| mature miRNA: TGCAGTTGTTGTCTCAAGCTT species: Panicum virgatum database: miRNEST The numbers on the right side of the alignments show a score calculated for them. When calculating the score, a mismatch is given a score of 1, bulge: 2, and wobble: 0.5. |
| Predicted miRNA targets | |||||||||
gi|304525867|gb|HO323498.1|HO323498 CFHB3570.b1 CFHB Panicum virgatum U418 normalized leaf Panicum virgatum cDNA clone CFHB3570 TGCAGTTGTTGTCTCAAGCTT EST sequence (targeted fragment marked with yellow): GATGACAATCTCTACAGTAGGTGTTCCTAACACAATAAAAATGCTAGCATCTCACAAGCTTCAGTCAACACCTGCAGTGAGCCTGCATGCCCCAAATCAGAAGCTACGGGAAACAATTGTTCCTAGCGCAAAGTCTTACCCCTTGGGAGCACTAATGGGTGACTGCAAGAGCTACTTCCTCGAAACTGGACGCAGGGTATCCTTCGAGTACACTCTGCTAGCTGGGACCAATGATGAAAGGGAGCATGCCGAAGAACTTGCAGGATTGCTTCGCACATGTGGAGGTGGTTATCATGTGAACCTAATTCCCTATAACCCAATTGAAGGTTCTGAATACAAGAGGCCATACAGAAAAGTGGTTCAAGCGTTTGCTGATGCATTAGAAGCAAGGAAGATAACTGTCAGTGTTAGACAGACCCGGGGGCTAGATGCTAACGCAGCCTGTGGTCAGCTGAGAAATGAATTCCAGAAGAATCCGCTTCTTGAATCTTCAACCTCAGAGCCCAATCTCGTACCTTTATGATGAAGGGCTGGAGTGCGTGTAGATTATAACATTTTAAAGCCTTTTCGGGCATCATTTTCAGGCATGACTGCACGAGGTTTCAGTTTTACTGAGAAAATAGGTGTTGTCACTAGAAAAGTCAAGCAATTATGTAGACATAAAGCTAAGGAATTTTGGAACATTCTGTTATGCCCCACCAATCATGTAACCGAGCTTACATTGATACCATGAATACAATTCAGTAGTCAT | |||||||||
gi|198085816|gb|FL808235.1|FL808235 CCGG848.b1 CCGG Panicum virgatum late flowering buds + seed development (H) Panicum virgatum TGCAGTTGTTGTCTCAAGCTT EST sequence (targeted fragment marked with yellow): AACAAGCTTATATATTTATTCAACAGGGGGGAGAACTTGTATCCTAATTGCAAGCAGCGATTGCCATAATCTGAATACAATGTACAAGAGCAATGGGCCATTGAAGGCATCTCTTATGATCACTGCGAAAAATGATTCCAATTAAGTCTATAACAAGAGGAAAATGCTCTATTACAACATCACAACAAATCTCTAAAAGTACTATCAGAACATGCTTTTCGTGCCAAGAACTGAGGGTATATTTGTCAACGAGTTGCTCAGCTTGACCAGCACATCAGCCAACCCCACTGATTCTTCGATTTATTATTGTTGGCCATATATTCCCAAGAAAGAATTTATGCTAAACTGTCCATAACACCCTTTGATCACTTGTTAGGCCTTGGACTTTCTTGCTTGTGAGTACTGAAATACTCAGATTTCGTAGCCCTATTGTCGGTTTGCCGCTTCATTTACTTCACTGCCAGCAAGCTGCATCTCCTTTTGATAAGTTCATCAACTATAACAGGGCAATCTGACTCATTCTCCTCCAAATGACATTGTCTGTATCTTCTCGATTTGTGTGGGCCAGTTTGGACCAAGCGAGTGTGGATCAGCTTGAACAGCAACTGCAAAATCTTGCAAGGTTGTACACTGAGCCAGATTTTGTTGTTGCAATCCATTCATTCTACCAGCAAACTTCTCATTGACTTTACCAATTCTTTTACTGCTGGCTCTCACCCTCGACAAATCCATGCATGGTTTGATCAACCTTCGCAAGAACTCATCTAGTCCACGATTCAAGCATCACACCC | |||||||||
gi|198088644|gb|FL817343.1|FL817343 CCGG15590.b1 CCGG Panicum virgatum late flowering buds + seed development (H) Panicum virgat TGCAGTTGTTGTCTCAAGCTT EST sequence (targeted fragment marked with yellow): CCCCTCTCGTGCTCTGGACCTCGAGCCGCCGATCTGGGAGGGCCGGAGCGCCGCCCGCAGCGAGTCCCCCAACCCTCCCTGCCGCGGGAGCGGACGCCGCCCGCTCGCCGCGGCGCTGCAGGAGAGCTGCGCCTCCCGGCCGCCGCCCGCCGCAGATAGATGGCCACAAAACTCGATCAACCTTCTCCTGCCGAGCATCGGCGACCAAAATCCGCTGCACCACAATCTTTGACTCCCAAGATCTCGATATTCGGGACAAAAGCTGGATTCGTCATACCCAAGAACAAGCTAGCCGGCTCAATCGTAACCAGGGGCGCCACTTCCAAGAATGATACAGCAACTGCATCCAAGGAAGATAACAGCAGGCCTGCTCAGAGAAATACAAAGTGGGGGCCTGACCTCGCCGCCGACCCTGCCGTGTGCAAAGGAAGGGCTTTGGCCTACCAGACTCGAGTGGAGCAAATTACCAAGCAGCTGAAATCCGAAACTTTGGATATGGACGAAACTGAAGGTTCAATGTCCACTGGAAAAGGGTCAAATTCTGCTGGCACTGCAAATCTGAAAGACAATAAGCAGGGAAAGGTTGCGCTATTGGAACTTGAAAGAAGCGAAATTATTGGTGAAATACTCCGTCTGAATCCAGGATATAAGGTGCCTGAAAACTACAAACCAGTACTTAAGGAGGCAAAAATCCCTCTT | |||||||||
gi|169681252|gb|FE611857.1|FE611857 CBYX10393.b1 CBYX Panicum virgatum Kanlow callus Panicum virgatum cDNA clone CBYX10393 5', m TGCAGTTGTTGTCTCAAGCTT EST sequence (targeted fragment marked with yellow): GAAGCCCATCTTTGGGACAACAGCTGCAGAAGAGAAGGTCAGACTCGCAAGGGAAGACAAGTGTATCTTGGTGGATATGATAAAGAAGAGAAAGCGGCCAGGGCTTATGATCTAGCTGCTCTGAAGTACTGGGGCACTACAACGACTACAAATTTTCCAATGAGCAACTACGAAAAAGAGTTAGAAGAGATGAAGCATATGTCACGACAAGAATATGTCGCATCCCTTAGAAGGAAAAGCAGTGGATTTTCTCGTGGTGCGTCGATTTACCGAGGGGTTACAAGGCACCATCAGCATGGAAGGTGGCAAGCAAGAATAGGAAGGGTGGCAGGAAATAAGGATCTGTATTTGGGCACATTCTGTACCCAGGAGGAAGCAGCAGAGGCTTACGACATCGCTGCAATCAAATTCCGAGGTCTGAATGCAGTCACTAACTTTGACATGAGCCGGTACGACGTCAAGAGCATCATGGAGAGCAGCGCCCTACCAGTTGGTGGCACCACAAAGTGTCTCAGGGATGTGCCTGATCAATTTGGTATGGGCATGAACAGCAACTGTGCAGACTCTGCTAGCCATATGACTGCTACAAAGCCTCTTACTGATGGCATTGGCAGCTATGCCCATGAGAATTATGGTTACAGTGGCTGGTCGTCGTCCTCTGCCATGACGCCCATCCCCCTGCAATTCAGCAATGGCCATGAACACTCCAGACTGTGGTGCAAGCCAGAGCAGACAGTGCGGTTGTTGC | |||||||||
gi|169668343|gb|FE598471.1|FE598471 CBYX1659.b1 CBYX Panicum virgatum Kanlow callus Panicum virgatum cDNA clone CBYX1659 5', mRN TGCAGTTGTTGTCTCAAGCTT EST sequence (targeted fragment marked with yellow): CTTCCCAAGGATCAGAGCCAGTGCCGCCGCGTTCCGAGATGGGTTCCACCAACAACTGGCTCGGCTTCGCCTCGTTCTCCGGCGCCGCCGCAGCCGACGATGTCCTGCCCCCGATGCCGCCGGCCCGAGGCGATGAGGCGGGCGCGGAGCCGAAGCTCGAGGACTTCCTCGGCCTGCAGGAGCCGGCCGCCGCGGTGGCAGGACGGCCGTTCGCGGGGAGCGGCGGCGGCGCGAGCTCCATCGGGCTGTCCATGATCAAGAACTGGCTGCGCAGCCAGCCGGCGCCGGGACCTGCAGGGGCCGATTTGACGGCTCTTGCGGCGGTGGAAGCGGTGTCGACGGACGGGAGCAGGAAGGTGACTGACAGCGCGGAGAGCGTTGCCGCTGTGGTGGACACGGCGCAGCAGAGGAAGGCGGTGGCTGCGGTGGATACGTTCGGGCAGCGGACCTCCATATACCGCGGCGTCACGAAGCATAGATGGACAGGAAGGTATGAAGCCCATCTTTGGGACAACAGCTGCAGAAGAGAAGGTCAGACTCGCAAGGGAAGACAAGGTGGATATGATAAAGAAGAGAAAGCGGCCAGGGCTTATGATCTAGCTGCTCTGAAGTACTGGGGCACTACAACGACTACAAATTTTCCAGTACTACTTATTGGTCTATGTGTTATTAGTTCTCCAGAATTGATATTTTAAATGTCACTGCATATTGGAATGGATGTTATATTATTTTTCATTTTATGTCTAGATGG | |||||||||
gi|197956977|gb|FL699788.1|FL699788 CCGA6477.g1 CCGA Panicum virgatum apex + stem (H) Panicum virgatum cDNA clone CCGA6477 3', m TGCAGTTGTTGTCTCAAGCTT EST sequence (targeted fragment marked with yellow): GCTTGAAGTGAATGTCACTCCGATTTATGGAAGAGGCGGTGAAGAGGCGATTCTGCTAACCTTGACATGCCACCCAGGCCGCGAGCAAACAGAAGGGAGAGCCTGAGACAGCAGCTGCAAATGACAGCAGACACAAGAGGAATTGCAACAGTAGTGAGGCAGTTGATAGAAAACCAGGGCATAGTGAGAGGCCTCCCGAGCCCAGCAGCGATTGAGATGACCGTGGTTCCTGGAGGCCGGCAAAGGGCTAGGGCTCGGAGACAGCAAAGGCAAGATAACAATGCGTCGTCTATCATACCTGCAACTGCAATAATGCTGAATACGGGCAATGCTGCCTCTGAGAGCAGCAATCAAATACCATTGCCACCTTCTAATTCTGACAATATTGCACCAGCGGCTCCTGCAGCTCCTCAGCAGTCATCATCTGTGGAGCAAATGTCGAATTCTAGCACCAGAGCTGTTATCATGGGAGGGCCTGGGTCAAGTAGGCGGTCAAGACCTTCGGAGTCCACAATCACAAGAAGAACAAGGAGGCGGCAGCAGTAGGTACGAGAGTGCTGTCACTCTCTTCAATAAAACCTACAGACCATGCCCCATTGGTGGTTAATACCATGATTTGCATCAATGACATCTCAAGGTTAATAACATTAGGAATGTATAGCCATCGCTTGTTCCCACCTTTCTTTTACATACCATGTATGTTGCTTCATCATGGAAAAGGAGTCGAAATTTCAGTTCC | |||||||||
gi|197978594|gb|FL719163.1|FL719163 CCGB4762.b1 CCGB Panicum virgatum apex + stem (L) Panicum virgatum cDNA clone CCGB4762 5', m TGCAGTTGTTGTCTCAAGCTT EST sequence (targeted fragment marked with yellow): GCTGCTAAGAGGGATGGATGCTGCCAATGCAGCTCCAGCTTTGAGTGCAATATCTGTCTTGACCCGGCTAAAGAGCCCGTGGTTACACCTTGCGGTCATCTCTTCTGCTGGCCATGCTTGTACCAGTGGCTTCATTCTCATTCAGCACACTCTGAGTGCCCTGTCTGCAAGGGCGAGGTGCTTGAAGTGAATGTCACTCCGATTTATGGAAGAGGCGGTGAAGAAGGCGATTCTGCTAACCTTGACATGCCACCCAGGCCGCGAGCAAACAGAAGGGAGAGCCTGAGGCAGCAGCTGCAAATGACAGCAGACACAAGAGGAATTGCAACAGTAGTGAGGCAGTTGATAGAAAACCAGGGCATAGTGAGAGGCCTCCCGAGCCCAGCAGCGATTGAGATGACCGTGGTTCCTGGAGGCCGGCAAAGGGCTAGGGCTCGGAGACAGCAAAGGCAAGATAACAATGCGTCGTCTATCATACCTGCAACTGCAATAATGCTGAATACGGGCAATGCTGCCTCTGAGAGCAGCAATCAAATACCATTGCCACCTTCTAATTCTGACAATATTGCACCAGCGGCTCCTGCAGCTCCTCAGCAGTCATCATCTGTGGAGCAAATGTCGAATTCTAGCACCAGAGCTGTTATCATGGGAGGGCCTGGGTCAAGTATGCGGTCAAGACCTTCGGAGTCCACAATCACAAGAAGAACAAGGAGCGGCAGCAGTAGGTACGAGAGTGCTGTCACTCTCTTCATAAAACCTACAGACCATGCCCCATTGGTGGTAATACCATGATTTGCATCATAACA | |||||||||
gi|198083323|gb|FL810786.1|FL810786 CCGG11993.g1 CCGG Panicum virgatum late flowering buds + seed development (H) Panicum virgat TGCAGTTGTTGTCTCAAGCTT EST sequence (targeted fragment marked with yellow): AGTGCCCTGTCTGCAAGGGCGAGGTGCTTGAAGTGAATGTCACTCCGATTTATGGAAGAGGCGGTGAAGAAGGAGATTCTGCTACCCTTGACATGCCACCCAGGCCGCGAGCAAACAGAAGGGAGAGCCTGAGGCAGCAGCTGCAAATGACAGACACAAGAGGAATTGCAACAGTAGTGAGGCAGTTGATAGAAAACCAGGGCATAGTGAGAGGCCTCCCGAGCCCAGCAGGGATTGAGATGACCGTGGTTCCTGGAGGCCGGCAAAGGGCTAGGGCTCGGAGACAGCAAAGGCAAGATAATAATGCATCGTCTATCATACCTGCAACTGCAATAATGCTGAATATGGGCAATGCTGCCTCTGAGAGCAGAAATCAAATACCGTTGCCACCTTCTAATTCTGACAATATTGCACCGGCAGCTCCTGCAGCTCCTCAGCAGTCATCATCTGTGGAGCAAATGTCGAATTCTAGCACCGCAGCTGTTATCATGGGAGGGCCTGGGTCAAGTAGGCGGTCAAGACCTTCGGAGTCCACAATCACAAGAAGAACAAGGAGGCGGCAACAGTAGGTACCAGAGTGCTGTCACTCTCTTCAATAAAACCTACATACCATGCCCCATTGGTGGTTAATTAACATTTCAAGGTTAATAACATTAGGAATGTATAGCCATCTCTTGTTCCCGCCTTTCTTTTACATACCATGTATGTAGCTTCATCATGGAAAACGAGTCGAAATGTCAGTTCCAAC | |||||||||
gi|198289536|gb|FL955886.1|FL955886 CCHY2176.b1 CCHY Panicum virgatum callus (N) Panicum virgatum cDNA clone CCHY2176 5', mRNA s TGCAGTTGTTGTCTCAAGCTT EST sequence (targeted fragment marked with yellow): GGCGCGGCCTTCTCTTCCTTGCCACCTCCTGAATGTAGCTTATAGCTTGTAGCTCCCTCACTCCCAAACTAGCAGCTCAGAATGGCTCCGCTTGCCTTTAATTTCGCATCTCTCGAGCCGCAGCGGCACGCCGTCGTCGTCTCAGATTAATGCAAGGGATGGTGACAAGCTAGAGGCAGCAGCTGCATATCCTGCAAGAAAATTGGTTTTCAGACCATACCTATGATTTTCTTGCAAGTTGTGCAGTTGTTGTCTCAAGCTTGCTGCCTCCCTTTGCCAAAACTATCAAGAAAAGCACAGTATGCTGAGGTGGCGCTTACTGAACTAGCAAACTATGTATTTCGGCTGACACTGTTGCCACTGTGCAGTGGCAAGCAAACTCTATGAAGAAACAAGGGTGCACCGTTGTCTGCCAGTGTTAATCCTTCTGTAGTTAATGTTCAGAGTACTCAACTCAATGTCTACACTGCGCTTTATTCTGCTTTCTTTGGTTTGCAAGGTCGGAGGAGGTATGGGAACAAATGGAAGTTCAGTTGTATTTGAACTGCCCTTCATATCTATAGGCAGTTTCTGGTGTAGACTATTGGAGATTGGAGTTATGAGATGATCGACAACAGTACTAGAAATTATACATTTCGGTGTCTTGCTTAGCCAAACTCAACTGGCAAATATGCCATTTGCAGTGAAGTAAAAATTGCT | |||||||||
gi|198298108|gb|FL967083.1|FL967083 CCHY7963.g1 CCHY Panicum virgatum callus (N) Panicum virgatum cDNA clone CCHY7963 3', mRNA s TGCAGTTGTTGTCTCA-AGCTT EST sequence (targeted fragment marked with yellow): GGGAGCGCACCAGTAATCCAGGATTCTCAGCTGAATGGGTTCCCAGGTCCCGGTGGGAGGGGCGCGGAGATTTCGGTTCGATCTACAGACGAGTCATCGTACATGAATGATATCTTCTGATCTATATCCTGTGCTCAGTGCCGCCTCACTTTAGACTCGCTCCTCGCGAGGATCATGCCGGAGAGCTTGTCAACCTCGTAAAGGAGCCCGGCGGAGAACAGGAAGCATGTTGTGATACAGACGCGGTGGACAGTGCCAGCTACAATGAAGGAAACAAGCTGTGATACAACAACTGCACCCCACCCAGT | |||||||||
gi|169676600|gb|FE609433.1|FE609433 CBYX8525.g1 CBYX Panicum virgatum Kanlow callus Panicum virgatum cDNA clone CBYX8525 3', mRN TGCAGTTGTTGTCTCAAGCTT EST sequence (targeted fragment marked with yellow): AGAGGCGGTGAAGAAAGGAGATTCTTGCTACCCTTGACATGCCACCCAGGCCGCGAGCAAACAGAAGGGAGAGCCTGAGGCAGCAGCTGCAAATGACAGACACAAGAGGAATAGCAACAGTAGTGAGGCAGTTGATAGAAAACCAGGGCATAGTGAGAGGCCTCCCGAGCCCAGCAGAGATTGAGATGACCGTGGTTCCTGGAGGCCGGCAAAGGGCTAGGGCTCGGAGACAGCAAAGGCAAGATAATAATGCATCGTCTATCATACCTGCAACTGCAATAATGCTGAATATGGGCAATGCTGCCTCTGAGAGCAGAAATCAAATACCGTTGCCACCTTCTAATTCTGACAATATTGCACCGGCAGCTCCTCAGCAGTCATCATCTGTGGAGCAAATGTCGAATTCTAGCACCGCAGCTGTTATCATGGGAGGGCCTGGGTCAAGTAGGCGGTCAAGACCTTCGGAGTCCACAATCACAAGAAGAACAAGGAGGCGGCAACAGTAGGTACCAGAGTGCTGTCACTCTCTTCAATAAAACCTACATACCATGCCCCATTGGTGGTTAATTAACATTTCAAGGTTAATAACATTAGGAATGTATAGCCATCGCTTGTTCCCGCCTTTCTTTTACATACCATGTATGTAGCTTCATCATGGAAAATGAGTCGAAATGTCAGTTCCAACATC | |||||||||
gi|198350344|gb|GD016394.1|GD016394 CCHZ6855.b1 CCHZ Panicum virgatum abiotic and biotic stress treatments (N) Panicum virgatum TGCAGTTGTTGTCTCAAGCTT EST sequence (targeted fragment marked with yellow): GATGCAGGGACTCCTGAGCTCCACTTTCAGAGGGTGATCCAGATTAGCCAGCAGCATAGCATTGTGAGGCCAGGATCAGCTAACCGAAGCCAACGGGCAGCTAGTCCGGAAGCGGATAGGCTGGTCTGGGCAATCCAACGCACCCATAACTCTTTAGAAGCAGCAAGGCGGCAAAAGCTGGATGGCGACAATAAGGTGGGTGGAAATGGTGCTGCTAAGAGGGATGGATGCTGCCAATGCAGCTCCAGCTTTGAGTGCAATATCTGTCTTGACCCGGCTAAAGAGCCCGTGGTTACACCTTGCGGTCATCTCTTCTGCTGGCCATGCTTGTACCAGTGGCTTCATTCTCATTCAGCACACTCTGAGTGCCCTGTCTGCAAGGGCGAGGTGCTTGAAGTGAATGTCACTCCGATTTATGGAAGAGGCGGTGAAGAAGGCGATTCTGCTAACCTTGACATGCCACCCAGGCCGCGAGCAAACAGAAGGGAGAGCCTGAGGCAGCAGCTGCAAACGACAGCAGACACAAGAGGAATTGCAACAGTAGTGAGGCAGTTGATAGAAAACCAGGGCATAGTGAGAGGCCTCCCGAGCCCAGCAGCGATTGAGATGACCGTGGTTCCTGGAGGCCGGCAAAGGGCTAGGGCTCGGAGACAGCAAAGGCAAGATAACAATGCGTCGTCTATCATACCTGCAACTGCAATAATGCTGAATACGGGCAATGCTGCCTCTGAGAAGCAGCAATCAAATACCATTGCCACTT | |||||||||
gi|59871869|gb|DN151018.1|DN151018 5219_C05_F09 Switchgrass callus cDNA library Panicum virgatum cDNA clone 5219_C05_F09 5', mRN TGCAGTTGTTGTCTCAAGCTT EST sequence (targeted fragment marked with yellow): CCACGCGTCCGATTCCCTCCTCCTGTATGTAGCTTGTGCCTTGTAGCCCCTCACTCCCGAAATAGCAGCTCAGAATGGCTCCGCTCGCCTTTCGCGTCTCTCGAGCCGCAGCGGCGCGCCGTCGTCGTCTCAGATTAATGCAAGCGGCGGTGACAAGCTAGAGGCAGCAACTGCATATCTTGCAAGAAAATTGGTTTTCAGACCATACCTATGATTTTCTTGCAAGTTGTGCAGTTGTTGTCTCAAGCTTGCTGCCTCCCTTTGCCAAAACTATCAAGAAAGAACAGGTTATTCTATTGATGAACACATAGGTTAAAATTAAATGAATAAACATGTGTCTGTAACAAGCAGGACGTTAATTTATGAAATCTTGTTGGATGATGTAGCACTTCGCAGCATTATACTTAATATTGCAGATATTAGGTTCAAAACTTGGTTGTCCATTTTATAGCATGAAGTAGTATTTATTTTATTATCAGGAAATGAAAAGACCGGTTCTTCATATTGGCAATGTGGAGGTTATCTTAATGGTTT | |||||||||
gi|304542644|gb|HO343138.1|HO343138 CFHF3558.b1 CFHF Panicum virgatum U601 normalized leaf Panicum virgatum cDNA clone CFHF3558 TGCAGTTGTTGTCTCAAGCTT EST sequence (targeted fragment marked with yellow): CTGCAATTGAAAGAGATGTGTTCAGTGAAAAGAATAAGCTGTGACTTTTATGGAACCAAATTAACTGCATTTCCATCTTTGGAGGAACTTGAATTTGATGACTTGCCACGGTGGGTGTAGTGGACCCACGAAGAGAAGAACACTGAAGTGTTCCCTAAACTCCGTAAGTTGAGGCTTTTGAACTGTCCTGAGTTGATTAAGGTGCCTCATCTTCCTCTATCCGTGAGGAATGTCAAGGTAAAAAATACAGGTTTTATTTCACAAATGAAACTATCCTCCTCCTCACCATCATAAGCATGCAAGTTTGCATTAGATACATGCTCTGCCACCGTCCTCACAAATGGCTTGATGCACCAGCAACAAGTGGAAGCAATTGCTATTTTGACTCTGAGGAACTGTGAGGATGTAAAATTTAGAGCTTCAGGTGCTGACTTCCTTGAAGAGGCTGCAAATATCTCATTCAAGCATTAATGATGAGCAGTTGGGCACTTGTTTGAGGGGTTTACAAGCGCTTACCTGGCTGGAGACATCAACTGCAACAACATCACATGTCTTCCATGGATGGAAAATTCAGAGTGCTTAACAAAATTTCATGAGCTACACATTCAGCAGTGTCCTGAAGTTTCCTCTCTACACTCACTGCCAAGTTTTGCGGCACTAGAAAGTATATGATCGAAAATTGCTCTAAGGTCACATGGAATCTTTCCCTACCAACTTTAACAACAGTTCTCTAGAAGACTGAGCATTATGAATTGTGCTGAAGTTGGAGTCCG | |||||||||
gi|169679841|gb|FE605467.1|FE605467 CBYX6061.b1 CBYX Panicum virgatum Kanlow callus Panicum virgatum cDNA clone CBYX6061 5', mRN TGCAGTTGTTGTCTCAAGCTT EST sequence (targeted fragment marked with yellow): CGCTGTTACGCTGCAATAATCGCGTGATTAGTTGATTGATTTGCGCAAGCATGTGTTTTACGAGCTCTTTAGTGTTGTGGTTATGCTGTGCGTGTCTGCGTGTGCTGGTGTGCGTTTTTTTTTGCGGAGCTGCGTTTTTCCTGATCTGGCAACGAAAGATGCTGCCTTTCCACTATTCGTACTGCTGTACTTGTGGAGAATCGTACGCATGGGTAAAATGGCTGTGCAATGTTTCCCCTTTCCAGTTTTGGTATGGCTCTCGATATATGTGTATGCTTTTGGAATGAGCTTTTTGGTGGCCTGTGTCTTTTGATTCTGTTACTGCATCTAAATTGCAGGCATATCTTCTGTTTGCACTATTACATGGCTATCTATGCCAAGAATGTATGTTTGGTTTTTCTGATTGATTGGGTTTTGATAATCCAGGTTCCATGCTCTGTCAGAGTTTGATCAGAAGAAGAGGAGCTGCAGGAGGCGTCTGTCTGATCACAATGCCCGCCGGCGGAAGCCTCAGCCAGATGCGTACGCCTTTGCCTCTGCAAGGCTGCCTTCATCATTGTTTGATGATAGGCGGCAAATAAGTTTTGTCTGGAATAAAGCTCCTCTTAGCCATGTAAGACCTTTCAGTTCTTCTTGGGATAGCTCATCTGACTTCAAGCTTGCACATGCCAAGGAAATAAGAGAGCTATCAACAAAAGTTGAGACAACAACTGGACAAGTT | |||||||||
gi|169690941|gb|FE620080.1|FE620080 CBYY2624.b1 CBYY Panicum virgatum Kanlow crown Panicum virgatum cDNA clone CBYY2624 5', mRNA TGCAGTTGTTGTCTCAAGCTT EST sequence (targeted fragment marked with yellow): GAGATTTCGAATCCACCTCAGATTTCGCTTGCTCCCCTCCCTCCCCCCGCGGCGTCCCCCCCGTCTCTCTCTCCGCGCTGGTGAGCCCCCGCGGGCGACGTGTGTCCCCTGTCCCGCGGGGGGTTTCCTCGCCTTCGACGGCCATCTGTTCGCCTCGCATGGCTCCCCTCCTGCCAAGCGTCCTCGCGTCGTCCCGGGAGCGCCTCCGCTCGCCAGGCGGCCGAGCGCCGCGGCGTCCAGCACAGATCCGCGCGCCGCCCAGCTAATCGCCGCGCCGCTTCCTCAGACTCCCATCTCTAATAGCTCACCCGCATCCCCCGTGCTCGGCGCGGCCTTCTCTTCCTTGCCTCCTCCTGTATGTAGTTTATAGCTTGTAGCTCCCTCACTCCCAAACTAGCAGCTCAGAATGGCTCTGCTCGCCTTTAATTTCGCATCTCTCGAGCCGCAGCGGCACGCCGTCGTCGTCTCAGATTAATGCAAGGGGTGGTGACAAGCTAGAGGCAGCAACTGCATATCTTGCAAGAAAATTGTAAGTAAATAACTTCGTAATTACTCTCAGTTATGTGTCAGAAAATGACTGAATATTATACAAGTACATAGAATCATTATTGTGCTGCATCTTACAGTTGTTTTAAGAAAAAGTTGGTGGGAGTTT | |||||||||
gi|169727779|gb|FE657239.1|FE657239 CBYZ13116.g1 CBYZ Panicum virgatum Kanlow 4 day old seedlings Panicum virgatum cDNA clone CB TGCAGTTGTTGTCTCAAGCTT EST sequence (targeted fragment marked with yellow): GGCTCCCTGCAAGAAGGCCACCCCCGGCGGCCACCCCGGCTGCGCGCAGCGCACGCATCGGGCCGGGAATCCACCTCAGATTTCGCTTGCTCCCCTCCCTCCCCCCGCGGCGTCCCCCCCGTCTCTCTCTCCGCGCTGGTGAGCCCCCGCGGGCGACGTGTGTCCCCTGTCCCGCGGGGGGTTTCCTCGCCTTCGACGGCCATCTGTTCGCCTCGCATGGCTCCCCTCCTGCCAAGCGTCCTCGCGTCGTCCCGGGAGCGCCTCCGCTCGCCAGGCGGCCGAGCGCCGCGGCGTCCAGCACAGATCCGCGCGCCGCCCAGCTAATCGCCGCGCCACTTCCTCAGACTCCCATCTCTAATAGCTCACCCGCATCCCCCGTGCTCGGCGCGGCCTTCTCTTCCTTGCCTCCTCCTGTATGTAGCTTATAGCTTGTAGCTCCCTCACTCCCAAACTAGCAGCTCAGAATGGCTCCGCTTGCCTTTAATTTCGCATCTCTCGAGCCGCAGCGGCACGCCGTCGTCGTCTCAGATTAATGCAAGGGGTGGTGACAAGCTAGAGGCAGCAGCTGCATATCCTGCAAGAAAATTCAGGCAGCGGCATCACTCGTCCCCTGGCGTCGCTTGCGGCAACCGCGGTGATCCTCCGCACTCTCCGAGCTCCTCGTGCTGGCGTGCGAGCTCTGGCGGCCACGGCCATCCTCTGCGCGCTCCGAGCTCCTCGCGCTGGCCTGCGAGTTCT | |||||||||
gi|198214689|gb|FL927914.1|FL927914 CCGP2990.g1 CCGP Panicum virgatum root (L) Panicum virgatum cDNA clone CCGP2990 3', mRNA seq TGCAGTTGTTGTCTCAAGCTT EST sequence (targeted fragment marked with yellow): AGACTTTCAGTTCTTCTTGGGATAGCTCATCTGACTTCAAGCTTGCACATGCCAAGGAAATAAGAGAGCTATCAACAAAAGTTGAGACAACAACTGGACAAGTTCACTTCGATAAATCTCGCCTGTCCAATGCCATTCCAACACTTAGCCATGGCAAAGATGAGCTGTTGCCAATGAAAGGTCCGGACACATCAACAACTGCTTCAAAATTCGATGGAGCACCGGATCTTCAGCGTGCTCTCTCTCTTCTGTCAGCTGGCTCTTGCGGATTCCCGAGTCCTGTACCGCAAGCATCTTGCCTTATCCAGTTCACTGGTGCCAGCGAGAACAGCGATGACCTTCATTTATCACATGGAGGGAACTCTGGTCCAGCTTCATGTGCTGATGAACAGCATATAGCACCTCAGCCTCAGCTGGTTCGTTTTACCATGGATACGAGTAGCAATGTCTATGAACCCACTTTCTTCGGTGTAAACCAGATAAATTAAGGTGTGAAAGACGCACAAAGATGGCATGGGGTCTTGCAAGTTCTTCAACTGCCAGAGATCAAGATCTCTGTTAATGCCATCCACATATTTATTGGCCATCCCTGAACTAAGTTGAACTGAGCGTAGGCCAGCTTGTGTTGAATATGCTGTTCCAACCTGTGATTGACCCATTTTTTCTGTTCCTTTTTGCCCCCCGTGATTTGACTACTTGGAACTTTTTAAGTGTGATATTGTAATTTTACACTTGTACAATCCTACTGTCAACATATTGAGATATCTTCGT | |||||||||
gi|198321159|gb|FL986605.1|FL986605 CCHY18969.b1 CCHY Panicum virgatum callus (N) Panicum virgatum cDNA clone CCHY18969 5', mRNA TGCAGTTGTTGTCTCAAGCTT EST sequence (targeted fragment marked with yellow): CTAAGAGGTAAAGATCGACCTGATGGCGATGGAGAATCTTCTCTTTGGCCACAATATTTCACGGATTTATGACCTTAAAGGTGCTACTTTTCTCGCGGCGTGTCTCTGATTCAAATGACCGTGACACTGTTTACCTGGACCAAAACTATGTTGAGGACATGGGTGTTTCTCCAATCTATATTGGTGGAAGAACAAAGCATCTTTTGCAGCGTGCAATCTGGAATGACACATCTTTCCTCACTTCGGTCAACGTCATGGACTATTCTCTGCTTGTGGGGAGTGGATAAACAAAAGCACGAACTTGTGTTTGGCATCATTGATTATCTGAGGCAATATACTTGGGACAACAACTGGAGACATGGGTGAAGAC | |||||||||
gi|304502208|gb|HO299036.1|HO299036 CFCA5549.g1 CFCA Panicum virgatum Sunburst normalized leaf Panicum virgatum cDNA clone CFCA5 TGCAGTTGTTGTCTCAAGCTT EST sequence (targeted fragment marked with yellow): GTGAGCTTCGGGTTCGGTGTGCCGGCCTCAACCGTTCGCACGGCGCCACTCCCAGGTGACCCATCAGCCGAGATATCTTTTCCACGGTTGGTGGGGTGCCCTGGGAGACAAAGGAGGCGAAGGCGTCAGTCGACTACCGCTAGGCTCCCGCGAGTACTTCCTCCCACACATCCGCTGGTGGGGTTTGCCCGTCAACAGATGCCCTTCGCACCTCTAGCGGAAGGTCCTGTCAAGCGAGGTTCACCCTTCAGGCAGGCCTTGGCAGAAGTATTTCTGTGGCAGCCTTCGGCGGAAGCGGGCCCTAAGAAGTGGCTTTCACTTCGTCCCTTGTTGTGGCGCTTACCAAGCCCCTGTGGTTTACTATGAGGCCCTTCTGAGGAAGTCTACCATCGTGCTTACGCGGCCCTGAAACGAGGGAGGCAAGGTTGGACTTTGCTGGGGGCTTTGTATATCCCTTATTGGGCCTTTGTGCCCTTCTTTTGGTTTGTTGTAACTTAGTTTCGTTCCCTTATGCAATGTTCCGTGTGTTGGCTTGAGGCAGCAACTGCAATTTCGGAATCTGCCTGCGTGCGGTGTATCAAAGGCTTCAGCTTGCGTTTGTAATACATGTGATTTTAATGAGACTTATTACCCC | |||||||||
gi|198201602|gb|FL916734.1|FL916734 CCGO10558.g1 CCGO Panicum virgatum root (H) Panicum virgatum cDNA clone CCGO10558 3', mRNA s TGCAGTTGTTGTCTCAAGCTT EST sequence (targeted fragment marked with yellow): AGAAGAGCAGCAGTGTCGCAAATCCCAACTCAGAGCTTAAGTTTTGGCAAAGGGAGGCAGCAAGCTTGAGACAACAACTGCACAACTTGCAAGAAAATCATAGGCAGTTGATGGGAGAGGATCTTTCTGGGCTTAATGTTAAGGAACTGCAGTCCCTAGAGAATCAGTTGGAAACAAGCCTGCGTGGAGTCCGCGCAAAGAAGGACCATCTCTTGATTGATGAAATTCACGAATTGAATCGGAAGGCTACTTTATTTCATCAAGAAAACATGGACTTGTACAATAAGATCAACCAGATTCGTCAAGAAAATTCCGAGTTATATAAGAAGATCTATCAGACCGAAGGACCAAGTGAAGTTAATCAGGAATCACCGACTCCATACAACTTTGCAGTAGTAGAAAACACAGATGTTCCTGTGCAACTTGGACTCAGCACACTGCCACAACAGAACAGCATCGAGCCGTCGACTGCTCCAAAGCTCGGATTGCAGTTAAATCCATGAAACAGAGTCAAATCACTATTCCTATTATGCTGTTGTAAAGAGATGATACTCAGCAAGACAAAACAATGTATTTATGGCAGAGAGATTTGAGATATGAATTTGTAAATGCACTGCAAATAAATTCCAGACTGGAATTGAGCTGTGGAATTCAGTGGATGATTGTTTTCTAGCTGCATATGATGTTAGATGTTCTCATATT | |||||||||
gi|198046190|gb|FL774407.1|FL774407 CCGF7031.b1 CCGF Panicum virgatum early floral buds + reproductive tissue (L) Panicum virgat TGCAGTTGTTGTCTCAAGCTT EST sequence (targeted fragment marked with yellow): CTGTTCATCCCCTCTTGTGCTCGTCCCGTGTTCATCCCCTCTCGTGCTCTGGACCTCGAGCCGCCGATCTGGGAGGGCCGGAGCGCCGCCCGCTCGCTGCGGCGCTGCAGGAGAGCTGCGCCTCCCGGCCGCCGTCCGCCGCAGATAGATGGCCACAAAACTCGATCAACCTTCTCCAGCCGAGCATCGGCGACCAAAATCCGCTGCACCACAATCTTTGACTCCCAAGATCTCGATATTCGGGACAAAAGCTGGATTCGTCATACCCAAGAACAAGCTAGCCGGCTCAATCGTAACCAGGGGCGCCACTTCCAAGAATGATACAGCAACTGCATCCAAGGAAGATAACAGCAGGCATGCTCAGAGAAAGACAAAGTGGGGGCCTGACCTCGCCGCCGACCCTGCCGTGTGCAAAGGAAGGGCTTTGGCCTACCAGGTGTCATTAATTAATATTAGTGCATGAGCAGACTCGAGTGGAGCAAATTACCAAGCAGCTGAAATCCGAAACTTTGGATATGGACGAAACTGAAGGTTCAATGTCCACTGGAAAAGGGTCAAATTCTGCTGGCACTGCAAATCTGAAAGACAATAAGCAGGAAAGGTTGCGCTATTGGAACTTGAAAGAAGCGAAATTATTGGGTGAAATACTCCGTCTGAATCCAGA | |||||||||
gi|198121393|gb|FL846237.1|FL846237 CCGH25111.g1 CCGH Panicum virgatum late flowering buds + seed development (L) Panicum virgat TGCAGTTGTTGTCTCAAGCTT EST sequence (targeted fragment marked with yellow): ATCGGCTACATCACTATATTAGAGAGTTGAGAACGATGAAGAAAAACATGGAGGCTGTAACAAAACAGAGCCGGACATTGGAAGAAGCGAAACTTGGAGGCATGGAGGAGATTCAAGGATACCAGAAAGAGATTGCAAGTTTGAAGCAACAAGTGCAAATGCTCAAGGATCAGTCCCAAAAGAAAACAGAGGAACTAAAAACCGCGGAAGCAAATTCTGTGGCTTTACAGAAACAATCTGAAGGTTTACTTATGGAGTATGACCGTCTAATTGCAGAAAATGGGGATTTGAGGAACCAGCTGCAGTCACCCTGACCTCCGCATGTCCCGCTCCGCCCGGAAGAAGAATTCGTAACAGAAATTCTGCAATTTTGAAGAGCCTGATGTACTGTAAATTTTGGGCCTATAGGGTTAACTGCACCCGATTTTGTATTGAGTATTCCAGTGTTTCATAATCACGTATGTAATTGAGTAGATGATGACATGTCTGTATGTGCGGATCATTATGCTGTATGGCCTTATTATAGATATGCTTATTATGCTTTCGACATTCTTCAGATACTAGTATTTGTGAAATAACATGTTTGACTTC | |||||||||
gi|198324378|gb|FL993599.1|FL993599 CCHY22595.b1 CCHY Panicum virgatum callus (N) Panicum virgatum cDNA clone CCHY22595 5', mRNA TGCAGTTGTTGTCTCAAGCTT EST sequence (targeted fragment marked with yellow): GGGGGGCGGCGGTCGCTTCCTCGCTCACTGACTTAGTAGCTTATAGCTTGTAGCTCCCTCACTCCCAAACTAGCAGCTCAGAATGGCTCCGCTTGCCTTTAATTTCGCATCTCTCGAGCCGCAGCGGCACGCCGTCGTCGTCTCAGATTAATGCAAGGGGTGGTGACAAGCTAGAGGCAGCAGCTGCATATCCTGCAAGAAAATTGGTTTTCAGACCATACCTATGATTTTCTTGCAAGTTGTGCAGTTGTTGTGTCAAGCTTGCTGCCTCCCTTTGCGAAAACTATCAAGAAAAGCACAGGTTATGTTATTGATGAACACATAGGTTAAAATTAAATGAATGAGCATGTGTCTGTAACAAGCAGGATGTTAATTTATGAAATCTTGTAGCATAAAGTAGCACTTCTCAGCATTATACTTATACCACAGATATTAGGTTCAAAACTTGGTTGTCCATTTTATAGCATGAAGTAGTATTTATTTTATTATTAAGGAAATGCAAAAACCGGTTCTCCATATTGGCAATGTGTGGCTATCTTAATGGTTTCTTTTAGCATTGGTCATCATGCAGTATGCTAAGGTGGCGCTTACTGAACTAGCAAACTATGTATTTCGGCTGACACTGTTGCCACTGTGCAGTGGCAAGCAAACTCTATGAAGAAACAAGGGTGCACCGTTGTCTGCCAGTGTTAATCCTTCTGTAGTTAATGTTCAG | |||||||||
gi|198324898|gb|FL991740.1|FL991740 CCHY21535.g1 CCHY Panicum virgatum callus (N) Panicum virgatum cDNA clone CCHY21535 3', mRNA TGCAGTTGTTGTCTCAAGCTT EST sequence (targeted fragment marked with yellow): GCCCGCAGCCGCCTCCCCCATACCGGGAGCGGAGCTAGGCGACGCAGCGGCACCTCATCTCTGGCGAAAGGGAAATGGCGACCGTTCCAGGGGATCTGATCTGGCAGATTGTGAGGAAGAACAACTCCTTCCTGGTGAAGCAGTTCGGCAATGGCAATGCCAAGGTGCAGTTCACCAAGGAGCCCAACAACCTCTACAACTTGCACTCCTACAAGCACTTTGGTTTGGCAAACAAGAAGACCGTGACAATCCAGCCGGCAGCTGGAAAGGACTCCGCTGTGGTCCTCTCGACGACCAAGACCAAGAAGCAGAACATGCCTGCGAAGATCAACCACAAGTCTGTCATGCGCAAGGAGTTCCGCAAGATGGCCAAGGCTGTGAAGAACCAGGTTAGGGACAACAACTACAGGCCTGGCCTGACCAAGCCGGCCCTCGCAAGGCTGAGCTCAGTGTACCGCAGCCTCCAGGTTGCCAAGTCTGGGGTCAAGAAGAAGAACAGGCAGCCGAAGCACTAAGCTTTGTGTTTTGTTGAGGGGCCTGTTGGTGCTCGTAGTCCCAGCTTATTATTTATGTTCCAACAGTTTTGAGACTTGAAGTGAGACTTGTTAGAACTAGAGCAACCATGTTAAAGCTGCTGCTGTGTCGTTCCAT | |||||||||