miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse




mature miRNA: TAGTCAAGGATGACTTGCCTA
species: Panicum virgatum
database: miRNEST
The numbers on the right side of the alignments show a score calculated for them.
When calculating the score, a mismatch is given a score of 1, bulge: 2, and wobble: 0.5.

Predicted miRNA targets
gi|197980948|gb|FL727055.1|FL727055 CCGB885.b1 CCGB Panicum virgatum apex + stem (L) Panicum virgatum cDNA clone CCGB885 5', mRN

TAGTCAAGGATGACTTGCCTA
| |||||||||| |||||||
ACCAGTTCCTACAGAACGGAA

EST sequence (targeted fragment marked with yellow):
CAAAATTATTGGTTTCAGATGGATTAGATAGCTGCCTAGATGCTGGCTCTGAGGTAACAACTATATGGCAGTTATTGAGCAACACTTACGAGGTGAGACACAGGTCATCAGTAAGGCAAGACATCCTTGACCAGCTGCTTGACAGCATTTCAACGTCTAAGAAGGACAAAGTTATCAGGGCATCAGTCTGTGTACTACTGCTCATGATATCTGAAGATAGAAATATGATGAGAGGCATCAAGAGAAAGGACTTCCATTTATCCAATTTAGCCACCGCATTGAAGAGAGATGTGCATGAAGCAGCCATTCTGATATACTTGTTGGACCCTACACCTTTAGAGATCAAAAACTTGGATTTGCTGCCCTCGCTTCTGCATATTGCCTGTAACTCAGACACCAAAAAATGGCCCGCAATTCTTCCACTTACACCGACGTCAGCATCGATATCTCTGATTGAGATCCTAGTGACGGCATTTGACTATATAACAAACAATGTCCACTTGGCTTCCCTCAGCTCTCCTCCTATTCTGTCTAAGCTTGTTGATGTTGCGAAGAACAACAACTTGGAAGAAGGTGTCGCCCTGGCAGCTATTATTATCAGATGTGGGAGTCTCAATGGAAACTGCAAGAAGTTCTTATCACAGGCTACTCCAGTGGACCCATTCCTTCACCTTCTCAGACAAAAAGAGCACCGTGCCAAGTGTGCTGCACTTGAATACTTCCACGAGATTCTTCAGATTCCCCGGTCGTCAGCAAACTCTCTGCTCCAAGAAATACGGCGGCAGGAGGCATTGCAATTATGCACACATTGATGGG



gi|198302597|gb|FL971818.1|FL971818 CCHY10786.g1 CCHY Panicum virgatum callus (N) Panicum virgatum cDNA clone CCHY10786 3', mRNA

TAGTCAAGGATGACTTGCCTA
||.||||||||| ||||||
TTCGGTTCCTACTTAACGGAC

EST sequence (targeted fragment marked with yellow):
ATTAGCAGAGAACGAGCCGTATATGTGAATCCGAAACAATATCATGGTATACTTCGCAGAAGACAGTTCCGTGCTAAGTTAGAGGTTCAGAACAAGCTAGTCAAAGCACGAAAGCCTTACCTTCATGAGTCTCGGCATCTTCATGCAATGAAGAGGGCAAGAGGTTCGGGTGGACGATTCCTCAATACTAAACAGCTCCAGCAGCAGCCTCGCAATGCCTCCACCAGGTCCACCACAAATGGCACAGCAAGCTCCTCAGGTTCAACTCATCTACGGCTTGGTGGAGGCACAACTAGAGATCAAACTTTTTTTGGCACCCAAAGCAATGCCCTCACAAGACAATAGCAAGAAGGCTGTTTCTTCAGCTCCTGGCTTCACCGTGACTCCAATGTTGCACAGAGATGACACCTTCTTCCAGCACCCAAGCCATCATCTCAGCTTCTCTGGCCATTTTGGGCAGGCAAGCGCGCAAGCCGGCATGCATAATGGGACTCAGCAAAGGGTTCCAGTTATGAGATGACAGTTGGCGAACCTTAGCTGGTGATCCAGGATTCTAGGGGTCCTCTCCTCGTCCGGTGTGGTCTCGGCCTCTCAGGCAATTCATCCTTGGCTTAGTCTCTGGTGGGTTAGAAGCTACCAAATGTATGACACCGTGTTGTGGTTTGCAGAGCCCATAAATAAGGGCACTACAGGAGAGATGCTAATACAAGGCATTTT



gi|198229745|gb|FL946594.1|FL946594 CCGP14643.g1 CCGP Panicum virgatum root (L) Panicum virgatum cDNA clone CCGP14643 3', mRNA s

TAGTCAAGGATGACTTGCCTA
.||.||||.|||| |||||||
GTCGGTTCTTACTAAACGGAT

EST sequence (targeted fragment marked with yellow):
TCTTCACGAGTCTCGCCACCTCCACGCAATGCGCCGGGCAAGAGGCTCCGGCGGGCGCTTCCTCAACACGAAGAAAGAAGGGGGCTCGAGTGCGAACGGCGCCAGCAAGACGGTGTCAGCGGCGCCGGCTGCGCGCCTCGCCACGTCTCCCAGCACCGAGCCTCGACGGGTGCCGGGGCTCGGCAAGGGCAGTGACGGCAGCAACCCGCGCTGCCAGTCCCGGAGCAGCGTCTCCAGCCTGTCCGGCTCCGAGGTGTCGAGCATCTACGACGACCATGCGAGCCGCCACCAGTACGGCGGCATGGAGCCGCACCTCCGGGCGCCGTCCTTCTTCACCCCGCTGCCGGCCATCATGGACGGCGACCACGGCGGGGCTGCCGCCATCCCCTCCTTCAAGTGGGCAGCCAGCGACGGCTGCTGCGAGCTCCTCAAGGCGTGAACCGAGGAGGGGATGACTACTCAGACGGCCGGCCTTCTCCCCGTTGGCTGGCTGTCTGTAGGCAAATCATTCTTGGCTGTTCTGCAATGGGGTGCGATCCTCCTCATCACCTAGCTACCTAACCATGTCCCTGAAACTCATACGGTGCTGGGTTTCAGGGGTCCTGTGATGCTGGAGCACCCCCATATGCCTGTAACATAGTGTACCCAAAAGCACTGCTGCTTGGTACTGCTTGTTGATAGCAGTGTCTCAGTACGGAATTCTGTGATGTCAGGTCGATCAGTGTCTGAATAATTGAGGTGTCAGACTTGCAC



gi|198004185|gb|FL749316.1|FL749316 CCGC3606.g1 CCGC Panicum virgatum early floral buds + reproductive tissue (H) Panicum virgat

TAGTCAAGGATGACTTGCCTA
.||.||||.|||| |||||||
GTCGGTTCTTACTAAACGGAT

EST sequence (targeted fragment marked with yellow):
CGGCGCCATCAGCGCGCTCGCACGTCTCCTAGCACCGAGCATCCACGGGTGCCGGAGCTCGGCAAGGGCAACAACGGCAGCAACCCGCGCTGCCACTCCCGGAGCAGCGTCTCCAGCCTGTCCGGCTCCGAGGTGTCGAGCATCTACGACCACCACGACGACCACGCGAGCCGCCACCAGTACGGCGGCATGGAGCCGCACCTCCGGGCGCCTTCCTTCTTCACCCCGCTGCCGGCCATCATGGACGGTGACCACGGCGGGGCTGCCACCATCCCCTCCTTCAAGTGGGCTGCCAGCGACGGCTGCTGCGAGCTCCTCAAGGCGTGAACCGAGGAGGAGGGGATGGCTACTCAGACGGCCGGCCTTCGCCCCGTTGGCTGGCTGTCTGTCTGTAGGCAAATCATTCTTGGCTGTTCTGCAATGGGTTTTGAACCTCCTCATCACCTAGCTACCTACCCATGTCCCTGAAACTCGTACAGTGCTGGGTTTCAGGGGTCCTGTGATGCTGGAGCTCCCCCATAGTGTACCCAAAAGCGCTGCTGCTTGGTACTGCTTGTTGATAGCAGTGTCTCAGTACGTAATTCTGTGATGTCAGGTCGATCAGTGTCTGAATAATTGAGGTGTCGGACTTCACAGTTGCTCCAGTTCTCGGATTGGAGGTGTGTCTGGGTCTGTTTGAAGCTTTGAGGTCTGAAACTTTGTGCTCGGTGAAGATACTGTGCTTAATGTGTAAGTTTGGGACCCGTTC



gi|198094322|gb|FL821888.1|FL821888 CCGG18105.g1 CCGG Panicum virgatum late flowering buds + seed development (H) Panicum virgat

TAGTCAAGGATGACTTGCCTA
.||.||||.|||| |||||||
GTCGGTTCTTACTTAACGGAT

EST sequence (targeted fragment marked with yellow):
GCCAACAGCCTCTGAAGGCTGTTGTGACCTCCTCAGAGCATGACTAGAGGGGTTACCGGACAGCCGAATGCTAGGAACTGGCGACAACCAGCAGATGCTGCTGGGTGTTACCAGCTCCGGGTCAGGGATTGTCCCTCCCATCGTTTGGCTGTCGGTAGGCAATTCATTCTTGGCTGAAGGCATTGTGGTTATTTCCGCTTATCGCCTAATTCTCCTAGATATTCTATTTCTGGGATCTTGTGATGAGTGGAACACCCGTGCCCCCAAAAATGCTGGTAGTACTAGCTTCCAGCATCAAAGTCGTTTTGCGCGAGCAGGTTTCAGTGTTGTTTTTCTGAATAAAGCTTGAAACTTCAGATTAGGTACTGGAAGTGGAGTATATTTCTGAGTCTGATTGTGTGTCAAGACTTGGCTTTTGTTAGTGATGAATTGTGGTGTGCTTGAAGCTTGTGTGGACATGGTTTGTAATATGTGGTGTGTTGAAAGCTTGAACTCGGTAATGTAATGATGTATTTGACTACTG



gi|198123003|gb|FL848744.1|FL848744 CCGH26720.g1 CCGH Panicum virgatum late flowering buds + seed development (L) Panicum virgat

TAGTCAAGGATGACTTGCCTA
.||.||||.|||| |||||||
GTCGGTTCTTACTAAACGGAT

EST sequence (targeted fragment marked with yellow):
TCGACGGGTGCCGGGGCTCGGCAAGGGCAGTGACGGCAGCAACCACGCTGCCAGTCCCGGAGCAGCGTCTCCAGCCTGTCCGGCTCCGAGGTGTCGAGCATCTACGACGACCATGCGAGCCGCCACCAGTATGGCGGCATGGAGCCGCACCTCCGGGCGCCGTCCTTATTCACCCCGCTGCCGGCCATCATGGACGGCGACCACGGCGGGGCTGCCGCCATCCCCTCCTTCAAGTGGGCAGCCAGCGACGGCTGTTGCGAGCTCCTCAAGGCGTGAACCGAGGAGGGGATGACTACTCAGACGGCCGGCCTTCTCCCCGTTGGCTGGCTGTCTGTAGGCAAATCATTCTTGGCTGTTCTGCAATGGGGTGCGGTCCTCCTCATCACCTAGCTACCTACCCATGTCCCTGAAACTCATACGGTGCTGGGTTTCAGGGGTCCTGTGAC



gi|304453281|gb|HO252109.1|HO252109 CCTW667.g1 CCTW Panicum virgatum Carthage normalized leaf Panicum virgatum cDNA clone CCTW66

TAGTCAAGGATGACTTGCCTA
||.||||||||| ||||||
TTCGGTTCCTACTTAACGGAC

EST sequence (targeted fragment marked with yellow):
CAGAAGGCTGTTTCTTCAGCTCCTGGCTTCACCGTGACTCCAATGTTGCACAGAGATGACGCCTTCTTCCAGCACCCAAGCCATCATCTCAGCTTCTCTGGCCATTTTGGGCAGGCAAGCGCGCAAGCCGGCATGCATAATGGGACTCAGCAAAGGGTTCCAGTTATGAGATGACAGTTGGCGAACCTTAGCTGGTGATCCAGGATTCTAGGGGTCCTCTCCTCGTCCGGTGTGGTCTCGGCCTCTCAGGCAATTCATCCTTGGCTTAGTCTCTGGTGTGTTAGAAGCTACCAAATGTATGACACCGTGTTGTGGTTTGCAGAGCCCATAAATAAGGGCTTGATGGTGAACACTGCTATTGTTACATCGGTGTGTACGTGTTAGAATAAACTCACACGCTTTATATGGTGATAGTTGTACGTTATGCTACACAGGTTTCAGTTTGCCCTTGTTTCTGTTAAAACAGTCTGACGTAGTATTATTGGTACAGATTATGTCTTCAAGACCTGTCTAGCTGCTTGTCAGAAGAGCTGTTTATAAGACTACTCCCAATGCTTTTTGATGTAGTCTTATATTTAGGAGTTGCATGGACTTGGAGCACAATGCACTGGGAGTAGCCGAATAAGAATCTCAACATCTCAATGTAACCTGTTACTTAGAAGTGATCCTCATTGTAACCTGG



gi|197974850|gb|FL717204.1|FL717204 CCGB3732.b1 CCGB Panicum virgatum apex + stem (L) Panicum virgatum cDNA clone CCGB3732 5', m

TAGTCAAGGATGACTTGCCTA
.||.||||.|||| |||||||
GTCGGTTCTTACTAAACGGAT

EST sequence (targeted fragment marked with yellow):
GCTGGCTGTCTGTAGGCAAATCATTCTTGGCTGTTCTGCAATGGGGTGCGATCCTCCTCATCACCTAGCTACCTACCCATGTCCCTGAAACTCATACGGTGCTGGGTTTCAGGGGTCCTGTGATGCTGGAGCACCCCCATATGCCTGTAACATAGTGTACCCAAAAGCACTGCTGCTTGGTACTGCTTGTTGATAGCAGTGTCTCAGTACGGAATTCTGTGGTGTCAGGTCGATCAGTGTCTGAATAATTGAGGTGTCAGACTTCACAGTTGCTCCAGTTCTTGGAGGTGTGTCTGGGTCTGTTTGAAGCTTTGAGGTCTGAAACTTTGTGCTCGGTGAAGATACTGTGCTAATATGTAAGTCTGGGACCTACGTTCTGTTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACC



gi|304497397|gb|HO294816.1|HO294816 CFCA2465.g1 CFCA Panicum virgatum Sunburst normalized leaf Panicum virgatum cDNA clone CFCA2

TAGTCAAGGATGACTTGCCTA
|| ||||||||| |.||||.|
ATAAGTTCCTACGGGACGGGT

EST sequence (targeted fragment marked with yellow):
TCTCCAGGCAGACTCAAACTGTTGGCAAGCCAAAAGAACCTATCCTAATACGATCGAAAGAAGAGGTTTCCCTGACCTTGAACTGAGGCTTATGAACTCCTTCTCCAAGGCGTCTACCCTGTCTGATCATGTGACTATCCATCTTTCATCCAAGCAACCCGCCGTGTTGGAGTACAAGGTGTTGGAGTACAAGATCCTAGGGATGGGATATATCAGCTATTACATGATGCCAGGGATCTCAAAGGAAGATGAGGCGCAGAAGATGCAGAGGATGGCAATTGAAGATTAGATGCAGAATGAGGGAGATGAGATGCAGAACTGATGACTAAAAGTAAGATACACGTACCATCAATTGAAAATTCTTCGTCTTGCATATGAGTGCCGCAAGGCAATTCCCATGGGAAGCAAATGTGGAAGTAAGTGCATGCATGTTATATATCAACGTGCAACTCTATTTTAGTTACTTATCAAAATAAAAAAAATGCTTGCTAGATATCGTACTACATTATTATGTGTATAATAAAAAGACTTACAACATGAAGTTTGTTTGTTTTTATAGCTCATACTGTTCGTCAGCCACTCCGACCTCCACCACCACAGTGGGCAGGGCATCCTTGAATAAATTAAAAGGCTCTTTCCATGGACAACGAAGATGATGAAAAATAAGCATGTGGTGGTTAATTAACC



gi|198002768|gb|FL747483.1|FL747483 CCGC2611.g1 CCGC Panicum virgatum early floral buds + reproductive tissue (H) Panicum virgat

TAGTCAAGGATGACTTGCCTA
.||.||||.|||| |||||||
GTCGGTTCTTACTAAACGGAT

EST sequence (targeted fragment marked with yellow):
GCAGGAGCTCGGCAAGAGCAACAACGGCAGCAACCCGCGCTGCCACTCCCGGAGCAGCGTCTCCAGCCTGTCCGGCTCCGAGGTGTCGAGCATCTACGACCACCACGACGACCACGCGAGCCGCCACCAGTACGGCGGCATGGAGCCGCACCTTCGGGCGCCTTCCTTCTTCACCCCGCTGCCGGCCATCATGGACGGTGACCACGGCGGGGCTGCCACCATCCCCTCCTTCAAGTGGGCTGCCAGCGACGGCTGCTGCGAGCTCCTCAAGGCGTGAACCGAGGAGGAGGGGATGGCTACTCAGACGGCCGGCCTTCGCCCCGTTGGCTGGCTGTCTGTTTGTAGGCAAATCATTCTTGGCTGTTCTGCAATGGGTTTTGAACCTCCTCATCACCTAGCTACCTACCCATGTCCCTGAAACTCGTACAGTGCTGGGTTTCAGGGGTCCTGTGATGCTGGAGCTCCCCCATATGCCTGTAACATAGTGTACCCAAAAGCGCTGCTGCTTGGTACTGCTTGTTGATAGCAGTGTCTCAGTACGTAATTCTGTGATGTCAGGTCGATCAGTGTCTGAATAATTGAGGTGTCGGACTTCACAGTTGCTCCAGTTCTCGGATTGGAGGTGTGTCTGGGTCTGTTTGAAGCTTTGAGGTCTGAAACTTTGTGCTCGGTGAAGATACTGTGCTTAATGTGTAAGTTTGGGACCCGTTCTGCTATCATGTCGGTTGTTGC



gi|304509232|gb|HO307942.1|HO307942 CFCB5736.b1 CFCB Panicum virgatum WS4U normalized leaf Panicum virgatum cDNA clone CFCB5736

TAGTCAAGGATGACTTGCCTA
.||||||.|||| ||||| .|
GTCAGTTTCTACCGAACGAGT

EST sequence (targeted fragment marked with yellow):
CCAGCCAAGATTCCGGAGCATGTGGGAGAGATACTGCCGTGCAGTTTCTGCAATTGTTTATGTTGTTGACGCAGCAGATAGAGAAAACATGGCCATTGCAAAAGGTGAGCTCCATGACCTCCTGAGCAAGCCATCTTTGACTGGAATCCCATTACTAGTCATTGGCAATAAAATTGACAAGCCTGAAGCTTTCCCTAAGCAAAGCTTCGCAGAAGTCATGGGCCTAAAGACAATCACTGACCGAGAAGTGGCATGCTTCATGATATCGTGCAAGAACTCGACCAACATTGATTCTGTCATCGACTGGCTGGTGAAGCACTCGGAAAAGAAGAATTGATCTAAATCTGTAACTCTTGAAGCGTGCTCCAGTTTCTCCCTTTTTGCATGTCGCGTAGCATTGGGGCTGTAAATTATGCAAGAGGTATTAATTAGGGATGCTGTGTTCATAATTTTGTTAACCTGGTTTGGCAATATGTTGGTAGGCCGCGTCTGGTATTGTGCACGCGCGTGCTCTGTTACAACTTACAGGAGGCTGTTCTCTGTGTTCCATACTTGCTTGGTCAATTTGAGCTGTGTGATTTGTTTC



gi|198104856|gb|FL832432.1|FL832432 CCGH17345.b1 CCGH Panicum virgatum late flowering buds + seed development (L) Panicum virgat

TAGTCAAGGATGACTTGCCTA
|.|||||||||||.|.||.|
CTTAGTTCCTACTGGATGGGT

EST sequence (targeted fragment marked with yellow):
GCACCATCTGAGGCTGATGGAGCAGAGGCTGAGGCCCCAGAGGAAGAAACAACAGAGAATGTGGGTGAAGCAACCTTTAGCTATGACCGCTTGATATCCAAATCCACCGATCCTGTTCGTGGGATAGATTACAAACGCAGAGAGGCATACTTATCAGATAGTGAGTTTCAAACTGTTTTTGGCATGACTAAGGATGCATTCTACCAACAGCCAAATTGGAAGCAAGAACTACAGAAGCGAAAAGCTGATCTCTTCTGAAGAGAACAAGCTTCGGATCTAGTGTCTGCTATAAAATTTGATCCTCTTATCGTGAATGGGAGTAAATCTATCATATATTATCAGTTATGCTGCTTTCTGAGGACAGGCTACTGGTGGCTTTGCTCAATTGGTTTTTTTGCGACCAATTTTATAGGTCAATTCTTTTATTTGTACATGGCCTGAGTTGTGCTGCTTGCGAGGTCCTTTATATACTCTAGCTTGCTTTTGTGACTGTCCATATGTGTGTATAATTTTTTTTTTTCATTGGTTTTGTTACGTATGTGGCATTTTCCTGGGTAGGTCATCCTTGATTCATTGTATTGTTTACTCAGGTGCATTTGCTCACGAAATTATTTTGTGCTGTCTTGTTTTGCTGTTGATGGGTTGAC



gi|198082948|gb|FL811737.1|FL811737 CCGG12511.g1 CCGG Panicum virgatum late flowering buds + seed development (H) Panicum virgat

TAGTCAAGGATGACTTGCCTA
.||.||||.|||| |||||||
GTCGGTTCTTACTTAACGGAT

EST sequence (targeted fragment marked with yellow):
ACGAAGATGCTGGTGGAGACGGCAAGGCAATGTTCAGCAACCCGCTTATGCGCCAGGTGGCATCTCCAAGTTCAGAGATCCAGCAGTCAGACCTGGGCAACCCGAGCAGCGTCTCCAGTCTGTCGGGATCAGAGGTGTCAAGCATATATGATCATGAAGATGTGGATCACTTCCACAGCTTTGATCACATCCGCACTCCTTTTTTCACCCCGCTCCCGAGCATCATGGGCAGTGAGCATGGGGTCGGTAACCCCTTCAAGTGGCCAATAGCCTCTGAAGGCTGTTGTGACCTCCTCAGAGCATGACTAGAGGGGTTACCGGACAGCCGAATGCTAGGAACTGGCGACAACCAGCAGATGCTGCTGGATGTTACCAGCTCCGGGCCAGGGATTGTCCCTCCCATCGTTTGGCTGTCGGTAGGCAATTCATTCTTGGCTGAAGGCATTGTGGTTGTCTCTGCTCATCGCCTAATTCTCCTAGAATTTCTATTTCTGGGATCTTGTGATGAGTGGAACACCCGTGCCCCCAAAAATGCTGGTAGTACTAAGCTTCCAGCATCAAACTCGTTCTGCACTAGCAGGTTTCAGTGTTGTTTTCTGAATAAAGCCTGAAACTTTGGACTCGTCTGAAGTTTCAGAGGTACTGGAAGTGGATTATGTTTGGAATCTGATTGTGTGTCAAGACTTGGCTTTGTTAGTGATGAATTGTGATGTGCTTGAAGCTTGTGTGGACATGGTTTGTAATATGTGGTTTGTTGAAAGTTTGAACTCGGT



gi|304509233|gb|HO307943.1|HO307943 CFCB5736.g1 CFCB Panicum virgatum WS4U normalized leaf Panicum virgatum cDNA clone CFCB5736

TAGTCAAGGATGACTTGCCTA
.||||||.|||| ||||| .|
GTCAGTTTCTACCGAACGAGT

EST sequence (targeted fragment marked with yellow):
CCAGCCAAGATTCCCGGAGCATGTGGAGAGATACTGCCGTGCAGTTTCTGCAATTGTTTATGTTGTTGACGCAGCAGATAGAGAAAACATGGCCCATTGCAAAAGGTGAGCTCCATGACCCTCCTGAGCAAGCCATCTTTGACTGGAATCCCATTACTAGTCATTGGCAATAAAATTGACAAGCCTGAAGCTTTCCCTAAGCAAAGCTTCGCAGAAGTCATGGGCCTAAAGACAATCACTGACCGAGAAGTGGCATGCTTCATGATATCGTGCAAGAACTCGACCAACATTGATTCTGTCATCGACTGGCTGGTGAAGCACTCGGAAAAGAAGAATTGATCTAAATCTGTAACTCTTGAAGCGTGCTCCAGTTTCTCCCTTTTTGCATGTCGCGTAGCATTGGGGCTGTAAATTATGCAAGAGGTATTAATTAGGGATGCTGTGTTCATAATTTTGTTAACCTGGTTTGGCAATATGTTGGTAGGCCGCGTCTGGTATTGTGCACGCGCGTGCTCTGTTACAACTTACAGGAGGCTGTTCTCTGTGTTCCATACTTGCTTGGTCAATTTGAGCTGTGTGATTTGTTTC



gi|198161787|gb|FL876041.1|FL876041 CCGI9664.g1 CCGI Panicum virgatum etiolated seedlings (H) Panicum virgatum cDNA clone CCGI96

TAGTCAAGGATGACTTGCCTA
.||.||||.|||| |||||||
GTCGGTTCTTACTTAACGGAT

EST sequence (targeted fragment marked with yellow):
TCTCCAGTCTGTCAGGCTCAGAGGTGTCAAGCATATATGATCATGAAGATGTGGATCACTACCACCAGCTTTGATCACCTCCCGCACTCCCGTTTTCACCCCCGCTCCCGAGCATCATGGACAGTGAACATGGGGTCGGTATCCCCTTCAAGTGGCCAAACAGCCTCTGAAGGGCTGTTGTGACCTCCTCAGAGCATGACTAGAGGGGTTACTGGACAGCCGAATGCTAGGAACTGGCGACAACCAGCAGATGCTGCTGGGTGTTACCAGCTCCGGGTCAGGGATTGTCCCTCCCATCGTTTGGCTGTCGGTAGGCAATTCATTCTTGGCTGAAGGCATTGTGGTTATTTCCTCTTATCGCCTAATTCTCCTAGATATTCTATTTCTGGGATCTTGTGATGAGTGGAACACCCGTGCCCCCAAAAATGCTGGTAGTACTAGCTTCCAGCATCAAACTCGTTTTGCGCGAGCAGGTTTCAGTGTTGTTTTTCTGAATAAAGCTTGAAACTTCAGACTAGGTACTGGAAGTGGAGTATATTTCTGAGTCTGATTGTGTGTCAAGACTTGGCTTTTGTTAGTGATGAATTGTGGTGTGCTTGAAGCTTGTGTGGACATGGTTTGTAATATGTGGTGTGTTGAAAGCTTGAACTCAGTAATGTAATGATGTATTTGACTACTGAGACTTTGGGCTTGGTTTGT