| mature miRNA: TGAAGCTGCCAGCATGATCTG species: Panicum virgatum database: miRNEST The numbers on the right side of the alignments show a score calculated for them. When calculating the score, a mismatch is given a score of 1, bulge: 2, and wobble: 0.5. |
| Predicted miRNA targets | |||||||||
gi|198017445|gb|FL756323.1|FL756323 CCGC7151.g1 CCGC Panicum virgatum early floral buds + reproductive tissue (H) Panicum virgat TGAAGCTGCCAGCATGATCTG EST sequence (targeted fragment marked with yellow): TCGGTGGGGGAGGTCATTGGACATCACCCGGTTCTCTAACTATGCTGAACTTCGAGAGGACTAGGTCAGATGTTCGGCATAAAGGGTCAGTTGGACGACCTGATAGATCAGGCTGGCAGCTTGTATTTGTCGACAGGGAGAATGATGTGCTTCTCCTTGGAGACGACCCGTGGGAGTCATTTGTGAATAGTGTATGGTACATCAAGATACTTTCACCTGAGGATGTGCATAAGATGGGAAAGCAAGGAAACGATCCACGCTACCTATCTTAAATGGATACACGGAGCCTTTTCTGCATACAATATGTTCGGAGTGGAAGTATAGATGCAACAGTTTCCCATCACTAAAGGATGAGTGTTTCTGGCAGATTAATAATGCTACTGAAAGCGCCCTTAGGCTCCCATGACGATTCTGCGGTACATGGTAGCATTCCTGCTCGTGACAGTCTGCTCCGATGTGCTTGCATGTTCGCCCGTGTCATCTCTTGCATGTCCACCATGCACGTCTTCGGAACTCCCCGTTTATCTGTATCTGGTGCAGGCCACCGATACTCTGGACTGATATCTTGTAAGTTCCACTTAGGAATCAGTATCAGTATTCAGTAACTCTATCCTAGTTGGTTTGTACTTTGTAGCTCGCACGGCGCTCGTGTCGCGTCAAATCTTCGGACTAAATCTTTAGTTGAAACTGTATCGTGATTCGTAAGTTATGTATTTGAGGATTCCTCAGCACGCGTTGGACGATGAACTGCAATAATTTGAATGCACGAGGATTGTTTT | |||||||||
gi|198322653|gb|FL989867.1|FL989867 CCHY20449.b1 CCHY Panicum virgatum callus (N) Panicum virgatum cDNA clone CCHY20449 5', mRNA TGAAGCTGCCAGCAT-GATCTG EST sequence (targeted fragment marked with yellow): GGATAGGCAGACTGCCAACCACAATAGTAATGACTTGCTAGGTTCTTCTGGAATACAGTATGGCCTACATCGTGGACCTGGAGCTATGGGAGGCCTGCACTCTAGTAATAATTCACGAGGCTTGAATGAAATTCAGAACAATGATTTATCATCAAATACATATGCTTCTATTTTAGGGTCACCTCTTTCTCGAAGTGCATCTCCAGATCCTGAGCTTGTGAGGAGGGCCCCTAGTCCATCTCTACTTCCAATTGGTGTGAAAGTTAGTGCTAATGACAAGAAGATTAATGGTGGTTCATCTTCTTTCCGTCGTAGTTCATCTGCTATAGGTGAACCTGATGATCTTATGGCAGCTCTATCTGGGATGAGCTTATCGTCTAGGACAATGAGTGGGCAAACTATGGACCAGTCTCAGCTCTATCAGGACGTTGATAATGTCCAGAAGTTTCTGTTCGATCGACAGGGTGACCAAGCAAATGGCAATCAGCAGCACTCCTACATGAGACGTCCTGAGCATGGACAGTCTAAAGTACCTGATGGCTATTCGGCAAATTTGGCCAATTCATCTACGATGAGAAACCAGATTAATGCTGGCAGTTTCACATCATTTGACAATTTGTCACTTGGATCTGGCTTTGCTTCCCCTAGGATTGGTTCTAGTTCCCCTGGAGGGACTGTATCTTCTCGACAGATTTAGCTGGTATGTCTAACATGCTAAACTACAGTGGAATTGGAAGTCCGACTGCATCACCTTCTTCTTCAGAC | |||||||||
gi|198074663|gb|FL802009.1|FL802009 CCGG3902.g1 CCGG Panicum virgatum late flowering buds + seed development (H) Panicum virgatu TGAAGCTGCCAGCATGATCTG EST sequence (targeted fragment marked with yellow): GAGAGCTGGATCCCAGGGTACCGCAAAGAAGAAATAGGAAATTGCATTAAAAGCACATCCAAGTTTATTGTGAAGCAACAAGGAAAAGATGGCTCCTGGTTTGGCAGTTGGGGTGTATGTTTCACTTACGGATCATTCTTTGCTGTAAAAGGATTAGCTGCTGCTGGAAGAACTTATGAAAATAGTTCCTCCATCAGGAAAGCATGCAGCTTTCTGTTGTCAAAGCAGCTATGCACAGGTGGATGGGGTGAAACTTATCTTTCTAGTGAGACAGAGTCATACGTGGGGACCAGAGGTCCTCATGCAGTAAACACTGCTTGGGCAATGTTAGCTTTAATTTACGGTGGTCAGGTGGAACGAGATCCAACACCTCTATATCAAGCTGCAAAAGAATTGATCAACATGCAACTAGAGTCAGGCGACTTTCCCCAACAAGAACATGTTGGGAGCTTCAACAGCTCCCTATACTTCAATTACGGCAACTACCGCCACTCGTTCCCGATCTGGGCTCTTGG | |||||||||
gi|304462011|gb|HO259350.1|HO259350 CCTX4667.b1 CCTW Panicum virgatum Cave-in-Rock normalized leaf Panicum virgatum cDNA clone C TGAAGCTGCCAGCATGATCTG EST sequence (targeted fragment marked with yellow): AGTCATGCATCCTACTGTTGAAGAAAAACAGTTGGGTAGAAGTATTTGGATATTATGACCTTGTCGGGGAAAATAACTATAGCAGCCTCCTTTTTTGGAGTTGTTCAGTTAGGACTTTCAGTTCATTCTGGCACCTTCAATACTCCTGTTCTCCTAGCAACCATTTGGTGCTGCTAGCTGAACATCGTTTAATACTTGATTGCACTACAGTTGTGTCTGCATATTTTTTTCTACTAAAAGTTTGATTGAACTTATCTGGGTGAGGCTGATTTCTACTTCTTTTGTGCAGCAGGCATATTCTCCTGAGGAATGGGAACTGGCTACATTGGTGCTTACACGACCTAGCTATCAGATTAAGTTCAAACATACTGGTGAAGTTATATTTGATGAGAAGTACTCACCAAATCTACAGACAAAAATTCCGAATGGGCGCACTACTCAATTTGTATTAGTAAGTTCTACGGGCGCAAACCTACCGTTTAATACACAGGGACTATCAGAGCCAAACAATGAGGACCACGATGTTAGGTTACGTGACCTAATTGTATTAGTCATGAGAACCTTCCAGAAAAAGGCTCTAGATGCTAAAAGGAAAGGCAAGGCTTAGAATCCGTGTAGATGTGTTACGAAAGATTCTACGTAGAAGATTTTCCCTTTTCCGATTGTTTTGTGCAGTATTCAATATTTTTTTGTTCTCGAGGTGAAATGAGCTGTCGATTGTAGCAGACATTTCGAGAG | |||||||||
gi|198004363|gb|FL745242.1|FL745242 CCGC1370.g1 CCGC Panicum virgatum early floral buds + reproductive tissue (H) Panicum virgat TGAAGCTGCCAGCATGATCTG EST sequence (targeted fragment marked with yellow): ACGACCCTGATAGATCAGGCTGGCAGCTTGTATTTGTCGACAGGGAGAATGATGTGCTTCTCCCTTGGAGACGACCCGTGGGAGTCATTTGTGAATAGTGTATGGTACATCAAGATACTTTCACCTGAGGATGTGCATAAGATGGGAAAGCAAGGAAATGATCCACGCTACCTATCTTAAATGGATACATGTAGCCTTTTCTGGCTCCCATGACGATTCTGCGGCACAAGGTAGCACTCCTGCTCGTGACAGTCTGCTCCGCCGTGCTCGCTTGTTCGCCCGTGTCATCTCTTGCATGTTCACCATGCACGTCCTCAGAACTCCCCGTTTATCTGTATCAGGTGCAGGCCACCGATACTCTGGACTGATATCCTGTAAGTCCCACTTAGGAATCAGTATCAGTATTCAGTAACTCTATCCTAGTTGGTTTGTAGCTTGCACGGCCCTTTGTGTCGCGTCAAATCTTCAGACTAAATCCTTAGTTGAAACTGAATTGTGATTCGTAAGTTATGTATTTGAGGATTCCTCAGCATGCGTTCAACGATGAACTGCAATAATTTGAATGCACGAGGATTGTTT | |||||||||
gi|304467366|gb|HO263773.1|HO263773 CCTY2226.g1 CCTY Panicum virgatum Kanlow normalized leaf Panicum virgatum cDNA clone CCTY222 TGAAGCTGCCAGCATGATCTG EST sequence (targeted fragment marked with yellow): AAAGACAGATCATGGTGGAAGCTTCAACTCTCAAATAATGCTGGTCTCTTTGTACTGTCTTCCTCAGCTCTGCTGGGCATGGTTGCATCCATTGGCTCTGCGGGAACTTGAAAAGCTCGATGGTCACCCATGTTGTCACACTGCATGTGGACAGAGAAGAGCTATCACACCTGGAGCTCCCATCTGAAGCAAAGGGCAAAAAGTTGCTTGCAAATTCTGCAGATGGTAGCATTTTGTTGCTCATCCTGAAGGACCTTCAGATGTCACTATGGAAGCACAAAAGTGAGTCCAGCAGTGACTGGGTTTTTTCTCAAATGATCGATATGGCAGATTACTTGCCAATTAACAACGCTGTGTTGCAGTCAAGGGCAAAGGTAACATTGGAGATTTTTCGAGGGAAAAGCGGTGCAGTGGTGCTCTGGGTTGAGAAGGAAGGTCTTTTTTTTGTTCAGCCTCAGTGACCGATCGGTGCGGAAGCTTGACAATGAGCGTGTTACAACAAAGTACCACTTGTGCCCATATGAGATGGATTGGGTGTCTTGTCTAGTAGTCACAAAGCTCATAGCTGATGGCTCATCGTCTCTGGATGTAGGAAGGAAGAAGGTGCAAGGGAGATGGAATACCTTGATGACAAAAGTATAGAAAAGACGCATTAGCTTTGAGGCAAGACATGCTGTTAATCTGGTTTGTGGGTGCCATGACAAAGATGGTGTCATTGTTCTTAAGCCATTGTCGGTTCAGTTCAGTCTATTGACGCTGACATGGTATTTAAGG | |||||||||
gi|169727895|gb|FE657277.1|FE657277 CBYZ13141.b1 CBYZ Panicum virgatum Kanlow 4 day old seedlings Panicum virgatum cDNA clone CB TGAAGCTGCCAGCATGATCTG EST sequence (targeted fragment marked with yellow): ATACCACATAGCTCACGAGTGATTCCTAAGTAGATAAACAAGCTGTTACTGATCTGCGATAGAGTGATACGTCACCAAGCCTTTTGGCATCTTTGCTTGTCTTTGTGAGCATAACTGAAAAACTAGCACTAGTTATCCTGAATCCGGTTGTTCCATCAGCCATTGAGCTGGCATCTGTAAGTATGTAACTTGGGAACACATACATACCCATGATTATCTTGGAATGGACGATTGGAACATAACGCTTGACAGCAGCACTGCCAAATCATCATATACAGAATCTGCTGGGAGCTTCAGAC | |||||||||
gi|304537097|gb|HO333410.1|HO333410 CFHC3606.b1 CFHC Panicum virgatum U518 normalized leaf Panicum virgatum cDNA clone CFHC3606 TGAAGCTGCCAGCATGATCTG EST sequence (targeted fragment marked with yellow): ATCAAAGATAATGGGCCATGTTAAATGTGTGATTAAATTCCTGAAAGACAAGCAGCTTCTCCAGCCACCAATTATTGCATCTGCTTTTGCAATTGTCATTGGTGTTGTCCCATTCTTGAAGAATTTTGTGCTTACAGATGATGCACCTCTCTTCTTTTTCACAGACAGCTGTCTGATTCTTGGGGAAGCTATGATCCCGTGCATTTTACTTGCTGTCGGTGGCAATCTCGTTGATGGTCCTGGTGAAGGAAGTAAGAGGCTTGGTGTGCGTACAACCGTTGCTATAATTTTTGCACGGTTGATCTTGGTCCCACTTGCTGGGGTTGGCATCATCTTGTTAGTTGATAAACTTGGTTTCATTCCAAAAGATGACAAAATGTTCAAGTTTGTCCTGCTACTGCAGCATTCTATGCCCACATCAGTGCTGTCAGGTGCTGTTGCAAACCTGAGAGGGTGTGGTAAAGAATCAGCTGCAATCTTGTTCTGGGTTCACATTTTTGCCGTGTTCTCTATGGCAGGATGGATCATTTTCTATTTGAGCTTGCTCTTCTAAACACCTTACCGCACAGGAAGATCTTTGAAAGAAAATATCATCCAAGTATCACGAAAATAGCGAGATGGTATGTACAATAGCCTGTAAATCATGGTGACAGCTTCAGAGGCTCTATGAATTGTATCAGCATAGAATA | |||||||||
gi|304546790|gb|HO347176.1|HO347176 CFHF5702.g1 CFHF Panicum virgatum U601 normalized leaf Panicum virgatum cDNA clone CFHF5702 TGAAGCTGCCAGCATGATCTG EST sequence (targeted fragment marked with yellow): ATGTTCAAGTTTGTCCTGCTACTGCAGCATTCTATGCCCACATCAGTGCTGTCAGGTGCTGTTGCAAACCTGAGAGGGTGTGGTAAAGAATCAGCTGCAATCTTGTTCTGGGTTCACATTTTTGCCGTGTTCTCTATGGCAGGATGGATCATTTTCTATTTGAGCTTGCTCTTCTAAACACCTTACCGCACAGGAAGATCTTTGAAAGAAAATATCATCCAAGTATCACGAAAATAGCGAGATGGTATGTACAATAGCCTGCAAATCATGGTGACAGCTTCAGAGGCTCTATGAATTGTATCAGCATAGATATACGGTAATTGTGGTTCTGCTGCTTCTGTTGCAAGCAGTGGGTGAAGATGGCACATCGGTGTTGCCCTGCCCGGTCACAGAGAACCATTTAGATAGGGATGCCAGGTTCTTCCAATCAATACCCAGCTTTTCAGTTTTTCTTTGTTCCAAAGTCCAAACAATATAGTACCATATGATCGTATTAAATCGTCGACATGGTTCAAGTG | |||||||||
gi|198307551|gb|FL973331.1|FL973331 CCHY11630.b1 CCHY Panicum virgatum callus (N) Panicum virgatum cDNA clone CCHY11630 5', mRNA TGAAGCTGCCAGCATGATCTG EST sequence (targeted fragment marked with yellow): CAGTGCAAGGATGACAGTAATGCGACATTTGTTTTTCTATGTTTATTTTATTGTTTGGTTTATGTAATTGGTGTCTGGATATCTTTTTTCCCTGTGCAGAATAAGTCATGCATCCTACTGTTGAAGAAAAACAGTTGGGTAGAAGTATTTGGATATTATGACCTTGTCGGGGAAAATAACTATAGCAGCCTCCTTTTTTGGAATTGTTCAGTTAGGACTTTCAGTTCATTCTGGCACCTTCAATACTCCTGTTCTCCTAGCAATCATTTGGTGCTGCAAGCTGAACATCGTTTAATACTTGATTGCACTACAGTTGTGTCTGCATATTTTTTTCTACTAAAAGTTTGATTGAACTTATCTGGGTGAGGCTGATTTCTACTTCTTTTGTGCAGCAGGCATATTCTCCTGAGGAATGGGAACTGGTTACATTGGTGCTTACACGACCTAGCTATCAGATTAAGTTCAAACATACTGGTGAAGTTATATTTGATGAGAAGTACTCACCAAATCTACAGACAAAAATTCCGAATGGGCGCACTACTCAATTTGTATTAGTAAGTTCTACGGGCGCAAACCTACCGTTTAATACACAGGGACTATCAGAGCCAAACAATGAGGACCACGATGTTAGGTTACGTGACCTAATTGTATTAATCATGAGAACCTTCCAGAAAAGACTCTAGATGCTAAAAAGGAAAGGCAAGGCTTAGAATCCATGTAGATGTGTACGAA | |||||||||
gi|304527824|gb|HO327226.1|HO327226 CFHB5564.b1 CFHB Panicum virgatum U418 normalized leaf Panicum virgatum cDNA clone CFHB5564 TGAAGCTGCCAGCATGATCTG EST sequence (targeted fragment marked with yellow): GGACATTACTAGGTCATATTGGCAGGTTCAAAAGCATCTGTTACTCGGGCCATGCAAAGAGCTGAGAGGTACCGGACTGAACTGCTCAAACGAGGTGTTCTTCTTATTCCAGTGATATTTGGCGCTTCTCAGAAAGACCAAACCAAACCAAGGGGTTTCGGTACAAGAAGAGTTGCTGCATCAGCTCCTTCAGTTGGGGGTGACTTTGAAAAACGTACTGAATCTATTGCAGCAAAGTCACGTTTGAAAGCTGAAGTTCGGTTTAAGGCAGATATTGTCTCTCCTGAACAGTGGGAAAGTTGGATACGTGACCAGCAAGAGTCTGAAGGCGTCACTCCTGGTGAAGATGTCTACATAATCCTTCGTCTGGATGGCCGTGTCAGAAGATCTGGAATAGGTATGCCAAACTGGAACGACATATTACAAGAACTGCCACGACTTGAAGATCTTATGAGCAAACTTGAACGGTGAAAAAGGTTTTTACCTCTGATGTCAGTAACAAACAGTTTATTGGTAGAGATACATGAATATTGTTTATGGTAAATCGATTGGATGAGTGGTCGCCAATGGGTTGAATATATTCTGTTCCTGGAACTTCAGTGCAGATTGTCACTTCTCACAAACCAACTAATCTATGTAGAGAGGAACCAATCCAATCTATCCAAATTATAAAATTTCACGGATTGCTCGTGAA | |||||||||
gi|169717190|gb|FE646091.1|FE646091 CBYZ6182.g1 CBYZ Panicum virgatum Kanlow 4 day old seedlings Panicum virgatum cDNA clone CBY TGAAGCTGCCAGCATGATCTG EST sequence (targeted fragment marked with yellow): AAGGAAGTAAGAGGCTTGGTGTGCGTACAACCGTTGCTATAATTTTTGCACGGTTGATCTTGGTCCCACTTGCTGGGGTGGGCATCATCTTGTTAGTTGATAAACTTGGTTTCATTCCAAAAGATGACAAAATGTTCAAGTTTGTCCTGCTACTGCAGCATTCAATGCCCACATCAGTGCTGTCAGGTGCTGTTGCAAACCTGAGAGGGTGTGGTAAAGAATCAGCTGCAATCTTGTTTTGGGTTCACATTTTTGCCGTGTTTTTTATGGCAGGATGGATCATTTTTTATTTGAGCTTGTTTTTTTAAGTATGTCGATCCGCACTTGCACCTGTTTGCTGCAAGACCTTGCTATTTATTTTGATTTGATATTTAATCAAATGATTTGCAGACACCTTACCGCACAGGAAGATTTTTGAAAGAAAATATCATCCAAGTATCACGAAAATAGCGAGATGGTATGTACAATAGCCTGTAAATCATGGTGACAGCTTCAGAGGCTTTATGAATTGTATCAGCATAGATATACGGTAATTGTGGTTTTGCTGCTTTTGCTGCAAGCAGTGGGTGAAGATGGCACATCGGTGTTGCCCTGCCCGGTCACAGAGAACCATTTAGATAGGGATGCCAGGTTTTTCCAATCAATACCCAGCTTTTCAGTTTTTTTTTGTTCCAAAGTCCAAACAATATAGTACCATATGATCGTATT | |||||||||
gi|304546789|gb|HO347175.1|HO347175 CFHF5702.b1 CFHF Panicum virgatum U601 normalized leaf Panicum virgatum cDNA clone CFHF5702 TGAAGCTGCCAGCATGATCTG EST sequence (targeted fragment marked with yellow): ATGTTCAAGTTTGTCCTGCTACTGCAGCATTCTATGCCCACATCAGTGCTGTCAGGTGCTGTTGCAAACCTGAGAGGGTGTGGTAAAGAATCAGCTGCAATCTTGTTCTGGGTTCACATTTTTGCCGTGTTCTCTATGGCAGGATGGATCATTTTCTATTTGAGCTTGCTCTTCTAAACACCTTACCGCACAGGAAGATCTTTGAAAGAAAATATCATCCAAGTATCACGAAAATAGCGAGATGGTATGTACAATAGCCTGTAAATCATGGTGACAGCTTCAGAGGCTCTATGAATTGTATCAGCATAGATATACGGTAATTGTGGTTCTGCTGCTTCTGTTGCAAGCAGTGGGTGAAGATGGCACATCGGTGTTGCCCTGCCCGGTCACAGAGAACCATTTAGATAGGGATGCCAGGTTCTTCCAATCAATACCCAGCTTTTCAGTTTTTCTTTGTTCCAAAGTCCAAACAATATAGTACCATATGATCGTATTAAATCGTCGACATGGTTCAAGTG | |||||||||
gi|304517919|gb|HO315523.1|HO315523 CFHA430.g1 CFHA Panicum virgatum K101 normalized leaf Panicum virgatum cDNA clone CFHA430 3' TGAAGCTGCCAGCATGATCTG EST sequence (targeted fragment marked with yellow): GAAAGTGGATTCCACACTCGCCGAGAGACAACCGACGGCAGTCCAATCTATGAAACTTGTTCGAAGGTGCACTTCAATCCCAATTTGCGGTTCGAGATTGTCGACCTGCGTTCTGGTGCATGATCAATGAAAGCAAAGCTATAGCAGCTTGTTCTTCCTTACGCACCCTTGTGGCGGAAGTATATACCACATAGCTCACGAGTGATTCCTAAGTAGATAAACAAGCTGTTACTGATCTGCGATAGAGTGATACGTCACCAAGCCTTTTGGCATCTTTGCTTGTCTTTGTGAGCATAACTGAAAAACTAGCACTAGTTATCCTGAATCCGGTTGTTCCATCAGCCATTGAGCTGGCATCTGTAAGTATGTAACTTGGGAACACATACATACCCATGATTATCTTGGAATGGACGATTGGAACATAACGCTTGACAGCAGCACTGCCAAATCATCATATACAGAATCTGCTGGGAGCTTCAGGC | |||||||||
gi|198119560|gb|FL850271.1|FL850271 CCGH27581.b1 CCGH Panicum virgatum late flowering buds + seed development (L) Panicum virgat TGAAGCTGCCAGCATGATCTG EST sequence (targeted fragment marked with yellow): AAAAGATGACAAAATGTTCAAGTTTGTCCTGCTACTGCAGCATTCTATGCCCACATCAGTGCTGTCAGGTGCTGTTGCAAACCTGAGAGGCTGTGGTAAAGAATCAGCTGCAATCTTGTTCTGGGTTCACATTTTTGCCGTGTTCTCTATGGCAGGATGGATCATTTTCTATTTGAGCTTGCTCTTCTAAACACCTTACCGCACAGGAAGATCTTTGAAAGAAAATATCATCCAAGTATCACGAAAATAGCGAGATGGTATGTACAATAGCCTGTAGATCATGGTGACAGCTTCAGAGGCTCTATGAATTGTATCAGCATAGATATACGGTAATTGTGGTTCTGCTGCTTCTGCTGCAAGCAGTGGGTGAAGATGGCACATCGGTGTTGCCCTGCCCGGTCACAGAGAACCATTTAGATAGGGATGCCAGGTTCTTCCAATCAATACCCAGCTTTTCAGTTTTTCTTTGTTCCAAAGTCCAAACAATATAGTACCATATGATCGTATTAAATCCTCGACATGGTTCAAGTGTATTTGTCTGAGATGTCTACGTTGAGAGCGATGAGAGTTCGTGTTCAAATAGTGTAAGCTGTACAGATACCTCACCTCTTATGCTACTGTCCATGCCCATTACGGTGTTTACTTTGAAACCCG | |||||||||
gi|197956836|gb|FL697164.1|FL697164 CCGA5168.b1 CCGA Panicum virgatum apex + stem (H) Panicum virgatum cDNA clone CCGA5168 5', m TGAAGCTGCCAGCAT-GATCTG EST sequence (targeted fragment marked with yellow): TTACACGAGGCTTGGATGAAATTCAGAACAATGATTTATCATCAAATACATATGCTTCTATTTTAGGGTCATCTCTTTCTCGAAGTGCATCTCCAGATCCTGAGCTTGTGAGGAGGGCCCCTAGTCCATCTCTACCTCCAATTGGTGTGAAAGTTAGTGCTAATGACAAGAAGATTAATGGTGGTTCATCTTCTTTCCGTCGTAGTTCATCTGCTATAGGTGAACCTGATGATCTTATGGCAGCTCTATCTGGGATGAGCTTATCGTCTAGGACAATGAGTGGGCAAACTATGGACCAGTCTCAGCTCTATCAGGACGTTGATAATGTCCAGAAGTTTCTGTTCGATCGACAGGGTGACCAAGCAAATGGCAATCAGCAGCACTCCTACATGAGACGTCCTGAGCATGGACAGTCTAAAGTACCTGATGGCTATTCGGCAAATTTAGCCAATTCATCTACGATGAGAAACCAGATTAATGCTGGCAGTTTCACATCATTTGACAATTTGTCACTTGGATCTGGCTTTGCTTCCCCTAGGATTGGTTCTAGATCCCCTGGAGGGACTGTATCGTCTCGACAAAATTTAGCTGGTATGTCTAACATGCTAAACTACAGTGGAATTGGAAGTCCGACTGCATCACCTTCTCTTCAGACTCCTATTGATCCAGCATATATCCAGTACCTTGCTCAACTTGCAGCTACCTGTGATGATCCACTGATGGACAGGGGCCATGTGGGGAATTCTTACATGGACTTACTTGGTCCTCAGAAAGCTAACC | |||||||||
gi|198360377|gb|GD024086.1|GD024086 CCHZ11502.b1 CCHZ Panicum virgatum abiotic and biotic stress treatments (N) Panicum virgatum TGAAGCTGCCAGCATGATCTG EST sequence (targeted fragment marked with yellow): GAGGGTAAAGTTGTTGGACCTGCACACTCACAGCTAACTGAATTTAGCAAAGCTGGAAAGCTTGGTGATTCAATTAATGATCATGTGCATAGGAGAGGTGATTCTTCAAGAAACACTCACCATGCTCCTAAAGACAGATCAGCTAATAAGTTCGGAAAGGGACAGGGAGAAAGTTCAACTGATTCATTACCAGCTGATATGAGGAATAACATTCAACATGGCCAACCCCCCGAGAGTGCTTCACAGCTGCAACCTGTGACTGTACCAGATGATTTGGCAGCTTCACTTGATTATGAGTCTCAGCGTGCCAAAATGAAGGAGTTGGCTGTAGAACGTGCAAAAAAGTTGAAAGCTGAGGAGGAGGAACGGATAAAGAACCAAAAAGCAAAAGCTCAAGCGAAATTGGAAGAACTGAACAGACGATCTTCAGTACTTCAGAAGAAACCAAACGATACAAAAGTAGAAGCTGACGATGCGCATGATAAGCAAAAGGCTCTCCTTGATATGACTGCTAAGCCTGCCACTTCAACTGCTGAGCCCTGTGATGATACTGCAGCTGACGAGACTGTTCTTCCACCTCCTAATGATCCCAAGCATGCTGTGGTAAATGTACAGCCCCAGACTACTGAACT | |||||||||
gi|304536018|gb|HO332937.1|HO332937 CFHC3306.g1 CFHC Panicum virgatum U518 normalized leaf Panicum virgatum cDNA clone CFHC3306 TGAAGCTGCCAGCATGATCTG EST sequence (targeted fragment marked with yellow): TGTTCAAGTTTGTCCTGCTACTGCAGCTTTCTATGCCCACATCAGTGCTGTCAGGTGCCGTTGCAAACTTGAGAGGGTGTGGTAAAGAATCAGCTGCAATCTTGTTCTGGGTTCACATTTTTGCCGTGTTCTCTATGGCAGGATGGATCATTTTCTATTTGAGCTTGCTCTTCTAAACACCTTACCGCACAGGGAGATCTTTGAAAGAAAATATCATCCTAAGTATCACGAAAATAGCGACATTATATGTACAATAGCCTGTAAATCATGGTGACAGCTTCAGAGTCTGTGAATTGTATCAGCATAGATATACGGTACCTCCCAATGCTACGGTAATTGTGGTTCTGCTGCTGCTGCTGCTGCTGCTGCTGCAAGCAGTGGGTGAAGATGGCACCGCGGTGTGTTGCCCTGCAGTTCACAGAGAACCATTTAGATAGGGATGCCAGGTTCTTCCAATCAAGACCCAGCTTTTCAGTTTTTCTTTGTTCCAAACAATATAGTACCATGTGATCGTATTCAATCCTCGACAGGGTTCAAGTGTATTTGTCTGAGATGCCTACGTTGGGAGTTCGTGTTCAAATAGTGTAGCTGTACAGATACG | |||||||||
gi|304453639|gb|HO252467.1|HO252467 CCTW887.b1 CCTW Panicum virgatum Carthage normalized leaf Panicum virgatum cDNA clone CCTW88 TGAAGCTGCCAGCATGATCTG EST sequence (targeted fragment marked with yellow): GGGGAGATAAAAAAGAATGTGCCACTTCTGTAGGATCAAGGATAATGGGCCATGTTAAATGTGTGATTAAATTCCTGAAAGACAAGCAGCTTCTCCAGCCACCAATTATTGCATCTGCTTTTGCAATTGTCATTGGTGTTGTCCCATTCTTGAAGAATTTTGTGCTTACAGATGATGCACCTCTCTTCTTTTTCACAGACAGCTGTCTGATTCTTGGGGAAGCTATGATCCCGTGCATTTTACTTGCTGTCGGTGGCAATCTCGTTGATGGTCCTGGTGAAGGAAGTAAGAGGCTTGGTGTGCGTACAACCGTTGCTATAATTTTTGCACGGTTGATCTTGGTACCACTTGCTGGGGTTGGCATCATCTTGTTAGTTGATAAACTTGGTTTCATTCCAAAAGATGACAAAATGTTCAAGTTTGTCCTGCTACTGCAGCATTCTATGCCCACATCAGTGCTGTCAGGTGCTGTTGCAAACCTGAGAGGGTGTGGTAAAGAATCAGCTGCAATCTTGTTCTGGGTTCACATTTTTGCCGTGTTCTCTATGGCAGGATGGATCATTTTCTATTTGAGCTTGCTCTTCTAAACACCTTACCGCACAGGAAGATCTTTGAAAGAAAATATCATCCAAGTATCACGAAAATAGCGAGATGGTATGTACATAGCCTGTAAATCATGGTGACAGCTTCAGAGGCTCTATGAATTGTATCAGCATAGATA | |||||||||
gi|304489002|gb|HO289225.1|HO289225 CFBY797.g1 CFBY Panicum virgatum Dacotah normalized leaf Panicum virgatum cDNA clone CFBY797 TGAAGCTGCCAGCATGATCTG EST sequence (targeted fragment marked with yellow): GTACCAGAAGCTGTCGCAATTGTGGTGCACCCACCGATCCTACCAGGAGTTACGGAATATTTAGGCTAACTGATCCTGGAGGGATGGAGGTGCTTAGGGGGTGCGATGAAAGTGGATTCCACACTCACCGAGAGACAACCGACGGCAGTCCAATCTATGAGACTTGTTCGAAGGTGCACTTCAATCCCAATTTGCGGTTCGAGATTGTCGACCTGCGTTCTGGTGCATGATCAATGAAAGCAAAGCTATAGCAGCTTGGTCTTCCTTACGCACCCTTGTGGCGGAAGTATATACCACATAGCTCACGAGTGATTCCTAAGTAGATAAACAAGCTGTTACTGATCTGCGGTAGAGTGATACGTCACCAAGCCTTTTGGCATCTTTGCTTGTCTTTGGGAGCATAACTGAAAAACTAGCACTAGTTATCCTGAATCCGGTTGTTCCATCAGCCATTGAGCTGGCATCTGTAAGTATGTAACTTGGGAACACATACATACCCATGATTATCTTGGAATGGATGATTGGAACATAACGCTTGACAGCAGCACTGCCAAATCATCATATACAGAATCTGCTGGGAGCTTCAGACAATGCATGTATTAACATGAGAACTTTCTGAAAACTAGGGTGAAAGTGGTATATATTGGTGATTTTAGAGTCTGTATAATGGTACGTTTGGTTTCTAAAATGGGATGTCTGTCCAAAGAAAATAGAGTTGCTATTCAAGCAACATCCATATAAAGTTCCCTTGTG | |||||||||
gi|304469305|gb|HO262031.1|HO262031 CCTY1251.g1 CCTY Panicum virgatum Kanlow normalized leaf Panicum virgatum cDNA clone CCTY125 TGAAGCTGCCAGCATGATCTG EST sequence (targeted fragment marked with yellow): CTCTGGTTTATGCAAAATACAGGAGAGAATGATCCAACAACTAGAACTTCGTTAAGGTTTACAAGTCAGGATCAGTGAGGAGGTCATTGGACATCACCCGGTTCTCTAACTATGCTGAACTTCGAGAGGAACTGGGTCAGATGTTCGGCATTAAGGGTCAGTTGGACGACCCTGATAGATCAGGCTGGCAGCTTGTATTTGTCGACAGGGAGAATGATGTGCTTCTCCTTGGAGACGACCCGTGGGAGTCATTTGTGAATAGTGTATGGTACATCAAGATACTTTCACCTGAGGATGTGCATAAGATGGGAAAGCAAGGAAATGATCCACGCTACCTATCTTAAATGGATACATGTAGCCTTTTCTGGCTCCCATGACGATTCTGCGGCACAAGGTAGCACTCCTGCTCGTGACAGTCTGCTCCGCCGTGCTCGCTTGTTCGCCCGTGTCATCTCTTGCATGTTCACCATGCACGTCCTCAGAACTCCCCGTTTATCTGTATCAGGTGCAGGCCACCGATACTCTGGACTGATATCCTGTAAGTCCCACTTAGGAATCAGTATCAGTATTCAGTAACTCTATCCTAGTTGGTTTGTAGCTTGCACGGCCCTTTGTGTCGCGTCAAATCTTCAGACTAAATCCTTAGTTGAAACTGAATTGTGATTCGTAAGTTATGTATTTGAGGATTCCTCAGCATGCGTTCAACGATGAACTGCAATAATTTGAATGCACGAGGATTGTCT | |||||||||
gi|169727896|gb|FE657278.1|FE657278 CBYZ13141.g1 CBYZ Panicum virgatum Kanlow 4 day old seedlings Panicum virgatum cDNA clone CB TGAAGCTGCCAGCATGATCTG EST sequence (targeted fragment marked with yellow): ATACCACATAGCTCACGAGTGATTCCTAAGTAGATAAACAAGCTGTTACTGATTTGCGATAGAGTGATACGTCACCAAGCCTTTTGGCATTTTTGTTTGTTTTTGTGAGCATAACTGAAAAACTAGCACTAGTTATCCTGAATCCGGTTGTTCCATCAGCCATTGAGCTGGCATCTGTAAGTATGTAACTTGGGAACACATACATACCCATGATTATCTTGGAATGGACGATTGGAACATAACGCTTGACAGCAGCACTGCCAAATCATCATATACAGAATTTGCTGGGAGCTTCAGAC | |||||||||
gi|198116877|gb|FL840711.1|FL840711 CCGH21908.b1 CCGH Panicum virgatum late flowering buds + seed development (L) Panicum virgat TGAAGCTGCCAGCATGATCTG EST sequence (targeted fragment marked with yellow): GATAGATCAGGCTGGCAGCTTGTATTTGTCGACAGGGAGAATGATGTGCTTCTCCTTGGAGACGACCCGTGGGAGTCATTTGTGAATAGTGTATGGTACATCAAGATACTTTCACCTGAGGATGTGCATAAGATGGGAAAGCAAGGAAACGATCCACGCTACCTATCTTAAATGGATACACGGAGCCTTTTCTGGCTCCCATGACGATTCTGCGGTACATGGTAGCATTCCTGCTCGTGACAGTCTGCTCCGATGTGCTTGCATGTTCGCCCGGGGTCATCTCTTGCATGTCCACCATGCGCGTCTTCGGAACTCCCCGTTTATCTGTATCTGGTGCAGGCCACCGATACTCTGGACTGATATCTTGTAAGTTCCACTTAGGAATCAGTATCAGTATTCAGTAACTCTATCCTAGTTGGTTTGTACTTTGTAGCTCGCACGGCGCTCGTGTCACGTCAAATCTTCGGACTAAATCTTTTAGTTGAAACTGTATTGTGATTCGTAAAGTTATGTATTGAGGATTCCTCAGCACGCGTTCGACGATGAACTGCAATAATTTGAATGCACGAGGATTGTTTTAAATTTTT | |||||||||
gi|197980420|gb|FL722471.1|FL722471 CCGB6481.g3 CCGB Panicum virgatum apex + stem (L) Panicum virgatum cDNA clone CCGB6481 3', m TGAAGCTGCCAGCATGATCTG EST sequence (targeted fragment marked with yellow): ACTCTTCTGGTTTATTGCAAAATACAGGAGAGAATGATCCAACAACTAGAACTTCGTTAAGGTTTACAAGTCAGGATCAGTGGGGAGGTCATTGGACATCACCCGGTTCTCTAACTATGCTGAACTTCGAGAGGAACTGGGTCAGATGTTCGGCATTAAGGGTCAGTTGGACGACCTGATAGATCAGGCTGGCAGCTTGTATTTGTCGACAGGGAGAATGATGTGCTTCTCCTTGGAGACGACCCGTGGGAGTCATTTGTGAATAGTGTATGGTACATCAAGATACTTTCACCTGAGGATGTGCATAAGATGGGAAAGCAAGGAAATGATCCACGCTACCTATCTTAAATGGATACATGTAGCCTTTTCTGGCTCCCATGACGATTCTGCGGCACAAGGTAGCACTCCTGCTCGTGACAGTCTGCTCCGCCGTGCTCGCTTGTTCGCCCGTGTCATCTCTTGCATGTTCACCATGCACGTCCTCAGAACTCCCCGTTTATCTGTATCAGGTGCAGGCCACCGATACTCTGGACTGATATCCTGTAAGTCCCACTTAGGAATCAGTATCAGTATTCAGTAACTCTATCCTAGTTGGTTTGTAGCTTGCACGGCCCTTTGTGTCGCGTCAAATCTTCAGACTAAATCCTTAGTTGAAACTGAATTGTGATTCGTAAGTTATGTATTTGAGGATTCCTCAGCATGCGTTCAACGATGAACTGCAATAATTTGAATGCACGAGGATTGTTT | |||||||||
gi|198210521|gb|FL921602.1|FL921602 CCGO13727.b1 CCGO Panicum virgatum root (H) Panicum virgatum cDNA clone CCGO13727 5', mRNA s TGAAGCTGCCAGCATGATCTG EST sequence (targeted fragment marked with yellow): CAACCGGATCAACCTTATCAAGTTCCTAGCAGTGCGGTTCTCCCTAGCCCAACGTCACTACCAAGCCACTTGCGTGAAAAATTTGGATTCTCTGATCCTAATGTGAACTCTTCCAGCTACATCAGCTCTAGCATCCACGAAAACATGTTGGAATCGAATTTTCTTCAGGGTAGCTCGAAATGTGTGGACTTGTCTAGATTCAACCAACCATTAGTTAGCGAGCAGCAGCAGCAGCAGGCGTGGAAGCAAAAGTTTATGGGTTCACAATCAATGTCTTTTGGGGGCTCGGGTTCGCTTAACTCACCCACTAGCAAAGATGGTTCTGTTGACAACAAAGTTGGCCATGATGGGCAGAACCAGTCCCTTTTTAGCCCTCAAGTTGACAATTCTTCCCTACTGTACAATATGGTACCTAATCTGACTTCAAATGTTGCGGATAACAATATATCAGCGATTCCATCTGGATCAACATATCTGCAAAATCCGACGTACGGTTGTCTGGATGACTCTTCTGGTTTATTGCAAAATACAGGAGAGAATGATCCAACTACTAGAACCTTCGTTAAGGTTTACAAGTCAGGATCGGTGGGGAGGTCATTGGACATCACCCGGTTCTCTAACTATGCTGAACTTCGAGAGGAACTAGGTCAGATGTTCGGCATTAAGGGTCAGTTGGACGACCCTGATAGATCACGCTGGCAGCTTGTATTTGTCGACAGGGAGAATGATGTGCTTCTCCTTGGAGACGACCCGTGGAGTCATTTGTGAATAGTGTATGGTACATCAGATACTTTCACC | |||||||||
gi|198147651|gb|FL865782.1|FL865782 CCGI9122.g1 CCGI Panicum virgatum etiolated seedlings (H) Panicum virgatum cDNA clone CCGI91 TGAAGCTGCCAGCATGATCTG EST sequence (targeted fragment marked with yellow): TACTGCAGCATTCTATGCCCACCATCAGTGCTGTCAGGTGCCGTTGCAAACTTGAGAGGGTGTGGTAAAGAATCAGCTGCAATCTTGTTCTGGGTTCACATTTTTGCCGTGTTCTCTATGGCAGGATGGATCATTTTCTATTTGAGCTTGCTCTTCTAAACACCTTACCGCACAGGAAGATCTTTGAAAGAAAATATCATCCTAAGTATCACGAAAATAGCGACATTATATGTACAATAGCCTGTAAATCATGGTGACAGCTTCAGAGTCTGTGAATTTGTATCAGCATAGATATACGGTACCTCCCAATGCTACGGTAATTGTGGTTCTGCTGCTGCTGCTGCAAGCAGTGGGTGAAGATGGCACCGCGGTGTGTTGCCCTGCAGTTCACAGAGAACCATTTAGATAGGGATGCCAGGTTCTTCCAATAAATACCCAGCTTTTCAGTTTTTCTTTGTTCCAAACAATATAGTACCATGTGATCGTATTCAATCCTCGACAGGGTTCAAGTGTATTTGTCTGAGATGCCTACGTTGAGAGTTCGTGTTCAAATAGTGTAGCTGTACAGATACGTACCTCACCTCTTATGCTGCTGTCCATGCCCATTACGGTGTTTACTGTGAAACCCAACATCATGTCGTATCATGCAGAAACCGTGACTGTGCCCATTGCTTCCCCATACGTATTCCATGGATCTGATTGTCCGAAATCAAAA | |||||||||
gi|198009656|gb|FL749848.1|FL749848 CCGC3890.b1 CCGC Panicum virgatum early floral buds + reproductive tissue (H) Panicum virgat TGAAGCTGCCAGCATGATCTG EST sequence (targeted fragment marked with yellow): AAGAGACCTGCAGGTCATGTGGCAGCATCAGTGGCAAAGATAGCATTGGTCTGGAGGCACCTTGTGAGACTGCGCCTGGGAATCTTAGTGCTGAGAGTGAACTCCCCTATATGCCTAAAAATCGTGATGCTGCAACACATCATTCAAAGGAGTTCTTGGATTTTCTCGAACTGTTCAACGCACACCGGGAACTGTTTCTAAAAATTCTCCATGATCCTTCACTGCTAGCAACAGCTGAACAGCAAGGAGAAACTTCGTCAAGTGGTGCTGTACCGTTGAATAGATTGGAATCATTTCCAAGACCGGGAGGATCATCAGGGAAACGTAACCCTATATTTGATCGGAGTGATAGTGAGAAAAGCAGGAAGTTGGAACTCCAAAAATCACCCTCAAGGCCTAACAATGATGTAGAAGCTGCAAAAGTCATCAGTACAAGAATGCCTTCCGGAGTCGATGGCTCAGCAGTTTCTCTTTCAGAATCAAGAAGCCTGAAGAAATCTGGAACAGCTTCAAATCGTTTTAAAGTTATCAGTAGGAAGATCAAAGATGTCGTAAAGGAGAACCGCAAGAGCTTGCTCGAATAACAAAGGATGGAGTTTTCCACAGACTGCCATATGGCCAAAAAATGTCCGAATTAACCAGGAGCCCCTCCACAGAGAAGTTTGTCCACGAGGAGAAACAAATACGAAGATCATATTCTATTGCAGATACGTAGAAAGTATTCGACACTTTATGAGTCGATTTCAGGGACTCAAAAGTTTCTCCAGAAAGATC | |||||||||