miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse




mature miRNA: CCTCAAAAGATTCGTCTTGCG
species: Panicum virgatum
database: miRNEST
The numbers on the right side of the alignments show a score calculated for them.
When calculating the score, a mismatch is given a score of 1, bulge: 2, and wobble: 0.5.

Predicted miRNA targets
gi|197975012|gb|FL721097.1|FL721097 CCGB5772.b1 CCGB Panicum virgatum apex + stem (L) Panicum virgatum cDNA clone CCGB5772 5', m

CCTCAAAAGATTCGTCTTGCG
||||||||||||||||.|
CGAGTTTTCTAAGCAGAGCAG

EST sequence (targeted fragment marked with yellow):
TACCATCGCCGGCCCACAACAGCCATGGCGACGACAAGGATGCCGTGGAGGAGGACGAAGACGAGTGGGAGGATGGCAGGAGGAAGTTTGGGGCCGCGGATACCTTCAAGCTCCCTGACGAGATCGACATTGCTCACCTCAGTTGAGCTTGGCTTCTGCATTGGCCTGTGCATTCTGATCATAGGAATTGATTTGCTATCTGATTGCCTCAGCCCTGTATAAGGGGCCGTTTAGTTCCCAAAAATTTTCGCCCAAAAATTTTCACCTCCCCTTTGAACACATGTATGAAGCACTAAATGTAATTAAATAACAAAATTAATTACACAGTTTAGATGTACACGACGAGACGAATCTTTTGAGCCT



gi|304504184|gb|HO302530.1|HO302530 CFCB2151.g1 CFCB Panicum virgatum WS4U normalized leaf Panicum virgatum cDNA clone CFCB2151

CCTCAAAAGATTCGTCTTGCG
||||||||||||||||.||.
CGAGTTTTCTAAGCAGAGCGT

EST sequence (targeted fragment marked with yellow):
TACATGCATGGAGTACTAAATGTAGATGAAATTAAAAAGTAATTGCACAGTTTTTGTTGTACTTGCGAGACGAATCTTTTGAGCCTAATTAGTCAAATATTTGGACAATAATTCACAAATACAAACGAAACGCTACAGTGTGCTACAGCGCTGTAACAGTAATTTGGCACCTCCCAAATTGGCCAACTAAACAAGGCCTCGCTTTCTTATGTCAATATCTAATCAACACCGGATATTTTGCACTTCGCCTTGTCATCAAGCACACAAATCTGTCCTTTACCTTCCTGCCAAATCTATCATTATCCTTAACTATATAAACAATCATAAGTGATCATCGTAATGGTGGGGCCATAACGTGTCCGTTCACTCTCGATGCAGGAACGCGAAATCGAAGTCCTGCCCGTTCTGCCGCGCCTGCCTTGAGGAGGTGAAGCCGGGCAGCCTGTGGGTGTTCACCGACGACAGCGACGTTGTGGATATGGATACCTTGACCAGGGAGAACATCAGGCGGCTCTTCATGTACATAAACAAGCTGCCGCTCGTAGTCCTACATGTAGCTGACCTTGACATTTACGAGTACCGTATCAAGTAATTGAACTGATCCTTGTTCGTACCT



gi|198217834|gb|FL929967.1|FL929967 CCGP4151.b1 CCGP Panicum virgatum root (L) Panicum virgatum cDNA clone CCGP4151 5', mRNA seq

CCTCAAAAGATTCGTCTTGCG
| ||||||||||| ||| |||
GTAGTTTTCTAAGGAGACCGC

EST sequence (targeted fragment marked with yellow):
GAGCTACCCACATTGTTCCTGTTGCTGATGGTTATGTCATTGGGAGCAGTATCAGATCTATTCCGCTTACAGGCAAGGATGTTACCCAGTTTGTCCACCAACTTATGAAGGAAAGAGGTGAGAACATTCCGCCAGAGGAATCTTTTGATGTAGCGAGGAGGGTTAAAGAAATGTACTGCTATACTTCTTCAGACATTGTGAAGGAATTCAATAAGCATGACAGAGAGCCCTCGAAGTACATTAAACACTGGACTGGCATCAAACCAAAAACTGGTGCAAAATACACGTGCGACATTGGATATGAACGATTCTTGGGGCCTGAGATATTCTTCAACCCAGAGATTTACAACAGTGACTTCACCACTCCTTTACAAGTTGTTATTGACAAGTGCATCCAATCAGCCCCAATCGACACAAGAAGAGCTCTGTATAAAAATATTGTCTTGTCTGGAGGATCGACTATGTTTAAGGATTTCCATCGGAGATTACAACGGGACCTAAAAAAGATAGTGGATGCACGGGTCCGTGCATCTAATACTCGGCTTATCAGTGGAGATCCTAAGGCACAACCTATAGAAGTGAATGTGGTCAGTCATCCGATTCAGCGATATGCAGTATGGTTTGGCGGTTCTGTGCTTGCTTCCACAGCAGAGTTCTACGAGGCTTGCCACACAAAAAGCAGA



gi|169674412|gb|FE604044.1|FE604044 CBYX5236.b1 CBYX Panicum virgatum Kanlow callus Panicum virgatum cDNA clone CBYX5236 5', mRN

CCTCAAAAGATTCGTCTTGCG
||||||||||||||||.||.
CGAGTTTTCTAAGCAGAGCGT

EST sequence (targeted fragment marked with yellow):
CTTCTTCCTCCACCGAGCGCGGAGCTGGCATCGAGTGTGTGGGTGTGGCGTCCCGGCCGACGGCGAAGATGACCCCTTGCCCCTGGTGCGCTGGCCGGAGAAGAAGTGCTCCATGGCGGCGGCGGTGGCAGGAGGGGCGGCGTCGGCGTCGGCTGGCCGGGATCAGCTAGCTGTGCGTACCTGCGCGAGTGGGCGTGATGCGTATATTGCCCAAGAGTGACAAAGGTACGTAGAGAGCTGGATCGTTCGCTGACGGTTCTCGTCTCCCACACCGCCGTTGGCGCTGCGTCGTCGCCGCCGGAGGTGGCTGCACCGCGCGCGCCGCCGATCCGCCGGTGAGCGACGGACGGCTCCGAGCCAAGCTGGCGCCCGGCGGCGGCCGTACCCGTAGTGGTTCTTCATGGTGCTCCTGCTCCGGCCAGCGGCCCAGCGCCATGGATCTCCGTGCCACCACCTCTGCTTCCTGCTCGGTGCCTGCACGCATGCAGGCTTGCCGCCGATCCACAATCTTCGACGGCGCGAGCATGGGGACGGGAGCCGGCCGGGATTGGTCTTCCGGGGCTGCGGTGGCTGTGTTCACTCCCCTCCCATTCCTCCAAATTTTTCATCACATCAAAATAACATCGAAGCATTAAATATAATAAATGATTTATACATAAATATATGAAGTATTAAATATAGATAAATAAAAAAATTAATTGCATAGTTTTGATGTATGTTGCGAGACGAATCTTTTGAGCTTAGTTAATTTTTATAAATATGAAGA



gi|169686400|gb|FE615563.1|FE615563 CBYX12819.g1 CBYX Panicum virgatum Kanlow callus Panicum virgatum cDNA clone CBYX12819 3', m

CCTCAAAAGATTCGTCTTGCG
||.|||||.||||.| ||||.
GGGGTTTTTTAAGTATAACGT

EST sequence (targeted fragment marked with yellow):
TCCAACAGAGGTGCCCAAAAACTTGCACGCATCCGTGAGAATAGTAATTTCTTCAGGTCAGAGCTCAAGAAGATGGGTTTCGAGGTTCTTGGTGACAATGACTCTCCTGTCATGCCCATAATGCTATACAATCCGGCTAAGATTCCTGCATTTTCTAGGGAGTGCCTTAGGCAAAAAGGTTGCTGTTGTTACTGTGGCATTCCCTGCGACACCTCTTCTTCTTGCAAGAGCTCGTATCTGCATTTCTGCTTCACACACTAGGGAGGACCTGGTGAAAGCCCTTGATGTTATCAGCAGAGTTGGTGATCTTGTCGGCATCAAATACTTCCCTGCAGAACCCCCAAAGATAGCTGAAGATGGTCATGATAAACTGGAGTAGGGATGAACGTTGAGTTAGCCCATGAATGATTGAAGTTGTTAGAATTCCTCGGGGAGTTATCAACAAATCATTACAGAAACAAGCCCCCATTGAGCAGTTTCATTGGGATTTTGTCAATACTCAAGAGTCCAGGATCGTTCGTATTAGCTGACTATTGTTTGTTGATTGTACAACTATCCTTCCAAATCTGTATAGCTGGTTGAAGTTCAGTTGTTCTGTTGTTAATCCATTCTCGATATGTAATACAATTAGATGCAATATGAATTTTTTGGGGAAC



gi|304542487|gb|HO342981.1|HO342981 CFHF3468.g1 CFHF Panicum virgatum U601 normalized leaf Panicum virgatum cDNA clone CFHF3468

CCTCAAAAGATTCGTCTTGCG
||||||||||||||||.|
CGAGTTTTCTAAGCAGAGCAG

EST sequence (targeted fragment marked with yellow):
CGCCGAAAGCGGTCTGGGGTTCAGCTGTCTAGAAAAACTCCTGTAGTTGAATTTCTGAGAGGCACTCGTGATCAGTAAGATGCTTGATATCATATTTTGGTATCCACGACCCTTTTCTTGCAGGAATTTGTTACTTCTGGTCTTACATGCCCCCCAGATGCATCCTTTTGTGATGCCACGACTTGGATTCTCAACTTAGCGCTTATTTTCAGCACTTCCCTTTCTGTTGTTTTTTTGTTTGAAAACCCTTTCTGTTGTTTGAATCTCGGAATCTCGGTACTTTGCATGTCACCCATCTTCATGCCTTCGGTGCTAAAACTGGGGAAAGAGACGGTTCAGAATAAAAATAAAGTAGGAGAATGTCAAGACAAAGTGGGGCTGTGTTTAGTTCCAAAATTTCTCTCTCCAAACTTTACTATTCATCTATCACATCAAATCTTTTGCCTCATGCATGGAGCATTAAATGTAGGTAAATAAAAAAAACTAATTGCATAGTTTTGATGTACACGACGAGACGAATCTTTTGAGCCTAGTTAGGTCATGGTAGGACAACAATTACAACAAACAAACGAAAAGTACTACAGTGTACTACAATGTTCGATGTGACCCTTTTTACCACTATTTTACGGATCTAAACACAGCCTGGGTCCACTTTCTTTTCAACATGAACATGGAAGTAGGTTGCTAGGACAGCGACATTTGTGAATTTGTGATAATTATGGATTTTCCACGTTTTTGCTACACCATAAAATTTCATTGGTTCAACCCTATATCACCTGG



gi|197958681|gb|FL699530.1|FL699530 CCGA6351.g1 CCGA Panicum virgatum apex + stem (H) Panicum virgatum cDNA clone CCGA6351 3', m

CCTCAAAAGATTCGTCTTGCG
||||||||||||.|||.||
CGAGTTTTCTAAGTAGAGCGG

EST sequence (targeted fragment marked with yellow):
GGCGCTGTCCGGTCGAGGTCGGCGTCGACCAAGACGGCCCGGGGCGCCGCTGTTCCCGGTGACGCTGAAGAAGGACCAGGTCGTGGAGGTGCCGGCGGTGGCTGTGCCGGCCAAGAAGGCGGGGCAGCAGCGGGTGCTCGTGATCCAGGGCATCGAGTACGACCCCAGGGGCGAGAACAAGTTCGACGTGGCCATCAACGTGCCCAAGGGTTCGGCCCTGGAGGTGGGCCCGCAGAACTTCGAGTTCGCCGGCAGCTTTGCCGTCGTGCCGAGCTCCAACGCGGCTGGCGGGAAGCTCAAGGGGGGCATCACGCTCTCCATCGACGACGTGCTGAAGGACATCAAGGCCGCCGACGACAGCACCGTCGACGTCATCATCGTGCCGCGCACGGAAGGGGAGATCAAGATCAACTCTTCCCCGACGATCCAGAGCTAGATCGATTGATCTACCCTCGATCTCACCGTACTGGGCCATCCATCGTCCCGTGCAGTGGCCATATTGGTGTCCGGCCGCAAGAATAAAGTGAACATGTCGTGTCGTGTGCTTGTAGCATTTCGGCCGCGTTTAGTTCCAAAAAATTTTCACCTCGAAATTTGTGCCTCCCCTTTTGGACAGTGTATGGAGTACTAAATCTAGTTAAACAACAAAACTAATTGCACAGTTTGGATGTACACGGCGAGATGAATCTTTTGAGCCTAATTAGTGCATGATTAGCCAT



gi|197995149|gb|FL734717.1|FL734717 CCGB13810.b1 CCGB Panicum virgatum apex + stem (L) Panicum virgatum cDNA clone CCGB13810 5',

CCTCAAAAGATTCGTCTTGCG
||||||||.||||||||.|||
GGAGTTTTTTAAGCAGAGCGC

EST sequence (targeted fragment marked with yellow):
CCCGAACCAAAAATTTTTGGATGTCAAATCGAGGGTTTGACCAGACGTCGGAAGGGCTTTTTGGACATTAATTAAAAAACTAATTTCAGAACTCACCTGGAAACCGCGAGACGAATTTTTTGAGGCCTTTGACCGCATCATTAGCCTAAGTTGCACGGATACGGATACGTGTATCGGTATCGGAAGGATACGGATACGCGGATACGACAATTTTCTAAAAAACCCGATACGCGGATACGTTTACTATTTAAATAAAATAAAATAATAATAATAATGCAGCGCCACAAAGTATTTCCTCCACCAATAATAATAATGGCTTCTCCAGAATGGAGCCAATTCATGTTAGTACCTAGGTATTTCATAAGAAATATGGCACCAGCATATCAACTACTAACTGCGGGTCCCACATATCATACACTTCATTTTTTATCCACCCACTCCCCCCACCCCGTCGCACTCCACTCTCTCTCTCCTCCCTTCACTCTCCCCAGGCCGGCGGCGGCGCTCCTCCGGCCTCCCTCGCCGGCACCGGGCTAGACGGCGGCAGGCGCGGCAGGTGCGGCGGGCGGCCACCGGATCTGGTCGACGGCGGGGGCGCGGCGGCCCTCCTCCCTCGTCGCGCTGGATCCCCCTCCCTCCTCCCTGCTCCCTCCCTCGGCGGCCAT



gi|198116126|gb|FL843985.1|FL843985 CCGH23799.g1 CCGH Panicum virgatum late flowering buds + seed development (L) Panicum virgat

CCTCAAAAGATTCGTCTTGCG
||||||||||||||||.||.
CGAGTTTTCTAAGCAGAGCGT

EST sequence (targeted fragment marked with yellow):
CAGACGCTCACGAGAGCGGCGCCAGCATTCCGGCGATCCTGGGCCGCGAGCTGCGGGGGTTCATCGCCAGGGCCGGCAACATCTTCCGGTCGGCGGGGGGTGGCGCCTGGCGCGCCGCGAACGCCACCGCGTCCGCGTCCGCCGCCGAGGCGAAGAACCTGCGCGCCGTGGCGGCGGCCCGGCGGAGGCGCCCCGCCGCCCGGAAGTCCGCGGCCGGCTGCGTGAGCGCCGCGGCGTGCCGGAAGAGGCGCGTGATCTGCGCCAAGCGGTGCTACCGTGCCTCGCGCGCCGCCGCCGGCCTCACCCACGTCCCCTCCCGGTGCGTCGTCAAGTGCAGGAAGTGCGTGCCCACCTGCTAGCAAGCTCTGCTAGGTCGCCGCTGGCCCCCGATCCGATGTGATCCGCAAAACATGTTGGGTGTGTTTAGATACCCCAAACTCCTCCTAACTTTCCAAACTTTCCATCACATCGAAATCATATCGAAACATTAAATATAACAAATGACTTATGCATGGAGTACTAAATGTAGGTAAATAAAAAAACTAATTGCATAGTTTTGATGTACGTTGCGAGACGAATCTTTTGAGCCTAATTAGGTCATGGTAGGACAATATTTACCACAAACAAACGAAAAGTGTTACAGTGTGTTACAGTGTCCGATGCGACTTTTTCTACCAACTTTTCTTGGATCTAAACACACCCGTTCTT



gi|169701256|gb|FE627739.1|FE627739 CBYY7476.g1 CBYY Panicum virgatum Kanlow crown Panicum virgatum cDNA clone CBYY7476 3', mRNA

CCTCAAAAGATTCGTCTTGCG
|| |||||||||||||.||.
CGAATTTTCTAAGCAGAGCGT

EST sequence (targeted fragment marked with yellow):
TCGAATATTTCAACAAATATATGAAGTATTAAATGTAGTTAAACAAAATAACTAATTATACAATTTATCTATAATTTGCGAGACGAATCTTTTAAGCCTAGTTAATTTATGACAGAATAATAATTACTAAATTCAACATCCAAAACTTTACACATTTAAACAAGGCCTTAGTAAGCTTAGATTAGATCCATGGACGTACCTACCAGTTGTGATGGAGTTTGTTTGCGGTAGCTGCTTGTGGTTGTTTTCTGTTGGGTGATAAATACTGTACGTTGGGCTCTCAAGTCATTGCTGCTCTGTATGTAATATTTTGCACTTGATGAGTGGGGAAGTAAAAAAAGGTAGGAATTTGTTTGAAC



gi|304541222|gb|HO339125.1|HO339125 CFHF1222.g1 CFHF Panicum virgatum U601 normalized leaf Panicum virgatum cDNA clone CFHF1222

CCTCAAAAGATTCGTCTTGCG
|||||||.||||||||.||.
CGAGTTTTTTAAGCAGAGCGT

EST sequence (targeted fragment marked with yellow):
CACATACAAGAGAACCAGCGGTACAATTGATGCACCAGTACAATTGTCGGAGTTAGCGACTATGATCCAATGCGATGGCCGAACTCAAAATGGCACAACTTGCAAGTACAATGGGATGAGCATAGGTATGGAGAAAGACATGAAAGAGTTAGCCTATGGGATATTTGGAACCCCAGAAAACTCTCTGGTTTTCTCTTGTCCATTGAATTTGAATTGGCAATGCATTCCCAGTTATGGAGTTCCTGGGCTACAAATTGAATCTGTAAATAGGTCATCAATTCCAAGGCACAAGCAAATCCATTTGGTAACTTGCAGCACATGCCAGGATCAGCTCAGAGTTGGCTTCGGCTGTGTTTAGTTCCCCCCAACTCCTCCAAACTTTCCATCACATCAAAACATTAAATATAGCAAATGACTCATGCATGGAGTACTAAATGTAGGTAAATAAAAAAACTAATTGCATAGTTTTGATGTACGTTGCGAGACGAATTTTTTGAGCCTAGTTAGCCTATGTTAGGACAATATTCATCACATACAAACGAAAAGTGCTACAGTACTTTTCGCAAACACTTTTGCATCCTTTTTGCAACTAAACACAGCCTTCGATGCTTAATCAATCTGGCCAGAACCTCGGAAGTCCGCTTGCTCC



gi|169674413|gb|FE604045.1|FE604045 CBYX5236.g1 CBYX Panicum virgatum Kanlow callus Panicum virgatum cDNA clone CBYX5236 3', mRN

CCTCAAAAGATTCGTCTTGCG
||||||||||||||||.||.
CGAGTTTTCTAAGCAGAGCGT

EST sequence (targeted fragment marked with yellow):
TGCCCGAGAAGAAGTGCTCCATGCGCGCGTGCAGAGGGCGGCGTCGGCGTCCGCCTGCCCGGGATCAGCTAGCTGTGCCGTACCTGCGCGAGTGGGCGTGATGCGTATATTGCCCAAGAGTGACAAAGGTACGTAGAGAGCTGGATCGTTCGCTGACGGTTCTCGTCTCCCACACCGCCGTTGGCGCTGCGTCGTCGCCGCCGGAGGTGGCTGCACCGCGCGCGCCGCCGATCCGCCGGTGAGCGACGGACGGCTCCGAGCCAAGCTGGCGCCCGGCGGCGGCCGTACCCGTAGTGGTTCTTCATGGTGCTCCTGCTCCGGCCAGCGGCCCAGCGCCATGGATCTCCGTGCCACCACCTCTGCTTCCTGCTCGGTGCCTGCACGCATGCAGGCTTGCCGCCGATCCACAATCTTCGACGGCGCGAGCATGGGGACGGGAGCCGGCCGGGATTGGTCTTCCGGGGCTGCGGTGGCTGTGTTCACTCCCCTCCCATTCCTCCAAATTTTTCATCACATCAAAATAACATCGAAGCATTAAATATAATAAATGATTTATACATAAATATATGAAGTATTAAATATAGATAAATAAAAAAATTAATTGCATAGTTTTGATGTATGTTGCGAGACGAATCTTTTGAGCTTAGTTAATTTATAAT



gi|304529361|gb|HO322283.1|HO322283 CFHB2865.g1 CFHB Panicum virgatum U418 normalized leaf Panicum virgatum cDNA clone CFHB2865

CCTCAAAAGATTCGTCTTGCG
||||||||||||||||.|
CGAGTTTTCTAAGCAGAGCAG

EST sequence (targeted fragment marked with yellow):
CGGGGTATGAGTCACTAAATGTAATTAAATAACAAAATTAATTACGCAGTTTGGATGTACACGACGAGACGAATCTTTTGAGCCTAATTAGTGCATGATTAGCTATAAGTGCTACAATAACCCACATGTGATAATGATGCGGTCAAAGGCCTCAAAAGATTCGTCTCGTGGTTTCCAAGTAAATTCTGAAATTAGTTTTTTAATTAGTGTCCGAAAAACCCTCCCGACATCTGGTCAACCAGTCGATTTGACACCCAAAAATTTTCGTTTTTGGAACTAAACGCCCCCTTATATGGTTTCCGGCGGTGTTTGGATGAGGGAGTCGGCGTCGCGTTCGTGAAATATGATCGTGTCCTCTCTCTCTTCTTCGCTGCTGTGTGCTCCGGCGGTGTTAGGTCCGTGAGTTTTCGGGAGCTGTCGTCGGTGAAGCTTTCTGTCGCCTCCTCGCGTGACGTCATAATGGTCAGTATGACGTGTCCGTGTGTGACGTCATAATGGTCAGTATGACATGTCCGTCGTCTGCAGAACCAAGTTGGCTCTGCCGATATCACGAAGAACACGATCATATTTTCTGTGTGTAGATGTAGGTCTGCGTATGTGTGTAAGGGTGTGAGTGTGTGGTGCACTTATGTGTATAAGAATAGATACTAAATCTGTACCTACAAAGGGAGGCTTCAAAAAAAATTCTTATCG



gi|169678610|gb|FE606875.1|FE606875 CBYX6984.g1 CBYX Panicum virgatum Kanlow callus Panicum virgatum cDNA clone CBYX6984 3', mRN

CCTCAAAAGATTCGTCTTGCG
||||||||||||||||.||.
CGAGTTTTCTAAGCAGAGCGT

EST sequence (targeted fragment marked with yellow):
GGCGGCGGCGGTGGCAGGAAGGAGCGGCGTCGGCGTCGGCTGCCCGGGATCAGCTAGCTGTGCGTACTGCGCGAGTGGGCGTGATGCGTATATTGCCCAAGAGTGACAAAGGTACGTAGAGAGCTGGATCGTTCGCTGACGGTTCTCGTCTCCCACACCGCCGTTGGCGCTGCGTCGTCGCCGCCGGAGGTGGCTGCACCGCGCGCGCCGCCGATCCGCCGGTGAGCGACGGACGGCTCCGAGCCAAGCTGGCGCCCGGCGGCGGCCGTACCCGTAGTGGTTTTTCATGGTGCTCCTGCTCCGGCCAGCGGCCCAGCGCCATGGATCTCCGTGCCACCACCTCTGCTTCCTGCTCGGTGCCTGCACGCATGCAGGCTTGCCGCCGATCCACAATTTTTGACGGCGCGAGCATGGGGACGGGAGCCGGCCGGGATTGGTCTTCCGGGGCTGCGGTGGCTGTGTTCACTCCCCTCCCATTCCTCCAAATTTTTCATCACATCAAAATAACATCGAAGCATTAAATATAATAAATGATTTATACATAAATATATGAAGTATTAAATATAGATAAATAAAAAAATTAATTGCATAGTTTTGATGTATGTTGCGAGACGAATCTTTTGAGCTTAGTTAATTTATAAT



gi|197977132|gb|FL716336.1|FL716336 CCGB3249.b1 CCGB Panicum virgatum apex + stem (L) Panicum virgatum cDNA clone CCGB3249 5', m

CCTCAAAAGATTCGTCTTGCG
||||||||||||||||.||.
CGAGTTTTCTAAGCAGAGCGT

EST sequence (targeted fragment marked with yellow):
CTCATCTCAAAGGTAAACCTACCTCTGCAATCTCAGTTCTTCACCCTTGCGCGTGCTGAACCACACCCATGGACCATGGTAGAACCCATTTATCTGGGGGCATTGGGGCATTGCGAGCTCCAACTCCATGGAGGTGGGCTTGGGCTATTCCCTGACGTCCGAGGCAGTGGACGCACCCAAATCTTTTGCTATTAGTAGGCCGTCATCAGCAATGGTCAGCGTGGCGTTAAGACGGGGATGTGTGTCTTGTTTTGGCCACTTCTATCGATGCAACATCTCTGTTGCGCATCGTGCAGCTGGCGAGCACGGCTGTGTTTAGTTCCAAAAAACTCCCCCCCAAACTCCAAACTTTCCATCACATCTCTATCACATCAAAACATTAAATATAGCAAATGACTCATGCATGGAGTACTAAATGTAGTTAAATAAAAAAACTAATTACATAGTTTTGATGTACGTTGCGAGACGAATCTTTTGAGCCTAGTTAGGTAATGATAGGACAATATTTGCCACAAACAAACGAAACGTGCTACAGTGCGCTACAGTGACTGATTTGACTTTTCGCATCCACTTTTTACACTCTTTTTACACATCTAAACACACCCGTGCTCTGCTCCCGACGAGGATGTCATCAGCTTTTCGGTGGGCTCGGAGCATGTCAGCCTCTGCATGTCCTTGACGCTAGACTTAGGGTGTGTTTAGATCCCACCCCGTAAACGCAAAAAAGCCGTAAACGCATTAAAGTGAAAAGGAATCTTGCTAATTTGAAGTATTAAACGAAGTCTATTTAGAAACTTTTTGCAT



gi|198133431|gb|FL858416.1|FL858416 CCGI5332.g1 CCGI Panicum virgatum etiolated seedlings (H) Panicum virgatum cDNA clone CCGI53

CCTCAAAAGATTCGTCTTGCG
|||||||||||||||||.| |
GGAGTTTTCTAAGCAGAGCAC

EST sequence (targeted fragment marked with yellow):
CTATATTTGATGAGCTGAATACATCCTTTGATGTTGCTGCTTGCTTCAAGCACGCCAGCCTCTCCAGCTTATAGCTGAGGCATCAGCGGCCTCATCAGCAATGCTATGATGTCCATAGCTCCACTGTAGACATTGTGATTCCCAATATCTTCAAGTTGATCCATAAGAATATGTAGAGGGCGGCTGCTTTATGCACTATGACCAAGCGCTTTTATGGGAATTGGTCAATGGTGCTCATCAACTGGGGATGCAATTTTTGAAGCTATCAACTCACATCGGATTGTGAAGAAGTTGATACCATTGCCAGTAAGCCACCGTATCCTCGAACTTGAAGAATTGGAGGACAACATTTCAAACTTCATACTGAAAAATTTTCACACGTCGGCACGCAAGGATGAAGACCACAAGTTCACACGGGCGACATTCCTGAGTCATAAACATGGAGGATTATTGGAACTGGGGAAAAACCTACAGGTAATGTAGAATGCCTTGGAAACAAACGAGCAACGATTAGTTAGTGAAATTTTTTGGATCAAAAGATCACATTGATTGTTTGACCAGATGTCGAAAGAGCTTTTCGGACACTAATTAAAAAACTAATTTCAGAACTCACTTGGAAACCACGAGACGAATCTTTTGAGGTCTTTGACCGCGTCATTAGCACATGTGGGTTACTGTAGTATTTATGGCTAATCATGTACTAATTAGGCTTAAAAGATTATCTCGTCATGTACATGTACATTCAAACTGTGTAATTAGTTTTGTTATTTAATTACATTTAGTGCTTC



gi|198239290|gb|FL949236.1|FL949236 CCGP16209.b1 CCGP Panicum virgatum root (L) Panicum virgatum cDNA clone CCGP16209 5', mRNA s

CCTCAAAAGATTCGTCTTGCG
|||||||||||||||||.||.
GGAGTTTTCTAAGCAGAGCGT

EST sequence (targeted fragment marked with yellow):
ATTTTGAATTTGAATATTTTTTTTTCTTCTGCTCAGAGATGTGGATTCGGGTCTGGTCTTGTAGGGTGCCTGGACATTGTGGAACTTAGGGGGTGTTTAGTTGATGAAAATTTTTGGTACAAAGGTCACATCAAATGTTTGACCAAATGTCGGGAGAGATTTTCGGGCACTAATTAAAAAACTAATTTCAGAACTCGCTTGGAAACTGCGAGACGAATCTTTTGAGGTCTTTGGCCGCATCATTAGCACATGTGGGTTACTGTAGCACTTATGGCTAATCATGCACTAATTAGGCTCAAAAGATTCGTCTCGTCGTGTACATCTAAACTGTGCAGTTTGTTTTATTTTTTAACTACATTTAATGCTCCATACATGTGTCTAAAGGTGAGGCAAAAATTTTTGGGTGAAAATTTTTGGTAACTAAACGGGCTCTTAGCAATTTTGGATATGAATGCTGTGTTTATGTTACATGCATGAACAATACTTTACCTGACAATAACTTGTGATTGCAGGCTTCTCCTGTCGTGATTGGTGAACGGCAATGTTATGTTGAAGAGAAAAGAACTACTGGTTCTCGTGGCAGTAGCAGAGGAGGAAGGATTGTACCAGGCAGAGGTGGTAACTTCCGAGGCGAAAGGCCTTAGAGGCCGTGGTACTTACAATGGAGGCAGAGGCTACGGAAGGGGCGAGCTCAATTATCGATCCGATTATGGCGGCCGGGGTGGTGGCAGGGGTGGCTCATCACGTGAGATGTTGGCTACCAGCGGGTCGATCACTCTGT



gi|198154433|gb|FL869368.1|FL869368 CCGI11409.b1 CCGI Panicum virgatum etiolated seedlings (H) Panicum virgatum cDNA clone CCGI1

CCTCAAAAGATTCGTCTTGCG
|| |||||||||||||.||.
CGAATTTTCTAAGCAGAGCGT

EST sequence (targeted fragment marked with yellow):
GGGTAAATAAAAAACTAATTGCATAGTTTTGATGTATGTTGCGAGACGAATCTTTTAAGCCTAGTTAGGTTATGGTAGGATAATATCTACCACAAACAAACGAAAAGTGCTACAGTGCGCTGCAGTGTTTTTCCCCGCGCTACAGTGAATTTCAAGGGAACTAAACACACCCATTACATCGAAGCTCAACTTTGAATAGTAATATTCCAAATAGTACAGTGAGATCGAGGTTTCAAATCACAAGTACAGGCCATAAAAATAACATTTTCATGTCCCCGATGCTTCTGCTTTCCTCAGATCCAGGAATGGTATTTCAACAGGCACGCTCTCATCAGATATCTATTCAAGTGCGTCTGACCACCTTCAGGGACCTCAAAACAATAGTGCAAAGCTGCCTTCTACATTCATATCTGCTCCCCAACTGAGGCGCTGAGGTCAAATTCCCCCTTGATTTGTTTGTGACCAGGACACCCTTCCTGCCTGGTTCAGTACCTTGCATTGCCTTCTTGTCCTTCATGCTTGGTTCACAAGGTGGAACTATATTCACCATCAGCCGAGCAGACAACACCGATCTCCAGTATGGGAAGAACTTGTTTCTCTCGTCTCTTAGGGCCAATCCTTTAGGCGGTACCTTGTTAATAACTTTAGCATTCAGAGAAGATGAGTTTTCAGCTTTGTCAGGTTCCTCAGCATCCACTCGTGAGACTGATTTATGAATCGCTGTTGCCCAAAG



gi|304504183|gb|HO302529.1|HO302529 CFCB2151.b1 CFCB Panicum virgatum WS4U normalized leaf Panicum virgatum cDNA clone CFCB2151

CCTCAAAAGATTCGTCTTGCG
||||||||||||||||.||.
CGAGTTTTCTAAGCAGAGCGT

EST sequence (targeted fragment marked with yellow):
GTCGGGTCAGGATAAGCTTCGGGCCATGTTTAGTTACTCCCAACTTCCAACTTTGACACTATGCAAAAAGAAGATTCCCCATCACATCAAACTTACGGTACATGCATGGAGTACTAAATGTAGATGAAATTAAAAAGTAATTGCACAGTTTTGTTGTACTTTGCGAGACGAATCTTTTGAGCCTAATTAGTCAATATTTGGACAATAATTCACAAATACAAACGAAACGCTACAGTGTGCTACAGCGCTGTAACAGTAATTTGGCACCTCCCAAATTGGCCAACTAAACAAGGCCTCGCTTTCTTATGTCAATATCTAATCAACACCGGATATTTTGCACTTCGCCTTGTCATCAAGCACACAAATCTGTCCTTTACCTTCCTGCCAAATCTATCATTATCCTTAACTATATAAACAATCATAAGTGATCATCGTAATGGTGGGGCCATAACGTGTCCGTTCACTCTCGATGCAGGAACGCGAAATCGAAGTCCTGCCCGTTCTGCCGCGCCTGCCTTGAGGAGGTGAAGCCGGGCAGCCTGTGGGTGTTCACCGACGACAGCGACGTTGTGGATATGGATACCTTGACCAGGGAGAACATCAGGCGGCTCTTCATGTACATAAACAAGCTGCCGCTCGTAGTCCTACATGTAGCTGACCTTGACATTACGAGTACCGTATCAGTAATTGAACTGATCCTTGTTCGTACCTAAAAAAAAAAAAAAAAAGGCC



gi|198312760|gb|FL980492.1|FL980492 CCHY15559.g1 CCHY Panicum virgatum callus (N) Panicum virgatum cDNA clone CCHY15559 3', mRNA

CCTCAAAAGATTCGTCTTGCG
|||||||||||||||||||||
GGAGTTTTCTAAGCAGAACGC

EST sequence (targeted fragment marked with yellow):
ATCGGAAATGTGCGACGATCATCTCCTTATACTAGAAAAGGCGTTCCATGTGCTCAGAAAAAGTGGTGTCAATGTTCAGATGATCTCGCAAGGGGCATCCAAGGTTAACATGTCGCTGATAGTTCGTGACAGCGAGGCGAAGGCATGCGTAAAAGCCCTCCATCAGGCGTTCTTCGAGGACGATGATGTCCTGACACAAGTTGAAGTGGAGAATTTGCTCGTGAGTTGATGAATACAGGCCGCCACCTCCATCAGCGAGACGATGATGTTCTCCAGCACGAGCTCCACACCTTGTCATCTCCATCAGTGGCTTTAATATGACAGATCTTTCCATGGACTCCATCGTGTATTCAGTATGTCAGTCAGCTTCCCGTTGAATGACTATAAAGGGGGCGTTTAGTTCCCAAAAACAAAAATTTTTGGGTGTCACATCAGTGTTTGACCAGATGTCGGGAGGACTTTTCGAACACTAATTAAAAAACTAATTTCAGAACTCACTTAGAAACCGCAAGACGAATCTTTTGAGGCCTTTGACCGCATCATAGCACATGTGAGTTACTGTAGCACTTATGGCTTATCATGCCCTAATTAGGCTCAAAAGATCCGTCTCGTCGTGTACATCCAAACTGTGTAATTAGTTTTGTTATTTAATTATATTTAGTGTTTCAT



gi|198094333|gb|FL819520.1|FL819520 CCGG16797.b1 CCGG Panicum virgatum late flowering buds + seed development (H) Panicum virgat

CCTCAAAAGATTCGTCTTGCG
|| |||||||||||||.| |
CGAATTTTCTAAGCAGAGCAC

EST sequence (targeted fragment marked with yellow):
TTTTGATTAGCACGAGACGAATCTTTTAAGCTTAATTAGTCCATAATTAGACATTAATTGCCAAATAACAATGAACGTGTACAGTATCAAAACCTAAAAATTTTCGCGGACTAAACAAGGCCTGAGTAGTTCATGTAAGATCATGCAAGATCAGGTATACATTACTCGCGAAAGAGTGCTTGTCAAGAGAGGCGCAGATTTTACTTGCAAGATTTCTTGTCATGTACGTCGTAGGCACAATGTTGGCACATCCATCCGAAAGGCATGCTGCGACACCAAGTTTAACGTCTCACATATAACCTATGCAGTCCCAAGTACAAGCGTACAACAATCCTCAACTCCCACTTTCGATTTATTACGCGGATGCAGCGCTTCAAAATGTCATCATCCATTTGATACACAGATTTATTTTGTACGGAATCCATTTTATTCTTGTGAAACAGACGCAAGTTTTCTCCTGCCAGCTTACAGCTTGGCGGGGGGCTGCTGGTACCATCCCCACGGCTCATCAGAGATGTACTCCGTGACTTGCTTGATGCTCAGGTAGTTATCAATGCCCCCTTCTCCAAGCTCGCGACCAAAGCCACTGCGCTTGTTCCCACCCCAGGGAGCCTGGCAGAAGCAGGGTTGCGAGCAGTTTACCCAGATACATCCAGCGTCGATCTCCTCGGATAATCTCTGGCAGCGTTCACGATCATGGGAAATTACAGCGCCCGCCAAGCCATAATGTGTATCATGGACAGTTCAATGGCTTCATCTTCAGTGGCTAAATTCT



gi|197988940|gb|FL730532.1|FL730532 CCGB11101.g1 CCGB Panicum virgatum apex + stem (L) Panicum virgatum cDNA clone CCGB11101 3',

CCTCAAAAGATTCGTCTTGCG
||||||||.||||||||.|||
GGAGTTTTTTAAGCAGAGCGC

EST sequence (targeted fragment marked with yellow):
TCCAACTTTTTTGCAAACTAACGCAGCTTAGGAACTGAGCATTTGTTGAAATTTGTGCATGCAACGCCTCCTACACGCCTTACATTGTGGGCACATATAATTTGAAAGTAAGTATTGTTGGCTTTTGCTTAAGGGGCCGTTTAGTTCCCGAACCAAAAATTTTTGGATGTCAAATCGAGGGTTTGACCAGACGTCGGAAGGGCTTTTTGGACATTAATTAAAAAACTAATTTCAGAACTCACCTGGAAACCGCGAGACGAATTTTTTGAGGCCTTTGACCGCATCATTAGCATAAGTTGCACGGATACGGATACGTGTATCGGTATCGGAAGGATACGGATACGCGGATACGACAATTTTCTAAAAAACCCGATACGCGGATACGTTTACTATTTAAATAAAATAAAATAATAATAATAATGCAGCGCCACAAAGTATTTCCTCCACCAATAATAATAATGGCTTCTCCAGAATGGAGCCAATTCATGTTAGTACCTACGTATTTCATAAGAAATATGGCACCAGCATATCAACTACTAACTGCGGGTCCCACATATCATACACTTCATTTTTTATCCACCCACTCCCCCCACCCCGTCGCACTCCACTCTCTCTCTCCTCCCTTCACTCTCCCCAGGCCGGCGGCGGCGCTCCTCCGGCCTCCCTCGCCGGCACCGGGCTAGACGGCGGCAGGCGCGGCAGGTGCGGCGGGCGGCCACCGGATCTGGTCGACGGCGGGGGCGCGGCGGCCCTCCTCCCTCGTCGCGCTGGATCCCCCTCCCTCCTCCCTGCTCCCTCCCTCGGCGGCCAT



gi|198069375|gb|FL795052.1|FL795052 CCGF19026.g1 CCGF Panicum virgatum early floral buds + reproductive tissue (L) Panicum virga

CCTCAAAAGATTCGTCTTGCG
|||||||||||||||||.|||
GGAGTTTTCTAAGCAGAGCGC

EST sequence (targeted fragment marked with yellow):
GGAAGAAGCTCTGAAGAAGTATGATATGGGAGATGATAAAACAATAAAAGAGATCATTGCTGAAGTAGATACAGATCACGATGGAAGAATTAATTACCAGGAGTTTGTTGCCATGATGAGGAACAACAGCCCTGAGATTGTTCCGAACCGGAGGCGCATGTTCTAACTGCCGTGTACAATTTGAGTGGACACTTCTGGGGATATTTTGCCTTAGACATCTTCTCCTGGAGCCATTTTCTTTTGGGGAAAGCCATTAAGAGAACTACATTTGAGATCCATATCTCTGCAGCCAGGACCAGTTTGTACCAGAATGGGACGCATGATATTGGGACTCAGACACCGTTTAGTTCCCAAAATAAAAGTTTTTGGTTGTCAAATCGATTGTTTGACCAGATGTCGGAAGGATTTTTTTACACTAATTTAAAAACTAATTTCAGAACCTGCTTGGAAACCGCGAGACGAATCTTTTGAGGTCTTTGACCACACCATTAGCACATGTGGGTTACTGTAGCACTTATGTATAATCATGCACTAATTAGGCTCAAAAGATTCGTCTCGTCGTGTACATCTAAACTGTGCAATTAGTTTTGTCGTTTACCTATATTTAATACTTCATTCATATGTCT



gi|197978184|gb|FL716621.1|FL716621 CCGB3406.b1 CCGB Panicum virgatum apex + stem (L) Panicum virgatum cDNA clone CCGB3406 5', m

CCTCAAAAGATTCGTCTTGCG
||||||||||||||||.|
CGAGTTTTCTAAGCAGAGCAG

EST sequence (targeted fragment marked with yellow):
CGGGTGTCAGCGTGATGGCTACTGCTACTGGCTTTCGGGCACTATTTTAACACTGTGGCTGTGTTTAGTTCCAAAATTTCTCTCTCCAAACTTCACTATTCACTTATCACATTAAATCTTTTGCCTCATGTATGGAGCATTAAATGTAGATAAATAAAAAAATTAATTGCATAGTTTTGATGTACACGACGAGACGAATCTTTTGAGCCTAGTTAGGTCATGGTAGGACAACAATTACCACAAACAAACGAAAAGTGCTACAGTATACTATAGTGTCCAATGTGACCTTTTTACCACCATTTTACACATCTAAACACAACCCGTGCTTATCGGTAATGCCAAGCGCGGCACATGTCTGTCAAACAGCGGGCAGCAATGTGCGCATCCATTTGCTCGATCGATTGGCCCCTCTGCTCATCTGAGCAACCGCGCCAATCCATATGAGCTCGGCATTATTCAAACCACCTGTGTCGAGATCAATGCACGATGATACATGCAGCACGATCTGGCCGGCGGTTCCCTTCCCCATGGCGCGGATCTTGTTCAGGCTGATAGCCAAGCGCGGCGTGGCCTTTGTTTGTGCAGGCAAGCGACGCGGAGGTGTGCAGCATCTGCTTCGAGCAGCGTGCAGCATCGAGGTCCGGGGAGGTGCGGGCACCAGATGTGCGCGGCGTGCACGCTG



gi|198013140|gb|FL761145.1|FL761145 CCGC10278.g1 CCGC Panicum virgatum early floral buds + reproductive tissue (H) Panicum virga

CCTCAAAAGATTCGTCTTGCG
||||||||.||||||||.|||
GGAGTTTTTTAAGCAGAGCGC

EST sequence (targeted fragment marked with yellow):
GCATGCAACGGCCTCCCTACACCGCCCTACATTTGTGGGCACATATAATTTGGAAAGTAAGTATTGTTGGCTTTTGCTAAAGGGGCCGTTTAGTTCCCGAACCAAAAATTTTGGATGTCAAATCGAGGGTTTGACCAGACGTCGGAAGGGCTTTTTGGACATTAATTAAAAAACTAATTTCAGAAACTCACCTGGAAACCGCGAGACGAATTTTTTGAGGCCTTTGACCGCATCATTAGCCTAAGTTGCACGGATACGGATACGTGTATCGGTATCGGAAGGATACGGATACGCGGATACGACAATTTTCTAAAAAACCCGATACGCGGATACGTTTACTATTTAAATAAAATAAAATAATAATAATAATGCAGCGCCACAAAGTATTTCCTCCACCAATAATAATAATGGCTTCTCCAGAATGGAGCCAATTCATGTTAGTACCTAGGTATTTCATAAGAAATATGGCACCAGCATATCAACTACTAACTGCGGGTCCCACATATCATACACTTCATTTTTTATCCACCCACTCCCCCCACCCCGTCGCACTCCACTCTCTCTCTCCTCCCTTCACTCTCCCCAGGCCGGCGGCGGCGCTCCTCCGGCCTCCCTCGCCGGCACCGGGCTAGACGGCGGCAGGCGCGGCAGGTGCGGCGGGCGGCCACCGGATCTGGTCGACGGCGGGGGCGCGGCGGCCCTCCTCCCTCGTCGCGCTGGATCCCCCTCCCTCCTCCCTGCTCCCTCCCTCGGCGGCCAT



gi|197977210|gb|FL720093.1|FL720093 CCGB5226.g1 CCGB Panicum virgatum apex + stem (L) Panicum virgatum cDNA clone CCGB5226 3', m

CCTCAAAAGATTCGTCTTGCG
||||||||||||||||.|
CGAGTTTTCTAAGCAGAGCAG

EST sequence (targeted fragment marked with yellow):
CAGACCGTGGAACCAATGAAAAACAGCACTGAAGAACCAATGAAAAACAGCACTGAAGATGAAGTTAACATGAAAGAAGACCTCTCAGAGTGCAGAACACAAGAGAATACTACATCAGATAAGAAAGAAGATACGAGCCAACATATTTGCAACTTGGATTTAGACAAATTTGGTGTAGCTCCTATTGTCAGCTCCTCAACCAATGAAGAAAATGCAACCATACCCTCTATCAGTTCCAATCGAACTGCATGCATGTACACATTCAACCGTAGGAAGGGAAAGAGCAAGCACATTGAGAATAGTACTGATGATTCTGTCACTGACAAGATTCTCCATCATATGGGTCCAGTAGAGGAACACAAATCTCAAGTGATCTTGACAGACTCACCACAAAGTAACAGGCGTCTGCTTGAGGTCGCTAGTCAGCTCATTTCATTGTCCGAGAAGTGAGAAAATTGAACTGCAGAGAATGGGTGCCAAGAATCGTGGATTCAATCCCTAAGGCGGGGGCGGCCATTTCTCCAAATGTCCCAAATGATCTGTTAAGTAGGGACAGGTCATCTGGTGGAAATGCAGAAATTTGAAGCGCAAGATATGTCCACCATGTAGCTAGAAATTTCTTTGTGTGCATACATTACAAGTGCAAAGCATATGTGAGCCCGTTTAGTTACCAAAAAATTTCAACTCCCCTTTGAACACATGTATGAAGCACTAAATGTAATTAAATAACAAAACTAATTACACAGTTTGGATGTACACGACGAGACGAATCTTTTGAGCCT



gi|304488365|gb|HO288588.1|HO288588 CFBY6206.g1 CFBY Panicum virgatum Dacotah normalized leaf Panicum virgatum cDNA clone CFBY62

CCTCAAAAGATTCGTCTTGCG
||||||||||||||||.||.
CGAGTTTTCTAAGCAGAGCGT

EST sequence (targeted fragment marked with yellow):
CAGCTATAGCTAGTAGCTGATCGAACGATTAAAGTCAATATATACTGGGTGTGTTTAGTTCCCACCAAATTTCCAAACTTTCCATCACATCTATCACATCTCTTATCACATCGAAACATTAAATATAGCAAATAACCCATGCATGGAGTACTAAATGTAGTTAAATAAAAAAACTAATTGCATAGTTTTGATGTACGTTGCGAGACGAATCTTTTGAGCCTAGTTAGGTCATGGTAGGACAATATTTACCACAAACAAACGAAAAGTGCTACAGTGTGCTACAGTGACTGATGTGACTTTTTCTTCGTCTTTTCATCTCATCTAAACACAGCCACTGTAATTGTTAGTACTTTGTTAGGCTTTACTGAAGAGTTCTTATGCTGCCGATAGGAAACACCAAGCGGCAGTAGATCGGCTTTTATGGAAAGCTTGATTTGTTGTAACTATATAGAGGCTTCTTTTCTGGTGTAACTGTGTAAGTAACTGTTGTATTCGCGTCAGTGTATGGCTATTGTTGTTCGGAAATCGGACTGTGAGTCGTTAGTTATTGGTTTGTACAACTATTTAAGGTGGACGACGCTGGTGGTATCATTCAACTCTGATACCAATTAG



gi|304484911|gb|HO284225.1|HO284225 CFBY3672.b1 CFBY Panicum virgatum Dacotah normalized leaf Panicum virgatum cDNA clone CFBY36

CCTCAAAAGATTCGTCTTGCG
||||||||||||||| || |.
GGAGTTTTCTAAGCAAAA-GT

EST sequence (targeted fragment marked with yellow):
AGCAGGCTGATGATCTAATAAATGAGGAACTCCTTAGGCTCCTTGAGCATGATAATGCTAAATATCCCCTTGATGAAAAAACTCAAAAAGAGAAAAAGAAAGGGAACAAGAGGCAGGCAAATGCAGCTGCGGTTCCTGAAATTGAGGATTTTGATGAGGGTGAATTAAAAGAGGCTAGTTCTTTGGTTCAAGAGGAGATTCAGTATCTTCGTGTGGCCATGGGGCATGAAAACGAATCTTTTGAGGATTTTGTGAAAGCTCATGATGCGTGCCAAGAGGACCTTATGTATTTTCCTACAAACAACAGCTATGGTCTTGCCAGTATCGCTGGAAACGCTGATAAGATATCCGCTTTGCAAAATGAGTTTGAAATTGTGAAGAAGAGAATGGATGAGGAAGCTAAGAAGGCTTCTCTTCTGGAGCAGAAGATCAAACTTCTTACACAAGGGTACCAGGTACGGGCTGGGAAACTGTGGTCGCAGGTCCAAGACACATCCAAACAGATGGATACTGCTGCAACAGAACTTGAATGCTTCCAAGAGCTCCAGAAACAGGAACAGTTGGCAGCTTCCTACCGTGTCAGAAACTTGACTGAAGAAGTGAATAAACAGAAAGCTTTAGAAAGAACACTCCAAAGCCGCTATGGTGATTTGATGTCTGTTTACCATAGAATCCAAGAACAGCTTGAGGAACACAAGATTCAAATTAGGAAACAGGAGGCAATAGAAGCAGAAAATCGTGCTCGAGAGGAGCTGCAGCAC



gi|198321206|gb|FL985716.1|FL985716 CCHY18444.g1 CCHY Panicum virgatum callus (N) Panicum virgatum cDNA clone CCHY18444 3', mRNA

CCTCAAAAGATTCGTCTTGCG
||||||||||||||||.||.
TGAGTTTTCTAAGCAGAGCGT

EST sequence (targeted fragment marked with yellow):
CTCAAAATTCATGAAAAACTGACTGAGAAAGCAGGCTTAGGATGTATATTGCGGTCGCTTGCCGATACTGTAAACACTGTATGAGCTTGTGAGCTTCATCTATGAGGTTGGACAGAACAAAGTTTCCTTCTGCTCTGTGCTGCGATAAATCACAGCAGACAACTTAGCTGTATGAAAATTGTTGGCTAGTTATTTAGATCTCATCTGGCAGTTTCGGTTAGAGCATCATTGTACCTTACTAGAATGGCTGAATCTGAACTTGGGTGTGTTTAGATCCACCAAAAACCTCCACAAAATCCAAACTTTCCATCACATCAAAATCACATCGAAACATTGAATATAGCAAATGACACATGCATGGAGTACTAAATGTAGGTAAATAAAAAAACTAATTGCATAGTTTTGATGTACGTTGCGAGACGAATCTTTTGAGTCTAGTTAGGTCATAGTAGGATAATATTTACCACAAACAAACGAAAAGTGCTACAGTGTGTGATGCGACTTTTTCTCCCACCTTTTCAAGGATCTAAACACACCCCTTATGTAGTATTATGTTGTT



gi|197975013|gb|FL721098.1|FL721098 CCGB5772.g1 CCGB Panicum virgatum apex + stem (L) Panicum virgatum cDNA clone CCGB5772 3', m

CCTCAAAAGATTCGTCTTGCG
||||||||||||||||.|
CGAGTTTTCTAAGCAGAGCAG

EST sequence (targeted fragment marked with yellow):
GCAGCCCCTCCCGAAGGATGACGACACCGTCGTCGTGGAGATCTCCCACCTCAGGCAGGTCACCATGCTGGCAAACGAGCCCTGCAGGTCCAAGAGCGTCAATGATCCGTCGCTACCATCGCCGGCCCACAACAGCCATGGCGACGACAAGGATGCCGTGGAGGAGGACGAAGACGAGTGGGAGGATGGCAGGAGGAAGTTTGGGGCCGCGGATACCTTCAAGCTCCCTGACGAGATCGACATTGCTCACCTCAGTTGAGCTTGGCTTCTGCATTGGCCTGTGCATTCTGATCATAGGAATTGATTTGCTATCTGATTGCCTCAGCCCTGTATAAGGGGCCGTTTAGTTCCCAAAAATTTTCGCCCAAAAATTTTCACCTCCCCTTTGAACACATGTATGAAGCACTAAATGTAATTAAATAACAAAATTAATTACACAGTTTAGATGTACACGACGAGACGAATCTTTTGAGCCT



gi|198148825|gb|FL864746.1|FL864746 CCGI8582.g1 CCGI Panicum virgatum etiolated seedlings (H) Panicum virgatum cDNA clone CCGI85

CCTCAAAAGATTCGTCTTGCG
|||||||||||||||||.|
GGAGTTTTCTAAGCAGAGCAG

EST sequence (targeted fragment marked with yellow):
TTTGATATTCGCCAGAAATGAGTTTTTTACCTTATGTTTTCTGCGGCTGTGTTTAGTTATAAAATTTATCTCTCCAAACTTCACCGTTCACCTATCGTATCAAATCTTTTATCTCATGTATGGAGCATTAAATATAAGTAAATAAAAAACTAATTATATAGTTTTGATGCTCACGACGAGACGAATCTTTTGAGGCTAGTTAGATCATGGTATGACAACAATTACCACAAATAAACGAAAAGTGCTACAGTGTGTCTGATGTGACCATTTTTACCACCATTATTTTACGGATCTAAACACTAACCCTGCAAGTTGCAGCTCCTGACATCCAAAATTGTCGCTGAAGAAGCCATGGCGAAGGCGGGTACAGAGCAGCCTGTATGCAGTTTGCTGACCTGGCTGTTCCATCACAGCGTAAAGTACTAATCATT



gi|198057735|gb|FL788916.1|FL788916 CCGF15647.b1 CCGF Panicum virgatum early floral buds + reproductive tissue (L) Panicum virga

CCTCAAAAGATTCGTCTTGCG
||||||||||||||||.||.
CGAGTTTTCTAAGCAGAGCGT

EST sequence (targeted fragment marked with yellow):
AATAATTCAATTATACAATGCCAAAGCGCTTTGTTTAATCCCTACAATCCATGAATTTGATTGCTTAACTCAGCATCATGCTACAACCTCGTACACATGTTGGCAACATTTCTGTTCTGACATCCAATATTTTTGCCTAATCTGTCTGCAGGCTTGTCAGTTTGTGGTCTAAACAGAGCAGCCGATGGCACCTTGGGCTGTGTTTAGTTCCAAAAAACTCCTCCCCAAACTCCAAACTTTCCATCACATCTCCATCACATCAAAACATTAAATATAGCAGATGACTCATGCATGGAGTACTAAATGTAGTTAAATAAAAAAACTAATTACATAGTTTTGATGTACGTTGCGAGACGAATCTTTTGAGCCTAGTTAGGTCATGATAGGACAATATTTGCCACAAACAAACGAAACGTGCTACAGTGCGCTACAGTGACTGATGTGACTTTTCGCATCCACTTTTTACACTCTTTTTACACATCTAAACACACCCTTGGTAGGACTAGGCTGTCTGCCTTACCCGGTATGGCTCTTGAAATGGAGACATCATTGTCAATCTTTGTTGTTCCTGCACGGTTTTAATACTCTCATACCAGAATCTTGATAGTGTTGATCAAATGCGAGCTACCTTCCTTTACAGATGTCTTAAAAACGATCTGGGGTTCACTCTCCATTCAAGGACCTATCTGACCAACTGCACAAGTAGCATCAGCCGTAACAGTGTTGCTGCACCCACGCGTCCTGTCACTGTCAGCATCC



gi|198337679|gb|GD003494.1|GD003494 CCHY28293.g1 CCHY Panicum virgatum callus (N) Panicum virgatum cDNA clone CCHY28293 3', mRNA

CCTCAAAAGATTCGTCTTGCG
||||||| |||||||||.|||
GGAGTTTCCTAAGCAGAGCGC

EST sequence (targeted fragment marked with yellow):
AGATTTTCAGGCACTAATTAAAAAACTAAATTCAGAACTCGCTTGGAAACCGCGAGACGAATCCTTTGAGGTATTTGACCGCATCATTAGCACATGTGGGTTAGTGTAGCACTTATAGCTAATCATGCCCTAATTATGCTCAAAAGATTTGTCTCGTCGTGTACATTTAAACTGGGTAATTAGTTTTATTTTTTAACTACATTTAATGTTCCATGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACC



gi|198116099|gb|FL843984.1|FL843984 CCGH23799.b1 CCGH Panicum virgatum late flowering buds + seed development (L) Panicum virgat

CCTCAAAAGATTCGTCTTGCG
||||||||||||||||.||.
CGAGTTTTCTAAGCAGAGCGT

EST sequence (targeted fragment marked with yellow):
AGCGTACTGAACCTGCGGCGTCACGGTCAACAGCAAGCATGAAGAGCTCCGGCGTCGTGCTAGTGCTCCTGCTGGCCATCGCCACGGCGAGCTGCAGGCACTCGCTCGCCGCCGCCGCAGACGCTCACGAGAGCGGCGCCAGCATTCCGGCGATCCTGGGCCGCGAGCTGCGGGGGTTCATCGCCAGGGCCGGCAACATCTTCCGGTCGGCGGGGGGTGGCGCCTGGCGCGCCGCGAACGCCACCGCGTCCGCGTCCGCCGCCGAGGCGAAGAACCTGCGCGCCGTGGCGGCGGCCCGGCGGAGGCGCCCCGCCGCCCGGAAGTCCGCGGCCGGCTGCGTGAGCGCCGCGGCGTGCCGGAAGAGGCGCGTGATCTGCGCCAAGCGGTGCTACCGTGCCTCGCGCGCCGCCGCCGGCCTCACCCACGTCCCCTCCCGGTGCGTCGTCAAGTGCAGGAAGTGCGTGCCCACCTGCTAGCAAGCTCTGCTAGGTCGCCGCTGGCCCCCGATCCGATGTGATCCGCAAAACATGTTGGGTGTGTTTAGATACCCCAAACTCCTCCTAACTTTCCAAACTTTCCATCACATCGAAATCATATCGAAACATTAAATATAACAAATGACTTATGCATGGAGTACTAAATGTAGGTAAATAAAAAAACTAATTGCATAGTTTTGATGTACGTTGCGAGACGAATCTTTTGAGCCTAATTAGGTCATGGTAGGA



gi|198324906|gb|FL992255.1|FL992255 CCHY21821.g1 CCHY Panicum virgatum callus (N) Panicum virgatum cDNA clone CCHY21821 3', mRNA

CCTCAAAAGATTCGTCTTGCG
|||||||||||||||||.|||
GGAGTTTTCTAAGCAGAGCGC

EST sequence (targeted fragment marked with yellow):
GAGCTTATACGGCAGGCCGAGTCCATGGGTGCCTCCAAGCTTTGAGGTTTATGCTGACTTGGAAATATAGGAGGAAAGTTCTTTGCGTAGTACCAGACTCAGGATTTGTACATGTGCTGCATTTTCAGGTACCGGCTTTCACTCGTGCTCCATGGTGACGCTACGGAACTGTTTGATCAAATGGGGCTTGCGAGTGCGCTTGAGGGAGATTCCTCTCAGTGCATTGTCAGGTACCACATTCAAATAGGTAATGAATCTCCATGGAAGAAGACAGATGAGGGAGAGGCAGTAGCACTGAACTCTCAACTCTCAAGGCATGACTCGGGAGGAGGCAGTGACAACAAAACGACATGACTTATTGACGTGGCTACCACCCTGGACAGAAGGAAGAATCCGGCGTGCCGTGGTCTCCGGGTTGTTGGCAACTTGTTCCCAAACCAAAAAAATTTTGGGTGTCACATCAACAGTTTGACTAGATGTCGGAAGAATTTTTCGGACACTAATTAAAAAACTAATTTCAGAATTCACCTGAAAACCGCGAGACGAATCTTTTGAGGCCTTTGACCGTATCATTAGCACATGCGAGTTACTGTAGCACTTATGGCTAATCATGCACTAATTAGGCTTAAAAGATTGTCTCGTCGTGTACATCCAAACTATGTAACTAGTTTTGTTGTTTAATTACATTTAATGCTCAT