGGCTGTCCCTGTTGCCCGGGCACTGGGCTACTGTCTGGGGCAAGCGTTCCTGGGTGAATCAGAGGGGAGCGGCCCACTGTATGAGCTGCCTGCAAGTTTCACCTCTGTGGCGAGTGTGGCTCATGCGAGGGCTTCCTCTGTTAGCACTCCTGCAGGGGAGGTGATTGAGCAGTAAAAAGAAAGCAGAACTGAGCAAGGAAAGACCAGAGCAAGTCTGGTTGGGTTTGATTTGGGTCCATCCAAGAGCATGCTACTAATAATCATGCCATCTTGTTCTAGTTCATAAGATTGGATTGATGAATGTAGGCATGGCGGCAGTCGAGTTGGAGTGCTTGTTGTACTGTATGGTGCGGTGTCAAAACATTAATTGGTGGAGACCCTTCTCATGTCTTCTCAATTGAGCAGTCTGCTGATTTGATGCTGTGTATCATGTATGTGTATTCAGACCAACCATTCATCTAATTGATCGATGTAAAGGAGAACCAACTGATGTGTAATTGTGTTCAACGAAAGTAATGTACTCCCTCTGTTCCAAATT | |||||||||
gi|198185133|gb|FL895239.1|FL895239 CCGN11895.g1 CCGN Panicum virgatum etiolated seedlings (L) Panicum virgatum cDNA clone CCGN1 ATTTGGAACAGAGGGAGTACT EST sequence (targeted fragment marked with yellow): AGCTAAATCTCAGCTAGATGGTGTCAGGACTGCAAGGATTTTCATCAAGCTAAAGATGGCGATGGATGGGTTGAGCAGTCCTTTCAACCTGTTTTATTTGGCATGCTGCAGAAGCTAGATTTACCTCATGCCTATGTTTGCGCAGAAAGCTACATATTTGATGTCACCGAGTGGTTCAACTGTCAGGGAATGAGATGCCCAGCAAACACTCACAAGCCAAGCTTTCATGTCAATGCCAGCATGGCAAAGCAGAGTAGTGGCAAGGGGAGCTCCTCGGCACAGAGGGGTGGTAAGGTCCCGAATGGTGCAAACATGGATGGAGAACTCAACGAGGAAGAGTTCTTTGAGTGGTTCCAGAACGCTGTAAATTCTGGCATGTTCGAAACTACATTCGGCGCACAAGGTGACCCGACTTCACCTGGTGGTGGAAGCAACGGAAAGGGTGGCGGTAGTAGTAGTAGTAGTAGTAGGAAAAAAAGGAAAGGAAAGAAACAGTGGTAAGTGAAGCGAAGCAGGTTGGTTCTGGCGATAACAACTGGGCGCAGAGATGAAAAGGAAACAGAATAAAAAAAATTGATTATGGAATACAACTCTGAAAAGTTGGTCCCGACTTGAAGATCGGTGACCTCAGAGCTCCACTGAAAATCCCGGTTGAAGAATGTTGGCGAATGTTAATCTTTCGCCGTGACCATTGGGAGCTTGCTTCTGACATGTTGCGAAAAGCTACAACTGAAATGCAAAATGCATGCAGATATATTAAGATTATACGCCCTCTGTTTCAAATC | |||||||||
gi|197970175|gb|FL712776.1|FL712776 CCGA14889.g1 CCGA Panicum virgatum apex + stem (H) Panicum virgatum cDNA clone CCGA14889 3', ATTTGGAACAGA-GGGAGTACT EST sequence (targeted fragment marked with yellow): ATGTCCCATCAGTGCCCAATTGGTAGGAGCCCTCGTACTGATGTACTTCTGAAAGTGGAAAATATTATTCTTGAGGCAGGAGGGTTGTGTTCTCAGGCTAGCTGGACTTTATAAAATAGATAGAGGTGCTCATGTATTTTGGTTGAGGAAAGGAACTTTGGACACACGACCAGATCATATCATCAACCAGATTCATTATGAGGATGCTGCTTCCCTTGCAATAGCGATCATGAAAAAGAGACTCAGGAATCAAATCTTTCTTGGCTGTGACAATAAGCCTCTTTCCAGGTCATTGTGGACTTTCTGGCAAGAAATAATGGACGCTGTCAACAGAAGTGGAAAATTTGACACGAAGTTTGAAGGATTTACTGGTACTGACGGTCCATTGGGCAAGAGGATGGAGAACTCGAAAACTCGGGCTGAGATCGGGTGGGAGCCTAAGTATCCCAGCTTCACTGAATTCCTTGGTCTCAGTAGCTAGCAATATCCTTGCATAGTGTTCAGTTCTTCTGACTCGGTTGAGTAGCAACTGCAACGAAGTCGCATCGAGGTATGAGTTTTGATATGGTCTGAACTGGCGAGGGTGCACATCTGTGTCTGCTCCGTGCTTGTCATCAGTTGGGCATTTTTTTTATTCTAAGACTATTTGAGTTCTCCATAAGACTATGCGTCATATAGCTGCATAGTAGTTTTCAACCTCAGGTTATCAGATATTGTCAACTGCAAGTACTCCCATCTGTCCCAAATTATTAGTCGTTTTGATTTTTCT | |||||||||
gi|198207725|gb|FL919412.1|FL919412 CCGO12376.g1 CCGO Panicum virgatum root (H) Panicum virgatum cDNA clone CCGO12376 3', mRNA s ATTTGGAACAGAGGGAGTACT EST sequence (targeted fragment marked with yellow): GCTGGCACCGTGGTTGATTCAAAAGATTTGCATCCTACCGAGTTTGATTTCTACCTGTGTAGCCATGCTGGCATTCAGGGAACAAGCCGCCCAGCTCATTATCATGTCCTGTGGGATGAGAACAAGTTTACAGCTGATGAGCTGCAGACTCTGACAAACAACCTGTGCTACACGTACGCTAGGTGCACCCGCTCCGTGTCAATTGTGCCTCCGGCATACTATGCTCATTTGGCTGCCTTCCGAGCTCGCTTCTACATGGAACCAGATACTTCTGACAGCGGGTCAATGGCAAGTGGTGCCCGTGGCCCTCCACCAGGCGGGGCACGCAGCAGCAGGGCTGCAGGGAGTGTCGCCGTTAGGCCCCTGCCCGCCCTCAAGGAAAATGTGAAGCGCGTCATGTTTTACTGCTGAGATGCTGTGCAGCCTCCACCAAGGAGTACCCTGGAGTACTCCATGTACCCCCACCATTTCAGTGTTACTGTTGGGCACTGTCGTTATGCATTTAGACTAGCCCAGTAATCTGTCTGTTTCAAGTACCTGTACTGTGTCGGTGATGCTGTGAACTCTGCTGCCATGGGAACTTTGTTTTACTGTTTGAAGTGAACTATTTGTTGCGAGTTGTAGCCAGCCACACGAAAGACTGGTATGTATTGACGAACCATTGTTCTGCGAGGCTTGCTTGTGAACTATTTGATGTAAGTTGTAGCCAGTCACTCTTTAATACTGATATGGCAGCTTGTTTCTTAATTACTT | |||||||||
gi|198096208|gb|FL820395.1|FL820395 CCGG17292.g1 CCGG Panicum virgatum late flowering buds + seed development (H) Panicum virgat ATTTGGAACAGAGGGAGTACT EST sequence (targeted fragment marked with yellow): ATCTCGATAGCTAAACTATAAACTTTACTGAAACTACTATTGTACTATATCATTCTTTCATGACTCTCTAGTCTCTTTTTCATGTGTCGCCACAGTTCTAAGCTGCAAAGATTAATGGTTAATTGTTTTTACATGTAGAACAAAGATGGTTCCTTTTCAACGTACGAATGTGAAAGAACTTATTCCTGGTTAGAGGTAAGTTTTGTATATTACGTTGCAACATTACAGCAGAGCATCTTACTCTCTAACCACTATGCTTTTCTTTTTCTTCTGTGGAGAACAACTGATCGATGCCTACTTTGAACAGCTAATGCCTTTCCTGATTTCGTTCTCGATTGTTCCCTCCATAGGATGTTGTAACTTGTCAACGTAACGTAACTAATCAATTCAGTCACCTATTCGGTCATGGTCAGTCTAGACTTTGATTCTGTAAGCTGCCAATACTCAACAGACCACAACTGTTATACATTTATATGTTACGTCCATATATAATAGGGATCTAGTTTTTTCAAGGTAATGTATAGTACTTCATGTTATTAATGGCACTGGTTAATTGATTTATTCTCTCTCCCTTGCTTCTCTCTCTATCTCTTCCTATCTGCTTGTCCCGTCTTCTCTCTCTGTGCGCTGGGCCACATGCCAGCAACGGTTGTCCACATCATGGTGAGGAGTAGTGATTAGGGAATCCCAGGCCGGGAATGTAAGTAGGTATAGGAATGTACTACCTCTATTCCAAATTATAGCTCGTTTGACTTTTTAAACTTC | |||||||||
gi|197978681|gb|FL718366.1|FL718366 CCGB4312.b1 CCGB Panicum virgatum apex + stem (L) Panicum virgatum cDNA clone CCGB4312 5', m ATTTGGAACAGAGGGAGTACT EST sequence (targeted fragment marked with yellow): GATAAACAAAAAAAATATTACAAGTTTTTATGCCTTGCATATCGAACTGTTCAGCCAATAATTTTTCTTAGACTTTTAATGAATAGTCGTTGGCTCCACCCTTCGTCAGTGAACCAAATCCCTCTATGATGGCCGACGGTGTTAATGTTTCAGTTCCTCGTCTGAACCCTGACCATACAACTTCCTCTGTTCCAAATTTAGATCGTTTTGGTATTTCTGAATACATAAATTTTGCTATGTAATAGTGTATGTCTAGGTGCATAGTAAAATTTATATACCTAGAGAAGCGAAAACTAGTTTGGAATGGAGGGAATATATATCTACCATATTTTGGTTATACTGCATACTTAAGAAAGTCTTGACTCCTCTGTCCATTGCATTTACTTTCATACAGGTTATGTGTGCTGCGTGCGCTAACTATGCTCTTCAGATGCAGATCAGTCTACAACAGGTGCTTTTTATCAGATTTTATGCCATTATGAAGATTGATTAGCATCTTGCTTTTGTTTGCCCTGTTCAAATTAGCCCCAAATTTTCCCATTTATTCAAGTTGTGAGTAAAATTTATTGTACCACAGATGCTTCACAAATTCTATATCTCGCTTAAATTGTTGGGCAACA | |||||||||
gi|198351827|gb|GD021088.1|GD021088 CCHZ9386.g1 CCHZ Panicum virgatum abiotic and biotic stress treatments (N) Panicum virgatum ATTTGGAACAGAGGGAGTACT EST sequence (targeted fragment marked with yellow): CGTGCCCAATGTTTTCTTTTTACAGATAAATCTTAAAGCTTGTTTTGCTGACTGACTTGTCTGTCTCTTGCTTTTTCCTGATAGCCAGAGCCAAGTGAGATGAAGGCAATAGCTGCTGAAGGGGTTATTACTTGTCTCGTCTGCAAGATGGAATAGAATCCCTTGAGCAAGGATATGAAAGGAGTGGCGGAGCAGTGGAGCTTCGTCCCCCATGTTGTCAACGAACTGTTGAAACTGGATGAAGCGGAAAAGATGCATCTCTGACAAAAAAACAACTCTCGCAACTAGCAATCAAATGTAAGAAGATTTATCAGGCTGAGTTTGCGTGCATGGACAGCGACGACAAGAAGGGGAAGAAGCATCAAAGCGGCTCGCCTGTAACCGAGCGGCGGAGGAAAACTTAAATCAGGTGATGATCACTACGACAGTGATGACACGGTAGAAATGACGGAGGAAGAGATAGATCTCGCCTGCAGACAACTCCCTGGGCTGTGCGAATGATACTGAACTAGGTTAGCTGAGGAAAGTGTGCCCTTCCTTTAGAACAGGAGAGCAAGGATGGTGGATGGCAACCTCCAATCTTTTCCAGCTGGCAGCTGCCACCCAAATATACTGTTGTCTGAATTTGGTAGGTACTCCCTCTGTTCCAAAATAAGTGCATTTTTTTTACTTTCAGGAATCGTGTTTAACCGTTTGTCTTATCGAATTTTTTTATGTAAATCATAAAATAAATAAGTTATTAGTAAAGT | |||||||||
gi|198218938|gb|FL927821.1|FL927821 CCGP2935.g1 CCGP Panicum virgatum root (L) Panicum virgatum cDNA clone CCGP2935 3', mRNA seq ATTTGGAACAGAGGGAGTACT EST sequence (targeted fragment marked with yellow): AAAGGATTATGGGCAGTTCTTTAAACCCTGTGAATATCTAGCTGCTAGAGCTCGTCAGGGTGCATCTCTGGCTGCCAAGGTTGACGGTGCTAAATCGGCTCTAGGGTTTCACTGTTCATTTGCCTTGTCTCGTTTATTAGTTTACATGGAATTCAGACTCATGGAATCTCCAACTTTGAGGAGATGCTGGTGCCAAACCCCACGAGCATCAGGAGCTTGATTGTTACAAATTACAATTGTGTAGTTGCAAAAGCCACGCAGGGAATAGTACTGGAATGGAATAATAGGGAGGTCTAGTGATTGTATGGGCCTTTCTGGAACTGCTGTGGACCCGTCGCAGTAGTTTGTGAGATATTGTGCGCTTTCTGTTCAATTGAGGTCTGCATAGAACAAGTGATGTCCTCAGTTCAGCTGCTTTGTAACATGTACGTGTCAGCGTACTGCTTGGTTTAAATTTTTTTCGTTGAAATTGGTCTAAAATTGTACTCCCTCTGTTCAAAATTATAATTTGTTTGATCTTTTT | |||||||||
gi|198229765|gb|FL947121.1|FL947121 CCGP14936.g1 CCGP Panicum virgatum root (L) Panicum virgatum cDNA clone CCGP14936 3', mRNA s ATTTGGAACAGAGGGAGTACT EST sequence (targeted fragment marked with yellow): GCAACTTTAACCGTTCCAAACCAATTCATTATTGATACTACGCAGAGGGCATAAAACCATAGAAAATAAAGGATCCCAAATGTAACCACAGATAAAGATAGTCAGATACGATGCCACACCCAGCAATCACTGCACTTGAGTTTACTACAGCAAAAGCCAGCTCAAGCTAGGGTCAATGTCTCGGTACCAATCCTTTGTTGCGATACACGCCTTTTTCGATTTAAGTTTTGAGATACAGTTGCTCCCTCTGTTCCAAGATCGGCCTTCTTTGGGAAGCTACTTGGGGCCGACATCCTTCAGCGCGCAGATCTGCTCCTCCCCCATTGCAGACTGGACAGTCACCACAAGGTCCTTCCCGCTGTCAAATCCTTCCTTGATCTGGCCCAGGAGAGTCTCATCAGTTGGAAGTCTAAGATCATCCTTGGTGTTGCCATCAGAAGTAAGAAGGCTCACAAATCCATCCTCAGATATGTCAATCAGCTGATACTCAGTGCGGTTCACATGTGGCACATCACAATTATGGGAAGATGGGACAATATCTTCAAGCTTTTTCCCATTGAATATGTCGATGGCAACAAAGTGGCATTTAGCATGACCGTGCTTACCAGTCTTTGAGGTAGAAACCTCCACCACCTTGCAGGGGCGGCCCTTGATGACGATGAATCCGTTCTTGCGGATGGTACCGGCCTGCT | |||||||||
gi|198360563|gb|GD024142.1|GD024142 CCHZ11534.g1 CCHZ Panicum virgatum abiotic and biotic stress treatments (N) Panicum virgatum ATTTGGAACAGAGGGAGTACT EST sequence (targeted fragment marked with yellow): CCTTGATAGCTGAATGTTCAAGCTCTCCAGACGTTAATACTAGGAAAGCCCTAGCTAATGCATTGGCTACAGCTCCATCTATGTGGACTCTGGGGAACGCTGGCATGGGTGCACTTCAGAGATTGGCTCAAGATCCCAACTATGCTGTTGCTAGGGCTGCATCAAGAGCCATTGATGAACTCAAAAAGCAGTGGGAACTTGAAGAAGGCGACAGCCTGAGGTTTGTAATGAACCAAGATTTGGTTTCTGAGGGAACTGATGATGAAAGTTCAGCAGCAGACGACACAACGTGAGGTGCAAACAAGATGAAAAATTTCAGTTCCAAAAGTACCATGTACCAAAGCATAACAAAACATCATGAGCTGCACATAAGGCATTCCAGTGTGAGCTTTAGGACTGAAGATCAGATAGACATGTAAGGAAATCTCACATATACTTAGTCGAAGGGGGAAAAAAAACAATCATGTGCTCTGCGAGCAGAATTCATGTCTAGGACAAAGTAATTTCAGGGAACAGCGTAAATAGGAGAAGTCTGTTCCCTTTGGACATTGTTTTCGTATATGAAAGCAAAAGGTTACTTCCTCTGTTCCAAATTATAGGTCGTTTAATTTTTTTTAACATCAAATTTGACCAAAATTTGTGTAAATATTGTAAAATTTAAGTCAGTTTTTGAGGAATTTGTATTGATAAAGCAAGCTATAACAAAGAAAGTGATATTCTGCATAAG | |||||||||
gi|169704780|gb|FE634237.1|FE634237 CBYY12025.b1 CBYY Panicum virgatum Kanlow crown Panicum virgatum cDNA clone CBYY12025 5', mR ATTTGGAACAGAGGGAGTACT EST sequence (targeted fragment marked with yellow): CATTTCCGACTACTCCTTCTGTTCCGAGGACCCTGAGCAAGACCTTCGCACCAAGAACTCTGTCCTTCGTCTTGCCTCGGCGCTCCCCTCTGGTCCCGAGATTTTCGACGAGACAGTCATGTTCCAGGATCCTGACACCGTGGCCTTGAAAGAGGACTTCCGCAACCGGTTCAGGAATGTAAGCCGAATCATGGACTGCGTTGGCTGTGACAAGTGCCGTCTTTGGGGTAAGCTCCAGACCAACGGCTACGGAACAGCGCTCAAGGTGCTTTTTGAGTTTGACGAGCACGATTCCTCCAAGGACCCGCCGCTTCGCCGCACCGAGCTCGTCGCCCTCGTCAACACCATGAACCGTCTTTCCCACTCTCTCTCCGCGATCAAAGAGTTCCGCCGTATGATTGACGAGCGAGAAGGCGTGGCCAAGGGCGCTGCATCTGCGGTCCCCAAGACCGACTCGGGCGTCTTGAAAACCAAGCTCGCGCTCGAAGAAGCCGAGGACACGAAACCCATCAACGTGCTTACCGGCGATGAAGAAATTCCTTCCTTCCAACGCGATTGGGATACAAGAAACATGTCGGCGTGGGATGAAGTCAAGGCAGAATTTAACCTCGTGAAACGCACCGTTTACTATATACTGTACCAGTGGACCCAGGTTCCAGGCCGATTTACAAAGATCTTGATCCTTGAGATGCGCCGTGCGTATAACTGGTGGATGGGCTTTGTTCCCGGTCCTAAATCTTGGGAAATTCGTATTCCCACTCGT | |||||||||
gi|304473395|gb|HO277754.1|HO277754 CCTZ4969.g1 CCTZ Panicum virgatum Pathfinder normalized leaf Panicum virgatum cDNA clone CCT ATTTGGAACAGAGGGAGTACT EST sequence (targeted fragment marked with yellow): CGAGTTCATTCCAAATCCACATTTTCCACCGCTAAAGTTTGAGAGATTGCCTGTCCACATTACCGTTGGGAATTTGCATTCCCTCATCTGGTTGGGTCCCGTGGAAGGCTCTTCCTAGTTGTTCAGATTCAAGATTCTCTCTCCAGTATTGCTCTGTACAAAATGATTTCTCGAGGCTTGCATGGTCTTGGGTGGATGGTCTCTATGACCAGGTATTCTTCTTGGGTAGACTACATTTCACAGCATCATACTCTGCTTGGGAGCTTGGGGTGAAGCAAGGGAATGTATATTACCTTTTTGAGGATGAAGTGTATGGTGAGGATGGTGAGGTTGAACTGCTGAATGTTTTCTTTCCTGGAGATAAATATATGCCCAGCTCCAATTACTGTCATGGGTCCATAGATGAATTGCCGGCTTCCTTGTTGGGCATACACAATGTTCTAACTAAAGCTTGTGGTTTTTCCATAGGCACTGGTTAGAAGTTTATGACAGTTTGACGGGGGAAACATCCTGCCTCTGTAGGTTTGCCGATCTGAATTCCAATTTACTCTCTCTGTTCCAAAAAACTAAGTTTCTAGTTTGTGTTATGTCAAACCATCTCAAGTTCGACCAACTTTATAGAGAAGAATACAAACATTTGATATATATTTCGTGATGTATCAACTATTTTCTGTAAGCTTGGTCAAACCGCTGCTGCAATAATGGTCTTACCAATTGGGTAAGTAAATTTTGCATGTCATGAATGTAATATTTACATCGCAACTTCAAATGTGAATTCCCATATGGCTCTGTT | |||||||||
gi|198140707|gb|FL859546.1|FL859546 CCGI5921.g1 CCGI Panicum virgatum etiolated seedlings (H) Panicum virgatum cDNA clone CCGI59 ATTTGGAACAGAGGGAGTACT EST sequence (targeted fragment marked with yellow): CCGCGATGTTCGCGCGGCGCGGGTGCACGGTGATCGCGTGCGGCGTGGGGGCGCGGCTCGACCCCCCCGCGGAGGAGGCCCTGGCGCGGGTCAAGGGCGCCTGCGCGGAGCACGGCGCGCGGCTCGCCGCGGAGAGCGCGCCGCTCGCCGTGGCGCGCGACGGCGCGGTGTCCGCGGGCGTCTGGCTGTCCGCCGGGCGCACCCGGCCGCGGCAGTTCACGTACCAGCGGATGGGCGCGGACTTCTTCTCGCCGGGCCACTGGCCGCTGTTCGTGCAGTTCGTGCGCGCGCTGGAGTGCCCCGAGGAGGCCCACGCGGACGACCTTCCCGGCGGCGAGCGGCTCCCCCGTACCGTCCGCCTCCGCCGCGCCCGAAGATGCCAGGGCAGTGCAGACCGTGAATGGACACGGCATTAATCGAACTCCTCGATGTACAAATGCAGTATAGCACTACTGCAATGGTAGTTGTATTTTAGTAGTGCTCCATTCAGTAGGATTAAGCAGTAAGTACATTTTAGCTGCGAGATGAGATGAGTTGATCCTTTGTATCAGTGGGAACCAAGAGCAGGAGTGTACCACTATATTGTACTCCCTCTGTTTTAAATTATAAGTCGTTTGATTTTTTTT | |||||||||
gi|198061948|gb|FL791915.1|FL791915 CCGF17278.g1 CCGF Panicum virgatum early floral buds + reproductive tissue (L) Panicum virga ATTTGGAACAGAGGGAGTACT EST sequence (targeted fragment marked with yellow): AAGGATGCTGGTAAGCCAGTATTCGAGGGAGAACTGGCTTCTGGGTATTTGTGATTGCAAACAGCATGTCGTTCTATCTCTCCACAACCCACGATATTTCTGTTTGTGTTTGCCAGACTAACAAGGCATCGCCGGTTTTACCTCATTTTGTCTGCTGCACTGGTGTTTGGAGCAGTTCTGTCCATGGTAACGGCATTTGCGACAGTAGTAGGGCTAACATTAGACCCTGCAAACAGCTGGGACGAGTCTATTCTTATTTGGCTGGTGTCAAATTTAGCATTTCCGATATGTCTGCGGGTTGCAATGCAGTTGTGGATGAGCAAACATCGCTGGCAGGACATATCTAAAGTTGTAGCTCAAGCCATCCTGCTGATTTATGTGGTCCGAGCTTTGATCATCCCCATGCAATCCCTGGTTAAAAGCATTCTGCCCAGGAGACAAGAACCCTGCAGCTGGCCTGGATGTGTGAGACAAGGTGATGCGGTTTTCTCATACCCTACTTGAGGTTTGTAAAATCTGCACATCTGTGAAATTGTTCAGGGCATTTTGCTTTTCTCAGCTAGAGTTATTGGGTCTGTCAGAAAGATCTCTTCAATAATACCATTTGTATAGGAGTAAGTGATGTTGAACTAACAGACAGCATGCAAAAGCAGTTCGGTATTTCCTCTGTACCAAATTTTGTTTTTCATCTCGCATTGATGTATTAAAACTGGTTGATGGTGTAATGGATGCAATGTTGCACTTTTTCCCCC | |||||||||
gi|198312638|gb|FL978160.1|FL978160 CCHY14282.b1 CCHY Panicum virgatum callus (N) Panicum virgatum cDNA clone CCHY14282 5', mRNA ATTTGGAACAGAGGGAGTACT EST sequence (targeted fragment marked with yellow): ACCAGCGCGAGCGACCGCTTTCCTATCCCTGATTGCAACTTCCTGGAGGAGACCAAGTATGCCAGGGAATCGGCGGGGCGGCGGCAACTGCCCAACTGACGATTTTTTCTCCGCAAAGCCACACAATGCAGGGGCGGCAGGTGTATCAGGAGCGAGCAGAAAACCACAGAGGGAGCGAGGGGTGGAGTGGTCTGTGATGCTTGGGACCAGTATCTTGGGATGGAGCATACTGACACTGCACTCTACATGGCCTATACAGTGAATCAGAGGTTTCAGCAGTAAGCAAAGCCGTGTTGCCGTGATCACAGCCTCACAGATAAGTGATGACGCCGATTTCTGTAGAAAGTGGGCAAAGGGGGAATCAGTCATGGTGTTGCCTGATACGTGGTCAGAATATATTGTAGCTTGCACAGTCGCCAGCCAACGAGAACCATGGTCTGAATGTTGCCAAGCATCCGGACAAGCTTTTCTTGATTGAGTTGAAAAGCTTCCAGTGGAGAAACAGATGAGTAAGAGCCATTTTATGGTTGCTGTGCACTGGCGCGTGATGCCCTATGGAATTTGTTATGGAATATTAGATAGTACCCCCTCTGTTTTAAAATGTCCTAAACGTCATATATTAAAACAAAATGAGATTTTTGGGA | |||||||||