| mature miRNA: TGCAGTTGTTGCCTCAAGCTT species: Panicum virgatum database: miRNEST The numbers on the right side of the alignments show a score calculated for them. When calculating the score, a mismatch is given a score of 1, bulge: 2, and wobble: 0.5. |
| Predicted miRNA targets | |||||||||
gi|198121393|gb|FL846237.1|FL846237 CCGH25111.g1 CCGH Panicum virgatum late flowering buds + seed development (L) Panicum virgat TGCAGTTGTTGCCTCAAGCTT EST sequence (targeted fragment marked with yellow): ATCGGCTACATCACTATATTAGAGAGTTGAGAACGATGAAGAAAAACATGGAGGCTGTAACAAAACAGAGCCGGACATTGGAAGAAGCGAAACTTGGAGGCATGGAGGAGATTCAAGGATACCAGAAAGAGATTGCAAGTTTGAAGCAACAAGTGCAAATGCTCAAGGATCAGTCCCAAAAGAAAACAGAGGAACTAAAAACCGCGGAAGCAAATTCTGTGGCTTTACAGAAACAATCTGAAGGTTTACTTATGGAGTATGACCGTCTAATTGCAGAAAATGGGGATTTGAGGAACCAGCTGCAGTCACCCTGACCTCCGCATGTCCCGCTCCGCCCGGAAGAAGAATTCGTAACAGAAATTCTGCAATTTTGAAGAGCCTGATGTACTGTAAATTTTGGGCCTATAGGGTTAACTGCACCCGATTTTGTATTGAGTATTCCAGTGTTTCATAATCACGTATGTAATTGAGTAGATGATGACATGTCTGTATGTGCGGATCATTATGCTGTATGGCCTTATTATAGATATGCTTATTATGCTTTCGACATTCTTCAGATACTAGTATTTGTGAAATAACATGTTTGACTTC | |||||||||
gi|254540626|gb|GR879617.1|GR879617 SW_H39_6_L20_070_1 cDNA library of switchgrass vascular tissue derived by LCM Panicum virgat TGCAGTTGTTGCCTCAAGCTT EST sequence (targeted fragment marked with yellow): CGGGGGCCAAACTCCGTTTCGAATTCTAGGGTTTTGCTGCTCTCCGACCCCGAGCTCCGAAGGCCGCAGCATCGGGCGCGCCCCCCCTCGCGTGTGACCGAGATGGCGCTGCCGAATCAGGAGACCGTTGATTACCCCAGCTTCAAGCTCGTCATCGTCGGCGATGGTGGAACTGGTAAAACTACATTTGTGAAGAGGCATCTCACTGGAGAGTTTGAGAAGAAATATGAACCAACCATTGGTGTGGAAGTTCGTCCGTTGGATTTCACCACTAACTGTGGTAAGATCAGGTTCTACTGCTGGGATACCGCAGGGCAAGAGAAGTTTGGTGGCCTCAGGGATGGATACTATATCCATGGCCAGTGTGCGATCATCATGTTTGATGTAACCTCAAGGCTTACTTACAAGAATGTTCCTACGTGGCATAGGGACCTGTGCAGGGTCTGTGAAGACATCCCCATTGCCCTCTGCGGTAATAAGGTTGATGTGAAGAACAGGCAGGTCAAAGCCAAGCAGGTTACTTTCCACAGGAAGAAGAATCTGCAGTACTATGAAATTTCTGCCAAGAGCAACTACAACTTTGAGAAACCTTTCCTGTACCTTGCAAGGAAGCTGGCTGGTGATCCGAACCTTCACTTTGTTGAAGCTGTTGCTCTTAAGCCTCCGGAAGTTACCATCGACATGGCTATGCAGCAGCAGCATGAAGCTGAGCTTGCTGCAGCAGCTGCACAACCTCTTCCTGATGACGATGATGATCTGATTGAGTAGAAAGGATCATGAGTCTTGGACTTGAGCAGGAGTTGTGCCTTGCACGATTTAAGTTGTTCTAGGGTGGACTCTCTCTTGAGTTATCATTGTCTGGATCATCTTTTTCTCCTTGGACTTGTTGCAACTTTTGAGTGTGGAAATGGATTGGAATAGTCGT | |||||||||
gi|59871869|gb|DN151018.1|DN151018 5219_C05_F09 Switchgrass callus cDNA library Panicum virgatum cDNA clone 5219_C05_F09 5', mRN TGCAGTTGTTGCCTCAAGCTT EST sequence (targeted fragment marked with yellow): CCACGCGTCCGATTCCCTCCTCCTGTATGTAGCTTGTGCCTTGTAGCCCCTCACTCCCGAAATAGCAGCTCAGAATGGCTCCGCTCGCCTTTCGCGTCTCTCGAGCCGCAGCGGCGCGCCGTCGTCGTCTCAGATTAATGCAAGCGGCGGTGACAAGCTAGAGGCAGCAACTGCATATCTTGCAAGAAAATTGGTTTTCAGACCATACCTATGATTTTCTTGCAAGTTGTGCAGTTGTTGTCTCAAGCTTGCTGCCTCCCTTTGCCAAAACTATCAAGAAAGAACAGGTTATTCTATTGATGAACACATAGGTTAAAATTAAATGAATAAACATGTGTCTGTAACAAGCAGGACGTTAATTTATGAAATCTTGTTGGATGATGTAGCACTTCGCAGCATTATACTTAATATTGCAGATATTAGGTTCAAAACTTGGTTGTCCATTTTATAGCATGAAGTAGTATTTATTTTATTATCAGGAAATGAAAAGACCGGTTCTTCATATTGGCAATGTGGAGGTTATCTTAATGGTTT | |||||||||
gi|304502208|gb|HO299036.1|HO299036 CFCA5549.g1 CFCA Panicum virgatum Sunburst normalized leaf Panicum virgatum cDNA clone CFCA5 TGCAGTTGTTGCCTCAAGCTT EST sequence (targeted fragment marked with yellow): GTGAGCTTCGGGTTCGGTGTGCCGGCCTCAACCGTTCGCACGGCGCCACTCCCAGGTGACCCATCAGCCGAGATATCTTTTCCACGGTTGGTGGGGTGCCCTGGGAGACAAAGGAGGCGAAGGCGTCAGTCGACTACCGCTAGGCTCCCGCGAGTACTTCCTCCCACACATCCGCTGGTGGGGTTTGCCCGTCAACAGATGCCCTTCGCACCTCTAGCGGAAGGTCCTGTCAAGCGAGGTTCACCCTTCAGGCAGGCCTTGGCAGAAGTATTTCTGTGGCAGCCTTCGGCGGAAGCGGGCCCTAAGAAGTGGCTTTCACTTCGTCCCTTGTTGTGGCGCTTACCAAGCCCCTGTGGTTTACTATGAGGCCCTTCTGAGGAAGTCTACCATCGTGCTTACGCGGCCCTGAAACGAGGGAGGCAAGGTTGGACTTTGCTGGGGGCTTTGTATATCCCTTATTGGGCCTTTGTGCCCTTCTTTTGGTTTGTTGTAACTTAGTTTCGTTCCCTTATGCAATGTTCCGTGTGTTGGCTTGAGGCAGCAACTGCAATTTCGGAATCTGCCTGCGTGCGGTGTATCAAAGGCTTCAGCTTGCGTTTGTAATACATGTGATTTTAATGAGACTTATTACCCC | |||||||||
gi|198201602|gb|FL916734.1|FL916734 CCGO10558.g1 CCGO Panicum virgatum root (H) Panicum virgatum cDNA clone CCGO10558 3', mRNA s TGCAGTTGTTGCCTCAAGCTT EST sequence (targeted fragment marked with yellow): AGAAGAGCAGCAGTGTCGCAAATCCCAACTCAGAGCTTAAGTTTTGGCAAAGGGAGGCAGCAAGCTTGAGACAACAACTGCACAACTTGCAAGAAAATCATAGGCAGTTGATGGGAGAGGATCTTTCTGGGCTTAATGTTAAGGAACTGCAGTCCCTAGAGAATCAGTTGGAAACAAGCCTGCGTGGAGTCCGCGCAAAGAAGGACCATCTCTTGATTGATGAAATTCACGAATTGAATCGGAAGGCTACTTTATTTCATCAAGAAAACATGGACTTGTACAATAAGATCAACCAGATTCGTCAAGAAAATTCCGAGTTATATAAGAAGATCTATCAGACCGAAGGACCAAGTGAAGTTAATCAGGAATCACCGACTCCATACAACTTTGCAGTAGTAGAAAACACAGATGTTCCTGTGCAACTTGGACTCAGCACACTGCCACAACAGAACAGCATCGAGCCGTCGACTGCTCCAAAGCTCGGATTGCAGTTAAATCCATGAAACAGAGTCAAATCACTATTCCTATTATGCTGTTGTAAAGAGATGATACTCAGCAAGACAAAACAATGTATTTATGGCAGAGAGATTTGAGATATGAATTTGTAAATGCACTGCAAATAAATTCCAGACTGGAATTGAGCTGTGGAATTCAGTGGATGATTGTTTTCTAGCTGCATATGATGTTAGATGTTCTCATATT | |||||||||
gi|169727779|gb|FE657239.1|FE657239 CBYZ13116.g1 CBYZ Panicum virgatum Kanlow 4 day old seedlings Panicum virgatum cDNA clone CB TGCAGTTGTTGCCTCAAGCTT EST sequence (targeted fragment marked with yellow): GGCTCCCTGCAAGAAGGCCACCCCCGGCGGCCACCCCGGCTGCGCGCAGCGCACGCATCGGGCCGGGAATCCACCTCAGATTTCGCTTGCTCCCCTCCCTCCCCCCGCGGCGTCCCCCCCGTCTCTCTCTCCGCGCTGGTGAGCCCCCGCGGGCGACGTGTGTCCCCTGTCCCGCGGGGGGTTTCCTCGCCTTCGACGGCCATCTGTTCGCCTCGCATGGCTCCCCTCCTGCCAAGCGTCCTCGCGTCGTCCCGGGAGCGCCTCCGCTCGCCAGGCGGCCGAGCGCCGCGGCGTCCAGCACAGATCCGCGCGCCGCCCAGCTAATCGCCGCGCCACTTCCTCAGACTCCCATCTCTAATAGCTCACCCGCATCCCCCGTGCTCGGCGCGGCCTTCTCTTCCTTGCCTCCTCCTGTATGTAGCTTATAGCTTGTAGCTCCCTCACTCCCAAACTAGCAGCTCAGAATGGCTCCGCTTGCCTTTAATTTCGCATCTCTCGAGCCGCAGCGGCACGCCGTCGTCGTCTCAGATTAATGCAAGGGGTGGTGACAAGCTAGAGGCAGCAGCTGCATATCCTGCAAGAAAATTCAGGCAGCGGCATCACTCGTCCCCTGGCGTCGCTTGCGGCAACCGCGGTGATCCTCCGCACTCTCCGAGCTCCTCGTGCTGGCGTGCGAGCTCTGGCGGCCACGGCCATCCTCTGCGCGCTCCGAGCTCCTCGCGCTGGCCTGCGAGTTCT | |||||||||
gi|254541880|gb|GR878111.1|GR878111 SW_H39_2_G10_041_1 cDNA library of switchgrass vascular tissue derived by LCM Panicum virgat TGCAGTTGTTGCCTCAAGCTT EST sequence (targeted fragment marked with yellow): TGATGTGAAGAACAGGCAGGTCAAAGCCAAGCAGGTTACTTTCCACAGGAAGAAGAATCTGCAGTACTATGAAATTTCTGCCAAGAGCAACTACAACTTTGAGAAACCTTTCCTGTACCTTGCAAGGAAGCTGGCTGGTGATCCGAACCTTCACTTTGTTGAAGCTGTTGCTCTTAAGCCTCCGGAAGTTACCATCGACATGGCTATGCAGCAGCAGCATGAAGCCGAGCTTGCTGCAGCAGCTGCACAACCTCTTCCTGATGACGATGATGATCTGATTGAGTAGAAAGGATCATGAGTCTTGGACTTGAGCAGGAGTTGTGCCTTGCACGATTTAAGTTGTTCTAGGGTGGACTCTCTCTTGAGTTATCATTGTCTGGATCATCTTTTTCTCCTTGGACTTGTTGCAACTCTTGAGTGTGGAAATGGATTGGAATAGTCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA | |||||||||
gi|169690941|gb|FE620080.1|FE620080 CBYY2624.b1 CBYY Panicum virgatum Kanlow crown Panicum virgatum cDNA clone CBYY2624 5', mRNA TGCAGTTGTTGCCTCAAGCTT EST sequence (targeted fragment marked with yellow): GAGATTTCGAATCCACCTCAGATTTCGCTTGCTCCCCTCCCTCCCCCCGCGGCGTCCCCCCCGTCTCTCTCTCCGCGCTGGTGAGCCCCCGCGGGCGACGTGTGTCCCCTGTCCCGCGGGGGGTTTCCTCGCCTTCGACGGCCATCTGTTCGCCTCGCATGGCTCCCCTCCTGCCAAGCGTCCTCGCGTCGTCCCGGGAGCGCCTCCGCTCGCCAGGCGGCCGAGCGCCGCGGCGTCCAGCACAGATCCGCGCGCCGCCCAGCTAATCGCCGCGCCGCTTCCTCAGACTCCCATCTCTAATAGCTCACCCGCATCCCCCGTGCTCGGCGCGGCCTTCTCTTCCTTGCCTCCTCCTGTATGTAGTTTATAGCTTGTAGCTCCCTCACTCCCAAACTAGCAGCTCAGAATGGCTCTGCTCGCCTTTAATTTCGCATCTCTCGAGCCGCAGCGGCACGCCGTCGTCGTCTCAGATTAATGCAAGGGGTGGTGACAAGCTAGAGGCAGCAACTGCATATCTTGCAAGAAAATTGTAAGTAAATAACTTCGTAATTACTCTCAGTTATGTGTCAGAAAATGACTGAATATTATACAAGTACATAGAATCATTATTGTGCTGCATCTTACAGTTGTTTTAAGAAAAAGTTGGTGGGAGTTT | |||||||||
gi|254545890|gb|GR877307.1|GR877307 SW_H38_4_O14_049_1 cDNA library of switchgrass vascular tissue derived by LCM Panicum virgat TGCAGTTGTTGCCTCAAGCTT EST sequence (targeted fragment marked with yellow): AACTCCGTTTCGAATTCTAGGGTTTTGCTGCTCTCCGACCCCGAGCCCCGAAGGCCGCAGCATCAGGCGAGGCCCCCCTCGCGTGTGACCGAGATGGCGCTGCCGAATCAGGGGACCGTTGATTACCCCAGCTTCAAGCTCGTCATCGTCGGCGATGGTGGAACTGGTAAAACTACATTTGTGAAGAGGCATCTCACTGGAGAGTTTGAGAAGAAATATGAACCAACCATTGGTGTGGAAGTTCATCCGTTGGATTCCACCACTAACTGTGGTAAGATCAGGTTCTACTGCTGGGATACCGCAGGGCAAGAGAAGTTTGGTGGCCTCAGGGATGGATACTATATCCATGGCCAGTGTGCGATCATCATGTTTGATGTAACCTCAAGGCTTACTTACAAGAATGTTCCTACGTGGCATAGGGATCTGTGCAGGGTCTGTGAAAACATCCCCATTGTCCTCTGCGGTAATAAGGTTGATGTGAAGAACAGGCAGGTCAAAGCCAAGCAGGTTACTTTCCACAGGAAGAAGAATCTGCAGTACTATGAAATTTCTGCCAAGAGCAACTACAACTTTGAGAAACCTTTCCTGTACCTTGCAAGGAAGCTGGCTGGTGATCCGAACCTTCACTTTGTTGAAGCTGTTGCTCTTAAGCCTCCGGAAGTTACCATCGACATGGCTATGCAGCAGCAGCATGAAGCCGAGCTTGCTGCAGCAGCTGCACAACCTCTTCCTGATGACGTTGATGATCTGATTGAGTAGAAAGGATCATGAGTCTTGGACTTGAGCAGGAGTTGTGCCTTGCACGATTTAAGTTGTTCTAGGGTGGACTCTCTCTTGAGTTATCATTGTCTGGATCATCTTTTTCCCCTTGGACTTGTTGCAACTTTTGAGTG | |||||||||
gi|198350344|gb|GD016394.1|GD016394 CCHZ6855.b1 CCHZ Panicum virgatum abiotic and biotic stress treatments (N) Panicum virgatum TGCAGTTGTTGCCTCAAGCTT EST sequence (targeted fragment marked with yellow): GATGCAGGGACTCCTGAGCTCCACTTTCAGAGGGTGATCCAGATTAGCCAGCAGCATAGCATTGTGAGGCCAGGATCAGCTAACCGAAGCCAACGGGCAGCTAGTCCGGAAGCGGATAGGCTGGTCTGGGCAATCCAACGCACCCATAACTCTTTAGAAGCAGCAAGGCGGCAAAAGCTGGATGGCGACAATAAGGTGGGTGGAAATGGTGCTGCTAAGAGGGATGGATGCTGCCAATGCAGCTCCAGCTTTGAGTGCAATATCTGTCTTGACCCGGCTAAAGAGCCCGTGGTTACACCTTGCGGTCATCTCTTCTGCTGGCCATGCTTGTACCAGTGGCTTCATTCTCATTCAGCACACTCTGAGTGCCCTGTCTGCAAGGGCGAGGTGCTTGAAGTGAATGTCACTCCGATTTATGGAAGAGGCGGTGAAGAAGGCGATTCTGCTAACCTTGACATGCCACCCAGGCCGCGAGCAAACAGAAGGGAGAGCCTGAGGCAGCAGCTGCAAACGACAGCAGACACAAGAGGAATTGCAACAGTAGTGAGGCAGTTGATAGAAAACCAGGGCATAGTGAGAGGCCTCCCGAGCCCAGCAGCGATTGAGATGACCGTGGTTCCTGGAGGCCGGCAAAGGGCTAGGGCTCGGAGACAGCAAAGGCAAGATAACAATGCGTCGTCTATCATACCTGCAACTGCAATAATGCTGAATACGGGCAATGCTGCCTCTGAGAAGCAGCAATCAAATACCATTGCCACTT | |||||||||
gi|198050694|gb|FL776292.1|FL776292 CCGF8004.g1 CCGF Panicum virgatum early floral buds + reproductive tissue (L) Panicum virgat TGCAGTTGTTGCCTCAAGCTT EST sequence (targeted fragment marked with yellow): CAGAACTCATCGCGAGACGAGGCCATGGCCCATGGAGATGGCGAAGGGCGCAAAGACAAGAGCAAGGTAAAATATTATAATTGTCAAGATTATGGACATTTTGCTTGGGAGTGTCCTAAGAAGGGAAAGGAGGAGAAAGCTTTGTTAGCTCAAGGCTACGGTAGCGACGAACCTACTCCTCTCTGAAGTAGATCAAGGATGGCGAATCAAGATTAGGGGGGAAATTGTTAGAACTAATCTTGATTCATGTATCTCTCTCTGCATGTTTTTTTTGTCTTGCAAATAGTAGGCCACATGCTAATATGAAATGTGTACGTGAGATACGTGCATAGTTATTAGTTTAGTTTCAGTTCATGGCAAGGTGCCGACGTGCTGTGTGACGCGGACGTCCCCATGCGAAGTGGTGTTGCACAAAGAGCAGAGGAGCTGGAGGCAACAACTGATGGAAGGCTAACGTTGTGTGAAGCAGCGAAAGGAGAGGCCAAGTTGTTAGCATGTGCACAGATCGTGGGTGAGTACTAGTCTAGTTTGCATGGTCAGTAGCAAGTAGTTGGAGTCAGTAGAGTACTTGGTCTTCCTAGCTTGTAGGGGGGATGAGAATTTCATGCAGCGATGGGTCAAGCCGTGATGTGAAGCTTGGCATGCATGACCGTAACTGCCGGCTAGTGGGGAAGTGCTACTCGTAGTTATCCTTTGCATGTACTTGAGTCTATTTATATGAATGAAAATGACGAGAGCTGTGTGGACTGCGTC | |||||||||
gi|169676600|gb|FE609433.1|FE609433 CBYX8525.g1 CBYX Panicum virgatum Kanlow callus Panicum virgatum cDNA clone CBYX8525 3', mRN TGCAGTTGTTGCCTCAAGCTT EST sequence (targeted fragment marked with yellow): AGAGGCGGTGAAGAAAGGAGATTCTTGCTACCCTTGACATGCCACCCAGGCCGCGAGCAAACAGAAGGGAGAGCCTGAGGCAGCAGCTGCAAATGACAGACACAAGAGGAATAGCAACAGTAGTGAGGCAGTTGATAGAAAACCAGGGCATAGTGAGAGGCCTCCCGAGCCCAGCAGAGATTGAGATGACCGTGGTTCCTGGAGGCCGGCAAAGGGCTAGGGCTCGGAGACAGCAAAGGCAAGATAATAATGCATCGTCTATCATACCTGCAACTGCAATAATGCTGAATATGGGCAATGCTGCCTCTGAGAGCAGAAATCAAATACCGTTGCCACCTTCTAATTCTGACAATATTGCACCGGCAGCTCCTCAGCAGTCATCATCTGTGGAGCAAATGTCGAATTCTAGCACCGCAGCTGTTATCATGGGAGGGCCTGGGTCAAGTAGGCGGTCAAGACCTTCGGAGTCCACAATCACAAGAAGAACAAGGAGGCGGCAACAGTAGGTACCAGAGTGCTGTCACTCTCTTCAATAAAACCTACATACCATGCCCCATTGGTGGTTAATTAACATTTCAAGGTTAATAACATTAGGAATGTATAGCCATCGCTTGTTCCCGCCTTTCTTTTACATACCATGTATGTAGCTTCATCATGGAAAATGAGTCGAAATGTCAGTTCCAACATC | |||||||||
gi|198380533|gb|GD045987.1|GD045987 CCHZ24334.g1 CCHZ Panicum virgatum abiotic and biotic stress treatments (N) Panicum virgatum TGCAGTTGTTGCCTCAAGCTT EST sequence (targeted fragment marked with yellow): TCAGAAGTGCTTTTTGCCACTTAACGAATGCCTGAAGCTGAAGGCAGCAACTGTGCATTTTGCATTGAGGACAGCATTGGATATGTTTTTACTGAAATTCCGAAGGGATTGCCTCATATTGAGACTCTACGTGTTGAAGTGATTGTGAAAACTCAGATACATGGATTTATGAAGGCTCCTCTCAGATTTATGCATTTAAGGAATTTGATCATGGACATGACCTTTGGATATGCTAAACGATTGAGTAAAAATGCAGTCCTTCAATTAGCTTATCTGTTGGAAGCAGCTCCCTTTTTGGTGAACCTACATGTGGATATGTGCTGTGCATTTTGTAGTGAGCGCCGCCCTAAAAAAGACGTGATTGCGGATCACCCTCACCATAACCTGAAGGATGCCTGCATAACCGGTTTTAATGGCAATGGAGGCCACGT | |||||||||
gi|198171471|gb|FL885166.1|FL885166 CCGN6093.b1 CCGN Panicum virgatum etiolated seedlings (L) Panicum virgatum cDNA clone CCGN60 TGCAGTTGTTGCCTCAAGCTT EST sequence (targeted fragment marked with yellow): GATGAAAACTCAGCGCAGTTATTTAGTTATACACAAAGGGCACTGTCATTCATGATATTACACAAAGGGCAAGGTGTTCATACGATATTACACAACGGAGCTCACAACGACACAGCTATTACATCCAATCCAGCTCCTTATTCTGCAAGTCTGTTTAGCGCTTCAGGCAGCAATTGCATGTGGAAGACGAGGGATCCTTAAGCGCTAGCACTCTCTTCCACAGGCTTGAATTCCTGCAGCTCCTTGAAGTTCTCCCATGGCTTCTCCCAGGCCTTAGCTTCATAGAGCTTCTTGGCGGGGCCCATCCTTCACCTCAACAGTGAGATAGTACATGGTTCCAGCAACCACTTGCGTCTTCGCCTTCACAAGCTTCTCGAACTCCAGGAGAGCATTGGTCTTCTTGTTGTGCTCGTCGACGGCGAAGCGGGCGAGCTCCTGGAGGTGGATGTCGTTGTCGTTCTGCGGCGCGTCCGTGACGCCGCCCGCCAGCGGCCCGCGATCGGCCATGGGCGGCTCCTCTTGCGCGCTGCGGGTGAGCGAGAGGGTGAGGGTGAGGGTGAG | |||||||||
gi|304525867|gb|HO323498.1|HO323498 CFHB3570.b1 CFHB Panicum virgatum U418 normalized leaf Panicum virgatum cDNA clone CFHB3570 TGCAGTTGTTGCCTCAAGCTT EST sequence (targeted fragment marked with yellow): GATGACAATCTCTACAGTAGGTGTTCCTAACACAATAAAAATGCTAGCATCTCACAAGCTTCAGTCAACACCTGCAGTGAGCCTGCATGCCCCAAATCAGAAGCTACGGGAAACAATTGTTCCTAGCGCAAAGTCTTACCCCTTGGGAGCACTAATGGGTGACTGCAAGAGCTACTTCCTCGAAACTGGACGCAGGGTATCCTTCGAGTACACTCTGCTAGCTGGGACCAATGATGAAAGGGAGCATGCCGAAGAACTTGCAGGATTGCTTCGCACATGTGGAGGTGGTTATCATGTGAACCTAATTCCCTATAACCCAATTGAAGGTTCTGAATACAAGAGGCCATACAGAAAAGTGGTTCAAGCGTTTGCTGATGCATTAGAAGCAAGGAAGATAACTGTCAGTGTTAGACAGACCCGGGGGCTAGATGCTAACGCAGCCTGTGGTCAGCTGAGAAATGAATTCCAGAAGAATCCGCTTCTTGAATCTTCAACCTCAGAGCCCAATCTCGTACCTTTATGATGAAGGGCTGGAGTGCGTGTAGATTATAACATTTTAAAGCCTTTTCGGGCATCATTTTCAGGCATGACTGCACGAGGTTTCAGTTTTACTGAGAAAATAGGTGTTGTCACTAGAAAAGTCAAGCAATTATGTAGACATAAAGCTAAGGAATTTTGGAACATTCTGTTATGCCCCACCAATCATGTAACCGAGCTTACATTGATACCATGAATACAATTCAGTAGTCAT | |||||||||
gi|198324378|gb|FL993599.1|FL993599 CCHY22595.b1 CCHY Panicum virgatum callus (N) Panicum virgatum cDNA clone CCHY22595 5', mRNA TGCAGTTGTTGCCTCAAGCTT EST sequence (targeted fragment marked with yellow): GGGGGGCGGCGGTCGCTTCCTCGCTCACTGACTTAGTAGCTTATAGCTTGTAGCTCCCTCACTCCCAAACTAGCAGCTCAGAATGGCTCCGCTTGCCTTTAATTTCGCATCTCTCGAGCCGCAGCGGCACGCCGTCGTCGTCTCAGATTAATGCAAGGGGTGGTGACAAGCTAGAGGCAGCAGCTGCATATCCTGCAAGAAAATTGGTTTTCAGACCATACCTATGATTTTCTTGCAAGTTGTGCAGTTGTTGTGTCAAGCTTGCTGCCTCCCTTTGCGAAAACTATCAAGAAAAGCACAGGTTATGTTATTGATGAACACATAGGTTAAAATTAAATGAATGAGCATGTGTCTGTAACAAGCAGGATGTTAATTTATGAAATCTTGTAGCATAAAGTAGCACTTCTCAGCATTATACTTATACCACAGATATTAGGTTCAAAACTTGGTTGTCCATTTTATAGCATGAAGTAGTATTTATTTTATTATTAAGGAAATGCAAAAACCGGTTCTCCATATTGGCAATGTGTGGCTATCTTAATGGTTTCTTTTAGCATTGGTCATCATGCAGTATGCTAAGGTGGCGCTTACTGAACTAGCAAACTATGTATTTCGGCTGACACTGTTGCCACTGTGCAGTGGCAAGCAAACTCTATGAAGAAACAAGGGTGCACCGTTGTCTGCCAGTGTTAATCCTTCTGTAGTTAATGTTCAG | |||||||||
gi|197956977|gb|FL699788.1|FL699788 CCGA6477.g1 CCGA Panicum virgatum apex + stem (H) Panicum virgatum cDNA clone CCGA6477 3', m TGCAGTTGTTGCCTCAAGCTT EST sequence (targeted fragment marked with yellow): GCTTGAAGTGAATGTCACTCCGATTTATGGAAGAGGCGGTGAAGAGGCGATTCTGCTAACCTTGACATGCCACCCAGGCCGCGAGCAAACAGAAGGGAGAGCCTGAGACAGCAGCTGCAAATGACAGCAGACACAAGAGGAATTGCAACAGTAGTGAGGCAGTTGATAGAAAACCAGGGCATAGTGAGAGGCCTCCCGAGCCCAGCAGCGATTGAGATGACCGTGGTTCCTGGAGGCCGGCAAAGGGCTAGGGCTCGGAGACAGCAAAGGCAAGATAACAATGCGTCGTCTATCATACCTGCAACTGCAATAATGCTGAATACGGGCAATGCTGCCTCTGAGAGCAGCAATCAAATACCATTGCCACCTTCTAATTCTGACAATATTGCACCAGCGGCTCCTGCAGCTCCTCAGCAGTCATCATCTGTGGAGCAAATGTCGAATTCTAGCACCAGAGCTGTTATCATGGGAGGGCCTGGGTCAAGTAGGCGGTCAAGACCTTCGGAGTCCACAATCACAAGAAGAACAAGGAGGCGGCAGCAGTAGGTACGAGAGTGCTGTCACTCTCTTCAATAAAACCTACAGACCATGCCCCATTGGTGGTTAATACCATGATTTGCATCAATGACATCTCAAGGTTAATAACATTAGGAATGTATAGCCATCGCTTGTTCCCACCTTTCTTTTACATACCATGTATGTTGCTTCATCATGGAAAAGGAGTCGAAATTTCAGTTCC | |||||||||
gi|198289536|gb|FL955886.1|FL955886 CCHY2176.b1 CCHY Panicum virgatum callus (N) Panicum virgatum cDNA clone CCHY2176 5', mRNA s TGCAGTTGTTGCCTCAAGCTT EST sequence (targeted fragment marked with yellow): GGCGCGGCCTTCTCTTCCTTGCCACCTCCTGAATGTAGCTTATAGCTTGTAGCTCCCTCACTCCCAAACTAGCAGCTCAGAATGGCTCCGCTTGCCTTTAATTTCGCATCTCTCGAGCCGCAGCGGCACGCCGTCGTCGTCTCAGATTAATGCAAGGGATGGTGACAAGCTAGAGGCAGCAGCTGCATATCCTGCAAGAAAATTGGTTTTCAGACCATACCTATGATTTTCTTGCAAGTTGTGCAGTTGTTGTCTCAAGCTTGCTGCCTCCCTTTGCCAAAACTATCAAGAAAAGCACAGTATGCTGAGGTGGCGCTTACTGAACTAGCAAACTATGTATTTCGGCTGACACTGTTGCCACTGTGCAGTGGCAAGCAAACTCTATGAAGAAACAAGGGTGCACCGTTGTCTGCCAGTGTTAATCCTTCTGTAGTTAATGTTCAGAGTACTCAACTCAATGTCTACACTGCGCTTTATTCTGCTTTCTTTGGTTTGCAAGGTCGGAGGAGGTATGGGAACAAATGGAAGTTCAGTTGTATTTGAACTGCCCTTCATATCTATAGGCAGTTTCTGGTGTAGACTATTGGAGATTGGAGTTATGAGATGATCGACAACAGTACTAGAAATTATACATTTCGGTGTCTTGCTTAGCCAAACTCAACTGGCAAATATGCCATTTGCAGTGAAGTAAAAATTGCT | |||||||||
gi|197978594|gb|FL719163.1|FL719163 CCGB4762.b1 CCGB Panicum virgatum apex + stem (L) Panicum virgatum cDNA clone CCGB4762 5', m TGCAGTTGTTGCCTCAAGCTT EST sequence (targeted fragment marked with yellow): GCTGCTAAGAGGGATGGATGCTGCCAATGCAGCTCCAGCTTTGAGTGCAATATCTGTCTTGACCCGGCTAAAGAGCCCGTGGTTACACCTTGCGGTCATCTCTTCTGCTGGCCATGCTTGTACCAGTGGCTTCATTCTCATTCAGCACACTCTGAGTGCCCTGTCTGCAAGGGCGAGGTGCTTGAAGTGAATGTCACTCCGATTTATGGAAGAGGCGGTGAAGAAGGCGATTCTGCTAACCTTGACATGCCACCCAGGCCGCGAGCAAACAGAAGGGAGAGCCTGAGGCAGCAGCTGCAAATGACAGCAGACACAAGAGGAATTGCAACAGTAGTGAGGCAGTTGATAGAAAACCAGGGCATAGTGAGAGGCCTCCCGAGCCCAGCAGCGATTGAGATGACCGTGGTTCCTGGAGGCCGGCAAAGGGCTAGGGCTCGGAGACAGCAAAGGCAAGATAACAATGCGTCGTCTATCATACCTGCAACTGCAATAATGCTGAATACGGGCAATGCTGCCTCTGAGAGCAGCAATCAAATACCATTGCCACCTTCTAATTCTGACAATATTGCACCAGCGGCTCCTGCAGCTCCTCAGCAGTCATCATCTGTGGAGCAAATGTCGAATTCTAGCACCAGAGCTGTTATCATGGGAGGGCCTGGGTCAAGTATGCGGTCAAGACCTTCGGAGTCCACAATCACAAGAAGAACAAGGAGCGGCAGCAGTAGGTACGAGAGTGCTGTCACTCTCTTCATAAAACCTACAGACCATGCCCCATTGGTGGTAATACCATGATTTGCATCATAACA | |||||||||
gi|198083323|gb|FL810786.1|FL810786 CCGG11993.g1 CCGG Panicum virgatum late flowering buds + seed development (H) Panicum virgat TGCAGTTGTTGCCTCAAGCTT EST sequence (targeted fragment marked with yellow): AGTGCCCTGTCTGCAAGGGCGAGGTGCTTGAAGTGAATGTCACTCCGATTTATGGAAGAGGCGGTGAAGAAGGAGATTCTGCTACCCTTGACATGCCACCCAGGCCGCGAGCAAACAGAAGGGAGAGCCTGAGGCAGCAGCTGCAAATGACAGACACAAGAGGAATTGCAACAGTAGTGAGGCAGTTGATAGAAAACCAGGGCATAGTGAGAGGCCTCCCGAGCCCAGCAGGGATTGAGATGACCGTGGTTCCTGGAGGCCGGCAAAGGGCTAGGGCTCGGAGACAGCAAAGGCAAGATAATAATGCATCGTCTATCATACCTGCAACTGCAATAATGCTGAATATGGGCAATGCTGCCTCTGAGAGCAGAAATCAAATACCGTTGCCACCTTCTAATTCTGACAATATTGCACCGGCAGCTCCTGCAGCTCCTCAGCAGTCATCATCTGTGGAGCAAATGTCGAATTCTAGCACCGCAGCTGTTATCATGGGAGGGCCTGGGTCAAGTAGGCGGTCAAGACCTTCGGAGTCCACAATCACAAGAAGAACAAGGAGGCGGCAACAGTAGGTACCAGAGTGCTGTCACTCTCTTCAATAAAACCTACATACCATGCCCCATTGGTGGTTAATTAACATTTCAAGGTTAATAACATTAGGAATGTATAGCCATCTCTTGTTCCCGCCTTTCTTTTACATACCATGTATGTAGCTTCATCATGGAAAACGAGTCGAAATGTCAGTTCCAAC | |||||||||