| mature miRNA: GTACTCCCTCTGTCCCAAATT species: Panicum virgatum database: miRNEST The numbers on the right side of the alignments show a score calculated for them. When calculating the score, a mismatch is given a score of 1, bulge: 2, and wobble: 0.5. |
| Predicted miRNA targets | |||||||||
gi|198108792|gb|FL837745.1|FL837745 CCGH20230.b1 CCGH Panicum virgatum late flowering buds + seed development (L) Panicum virgat GTACTCCCTCTGTCCCAAATT EST sequence (targeted fragment marked with yellow): GGAAAAACAGATGTTCTCCTAGAGTTTCATCATGATGATACTACTGGGGCCAATGAGAAAGATTCGCTCATGGATTTAAGTTTTCATGTGCCTACTTCAAATACTCAGTTTGTCGGGGATGAGAATCGCCCTCCGGCTCACATTCTTTGGGAGACTATACTGAAATTTGCTGATGTTGGTTCCTCTGAAGAGCCAGTTGTCACCTTTGAAGGAATTGCGATTCTTACACCAAGAGGACGTTATAGTGTTGAGCTTCATCTGTCATTTCTACGACTCCAAGGGCAGGCTAATGACTTTAAAATCCAATACAGCAGCATTGTTCGCCTCTTTCTTTTGCCAAAGTCAAACAATCCTCATACATTTGTGGTTATCACTCTTGATCCACCAATCCGTAAAGGGCAAACATTGTATCCTCACATTGTTATTCAGTTTGAGACAGAGGCAGTAGTTGAAAGAGACCTGGCATTGAGTAAAGAGCTTCTAGCTGAAAAATACAAAGACAGGCTTGAGGAATCTTACAAGGGTCTAATACATGAGGTATTTACCAAAGTCCTTCGTGGGTTATCCGGTGCTAAAGTCACAAGACCAGGTTCTTTTAGAAGTTGCCAAGATGGATATGCAGTTAAATCTTCACTCAAAGCTGAAGATGGACTTTTGTATCCACTTGAGAAGGGTTTCTTCTTTCTGCCAAAGCCTCCTACACTCATCCTGCATGAGGAGAT | |||||||||
gi|198125988|gb|FL853425.1|FL853425 CCGI2723.g1 CCGI Panicum virgatum etiolated seedlings (H) Panicum virgatum cDNA clone CCGI27 GTACTCCCTCTGTCCCAAATT EST sequence (targeted fragment marked with yellow): CATTGGAGGGCGCGGCGAACCTCAAGGGCGTGGGGCTCAAGGCGGACGACATCGCCGCCGCGGCGCTCTTCCTCGCAAGCGACGACGCCCGGTACGTGAGCGGGCAGAACCTGCTCGTCGAGGGCGGCTCCTCCGTCGTCAACCCGTCACTTGGTTTCTTCAGGGACTGAGATGCATGGAGACCCAAGATCGATAGATAATTGCAATCACGTTTCTTCTCGAATAAAATGGGATGCATGTATGGTGTTGTTGTTTTCCACATGTTTGTACGGAGACATTTTAAGTATTCCAAGACACTCTATGTACTCCCTCCGTTTCAAAATGTAGGTCGTTTAAACTTTTCTAAATTCATATATTTTGCTATGTATCTAGACATATATGTTATATAAAGATGCTTAGCAAACACTATGAACCTAAAAAAACCAAAACAACCTACATTTTGAAACAGAGGGAGTATCATCTAAAGAATTGGTCC | |||||||||
gi|198199819|gb|FL909842.1|FL909842 CCGO6029.g1 CCGO Panicum virgatum root (H) Panicum virgatum cDNA clone CCGO6029 3', mRNA seq GTACTCCCTCTGTCCCAAATT EST sequence (targeted fragment marked with yellow): TAGTTGATTAACTTTTTTTTGTACGTTGGTAAGCATGCCATTGTGTTTTCCTACCTGTTTATTAGTGTCTCATAATGCAATCAAAGCATTGCTGCAGCAAATATAATTTCAGTGGCTTGTTTGTGATTCCTCTCTGCATGTTAAAAGTGATGGAACTCGAGTCCATTCCAGCTCGAAATTGTGGTGGTGTGCAAACCTGGACAGCAGGTATTTTGGGGCAGGCCTATGCAGTAAAGCAGATACTAATATGTACTCCATCCATTTCAAATAATTAGTCATTTTTGGCTTTTCTAGATACATAATTATATTATATTTAGGTACATAGCAAAATCTATGAATCTAGAAAAGCTAAAGCGACTAATGATTTCGGACAGAGGGAGTACTTATTATCACTTCCGTTAGAGTGTGACGAGAGCCTCAAAAGTGGCAACTTTCCTGCTGTTTTATTTGCTTCTTACAAGTATTCTTCTTTCATCCAGACAATTTCGATTCTTCCACAGCTGCAACACTGTATCCCTCTGTATGTGTGAACAGAAATCACGCCGTTTCATCAGTGGAGCTCCGGATTTGCGCGCTGGGGTCTTCTCGTACCTCACGGGCTTGTACACCAGCGTTTGGTCGCCGCCGACGAGCTCGTCCATCGGCCTCGTC | |||||||||
gi|197962112|gb|FL701673.1|FL701673 CCGA743.g1 CCGA Panicum virgatum apex + stem (H) Panicum virgatum cDNA clone CCGA743 3', mRN GTACTCCCTCTGTCCCAAATT EST sequence (targeted fragment marked with yellow): ACAGCTTCAGGCCAGCTTTCACAGCCCTGGTCTTAAAACTGGTTGCACGCACCGAGGTCATCAGGCTTTGTATTTTCAAATTTCGGCCGGCTCACGAGTCCTGTTCAAAGTTTATTTGGAACAATGTTAAATGTCATTCTGTGAAGGATATGCTCTTACGTCTGTATAGCCTGGAAGCATAATACAGAAATACTACCAGAAGGACAACTCACACCAGCTTCAATTCTTCAGCGCAGAGAAATGACTACATTGGTGGTCAATCCTACAAGACCCTCCTACATGATAGAATGAGGATGTGGCCATCATTTTGTCAAGCATCTACCGCTACTACCAGCCATACTCTAAAGTAGCTGAACAACCTACCAATATGAAGCATCCGCCTACTTAGTATTCAGTTATTCAAAACTTATCTATGGACAACTAATGTGTAATATTGAGTATTGTAATTTGCTATCTACTCCCTCCGTTCCAAAATGTAGGTCGTTTTGGTTTTTTTAGATTCATAGTATTTGCTATGCACCTAGATATAACATATGTCTATGTACATAACAAAATATATGAATCTAGAAAAGTCAAAATGACCAACATTTTGGAACAGAGGGAGTAGAACTTATGTCTTTGTATGCTGGTCTAAAAAATGAAAAAACTATGCTATCTAGGGTTGAAAACGAAAACGAAAATTTTCGATT | |||||||||
gi|198081034|gb|FL806145.1|FL806145 CCGG5995.g1 CCGG Panicum virgatum late flowering buds + seed development (H) Panicum virgatu GTACTCCCTCTGTCCCAAATT EST sequence (targeted fragment marked with yellow): AGTAAAAATATTTGACTCAAGCTAAACCTAAACGTAGCTATATTTTAGGACAGAGCGAGTATTTTTGTTTTTTTCTTTGTGCAATTCGTGTTCACAGATTGGTTGGGCAACTGATAAAAGTACATGCATGCTATGAAGTTTCACAATACTTATTTTTAGGGTTAATGGGATACGTGCTATTGTAATTGCCTCATTTCCAACATACAGTCATACACCATTACTATTTGTGATATTGGAAGCATGCCATTACAATTTACAGTTGTTCGAGATATGCCATCACGTACCCCTTCAACATATTTATAAAATTTTCATGACCAAATTACCCATGTCTTCTTCCTCGAGGTGCAAAGCATTGGACGCAGCCATGGCCTTCGGCCACTGCCTCATCCCGGTGCCGGACGCGAGCAAGGTCAAGCCGAAACACAGCGGCTGCATACGTGCGTGAGTGCAGTGGCGACGGACAAGCGGGGCTGGGGCGGAACGCGGCCTTGCTGTCGCGGCGGCGCCTACTAAAGAAGCACTCTCGCCCAAGCTAGAGTGGAAGGCCTGCGACTACGAGCAGGTACGGTGCCTTCATCACTTGCAAGGCCCCGGATGATACTGCCGCTGCTACTTTCTCCTTGCCTCTTGTTGGCTGCCGCCTTCTCTTTGATGTGCTTATTGTTTGATCCCCTTTTGTTGCTGAATTGGTTCATTAGTTGCTTGTTAGCTTCGGTCAATCCGTGAGAAGCGAGGAGCAATAAAATCAAGCCGAGTAAGAGCCTCCATTTGCGTCGCAAATTTGGAATCACTGCACCACAATTTAATTCGATTTGATCAA | |||||||||
gi|198112147|gb|FL837357.1|FL837357 CCGH20013.b1 CCGH Panicum virgatum late flowering buds + seed development (L) Panicum virgat GTACTCCCTCTGTCCCAAATT EST sequence (targeted fragment marked with yellow): GCGATCAAGAAGGCCCGTGGCCTAGGTCAATGGCCCACATTGCACTTGGTGGCTGCGTTGGCTTACCATCTCCCCAAGTGGGAGAGTGGACGTCATAATTTGTGGCAGAGGGGGTACGCGTTCGCGCGGCCCCTGCCAACTCTGAAAAATTAAATTTTGGTCCCTCGGGTTCTGATTTATTTTGGGAGCCTTCCTAGTTTTAGATGGATCTCTGCCACGACTCAGTATGTGCACAGAAAAAAAAAACGAAGGGAACAAGCAAAGTATTCGAGGACCAGTCTTTTCTGATCCTTCGCCTGAACAGAACCGCCGCCGCAGACGACGCACGGTGAGGGGGGAGGCGAGCGGGGATGGCGCTGAGCGTGTCGTACGTGTCGGCGGCGAAGCTGGTGTCTATGGCGCGCGGCAATCCCCGCGTCGCCATCATCGACGTCAGGGATGATGAGAGGAGCCACCAGGCGCACATCGCGGGGTCGCACCACTTCGCCAGCGGCAGCTTCGCGGCGCGGATGCCGGAGCTGGCGCGGGCCGCCAGCGGCAAGGACACCCTCGTCTTCCACTGCGCTCTCAGCCAGGTGCGAGGTCCAACATGTGCTCGGATGTTCTCAGACTATCTATCGGAGACCAAGGAGGATTCAGGATAAAGAACATCATGGTACTGGAGCGCGGTTTAATGGATGGGAGGTTTCAGGCAGCCTGTCTGCCGCTGCACCGACGCTTGTTGCAAAGGGACGTGCTTTTGACCACACGAGTTCCAATCTCTCAGCTTCAACGATCGGC | |||||||||
gi|197972258|gb|FL714974.1|FL714974 CCGB2494.b1 CCGB Panicum virgatum apex + stem (L) Panicum virgatum cDNA clone CCGB2494 5', m GTACTCCCTCTGTCCCAAATT EST sequence (targeted fragment marked with yellow): ATGAAGGTGGCGGCCAGGGTTGCCGACATCTACCGCGTCCTCTACGGGGCCGCGCCCAACACGAAATCCGTCATGCTAGAGCTGTGGCGTGATCAGCATATCGAGTACCTGACACATGGGCTGAGGCATCTCGGGCCAGCCTTTCATGTTCTCGATGCCAATCGTCCATGGCTGTGCTACTGGATGGTTCATCCACTTGCTTTGTTGGATGAAGTACTTGATGATGATCTGGAGGATGATATCGTGGACTTCTTAGCTCGATGTCAGGATAAAGATGGTGGATATGGCGGTGGACCTGGGCAGGGCGTAGTTGTGGTGGACGGGAGGCCGGGGACTTGGCTCCCGGCGGCGGCGAGGACGCGACGCCATCCTGACGGCCGGCGTCGAGCAAGAGCAGGGGAGTGCGGTTACAGGGAAGGAGCGGGAGCCCTGAGATCCAAATGATCTCCAAGCTTAACCTCTATTCATTCTCCCAGTACATTAGTTATAGGTTACAGATTCAAACACAACACAAGCGCTAACTGGCACGACGTGCGTGGGCGCTTACAAATTCAAACACAACACAAATGCTAACTGACAAGTCGAGGACGCGTTCCTGGCTTCTCTTCTCAGCCACGATGGTGTCGTTCATACACGCTGCCGACCATAACATCATACTTATTTGGCATAAAAAATATTGGCAGCTTTTTGTGTAAACTTGGTCAAACTTAAAATAGTTTAACTTTGGACAAAACTAGAATGGCATTCTTTTGGGGCAGAGGGAGTACATTTTTAGGATGCTTTCATTAACCTTTTTACTACTGGGGTTT | |||||||||
gi|197982007|gb|FL723267.1|FL723267 CCGB6880.g1 CCGB Panicum virgatum apex + stem (L) Panicum virgatum cDNA clone CCGB6880 3', m GTACTCCCTCTGTCCCAAATT EST sequence (targeted fragment marked with yellow): AACATTTCTGGTAGTACAAGCAAGTGTGGTAGTGTGTCTTTCGGTTCGGACGAAGCCATTGGTAGGCGATGGCGTCGATGGTTGGTAGATTTGAGATTTTGAGCTGCTCTTTCTACCTTGTGACGGCACAGTGTTTTTCGACGTCCCAACTCCCAAAACTGTAGGCAAAGAACAGTAATGCATCATTGGGTTGGATCCGGCAGGTTTGTGGCTCGGTCTTCTTTTGCCGTTGCCCGTGTTAAACTCTGTAAGCTTGGGCCAGAAGATGCCCCGATCACTAATGTAGCCCAGGCCCACGAAAACGGCCACGGGCACCGAAAACTCGTGGGCGGAGCGGGCTATCAGTTGGGCAGGTACGTGGGCGTGCTGCCTAGGCGGGCCCTTTGAGGACAAAGCGAGTCCGATATGACTGTGTGTGATTAGCCCAGGCGTTAACCAGATGCTTAGCCAGGACAATAATAGTACCATACCGGCAGCCGAAGCAGGGGGTAAGAGGCGTGGGAAGAATAAATCAAGAGGGAGGGCCACCTTGCAAACATACTTACCTGGACGGGGTCTATGGCTGATCAAGAAGAGCCATGGCCTAGGTCAGTAGCCTCCATTGCACTTGGGAGGAGCACCGGCTTACCATCTCCTTAAATAGGAGAGTGGACGTCATAATTTGTGGCAGAGGGGGTACGCGTTCGCGCGGCCTCTACCAAATTTTTAATTAAAGTTTTAAGAATAATATAGTGTATTGTATTTTGACTTGGATCT | |||||||||
gi|198089798|gb|FL815559.1|FL815559 CCGG14616.g1 CCGG Panicum virgatum late flowering buds + seed development (H) Panicum virgat GTACTCCCTCTGTCCCAAATT EST sequence (targeted fragment marked with yellow): TCACATCGTCCAGCGTGTGAAACAGAGGATCGCCGCTGGCGACATCGGCTCGATTGCCGACTCACGGCTCGGAGGCGCTTTCGACGTCAGCTCCATGTGGAAGGTTGTGGACATTGCTATGGCGTGCACGGTGGACGCCAGCGCCGCGAGGCCCACGATGGCCGACGTCGTGGTGCAGCTCAAGGACAGCCTGGCGCTGGAGGATGCTCGGGTGAAGGACTGCAGCGTCCCGACGCGAACGGTGCAGCGTGATGATGCGGCTTTGATTCCCTCTTTTGGTCCATCGGTGAGATGAGGTCTACTCCCTCCATCCTCAAATATAAGTCATTTTAGCGTTTTTAGGACAGATTGTGGTTGTGTAGAAAAGACTCCCCTACCCCTAATTATTAAGCATTGGGAATGTGCTAATTAAACTAGCATGTTTTTTCTCATGCACCTCCCCCACATGTACCTCCCCCATATGATTGCATGCATATCTTTCTATTTGAAAAGACCCAAAAACAATGCACAATTAAGATGGTTGGGTCCATACATTTGAGGACAGAGGGAGTATATGGTTTGGTCCATTTGTAGTCTGCGCTGGGGCTTCTGTGCTGTGAACTTGATGTGGATTGTGAATGCACATTAGAGCCTGTTTGTGCATTAGAGCCTGTCTGTGCATTCATTTTCAATCTGTACTTGTTAGTGAGCACACAGGTAATAAGGTTGGCTGTCAAATGCGAAGGAAACCAGAACAATGAAACCATGGTTATCCAAAATAAAATAGTGATCCCTCCATTAGTTTTGATT | |||||||||
gi|304448879|gb|HO244602.1|HO244602 CCTW1342.b1 CCTW Panicum virgatum Carthage normalized leaf Panicum virgatum cDNA clone CCTW1 GTACTCCCTCTGTCCCAAATT EST sequence (targeted fragment marked with yellow): TTAACTTGGAGGGACTTTTAGATGGTGCTAGCCGTGATGTTTGGGTCCCACTTGAAAAAGTAGATTCAGGAGAGATCAGGCTTGAAATGGAGCCTATAAAGAATGATCACAACAATACCATGCAGAGCTCAAGTAGTAAAGCTGGAGCTGGTTGGATTGAGCTGGTTGTAATTGAAGCCAGAGATCTTGTTGCTGCCGATCTGAGAGGCACTAGCGATCCTTATGTCAGGGTGCAATATGGGAACAAGAAGAAACGAACTAAGGTTAGATTACAAATTTATCTTGCTAAGTTTACATGAGATCTCTGCCTAATCGGAGCTGCTAGTCATACTGATTTTCCGAGCAACTTTGCCACACTGTGCTGGATTAGTAGTATCTGGCATTATTGGTGCTTATTGTTTACTTCAGATCGTAGAACACTGTTCTTAGCTACTCCCGGCTCCCGCCGTTCCAAGACGTGTTAGCTTTGTCCTAAGTCAAACTTCTATAACAAATTTACCGAAAAAGTATTAATGTCTAAAGTACCGAATAAATGTATTATCAAGCCATACACATATTTCATGGTGGATTTGTAACGAAACTAATTTGATGTTGTCGATGTTGGTGCATTTTTTCTATAAACTTGGTGAAAGTTCGAGAAGTTTGACTTGGGATAAAGCAAAAGCATCTTACATTTTGGGACAGAGGAAGTATAATGAAAGCACTTCCTTGGTAATGCAAGGACGCTTGTCACTTTTTAGTCAA | |||||||||
gi|304463380|gb|HO261322.1|HO261322 CCTX859.b1 CCTW Panicum virgatum Cave-in-Rock normalized leaf Panicum virgatum cDNA clone CC GTACTCCCTCTGTCCCAAATT EST sequence (targeted fragment marked with yellow): GCTGCAGACCTCCTCAGCGCGGGCTTCAAGAATGTGAGGAACCTAGAAGGCGGGTATCTCTCCTTGCTCCGAAGCGCCAACCAGCAGCATCACCACCAGCAGGCTGCTGCTTAACCCATCCATTAATTGTCCTAGTATTATTTAACCATTCATGCACTACAAGATTCTTAGAATGACTTATAATTTGGAACAGAGGGAGTACTACTTTGTATGTATAAGGCGATGGGCATACATACATACAGCGGTATATATTTTCCTCTTGCATGATCTGCCTCCATCGCCATCCGTATCGATCTGTATGCAATAAAGAGGCCTGAACAAGAAGTAATGCAATAAGCAAGATCATTCATTTCGGAAAAAAAAAAAAAAAAAAAAAGAAA | |||||||||
gi|304521758|gb|HO316759.1|HO316759 CFHA4934.g1 CFHA Panicum virgatum K101 normalized leaf Panicum virgatum cDNA clone CFHA4934 GTACTCCCTCTGTCCCAAATT EST sequence (targeted fragment marked with yellow): GGGATCCACGATGGGAGGATGAATTCGAGTTTGTGTGTGAGGAGCCACCTGTAAATGATAAGCTACATGTTGAAGTCCTAAGTAAAGCCCCGAAGAAAGGGCTGATACATGGCAAGGAAACCTTGGGCTACATTGATATCAGCCTTGCAGATGTGATCAGCAACAAGCGGATTAATGAGAAGTACCATCTCATAGACTCAAAAAATGGTCAGATACAAATTGAGATGCAATGGAGAACTTCCTAGACGGAATTGGTACTAGAAATGTAACATCTCTAAAATATTTGATTGGCTCTATGCATTTTCATTTACAATGTATTCATGGTACTTGGTATTGATATAATTTGTTGGATCTCATTAGAAGCTAAAACAACACTCTTTGCACTTATTTTGGGACAGAGGGAGTAGGTGTGTTAATGTGTTACTGACCCTGGAAACGAACTCTGAACTTATTCTGTGACTACTACAGATCATACAAGTATACTCGGCATTCTGTCT | |||||||||
gi|198359919|gb|GD024969.1|GD024969 CCHZ12024.g1 CCHZ Panicum virgatum abiotic and biotic stress treatments (N) Panicum virgatum GTACTCCCTCTGTCCCAAATT EST sequence (targeted fragment marked with yellow): CGGGGGATGGGCGGCATGGATGTCAAGACGCTCGAGGCGTTATTGGAGGGCGCGGCGAACCTCAAGGGCGTGGGGCTCAAGGCGGACGACATCGCCGCCGCGGCGCTCTTCCTCGCAAGCGACGACGCCCGGTACGTGAGCGGGCAGAACCTGCTCGTCGACGGCGGCTCCTCCGTCGTCAACCCGTCACTTGGTTTCTTCAGGGACTGAGATGCATGGAGACCCAAGATCGATAGATAATTGCAAGCACGTTTCTTCTCGAATAAAATGGGATGCATGTATGGTGTTGTTGTTTTCCACATGTTTGTACGGAGACATTTTAAGTATTACAAGACACTCTATGTACTCCCTCCGTTTCAAAATATAGGTCGTTTAAGCTTTTCTAAATTCATATATTTTGCTATGTATCTAGACATATATGTTATATCTAGATGCTTAGCAAACACTATGAACCTAAAAAACCAAAACAACCTACATTTTGAAACAGAGGGAGTATCATCTAAAGAATTGGTCCAATTTATCGAAATATTATTGGACCGATTCTTCTACATCTGCACTATAAAATTTGAAATATTCG | |||||||||
gi|198058316|gb|FL787464.1|FL787464 CCGF14866.b1 CCGF Panicum virgatum early floral buds + reproductive tissue (L) Panicum virga GTACTCCCTCTGTCCCAAATT EST sequence (targeted fragment marked with yellow): CAAACGACTTATAATTTAAAACAGAGGGAGTACAATATAGTGGTACACTCCTGCTCTTGGTTCCCACTGATACAAAGGATCAACTCATCTCATCTCGCAGCTAAAATGTACTTACTGCTTAATCCTACTGAATGGAGCACTACTAAAATACAACTACCATTGCAGTAGTGCTATACTGCATTTGTACATCGAGGAGTTACGATTAATGCCGTGTCCATTCACACGGTCTGCACTGCCCTGGCATCTTCCTGCGCGGCGGAGGCGGACGGTACGGTGAGCCGCTCGCCGCCGGGAAGGTCGTCCGCGTGGGCCTCCTCGGGGCACTCCAGCGCGCGCACGAACTGCACGAACAGCGGCCAGTGGCCCGGCGAGAAGAAGTCCGCGCCCATCCGCTGGTACGTGAACTGCCGCGGCCGGGTGCGCCCGGCGGACAGCCAGACGCCCGCGGACACCGCGCCGTCGCGCGCCACGGCGAGCGGCGCGCTCTCCGCGGCGAGCCGCGCGCCGTGCTCCGCGCAGGCGCCCTTGACCCGCGCCAGGGCCTCCTCCGCGGGGGGGTCGAGCCGCGCCCCCACGCCGCACGCGATCACCGTGCACCCGCGCCGCGCGAACATCGCGGCCACCGGGCCGTACCCGCCGTGGAGCCCCGCGGCGGCCTCCGCGGGGCGCGAGGACCCGCGCAGGAGCGGCACCCTGGCGGACAGCTCCACGGGCTGGCCGCCGAACGCCCTTGACGCCGCGGCCAGGACGCGGTCGCCGTGCACGAGGAGC | |||||||||
gi|198306669|gb|FL973749.1|FL973749 CCHY11864.g1 CCHY Panicum virgatum callus (N) Panicum virgatum cDNA clone CCHY11864 3', mRNA GTACTCCCTCTGTCCCAAATT EST sequence (targeted fragment marked with yellow): AAATATTTTGCCGGCCTGACTACAGTTCGCTTGAAATTTGGCAAAAACATGATTTTTATTATCAGTTATTTGGGATAGGGGGGGTAATTATGTTATTGGATTTTTCCTTTGTTCATGTGTGAAAAATTTTTTAGAACCCATTTTTTCTGTTTTAAAAAAAGTTCTTTGTA | |||||||||
gi|304502538|gb|HO299150.1|HO299150 CFCA5610.g1 CFCA Panicum virgatum Sunburst normalized leaf Panicum virgatum cDNA clone CFCA5 GTACTCCCTCTGTCCCAAATT EST sequence (targeted fragment marked with yellow): ACCTGGACGAAGGCGACCTCGTGCTCGACAGCGCCCAGAGCGGCGCCAACGTCGCCCAGTGCATCAGGGTTGTGATCGAGCCCCTGGTCGCGCACCATTTTGGCGAGCACATACTCGACGATCTCTTCGAGATTTATGCGCGGAACGTCGCGGCGCACCTCCGGAAAGTGAAGACCAAGTACCCTGTCATCGTCCTGTCCTTGGCGGCGAGGCGCGCGCCCAAGTACCAAACGAATGGCGATTGCTATTCGCTTTTCACACGAGGCCAGTTAATGTAGAAATGACTAATAATTTGGGACAGATGGAGTATATAAAATGCAGCTACAGAATATATATAGTTCGTGGACAATTAGTAGTAGCGAATAGTTCCTCCACTGCTTTCTTTGGGTTTAGCTGGTTCAGCGTTTCCAAAATGTCAATCTATCAGGTTAAATATGTACCGTAATCTTAAGTGTCTAGGTAATGCCTTGTACTGTACGTAATCTCGAGTTAATATATTTGTCGGTACCCAGGACTGAGGTACCCCCTCTTGCTGTGTCTAGTCAAGAGTCTCATAGTTATCCT | |||||||||
gi|198081033|gb|FL806144.1|FL806144 CCGG5995.b1 CCGG Panicum virgatum late flowering buds + seed development (H) Panicum virgatu GTACTCCCTCTGTCCCAAATT EST sequence (targeted fragment marked with yellow): TAAGTGCCCTAAGTGCGGGAAGTCTACAGCACTGGATACGCCCATTGGGTACGCCCGACCAATAATATCTCTAAAAATAATTATTTGAAATAGCAAAAATTACATATTATGATAGTTGGTTTCACGATGAATGTGTTAATATTATTTTTATGTTGTCAATCTTTATGATTTTTTTACTATTTATAGTCAAAGTTAAAAATATTTGACTCAAGCTAAACCTAAACGTAGCTATATTTTAGGACAGAGCGAGTATTTTGTTTTTTCTTTGTGCAATTCGTGTTCACAGATTGGTTGGGCAACCTGATAAAAGTACATGCATGCTATGAAGTTTCACAATACTTATTTTTAGGGTTAATTGGATACGTGCTATTGTAATTGCCTCATTTCCAACATACAGTCATACACCATTACTATTTGTGATATTGGAAGCATGCCATTACAATTTACAGTTGTTCGAGATATGCCATCACGTACCCCTTCAACATATTTATAAAATTTTCATGACCAAATTACCCATGTCTTCTTCCTCGAGGTGCAAAGCATTGGACGCAGCCATGGCCTTCGGCCACTGCCTCATCCCGGTGCCGGACGCGAGCAAGGTCAAGCCGAAACACAGCGGCTGCATACGTGCGTGAGTGCAGTGGCGACGGACAAGCGGGGCTGGGGCGGAACGCGGCCTTGCTGTCGCGGCGGCGCCTACTAAAGAAGCACTCTCGCCCAAGCTAGAGTGGAAGGCCTGCGACTACGAGCAGG | |||||||||
gi|198344827|gb|GD012444.1|GD012444 CCHZ4826.g1 CCHZ Panicum virgatum abiotic and biotic stress treatments (N) Panicum virgatum GTACTCCCTCTGTCCCAAATT EST sequence (targeted fragment marked with yellow): TCTGAGGGTCCTAATAAGGAACGAAAAAGCCTTGCAACATCTTTTTTGCTAGCAATGAGGGAGAACAGGGTTGAAGGCATATTGGACTCTAGCATAATGAGTGCTGGAATGGAGGAATTGTTGCAAGAAGTTGTTGAGCTAGCCAGCATGTGCTTGCGTTTCAAAGGTGGGGAGAGGCCTTCCATGACTCAAGTGGCCGACAAGCTAAGAGCTGTACGAAGCAATTGGAGAGAGATATTATTGTTGAAGCAGGAAGAGACTCAGCGCCTAATTGAGAGGTTGAGCATGGATCCGGTATGTGACCTGTCACCTAGCATGTCCTATACGGCACAAATGTTGGGGCTGGATATCGAAACGCCAACCACATACTATACCGGGACCACCAGCAATCCCATCTGATGGCACCGAAATGTCATTTAGGTGATATTGTAGTCTCATCATCAGTGGTGTAAAGGTTACGCAGCAGCGCAATTACTTTCTACTATTATAGGTCGTTTTTGTTTTTATTGATATATAATTTTTATATGTATCTAAACATAACGTAGATCTATGTACATAGAAAATTATGAAGCTAGAAAATCTAAAACGATTTGTACTTTGGAATAGAGGAAGTACATACATACATCTTTGCTGAGATGTTTGTGCAAAAAAAAAAAAAAACAAA | |||||||||
gi|198173642|gb|FL886569.1|FL886569 CCGN6809.g1 CCGN Panicum virgatum etiolated seedlings (L) Panicum virgatum cDNA clone CCGN68 GTACTCCCTCTGTCCCAAATT EST sequence (targeted fragment marked with yellow): GCACACGCCTCGTTCTGTGCACGGAGAGCTCTCACCTGTACATGTGGACACCGTCTGGTGCCTGCTGTGTAAATATCCCCTTGCCGAATTTCCGGATCGTCGACTTGAAGTGGAATTCAGATGGGAGATGCCTACTCCTGAAGGACCGTGAGTTTTTCTGCTGTGCTGCAATTGTATCTGCCCTGCCTGAGGAAGGACCTGATCAATCTGATGAAAGTTCTGAAGATGATGAATGATCTCTTCATATGCGTTGCTTCTGCATAGTGGAACTGGAGCCAGCAGTGGAGAGAGCTACGTTGTATGACATACTAGCAGTAGGTGAATTCGTGGCGCCAACTTACTGTAATCGGTGTAGGCGGAAAGATGAATGCTTCTTTCATCTCTAAACTCCTCGTACAGATGATGCTACCGTTCTACTCCATCCGTTCCAAATTGTAGGTCGTTTTTAACAAATCTAGATACATAATTTTTACTATGCATCTAGATAAGGACTATATTTAGATACATTTAAATTATGTATGTAGATTTTTCAAAAAGACCTACAATTTGGTATAGAGGGAATATATCATATTTCCGTGTATT | |||||||||
gi|304497175|gb|HO294594.1|HO294594 CFCA2340.g1 CFCA Panicum virgatum Sunburst normalized leaf Panicum virgatum cDNA clone CFCA2 GTACTCCCTCTGTCCCAAATT EST sequence (targeted fragment marked with yellow): CGGGACGTGATCAGGCAGAGCGAGGCGTTCGACATCAACCACATCCACCTCTTCGAGTCCAACTGGGATCCCCATGACGACCTGGACGACGGCGACCTCGTGCTCGACAGCGCCCAGAGCGGCGCCAACGTCGCCCAGTGCATCAGGGCTGTGATCGAGCCCCTGGTCGCGCACCATTTTGGTGAGCACATACTCGACGATCTCTTCGAGATTTATGCGCGGAACGTCGCGGCGCACCTCCGGAAAGTGGAGACCAAGTACCCTGTCATCGTCCTGTCCTTGGCGGCGAGGCGCGCGCCCAAGTACCAAACGAATGGCGATTGCTATTCGCTTTTCACACGAGGCCAGTTAATGTAGAAATGACTAATAATTTGGGACAGAGGGAGTATATAAAATGCAGCTACAGAATATATATAGTTCGTGGACTATTAGTAGTAGAGAATAGTTCCTCCACTGCTTCCTTTGGATTTAGCTGGTTCAGCATTTCCAAAATGTCAATCTATCAGGTTAAATATGTACCGTAATCTTAAGTGTCTAGGTAATGCCTTGTACTGCACGTAATCTCGAGTTTATATATTGAAAAGTTCCG | |||||||||
gi|304549422|gb|HO339232.1|HO339232 CFHF1289.b1 CFHF Panicum virgatum U601 normalized leaf Panicum virgatum cDNA clone CFHF1289 GTACTCCCTCTGTCCCAAATT EST sequence (targeted fragment marked with yellow): TGGCAGAGGACCCATTGCTGGCTAGCACCTTGAGAGATCTGCGTGAGTTGATTGCAGAGAACCGATCAGGATTTGGAGCAATGGCTAGCATCGCTAGCCTTTTCATGTGGGCCACAAACTTTGTTTCAAGGCGCAGTAAGAAACGCTTATAATTTTTTTGAATAAAACGAGTGGTCAAACTTAGTGTCAAAAAAGTCAAACAAGTTATAATTTAGAACAGAGAGAGTATCAAATAGACACGATTTGAACTAGTGCACTAGCTTAACCATGGGAGGCAGGTGGCCTTAGGCGGCGGCCGCGAGCTCTACTACTTTTGATTTTTTTTTTTGGATATGTTATGAACAAATAGCCACAAGATCTGTGTAAAATTTATAACAAATTGATAATTTTGCACGT | |||||||||
gi|198099022|gb|FL826537.1|FL826537 CCGH7266.b1 CCGH Panicum virgatum late flowering buds + seed development (L) Panicum virgatu GTACTCCCTCTGTCCCAAATT EST sequence (targeted fragment marked with yellow): CAGATACAAATTGAGATGCAATGGAGAACTTCCTAGACGGAATTGGTACTAGAAATGTAACATCTCTAAAATATTTGATTGGCTCTATGCATTTTCATTTACAATGTCTTCATGGTACTTGGTATTGATATAATTTGTTGGATCTCATTAGAAGCTAAAACAACACTCTTTGCACTTATTTTGGGACAGAGGGAGTAGGTGTGTTAATGTGTTACTGACCCCTGGAAAACGAACTCGAACTTATTCTGTGACTACTACAGATCCATACAAGTATACTTCGGCATTCTGTC | |||||||||
gi|304475403|gb|HO273195.1|HO273195 CCTZ2523.g1 CCTZ Panicum virgatum Pathfinder normalized leaf Panicum virgatum cDNA clone CCT GTACTCCCTCTGTCCCAAATT EST sequence (targeted fragment marked with yellow): GAAGTCACATCGTCGAGCCACCCCATCCACTCAGATGACCAACCTAGCTGTCCCGACAAGCATGCTTCCATCGCCACCGTGCCTAGATAGCCGCACATGAAGGCATGCAATGAGGAGAGAGGTTGAGGTGGTGACGGCGAGCAACTCGGTGATGGCGTCTTGGAGCTCTACCGAGGATAAGGGAAACGAGAGCTATGGGTGGCTCAGTTGGGGAGGCCCGGGAGCTCGAGCCAAAGGTCACGAATGGTGGCGTCAACAGCGGATGATTGTGTTGTGGTGCGTATCCAGGACGAGAAGCAGCTAGGTTGACGCGGAGCGTCCAGGTGAGCCTTAGGCCCGGCTGTTATAGGGAGCAGAGGGGGGAATGAACGGTGGAGAAGCTGGGCTATGTGTGCCATCAATGGCAAGACTCAGCATGCCACACCACTGGGGTGCTCGATGAAATGTCAATTAGAGGAAGGTGAAAGCATGGTGATAAGGCTACCGGATTTCAGTGCTAAGTAATCATAGCTATTTGGGTCAAAAATCAAACACGATCTGAGTTGAATTGGGCATCAAGACCAAGTGAAATAAACACACTCTCAAAAAAGTCGAAATAACTTATAGTTTGAGATAGAGGAAGTATTATGTTATGGTGTGTAGCTCAAAAATATTGAGCATGACTTTAGAGAAATTAAATCTATTTTGTATTCTTTTAGTTAAAACAACATTTTATATTTTTTAGATACTAAATAGATTTTACTATTTTATATTC | |||||||||
gi|304507424|gb|HO306782.1|HO306782 CFCB5033.g1 CFCB Panicum virgatum WS4U normalized leaf Panicum virgatum cDNA clone CFCB5033 GTACTCCCTCTGTCCCAAATT EST sequence (targeted fragment marked with yellow): ACGCTGCTCCAACGCACTCAGGTGCCATTTTGTACATGATGAAGAAACAGCCGATCCCTTTTCTGACACTGAACCGTGCACCAACGGTAGTCTCGACTTTGTGGTGACTGGTGAAGTACTTATTTTGTCAGAGAGACCTGAACGAAATCCGCTGACTCTTCGAGGGGAAGGAAAGCCGGTACCTTTTGCAATGTGTTCGTCTCATGCGTATGAATTGTACTCCCTCCGTTCCATGTAGGTGATTTTGGCTTTTCTAGGTTCATAGATATTATTATGCATCTAGACAAACACTATATCTAGATGCATAGTAAAAATTATGTAGCTAAAAAAGCCAAAACGATCTACAATTTGGAAATTTGGAACAGAGGGAGTACTAAAGAACTCATACCGCCGACTGCTGAGTACGGTTCAAAATAGCCTTGGTTGCATGAGCTTGTAAATTACAATTGTAATATCCTCATTTTATTTGACAGTCTCACCGTGAACCATTTTCTTGTAAAAGCCTGTTTGGAAGACTACTAATTCTACTAATTCTAGGATTTATTGAGATTTGT | |||||||||
gi|198143974|gb|FL859125.1|FL859125 CCGI5698.b1 CCGI Panicum virgatum etiolated seedlings (H) Panicum virgatum cDNA clone CCGI56 GTACTCCCTCTGTCCCAAATT EST sequence (targeted fragment marked with yellow): GCGCGATGCTAGAGGAAGGCTCAGGGGCGACCATGTCGGAGGATGAGGACGAACCACCGATGCTGGAGGGGGCACTGGACATGGGCTCGGATGGGCACGACATGATGGGCTTCGGCCCGCTCCTGCCCACCGACTCCGAGCGCTCCCTCATGGAGAGGGTCAGGCAGGAGCTCAAGATCGAGCTCAAGCAGGTGAAAAAAAAGAAGGCATTCTTTGAACTGAATTTGAAGCTGGTTTAACTTTTACATCAAAATTTGCCAAAACAACTTACAATTTGGAACAGAGGGATTAGCAAATAAAGTGAGATTTAAGGCTTTAAGCTGATGTGAGGTCCCTGTCGAATTCGTTGCAGGGTTTCAAGTCAAGAATAGAGGATGTGAGGGAAGAAATCCTTCGGAAAAGGAGGGCCGGGAAGCTGCCTGGGGACACCACCAGCATCCTCAAGCAATGGTGGCAGCAGCACTCCAAGTGGCCATACCCCACGGTGAGTGCATTGTAGCTATCATGCATGCATCCAAGAATGCAACCAGCCATCTGCTGCCTGCTACTGATGATGCATGGTGTGGTTGCTCTCCACATATTAGCTGTTCTCCATCGTCCAACTTGCTGACTAAGCTTGGCAAATATTCCTCGTGGCTTTTAATTATATGTATGGTTGCTAATGAGTTCTCTCGGGAAGGAAATTAAAAAAATTATGTGGGTTTTAATCAAAGTATATCATGTACGCTTCACATCCTAAAGATGATATCTTTTGAGT | |||||||||
gi|304548943|gb|HO347601.1|HO347601 CFHF768.g1 CFHF Panicum virgatum U601 normalized leaf Panicum virgatum cDNA clone CFHF768 3' GTACTCCCTCTGTCCCAAATT EST sequence (targeted fragment marked with yellow): AACCTAGCTACCATGGCCTATTTTGAGAGCCGTCGTGAAGGAGACACTAAGGCTGCACCCCCCTGTTCCCCTCCTCCTCCCTCACCTCTCCATGGCAGACTGTGTCGTCGACGGCTACACGATCCCCTCCGGCACTCGGGTCATCGTCAACGCATGGGCTATTAGTAGGGATCCAAAGTCATGGGAGGAGCCAGAGGAGTTCAAGCCGGAGAGGTTCATGGACGGTGGGAGTGCTGCGGCCATCGACTATAAAGGGAACGACTTTCAGTTTGTGCCATTTGGGGCTGGAAGGAGGATCTGTCCTGGCCTTAACTTTGGTTTAGCTACTGTTGAGATCATGCTGGCAAACCTCGTGTATTGTTTTGACTGGCAGCTGCCAAACGGCATGGAGGCCAAGGATATTGATTTGACAGAGGTGTTTGGAGTGACAGTCCGTCCAAAGGAGAAGCTCATACTATTTCCAAAACCACGTGGTGGAATTGCTGAGCCCCTGCTAACTGAGTGATTGATCTTTTTATCACCCCATGTATGCATATCCTGTATAGCAGTTATAATATACTCCCTTTGTGATTTACATAGATTTTGTTACGCATCTAGACATAATATATATCTAGGTGCATAGCAAAATCCAAAACGACTAATAATTTAAGATAGAGGGAGTATGCAATAGTGCTGCCTTAACTAGCTATTGTGTAGGTACAAACACAATGCATACATCCCCGTTCACCTT | |||||||||