| mature miRNA: TAGCCAAGGATGACTTGCTTA species: Panicum virgatum database: miRNEST The numbers on the right side of the alignments show a score calculated for them. When calculating the score, a mismatch is given a score of 1, bulge: 2, and wobble: 0.5. |
| Predicted miRNA targets | |||||||||
gi|169701509|gb|FE630514.1|FE630514 CBYY9253.g1 CBYY Panicum virgatum Kanlow crown Panicum virgatum cDNA clone CBYY9253 3', mRNA TAGCCAAGGATGACTTGCTTA EST sequence (targeted fragment marked with yellow): GAAGACGTGCCAAACAACTTTAGTGCCAGCAATGTGGCCGCCACAAATTACATGGCCCTGCCGCCTGATAGAGAACTTTCTACTGATGATTTTATAGAACTGAATGATCTCCTTGCTTCTGATCCAAGCTTCCCCAGTGAATTTCCTGCACAAAACAGTCAATTTATGCAGTATCCTCCAGCTCAGCCCACTTACAATGGACATTACGATGTAGCTGCTCTGCCAGGTCCTGTGGAACCAACAATGCCAAGCATTTTCAATGTTTTTCCTCCTGATAACGGCAGCTTCACTGCAGATGAGGCAGCCAACTTTTCGTACCCAAGCATGCAGTACCCATTCCCATGATTGGTCTGCAAGTGTCAAGTTATTTGATGCTGGTGCAACTCTTAATCCACCATGGATGTCTGGAAAGACTTCTTTTTCATGAAAGTTTGCTGCCCTTTTGAACCAAGCCATTCTTGGCTAGTGTCGATCGCAAGCACAGTGCTGGATCAGACTTAATTGGGTACTGCTTGCTCCCAAGTCCCAACTGGTTGAGCTGATTGCCAAGCTCATCTTTTTTGCTGAGGATGAATAAGTACTTGGCATGTAAATCTTTGCTTATGTTATCTGTGGGTATTCGCTTCGTGCTTGGTTGCCCTCCTTTAAGAAGACATTTCTGTCAAAACTAGTGTGGATGTCGAGAATATTCGAACCATTGTTAATAATTGCAATATCTCTTGAGTTGGTGGTT | |||||||||
gi|304536953|gb|HO333266.1|HO333266 CFHC3519.b1 CFHC Panicum virgatum U518 normalized leaf Panicum virgatum cDNA clone CFHC3519 TAGCCAAGGATGACTTGCTTA EST sequence (targeted fragment marked with yellow): TAAAGTGCTGCTCTCTGTCTGTGCTGAATATGGAGCTAGGGTAGCGATAGATACCTCCTCCTCAGGCCTGGAGTACCAAACGGATGGCTGGAGTCGATGGAATCTGGAAGGATGTCTTTCTTCATTGAAAAGTTCAAAGCCATCATTTTCTGTAGTCCTGCTGGGAGAGCTGTCGTTTCAGTTGATCGCATCAGGGCATGACTTTGGGTTTGTGGTTTTGAGCGACTCATCCTTGGCTGACACATTTCATAGTTTCCCTAGCTTGAGTCGGCCGCACAGCACATTGAAGTACACTTTCAAGAAGCTACTTGGCCTGAAGAACCAGAAGGATCAGCATTTCTCCGATCTAATGGTGGAGCAGCAGGAGGAGCTGAAGAGTCGTTCCAACCACTTAATTATGACGCTGCAGGGCTGTGGCTGGGACGTTGCCAGCGGTTGCGGTGGCATCTCGATGCTAGCCAAGCCGACTGCCTACATCGGGAAGTACTTCAAAGCTGATGGCTTTGAGGGCAAGCTGGATGCGAGCAACATCAGGGAAGCCATCCTCAGAGCCACGGAGCTGTGCATAAACAGCAGCTCGTGGACCGGGATACCCGACTACTGCCGGTTCAGCTTTGCACTGGAGAGCAGCGAAATTGAGCGCGCAATGGGATGCATAACTCGGTTCAAGGAGTTGGTTCTTGGAGGCGATGCCCAGCTCAGATGAACGGTAACTGACGA | |||||||||
gi|198110116|gb|FL836391.1|FL836391 CCGH19493.b1 CCGH Panicum virgatum late flowering buds + seed development (L) Panicum virgat TAGCCAAGGATGACTTGCTTA EST sequence (targeted fragment marked with yellow): TTTCAATGTTTTTCCTCCTGATAACGGCAGCTTCACTGCAGATGAGGCAGCCAACTTCTCGTACCCAAGCATGCAGTACCCATTCCCATGATTGGTCTGCAAGTGTCAAGTTATCTGATGCTGGGTGCAACTCTTAATCCACCATGGATGTCTGGAAAGACTTCTTTCTCATGAAAGTCTGCTGCCCTTCTGAACCAAGCCATTCTTGGCTAGGTGTCGATCACAAGCACAGTGCTGGATCAGACTTAATTGGCTACTGCATGCTCCCAAAGTCCCAACTGGTTGAGCTGATTGGCCAAGCTCGGCTTTTCTGCTGAGGATGAATAAGTACTTGGCATGTAAATCTTTGGCTTATGTTATCTGTGTGTATTCGCTTCGTGCTTGGTTGCCCTCCTTTAA | |||||||||
gi|198229745|gb|FL946594.1|FL946594 CCGP14643.g1 CCGP Panicum virgatum root (L) Panicum virgatum cDNA clone CCGP14643 3', mRNA s TAGCCAAGGATGACTTGCTTA EST sequence (targeted fragment marked with yellow): TCTTCACGAGTCTCGCCACCTCCACGCAATGCGCCGGGCAAGAGGCTCCGGCGGGCGCTTCCTCAACACGAAGAAAGAAGGGGGCTCGAGTGCGAACGGCGCCAGCAAGACGGTGTCAGCGGCGCCGGCTGCGCGCCTCGCCACGTCTCCCAGCACCGAGCCTCGACGGGTGCCGGGGCTCGGCAAGGGCAGTGACGGCAGCAACCCGCGCTGCCAGTCCCGGAGCAGCGTCTCCAGCCTGTCCGGCTCCGAGGTGTCGAGCATCTACGACGACCATGCGAGCCGCCACCAGTACGGCGGCATGGAGCCGCACCTCCGGGCGCCGTCCTTCTTCACCCCGCTGCCGGCCATCATGGACGGCGACCACGGCGGGGCTGCCGCCATCCCCTCCTTCAAGTGGGCAGCCAGCGACGGCTGCTGCGAGCTCCTCAAGGCGTGAACCGAGGAGGGGATGACTACTCAGACGGCCGGCCTTCTCCCCGTTGGCTGGCTGTCTGTAGGCAAATCATTCTTGGCTGTTCTGCAATGGGGTGCGATCCTCCTCATCACCTAGCTACCTAACCATGTCCCTGAAACTCATACGGTGCTGGGTTTCAGGGGTCCTGTGATGCTGGAGCACCCCCATATGCCTGTAACATAGTGTACCCAAAAGCACTGCTGCTTGGTACTGCTTGTTGATAGCAGTGTCTCAGTACGGAATTCTGTGATGTCAGGTCGATCAGTGTCTGAATAATTGAGGTGTCAGACTTGCAC | |||||||||
gi|198184665|gb|FL897098.1|FL897098 CCGN12912.g1 CCGN Panicum virgatum etiolated seedlings (L) Panicum virgatum cDNA clone CCGN1 TAGCCAAGGATGACTTGCTTA EST sequence (targeted fragment marked with yellow): CCAAGCATTTTCAATGTTTTTCCTCCTGATAACGGCAGCTTCACTGCAGATGAGGCAGCCAACTTCTCGTATCCAACCATGCAGTACCCATTCCCATGATTGGTCTGCAAGTGTCAAGTTATCTGATGCTGGTGCAACTCTTAATCCACCATGGATGTCTGGAAAGACTTCTTTCTCATGAAAGTCTGCTGCCCTTCTTAACCAAGCCATTCTTGGCTAGTGTCGATCGCAAGCACAGTGCTGGATCAGACTTAATTGGCTACTGCATGCTCCCAAGTGCAGCGGTAGAGCCTACCGTCTGTAACCGGAAGGTCCCGGGTTCGAGCCCCAGTCTCTGCACATTTGTGTGGGTAAGGCTTGGGGCTTAAAGACAATCCTTCCCCAGACCCCGCGCAGTGCGGGAAGCCTACGGCACTGGGTACGCCCTTTTTTATGCTCTCAAGTCCCAACTAGTTGAGCTGATTGCCAAGCTCGGCTTTTCTGCTGAGGATGAATAAGTACTTGGCATGTAAATCTTTGCTTATGTTATCTGTGTGTATTCGCTTCCTGCTTGGTTGCCCTCCTTTAAGAAGACATTTCTGTCAAAACTAGTGTGGATGTCGAGAATATTCGAACCATTGTTAATAATTGCAATATCTCGAGTTGGTGGTTGCTTTGCTGGTTGCTCTCTGCACTATGTTCCTAAGTTCCATTATGAGTTATAAAAAAAAACTCCATTCTGAGC | |||||||||
gi|197974850|gb|FL717204.1|FL717204 CCGB3732.b1 CCGB Panicum virgatum apex + stem (L) Panicum virgatum cDNA clone CCGB3732 5', m TAGCCAAGGATGACTTGCTTA EST sequence (targeted fragment marked with yellow): GCTGGCTGTCTGTAGGCAAATCATTCTTGGCTGTTCTGCAATGGGGTGCGATCCTCCTCATCACCTAGCTACCTACCCATGTCCCTGAAACTCATACGGTGCTGGGTTTCAGGGGTCCTGTGATGCTGGAGCACCCCCATATGCCTGTAACATAGTGTACCCAAAAGCACTGCTGCTTGGTACTGCTTGTTGATAGCAGTGTCTCAGTACGGAATTCTGTGGTGTCAGGTCGATCAGTGTCTGAATAATTGAGGTGTCAGACTTCACAGTTGCTCCAGTTCTTGGAGGTGTGTCTGGGTCTGTTTGAAGCTTTGAGGTCTGAAACTTTGTGCTCGGTGAAGATACTGTGCTAATATGTAAGTCTGGGACCTACGTTCTGTTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACC | |||||||||
gi|198069603|gb|FL797542.1|FL797542 CCGG1400.g1 CCGG Panicum virgatum late flowering buds + seed development (H) Panicum virgatu TAGCCAAGGATGACTTGCTTA EST sequence (targeted fragment marked with yellow): GTGATGCTGGGTTAGAAGACGTGCCAAACAACTTTAGTGCCAGCAATGTGGCCGCCACAAATTACATGGGCCTGCCGCCTGATAGAGAACTTTCTACTGATGATTTTATAGAACTGAATGATCTCCTTGCTTCTGATCCAAGCTTCCCCAGTGAATTTCCTGCACAAAACAGTCAATTTATGCAGTATCCTCCAGCTCAGCCCACTTACAATGGACATTACGATGTAGCTGCTCTGCCAGGTCCTGTGGAACCAACAATGCCAAGCATTTTCAATGTTTTTCCTCCTGATAACGGCAGCTTCACTGCAGATGAGGCAGCCAACTTCTCGTACCCAACCATGCAGTACCCATTCCCATGATTGGTCTGCAAGTGTCAAGTTATCTGATGCTGGTGCAACTCTTAATCCACCATGGATGTCTGGAAAGACTTCTTTCTCATGAAAGTCTGCTGCCCGTCTGAACCAAGCCATTCTTGGCTAGTGTCGATCGCAAGCACAGTGCTGGATCAGACTTAATTGGCTACTGCATGCTCCCAAGTCCCAACTGGTTGAGCTGATTGCCAAGCTCGGCTTTTCTGCTGAGGATGAATAAGTACTTGGCATGTAAATCTTTGCTTATGTTATCTGTGTGTATTCGCTTCGTGCTTGGTTGCCCTCCTTTAAGAAGACATTTCTGTCAAAACTAGTGTGGATGTCGAGAATATTCGAACCATTGTTAATAATTGCAATATCTCTTGAGTTGGTGGTT | |||||||||
gi|198110117|gb|FL836392.1|FL836392 CCGH19493.g1 CCGH Panicum virgatum late flowering buds + seed development (L) Panicum virgat TAGCCAAGGATGACTTGCTTA EST sequence (targeted fragment marked with yellow): CAAAACAGTCAATTATGCAGTATCCTCCAGCTCAGCCCACTTACAATGGACATTACGATGTAGCTGCTGTGCCAGGTCCTGTGGAACCAACAATGCCAAGCATTTCAATGTTTTTCCTCCTGATAACGGCAGCTTCACTGCAGATGAGGCAGCCAACTTCTCGTACCCAAGCATGCAGTACCCATTCCCATGATTGGTCTGCAAGTGTCAAGTTATCTGATGCTGGTGCAACTCTTAATCCACCATGGATGTCTGGAAAGACTTCTTTCTCATGAAAGTCTGCTGCCCTTCTGAACCAAGCCATTCTTGGCTAGTGTCGATCACAAGCACAGTGCTGGATCAGACTTAATTGGCTACTGCATGCTCCCAAGTCCCAACTGGTTGAGCTGATTGCCAAGCTCGGCTTTTCTGCTGAGGATGAATAAGTACTTGGCATGTAAATCTTTGCTTATGTTATCTGTGTGTATTCGCTTCGTGCTTGGTTGCCCTCCTTTAAGAAGACATTTCTGTCAAAACTAGTGTGGATGTCGAGAATATTCGAACCATTGTTAATAATTGCAATATCTCTTGAGTTGGTGGTTGCTTTGCTGGTTGCTCTCTGCACTATGTTCCTAAGTTCCATTATGAGTTATAAAAAAAACTCCATTCTGAGC | |||||||||
gi|169683643|gb|FE611729.1|FE611729 CBYX10309.b1 CBYX Panicum virgatum Kanlow callus Panicum virgatum cDNA clone CBYX10309 5', m TAGCCAAGGATGACTTGCTTA EST sequence (targeted fragment marked with yellow): CAAGTCTAACCCTAGATCCGGACCGCTCTCCGGCGATCTCCGGTCATGGCGTCCCGCCGGGTCGTCTCCTCCCTCCTCCGCTCCGCCTCCCGCATCAGGGCGGCCTCACCCGCCGTGCCGCGCCCGCGCGCGCCGCCGCACCGCCCGTCCCCGGCAGGGTACCTCTTCAACCGCGCCGCCGCCTACGCCTCGTCCGCCGCGGCCCAGGAGAAGCCCGCCGCCCCGCCGCCGGCCACCGGGAAGACCGGGGGCGGCAAGATCACCGACGAGTTCACCGGCGCCGGCGCCATCGGGCAGGTGTGCCAGGTCATCGGCGCCGTCGTCGACGTGCGCTTCGATGAGGGCCTCCCGCCCATCCTCACCGCGCTCGAGGTTCTTGACAACAACATCCGCCTCGTGCTAGAGGTGGCGCAGCACCTTGGCGAGAAAATGGTGCGCACCATCGCTATGGACGGGACTGAGGGGCTCGTCCGCGGCCAGCGCGTCCTCAACACCGGCTCCCCCATCACCGTGCCTGTTGGCAGGGCTACACTTGGACGCATTATGAATGTTATTGGTGAGCCAATTGATGAGAAGGGTGACATAACGACAAACCACTTCCTCCCGATCCATCGTGAAGCCCCTGCATTTGTTGAGCAAGCCACTGAGCAAGCAATTCTTGGTTACAGGAAATAAAGGTTGTGGATCTTCTTGCACCCTACCAAAAGGGGAGGAAAGATTGGTCTTTTTGGGG | |||||||||
gi|198082948|gb|FL811737.1|FL811737 CCGG12511.g1 CCGG Panicum virgatum late flowering buds + seed development (H) Panicum virgat TAGCCAAGGATGACTTGCTTA EST sequence (targeted fragment marked with yellow): ACGAAGATGCTGGTGGAGACGGCAAGGCAATGTTCAGCAACCCGCTTATGCGCCAGGTGGCATCTCCAAGTTCAGAGATCCAGCAGTCAGACCTGGGCAACCCGAGCAGCGTCTCCAGTCTGTCGGGATCAGAGGTGTCAAGCATATATGATCATGAAGATGTGGATCACTTCCACAGCTTTGATCACATCCGCACTCCTTTTTTCACCCCGCTCCCGAGCATCATGGGCAGTGAGCATGGGGTCGGTAACCCCTTCAAGTGGCCAATAGCCTCTGAAGGCTGTTGTGACCTCCTCAGAGCATGACTAGAGGGGTTACCGGACAGCCGAATGCTAGGAACTGGCGACAACCAGCAGATGCTGCTGGATGTTACCAGCTCCGGGCCAGGGATTGTCCCTCCCATCGTTTGGCTGTCGGTAGGCAATTCATTCTTGGCTGAAGGCATTGTGGTTGTCTCTGCTCATCGCCTAATTCTCCTAGAATTTCTATTTCTGGGATCTTGTGATGAGTGGAACACCCGTGCCCCCAAAAATGCTGGTAGTACTAAGCTTCCAGCATCAAACTCGTTCTGCACTAGCAGGTTTCAGTGTTGTTTTCTGAATAAAGCCTGAAACTTTGGACTCGTCTGAAGTTTCAGAGGTACTGGAAGTGGATTATGTTTGGAATCTGATTGTGTGTCAAGACTTGGCTTTGTTAGTGATGAATTGTGATGTGCTTGAAGCTTGTGTGGACATGGTTTGTAATATGTGGTTTGTTGAAAGTTTGAACTCGGT | |||||||||
gi|198027180|gb|FL769869.1|FL769869 CCGC9825.g1 CCGC Panicum virgatum early floral buds + reproductive tissue (H) Panicum virgat TAGCCAAGGATGACTTGCTTA EST sequence (targeted fragment marked with yellow): AATGAAAGTCTGCTGCCCTTCTGAACCAAGCCATTCTTGGCTAGTGTCGATCGCAAGCACAGTGCTGGATCAGACTTAATTGGGTACTGCATGCTCCCAAGTCCCAACTGGTTGAGCTGATTGCCA | |||||||||
gi|304537907|gb|HO335948.1|HO335948 CFHC4948.g1 CFHC Panicum virgatum U518 normalized leaf Panicum virgatum cDNA clone CFHC4948 TAGCCAAGGATGACTTGCTTA EST sequence (targeted fragment marked with yellow): GCTTCTGATCCCAAGCTTCCCCAGTGAATTTCCTGCACAAAAACAGTCAATTTAATGCAGTATCCTCCAGCTCAGCCCACTTACAATGGACATTACGATGTAGCTGCTCTGCCAGGTCCTGTGGAACCAACAATGCCAAGCATTTTCAATTTTTTCCTCCTGATAACGGCAGCTTCACTGCAGATGAGGCAGCCAACTTCTCGTACCCAACCATGCAGTACCCATTCCCATGATTGGTCTGCAAGTGTCAAGTTATCTGATGCTGGTGCAACTCTTAATCCACCATGGATGTCTGGAAAGACTTCTTTCTCATGAAAGTCTGCTGCCCTTCTGAACCAAGCCATTCTTGGCTAGTGTCGATCGCAAGCACAGTGCTGGATCAGACTTAATTGGCTACTGCATGCTCCCAAGTGCAGCGGTAGAGCCTACCGTCTGTAACCGGAAGGTCCCGGGTTCGAGCCCCAGTCTCTGCACATTTGTGTGGGTAAGGCTTGGGGCTTAAAAGACAACCCTCCCCCAGACCCCGCGCAGTGCGGGAAGCCTACGGCACTGGGTACGCCCTTTTTTTTTATGCTCTCAAGTCCCAACTGGTTGAGCTGATTGCCAAGCTCGGCTTTTCTGCTGAGGATGAATAAGTACTTGGCATGTAAATCTTTGCTTATGTTATCTGTGTGTATTCGCTTCCTGCTTGGTTGCCCTCCTTTAAGAAGACATTTCTGTCAAAACTAGTGTGGATGTCGAGAATATTCGAACCATTGTTAATAATTGCAATATCTCTTGAGTTGGTGGTTGCT | |||||||||
gi|198315356|gb|FL980235.1|FL980235 CCHY15419.b1 CCHY Panicum virgatum callus (N) Panicum virgatum cDNA clone CCHY15419 5', mRNA TAGCCAAGGATGACTTGCTTA EST sequence (targeted fragment marked with yellow): TTTCTATACAGTGACAGTGACATTCAAGAGCTGCTCTGTGTCTGCGCTGAATATGGAGCTAGGGTAGTGATAGATACCTCCTTCTCAGGCCTGGAGTACCAAACGGATGGCTGGAGTCGGTGGAATCTGGAAGGATGTCTTTCTTCTTTGAAAAGTTCAAAGCCATCGTTCTCTGTAGTCCTGCTGGGAGAGCTGTCCTTTCAGCTGATCGCATCAGGGCATGACTTTGGGTTTGTGATTTTGAGCGACTCATCCTTGGCTGACACATTTCATAGTTTCCCTAGCTTGAGTCGGCCGCACAGCACATTGAAGTACACTTTCAAGAAGCTACTTGGCCTGAAGAACCAGAAGGATCAGCATTTCTCCGATCTAATGGTGGAGCAGCAGGAGGAGCTGAAGAGTCGTTCCAACCACTTAATTAAGACGCTGCAAAGCTGTGGCTGGGACGTTGCCAGCGGTTGCGGTGGCATCTCGATGCTGGCGAAGCCGACTGCCTACATAGGGAAGCACTTCAAAGCTGATGGCTTTGAGGGCAAGCTGGATGCGAGCAACATCAGGGAAGCCATCCTCAGGGCCACGGGGCTGTGCATAAACAGCAGCTCCTGGACCGGGATACCCGACTACTGCCGGTTCAGCTTTGCACTGGAGAGCAGCGAAATTTGAGCGCGCGATGGGATGCATAACTCGGTTCAAGGAGTTGGGTTTTTGGAG | |||||||||
gi|198004185|gb|FL749316.1|FL749316 CCGC3606.g1 CCGC Panicum virgatum early floral buds + reproductive tissue (H) Panicum virgat TAGCCAAGGATGACTTGCTTA EST sequence (targeted fragment marked with yellow): CGGCGCCATCAGCGCGCTCGCACGTCTCCTAGCACCGAGCATCCACGGGTGCCGGAGCTCGGCAAGGGCAACAACGGCAGCAACCCGCGCTGCCACTCCCGGAGCAGCGTCTCCAGCCTGTCCGGCTCCGAGGTGTCGAGCATCTACGACCACCACGACGACCACGCGAGCCGCCACCAGTACGGCGGCATGGAGCCGCACCTCCGGGCGCCTTCCTTCTTCACCCCGCTGCCGGCCATCATGGACGGTGACCACGGCGGGGCTGCCACCATCCCCTCCTTCAAGTGGGCTGCCAGCGACGGCTGCTGCGAGCTCCTCAAGGCGTGAACCGAGGAGGAGGGGATGGCTACTCAGACGGCCGGCCTTCGCCCCGTTGGCTGGCTGTCTGTCTGTAGGCAAATCATTCTTGGCTGTTCTGCAATGGGTTTTGAACCTCCTCATCACCTAGCTACCTACCCATGTCCCTGAAACTCGTACAGTGCTGGGTTTCAGGGGTCCTGTGATGCTGGAGCTCCCCCATAGTGTACCCAAAAGCGCTGCTGCTTGGTACTGCTTGTTGATAGCAGTGTCTCAGTACGTAATTCTGTGATGTCAGGTCGATCAGTGTCTGAATAATTGAGGTGTCGGACTTCACAGTTGCTCCAGTTCTCGGATTGGAGGTGTGTCTGGGTCTGTTTGAAGCTTTGAGGTCTGAAACTTTGTGCTCGGTGAAGATACTGTGCTTAATGTGTAAGTTTGGGACCCGTTC | |||||||||
gi|198123003|gb|FL848744.1|FL848744 CCGH26720.g1 CCGH Panicum virgatum late flowering buds + seed development (L) Panicum virgat TAGCCAAGGATGACTTGCTTA EST sequence (targeted fragment marked with yellow): TCGACGGGTGCCGGGGCTCGGCAAGGGCAGTGACGGCAGCAACCACGCTGCCAGTCCCGGAGCAGCGTCTCCAGCCTGTCCGGCTCCGAGGTGTCGAGCATCTACGACGACCATGCGAGCCGCCACCAGTATGGCGGCATGGAGCCGCACCTCCGGGCGCCGTCCTTATTCACCCCGCTGCCGGCCATCATGGACGGCGACCACGGCGGGGCTGCCGCCATCCCCTCCTTCAAGTGGGCAGCCAGCGACGGCTGTTGCGAGCTCCTCAAGGCGTGAACCGAGGAGGGGATGACTACTCAGACGGCCGGCCTTCTCCCCGTTGGCTGGCTGTCTGTAGGCAAATCATTCTTGGCTGTTCTGCAATGGGGTGCGGTCCTCCTCATCACCTAGCTACCTACCCATGTCCCTGAAACTCATACGGTGCTGGGTTTCAGGGGTCCTGTGAC | |||||||||
gi|169668617|gb|FE600122.1|FE600122 CBYX2776.g1 CBYX Panicum virgatum Kanlow callus Panicum virgatum cDNA clone CBYX2776 3', mRN TAGCCAAGGATGACTTGCTTA EST sequence (targeted fragment marked with yellow): TTCCTCAACACGAAGAAAGAGGGGGGTGGCGCGAACGCGAACGGCGCCGGCAAGACGATGTCAGCGCGCCTCGCCACGTCTCCTAGCACCGAGCCTCCACGGGTGCCGGAGCTCGGCAAGGGCAACAACGGCAGCAACCCGCGCTGCCACTCCCGGAGCAGCGTCTCCAGCCTGTCCGGCTCCGAGGTGACGAGCATCTACGACCACCACGACGACCACGCGAGCCGCCACCAGTACGGCGGCATGGAGCCGCACCTCCGGGCGCCTTCCTTTTTCACCCCGCTGCCGGCCATCATGGACGGTGACCACGGCGGGGCTGCCACCATCCCCTCCTTCAAGTGGGTTGCCAGCGACGGCTGCTGCGAGCTCCTCAAGGCGTGAACCGAGGAGGAGGGGATGGCTACTCAGACGGCCGGCCTTCGCCCCGTTGGCTGGCTGTCTGTCTGTAGGCAAATCATTTTTGGCTGTTCTGCAATGGGTTTTGAACCTCCTCATCACCTAGCTACCTACCCATGTCCCTGAAACTCGTACAGTGCTGGGTTTCAGGGGTCCTGTGATGCTGGAGCTCCCCCATATGCCTGTAACATAGTGTACCCAAAAGCACTGCTGCTTGGTACTGCTTGTTGATAGCAGTGTCTCAGTACGTAATTCTGTGATGTCAGGTCGATCAGTGTCTGAATAATTGAGGTGTCGGACTTC | |||||||||
gi|304453281|gb|HO252109.1|HO252109 CCTW667.g1 CCTW Panicum virgatum Carthage normalized leaf Panicum virgatum cDNA clone CCTW66 TAGCCAAGGATGACTTGCTTA EST sequence (targeted fragment marked with yellow): CAGAAGGCTGTTTCTTCAGCTCCTGGCTTCACCGTGACTCCAATGTTGCACAGAGATGACGCCTTCTTCCAGCACCCAAGCCATCATCTCAGCTTCTCTGGCCATTTTGGGCAGGCAAGCGCGCAAGCCGGCATGCATAATGGGACTCAGCAAAGGGTTCCAGTTATGAGATGACAGTTGGCGAACCTTAGCTGGTGATCCAGGATTCTAGGGGTCCTCTCCTCGTCCGGTGTGGTCTCGGCCTCTCAGGCAATTCATCCTTGGCTTAGTCTCTGGTGTGTTAGAAGCTACCAAATGTATGACACCGTGTTGTGGTTTGCAGAGCCCATAAATAAGGGCTTGATGGTGAACACTGCTATTGTTACATCGGTGTGTACGTGTTAGAATAAACTCACACGCTTTATATGGTGATAGTTGTACGTTATGCTACACAGGTTTCAGTTTGCCCTTGTTTCTGTTAAAACAGTCTGACGTAGTATTATTGGTACAGATTATGTCTTCAAGACCTGTCTAGCTGCTTGTCAGAAGAGCTGTTTATAAGACTACTCCCAATGCTTTTTGATGTAGTCTTATATTTAGGAGTTGCATGGACTTGGAGCACAATGCACTGGGAGTAGCCGAATAAGAATCTCAACATCTCAATGTAACCTGTTACTTAGAAGTGATCCTCATTGTAACCTGG | |||||||||
gi|198161787|gb|FL876041.1|FL876041 CCGI9664.g1 CCGI Panicum virgatum etiolated seedlings (H) Panicum virgatum cDNA clone CCGI96 TAGCCAAGGATGACTTGCTTA EST sequence (targeted fragment marked with yellow): TCTCCAGTCTGTCAGGCTCAGAGGTGTCAAGCATATATGATCATGAAGATGTGGATCACTACCACCAGCTTTGATCACCTCCCGCACTCCCGTTTTCACCCCCGCTCCCGAGCATCATGGACAGTGAACATGGGGTCGGTATCCCCTTCAAGTGGCCAAACAGCCTCTGAAGGGCTGTTGTGACCTCCTCAGAGCATGACTAGAGGGGTTACTGGACAGCCGAATGCTAGGAACTGGCGACAACCAGCAGATGCTGCTGGGTGTTACCAGCTCCGGGTCAGGGATTGTCCCTCCCATCGTTTGGCTGTCGGTAGGCAATTCATTCTTGGCTGAAGGCATTGTGGTTATTTCCTCTTATCGCCTAATTCTCCTAGATATTCTATTTCTGGGATCTTGTGATGAGTGGAACACCCGTGCCCCCAAAAATGCTGGTAGTACTAGCTTCCAGCATCAAACTCGTTTTGCGCGAGCAGGTTTCAGTGTTGTTTTTCTGAATAAAGCTTGAAACTTCAGACTAGGTACTGGAAGTGGAGTATATTTCTGAGTCTGATTGTGTGTCAAGACTTGGCTTTTGTTAGTGATGAATTGTGGTGTGCTTGAAGCTTGTGTGGACATGGTTTGTAATATGTGGTGTGTTGAAAGCTTGAACTCAGTAATGTAATGATGTATTTGACTACTGAGACTTTGGGCTTGGTTTGT | |||||||||
gi|198321581|gb|FL990355.1|FL990355 CCHY20717.b1 CCHY Panicum virgatum callus (N) Panicum virgatum cDNA clone CCHY20717 5', mRNA TAGCCAAGGATGACTTGCTTA EST sequence (targeted fragment marked with yellow): TGAGCGACTCATCCTTGGCTGACACATTTCATAGTTTCCCTAGCTTGAGTCGGCCGCACAGCACATTGAAGTACACTTTCAAGAAGCTACTTGGCCTGAAGAACCAGAAGGATCAGCATTTCTCCGATCTAATGGTGGAGCAGCAGGAGGAGCTGAAGAGTCGTTCCAACCACTTAATTAAGACGCTGCAAAGCTGTGGCTGGGACGTTGCCAGCGGTTGCGGTGGCATCTCGATGCTGGCGAAGCCGACTGCTTACATAGGGAAGCACTTCAAAGCTGATGGCTTTGAGGGCAAGCTGGATGCGAGCAACATCAGGGAAGCCATCCTCAGGGCCACGGGGCTGTGCATAAACAGCAGCTCCTGGACCGGGATACCCGACTACTGCCGGTTCAGCTTTGCACTGGAGAGCAGCGAATTTGAGCGCGCGATGGGATGCATAACTCGGTTCAAGGAGTTGGTTTTTGGAGGCGATGCCCAGGCTCAGATGAACGGTAACTGACGGAACAGGCGGGCAGTTGGTCTATTGCCTCCATCCAATCCATCACCGTTCGGGGGGGGCAATCCATCCATTGTTTGAAAACTTTGCCTCAGTGCTATGAATCATTGTTCAGGAAATATCAAATATATGTAAAGGAATAACGGCAGCAAGAAATGCCTACTGTGAATTGAGTGTGTTGGCTACAAGCTGGTCTGAAGTTTGTTC | |||||||||
gi|198302597|gb|FL971818.1|FL971818 CCHY10786.g1 CCHY Panicum virgatum callus (N) Panicum virgatum cDNA clone CCHY10786 3', mRNA TAGCCAAGGATGACTTGCTTA EST sequence (targeted fragment marked with yellow): ATTAGCAGAGAACGAGCCGTATATGTGAATCCGAAACAATATCATGGTATACTTCGCAGAAGACAGTTCCGTGCTAAGTTAGAGGTTCAGAACAAGCTAGTCAAAGCACGAAAGCCTTACCTTCATGAGTCTCGGCATCTTCATGCAATGAAGAGGGCAAGAGGTTCGGGTGGACGATTCCTCAATACTAAACAGCTCCAGCAGCAGCCTCGCAATGCCTCCACCAGGTCCACCACAAATGGCACAGCAAGCTCCTCAGGTTCAACTCATCTACGGCTTGGTGGAGGCACAACTAGAGATCAAACTTTTTTTGGCACCCAAAGCAATGCCCTCACAAGACAATAGCAAGAAGGCTGTTTCTTCAGCTCCTGGCTTCACCGTGACTCCAATGTTGCACAGAGATGACACCTTCTTCCAGCACCCAAGCCATCATCTCAGCTTCTCTGGCCATTTTGGGCAGGCAAGCGCGCAAGCCGGCATGCATAATGGGACTCAGCAAAGGGTTCCAGTTATGAGATGACAGTTGGCGAACCTTAGCTGGTGATCCAGGATTCTAGGGGTCCTCTCCTCGTCCGGTGTGGTCTCGGCCTCTCAGGCAATTCATCCTTGGCTTAGTCTCTGGTGGGTTAGAAGCTACCAAATGTATGACACCGTGTTGTGGTTTGCAGAGCCCATAAATAAGGGCACTACAGGAGAGATGCTAATACAAGGCATTTT | |||||||||
gi|198073516|gb|FL799603.1|FL799603 CCGG2580.g1 CCGG Panicum virgatum late flowering buds + seed development (H) Panicum virgatu TAGCCAAGGATGACTTGCTTA EST sequence (targeted fragment marked with yellow): CAAAACAGTCAATTTATGCAGTATCCTCCAGCTCAGCCCACTTACAATGGACATTACGATGTAGCTGCTCTGCCAGGTCCTGTGGAACCAACAATGCCAAGCATTTTCAATGTTTTTCCTCCTGATAACGGCAGCTTCACTGCAGATGAGGCAGCCAACTTCTCGTACCCAACCATGCAGTACCCATTCCCATGATTGGTCTGCAAGTGTCAAGTTATCTGATGCTGGTGCAACTCTTAATCCACCATGGATGTCTGGAAAGACTTCTTCTCATGAAAGTCTGCTGCCCTTCTTAACCAAGCCATTCTTGGCTAGTGTCGATCGCAAGCACAGTGCTGGATCAGACTTAATTGGCTACTGCATGCTCCCAAGTGCAGCGGTAGAGCCTACCGTCTGTAACCGGAAGGTCCCGGGTTCGAGCCCCAGTCTCTGCACATTTGTGTGGGTAAGGCTTGGGGCTTAAAGACAATCCTTCCCCAGACCCCGCGCAGTGCGGGAAGCCTACGGCACTGGGTACGCCCTTTTTTATGCTCTCAAGTCCCAACTAGTTGAGCTGATTGCCAAGCTCGGCTTTTCTGCTGAGGATGAATAAGTACTTGGCATGTAAATCTTTGCTTATGTTATCTGTGTGTATTCGCTTCCTGCTTGGTTGCCCTCCTTTAAGAAGACATTTCTGTCAAAACTAGTGTGGATGTCGAGAATATTCGAACCATTGTTAATAATTGCAATATCTCGAGTTGGTGGTTG | |||||||||
gi|198094322|gb|FL821888.1|FL821888 CCGG18105.g1 CCGG Panicum virgatum late flowering buds + seed development (H) Panicum virgat TAGCCAAGGATGACTTGCTTA EST sequence (targeted fragment marked with yellow): GCCAACAGCCTCTGAAGGCTGTTGTGACCTCCTCAGAGCATGACTAGAGGGGTTACCGGACAGCCGAATGCTAGGAACTGGCGACAACCAGCAGATGCTGCTGGGTGTTACCAGCTCCGGGTCAGGGATTGTCCCTCCCATCGTTTGGCTGTCGGTAGGCAATTCATTCTTGGCTGAAGGCATTGTGGTTATTTCCGCTTATCGCCTAATTCTCCTAGATATTCTATTTCTGGGATCTTGTGATGAGTGGAACACCCGTGCCCCCAAAAATGCTGGTAGTACTAGCTTCCAGCATCAAAGTCGTTTTGCGCGAGCAGGTTTCAGTGTTGTTTTTCTGAATAAAGCTTGAAACTTCAGATTAGGTACTGGAAGTGGAGTATATTTCTGAGTCTGATTGTGTGTCAAGACTTGGCTTTTGTTAGTGATGAATTGTGGTGTGCTTGAAGCTTGTGTGGACATGGTTTGTAATATGTGGTGTGTTGAAAGCTTGAACTCGGTAATGTAATGATGTATTTGACTACTG | |||||||||
gi|197974851|gb|FL717205.1|FL717205 CCGB3732.g1 CCGB Panicum virgatum apex + stem (L) Panicum virgatum cDNA clone CCGB3732 3', m TAGCCAAGGATGACTTGCTTA EST sequence (targeted fragment marked with yellow): GCTGGCTGTCTGTAGGCAAATCATTTTTGGCTGTTTTGCAATGGGGTGCGATCCTCCTCATCACCTAGCTACCTACCCATGTCCCTGAAACTCATACGGTGCTGGGTTTCAGGGGTCCTGTGATGCTGGAGCACCCCCATATGCCTGTAACATAGTGTACCCAAAAGCACTGCTGCTTGGTACTGCTTGTTGATAGCAGTGTCTCAGTACGGAATTTTGTGGTGTCAGGTCGATCAGTGTTTGAATAATTGAGGTGTCAGACTTCACAGTTGCTCCAGTTTTTGGAGGTGTGTCTGGGTCTGTTTGAAGCTTTGAGGTTTGAAACTTTGTGCTCGGTGAAGATACTGTGCTAATATGTAAGTCTGGGACCTACGTTCTGTT | |||||||||
gi|198002768|gb|FL747483.1|FL747483 CCGC2611.g1 CCGC Panicum virgatum early floral buds + reproductive tissue (H) Panicum virgat TAGCCAAGGATGACTTGCTTA EST sequence (targeted fragment marked with yellow): GCAGGAGCTCGGCAAGAGCAACAACGGCAGCAACCCGCGCTGCCACTCCCGGAGCAGCGTCTCCAGCCTGTCCGGCTCCGAGGTGTCGAGCATCTACGACCACCACGACGACCACGCGAGCCGCCACCAGTACGGCGGCATGGAGCCGCACCTTCGGGCGCCTTCCTTCTTCACCCCGCTGCCGGCCATCATGGACGGTGACCACGGCGGGGCTGCCACCATCCCCTCCTTCAAGTGGGCTGCCAGCGACGGCTGCTGCGAGCTCCTCAAGGCGTGAACCGAGGAGGAGGGGATGGCTACTCAGACGGCCGGCCTTCGCCCCGTTGGCTGGCTGTCTGTTTGTAGGCAAATCATTCTTGGCTGTTCTGCAATGGGTTTTGAACCTCCTCATCACCTAGCTACCTACCCATGTCCCTGAAACTCGTACAGTGCTGGGTTTCAGGGGTCCTGTGATGCTGGAGCTCCCCCATATGCCTGTAACATAGTGTACCCAAAAGCGCTGCTGCTTGGTACTGCTTGTTGATAGCAGTGTCTCAGTACGTAATTCTGTGATGTCAGGTCGATCAGTGTCTGAATAATTGAGGTGTCGGACTTCACAGTTGCTCCAGTTCTCGGATTGGAGGTGTGTCTGGGTCTGTTTGAAGCTTTGAGGTCTGAAACTTTGTGCTCGGTGAAGATACTGTGCTTAATGTGTAAGTTTGGGACCCGTTCTGCTATCATGTCGGTTGTTGC | |||||||||