miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse




mature miRNA: TGCCAAAGGAGATTTGCCCGG
species: Panicum virgatum
database: miRNEST
The numbers on the right side of the alignments show a score calculated for them.
When calculating the score, a mismatch is given a score of 1, bulge: 2, and wobble: 0.5.

Predicted miRNA targets
gi|198337697|gb|GD003499.1|GD003499 CCHY28297.g1 CCHY Panicum virgatum callus (N) Panicum virgatum cDNA clone CCHY28297 3', mRNA

TGCCAAAGGAGATTTGCCCGG
||||||||||||| |.||| |
ACGGTTTCCTCTATATGGGAC

EST sequence (targeted fragment marked with yellow):
GATCGGCGAGCGTCAAGGTTCAGAACTTACAGGGAGAGGCTAGTAGGCATGTCAGCATGTGCTGAGCATGAATTACAGGGTATATCTCCTTTGGCACGGAGGCACGCAACCATCCGTAGGTATGTTAATGGATGGTGGCAAGCTGCTGGCTTGGAAGATGCAGCATAATAGCCGTGCGTGCCAAAGGAGAATTGCCCTGCGATTCACGGTTCTGTAATGTTTTTTTTGTGTGATCTGACAGTTGATCGAGCTGTGTGTATAGATCCAATTAAGCACCAATATCAGATATTGGCTATGCAATGCGAGTACATCTGATCAGACTCTGTTCACTTCAGACAATTGTCGTGATCAGCTAGACTACCTTGCAGGTGTCTCTCT



gi|304500991|gb|HO296253.1|HO296253 CFCA4038.g1 CFCA Panicum virgatum Sunburst normalized leaf Panicum virgatum cDNA clone CFCA4

TGCCAAAGGAGATTTGCCCGG
|.||||||.|||. |||| ||
ATGGTTTCTTCTGTACGGTCC

EST sequence (targeted fragment marked with yellow):
GGCTGTCTGGAAGTTCACGATGAAAGAAAAATCGATCACTTATATACACTTCACTCATGGTTGGGACCCACTTGCATCATCTTCTTCAGCTTGCAGTGGGCTACTGGATTTTGGACCTTTTGGTATCCTGGTGGATCAAGAAGTGGCCGCGCATCTCTCCTTCCCTGGCATGTCTTCTTTGGTATATTCATCTATGCTCTTGCTATAGCCACAAGTGTGAGTGGACTCCTAGAGAAGTCAATATTTATGCAGAGTGCCAAAATGATTGGGCGCTTCTCCACAGAAGTCATGTTTATGAACTCGCTGGGGATGCTGCTAGTGGTACTGGGCGCCCTTGTTATTCTTGCAATTGTTAGTCCTGGACCCGGTAAGATTGACACATACCGAGGCTCTTCAGAGTAAGCCGAAGTGGTTACAGTTCAGTTTCCCGCAATTTTAGCCAGTCACTGAGCATTGTATGTACATGTCGTTGAAGCCAGAATTGTGATTTCGGTCCTCTGATATGGATGGTCAGTGCTGAGGATAACCTTGTTCCTGTAACGAGGTTCACTTCATTCCAGTAGCATATTTGTGGATCAAGCTGACTGAAATTACATCCCAGATTTTTCTGTAGACCAAGACTCCCATATACGTTGGTTTTATACATTGGAATATGGGATATAATAAGTAGAGCTTTGTTTTGGATGAGCAGAGATTACATTTACCTCAGTTTAAATTAGAAGATCATGATTGCACCCTTGACG



gi|198004301|gb|FL748612.1|FL748612 CCGC3221.g1 CCGC Panicum virgatum early floral buds + reproductive tissue (H) Panicum virgat

TGCCAAAGGAGATTTGCCCGG
.||| ||||||||||||| |
GCGGGTTCCTCTAAACGGCAC

EST sequence (targeted fragment marked with yellow):
TTCCTTTCCGAAATAGTTTTCTCCAAGTCTACAAAAAGCACCACCGCAAATGAATAGAATGTTTTTTGTATCAATCTGGATATTGTCACCCCTTGGATGCCTTCTGGCCCCTTTCTCAGGAACACTAACAACCGTTCCTTCAAGCATTTTTAACAGTGCTTGTTGAACACCTTCACCTGAAACATCTCTGCTAAGATTGATGCTTTCAGCCTTCTTCGTTATTTTATCAACTTCATCAATGTAGACGATCCCTTGCTGAGCAGCAGCTACGTCAAAATCAGCAGCCGCTAGGAGCTTATACAAAATAGATTCAACATCCTCACCAACATATCCAGCCTGAGTGAGGGTTGTTGCATCAGCTATAACAAAGGGCACGTTCACAAATCTTGCTAGTGTTTTTGCCAGCAATGTTTTCCCCGAGCCCGTAGGACCCATGACAAGGATGTTGCTTTTCTCAAGCTCTACCATGTCAGTGTCGCTTGTGCAAGAATCACTCTCACTACAATCTCCAGCAGACCTGCTGGAGATTGATTCACAATATATCCTTTTATAGTGATTATAAACTGCTACAGACAACACCTTCTTGGCCCGCTGCTGGCCGATGACAAACTTATCGAGGCCACGGCAAATCTCCTTGGGCGTGGGGAACCGCCGGCCGAGGTTAGACCCACCCCACCCCGCGGTCTCCCCGGCCCCGTCCTTCCCGCCAGACCCGTCCCCGGCCCCGGGAACCGCAACCCTAACCACGTCGATCCTCCCCACGGCGCCC



gi|198122158|gb|FL847756.1|FL847756 CCGH26137.b1 CCGH Panicum virgatum late flowering buds + seed development (L) Panicum virgat

TGCCAAAGGAGATTTGCCCGG
.| |||||||| .|.||||||
GCAGTTTCCTCGGAGCGGGCC

EST sequence (targeted fragment marked with yellow):
GGTAGATCCACGAAGGGCGGTGCCATGGACGGCGACCCCCGGGCGAGGCTCCTTTGACGGCGACCCTAGCCTCTTTTTCTTCAACCTCGGCGGCGCGAGATCCGCTACCTCCTTTCCACCTCTACTTACGCGGCGTGAGATCCACAAAGGGCGCTGCCTTGGACGACAACGGTGACCCTTCCTGATGCAACAGCGCCCCGCGACGGATTTGACTCTAGATCTACCGGCCACTGGGATGAGGGGTGGCGCGGATCCGACGACGGAGCTCGTGGAGAG



gi|198084833|gb|FL811879.1|FL811879 CCGG12587.b1 CCGG Panicum virgatum late flowering buds + seed development (H) Panicum virgat

TGCCAAAGGAGATTTGCCCGG
|||||||||||||||||||.|
ACGGTTTCCTCTAAACGGGTC

EST sequence (targeted fragment marked with yellow):
CTGGGTTCGTGGATCGTGGGAGCAATCATGGCGGCGGGTGGGTACTGTCACAGGGTTCGCTGATCTTTGCAATCGGATCAGAAAGACCTCTCTATTTTCTGATGTCATCATAAGTGAAGCCCTCTCTGATGAAAAGCTGTTGTTTTGGTTGTTTTATTGGAATACTGGTTAACGGATGGTAGCATATTCTATTCTGTGTGATTAGGCTTGATTGCGGACTGATGCTCCCGATCGCTTACGTCCTCTGATCATCCAGAGTATACCAGCTGGCAGCTAGCATTTCTCTATTGGAATTATCACCCTTCATAAGAAATAGGGCAAATCTCCTTTGGCAAACATAGTTCAGAGGTCATCTCTTTGTCGGTTTATCCCGAGCTTGTTCCTATGATTGAATGAAATATCAGCAGCAAGATACTTCTAATGACCTCCCTTAGAACATCCTCATTTAGTTTGGTGGAAGTTTCAGAAGGTTCCATTCCTGGTCAGGTTTCCTCTGTCATGTGTATCAGCTGATTTGCTGGGCAAATCTCCTTTGGCATTACTTACTTACTGGTTCTTTTGGGCAAATCTCCTTTGGCATTGGCTGCTCCAGATCTCTCTGTGGGCAAATCTCCTTTGGCACTAGTTCTAGTTTTAGCTTTAGTTTCAGACTGCTCTTTGGGCAAATCTCCTTTGGCACAAAATACTACCTTCTTATATTTGCTTTATTTTGGGTAAATCTCCTCCAGCTGTGAGTAGCAGCAGCTCTATCAGGGTAATTCTCCTTTGGCATATAGTCAAGTGT



gi|198084833|gb|FL811879.1|FL811879 CCGG12587.b1 CCGG Panicum virgatum late flowering buds + seed development (H) Panicum virgat

TGCCAAAGGAGATTTGCCCGG
|||||||||||||||||||..
ACGGTTTCCTCTAAACGGGTT

EST sequence (targeted fragment marked with yellow):
CTGGGTTCGTGGATCGTGGGAGCAATCATGGCGGCGGGTGGGTACTGTCACAGGGTTCGCTGATCTTTGCAATCGGATCAGAAAGACCTCTCTATTTTCTGATGTCATCATAAGTGAAGCCCTCTCTGATGAAAAGCTGTTGTTTTGGTTGTTTTATTGGAATACTGGTTAACGGATGGTAGCATATTCTATTCTGTGTGATTAGGCTTGATTGCGGACTGATGCTCCCGATCGCTTACGTCCTCTGATCATCCAGAGTATACCAGCTGGCAGCTAGCATTTCTCTATTGGAATTATCACCCTTCATAAGAAATAGGGCAAATCTCCTTTGGCAAACATAGTTCAGAGGTCATCTCTTTGTCGGTTTATCCCGAGCTTGTTCCTATGATTGAATGAAATATCAGCAGCAAGATACTTCTAATGACCTCCCTTAGAACATCCTCATTTAGTTTGGTGGAAGTTTCAGAAGGTTCCATTCCTGGTCAGGTTTCCTCTGTCATGTGTATCAGCTGATTTGCTGGGCAAATCTCCTTTGGCATTACTTACTTACTGGTTCTTTTGGGCAAATCTCCTTTGGCATTGGCTGCTCCAGATCTCTCTGTGGGCAAATCTCCTTTGGCACTAGTTCTAGTTTTAGCTTTAGTTTCAGACTGCTCTTTGGGCAAATCTCCTTTGGCACAAAATACTACCTTCTTATATTTGCTTTATTTTGGGTAAATCTCCTCCAGCTGTGAGTAGCAGCAGCTCTATCAGGGTAATTCTCCTTTGGCATATAGTCAAGTGT



gi|198084833|gb|FL811879.1|FL811879 CCGG12587.b1 CCGG Panicum virgatum late flowering buds + seed development (H) Panicum virgat

TGCCAAAGGAGATTTGCCCGG
|||||||||||| ||.||| |
ACGGTTTCCTCTTAATGGGAC

EST sequence (targeted fragment marked with yellow):
CTGGGTTCGTGGATCGTGGGAGCAATCATGGCGGCGGGTGGGTACTGTCACAGGGTTCGCTGATCTTTGCAATCGGATCAGAAAGACCTCTCTATTTTCTGATGTCATCATAAGTGAAGCCCTCTCTGATGAAAAGCTGTTGTTTTGGTTGTTTTATTGGAATACTGGTTAACGGATGGTAGCATATTCTATTCTGTGTGATTAGGCTTGATTGCGGACTGATGCTCCCGATCGCTTACGTCCTCTGATCATCCAGAGTATACCAGCTGGCAGCTAGCATTTCTCTATTGGAATTATCACCCTTCATAAGAAATAGGGCAAATCTCCTTTGGCAAACATAGTTCAGAGGTCATCTCTTTGTCGGTTTATCCCGAGCTTGTTCCTATGATTGAATGAAATATCAGCAGCAAGATACTTCTAATGACCTCCCTTAGAACATCCTCATTTAGTTTGGTGGAAGTTTCAGAAGGTTCCATTCCTGGTCAGGTTTCCTCTGTCATGTGTATCAGCTGATTTGCTGGGCAAATCTCCTTTGGCATTACTTACTTACTGGTTCTTTTGGGCAAATCTCCTTTGGCATTGGCTGCTCCAGATCTCTCTGTGGGCAAATCTCCTTTGGCACTAGTTCTAGTTTTAGCTTTAGTTTCAGACTGCTCTTTGGGCAAATCTCCTTTGGCACAAAATACTACCTTCTTATATTTGCTTTATTTTGGGTAAATCTCCTCCAGCTGTGAGTAGCAGCAGCTCTATCAGGGTAATTCTCCTTTGGCATATAGTCAAGTGT



gi|197963082|gb|FL702708.1|FL702708 CCGA7955.b1 CCGA Panicum virgatum apex + stem (H) Panicum virgatum cDNA clone CCGA7955 5', m

TGCCAAAGGAGATTTGCCCGG
|||||||||||||| ||||..
ACGGTTTCCTCTAA-CGGGTT

EST sequence (targeted fragment marked with yellow):
GGGATGGATTGAGGCGCGGGGGAAGAGGAGGGTAGCTTCCTCTTCTTCGGTGATCGGCTCTGGTTCGTGGATCGTGAGAGCAGAGCAATCATGGCGGCGGGTGGGTACTGACTCACAGGGTGTGCTGATCTTTGCAATCGGATCAGAAAGACCACTCTATTCTCTGATGTCATCATAAGTGAAGCCCTCTCTGATGAAAAGCTGTTATCTTGGAGTACTGGTTAACGGATGGTAGCATATTCTCTTCTGTGTGATTAGGCTTGATTGTGGATTGATGCTCCCGATCACTTACGTCCTCTGATCATCCAGAAGATACCATCTGGCAGCTAGCATTTCTCTATTGGAATTATCACCCTTCATAAGAAATAGGGAAAATCTCCTTTGGCAAACATAGATCAGAGTTCATCTCTTTGTCGGTTTATCCGAGCTTGTTCCTATGATTGAATGAAATATCAGCAGCAAGATACTTCTAAATGATCTCCCTTAGAAAATCCTCATTTATTTTGGTGGAAGTTTCAGAAGGTTTTGTTCCTGGTCAGGTTTCCTCTGTCATGTGTATCAGCTGATTTGCTGGGCAAATCTCCTTTGGCATTATTTACTTACTGGTTCTTTTGGGCAAATCTCCTTTGGCATTGGCTGCTCCAGATCTCTCTGTGGGCAAATCTCCTTTGGCACTAGTTCTAGTTTTAGCTTTAGTTTCGGACTGCTCTTTGGGCAATCTCCTTTGGCACAAGTACTACCTCTCTATCTACTATTTTGGGTAATCTCCTCCAGCTGTGAGTAGCAGCAG



gi|197963082|gb|FL702708.1|FL702708 CCGA7955.b1 CCGA Panicum virgatum apex + stem (H) Panicum virgatum cDNA clone CCGA7955 5', m

TGCCAAAGGAGATTTGCCCGG
||||||||||||||| ||| .
ACGGTTTCCTCTAAAAGGGAT

EST sequence (targeted fragment marked with yellow):
GGGATGGATTGAGGCGCGGGGGAAGAGGAGGGTAGCTTCCTCTTCTTCGGTGATCGGCTCTGGTTCGTGGATCGTGAGAGCAGAGCAATCATGGCGGCGGGTGGGTACTGACTCACAGGGTGTGCTGATCTTTGCAATCGGATCAGAAAGACCACTCTATTCTCTGATGTCATCATAAGTGAAGCCCTCTCTGATGAAAAGCTGTTATCTTGGAGTACTGGTTAACGGATGGTAGCATATTCTCTTCTGTGTGATTAGGCTTGATTGTGGATTGATGCTCCCGATCACTTACGTCCTCTGATCATCCAGAAGATACCATCTGGCAGCTAGCATTTCTCTATTGGAATTATCACCCTTCATAAGAAATAGGGAAAATCTCCTTTGGCAAACATAGATCAGAGTTCATCTCTTTGTCGGTTTATCCGAGCTTGTTCCTATGATTGAATGAAATATCAGCAGCAAGATACTTCTAAATGATCTCCCTTAGAAAATCCTCATTTATTTTGGTGGAAGTTTCAGAAGGTTTTGTTCCTGGTCAGGTTTCCTCTGTCATGTGTATCAGCTGATTTGCTGGGCAAATCTCCTTTGGCATTATTTACTTACTGGTTCTTTTGGGCAAATCTCCTTTGGCATTGGCTGCTCCAGATCTCTCTGTGGGCAAATCTCCTTTGGCACTAGTTCTAGTTTTAGCTTTAGTTTCGGACTGCTCTTTGGGCAATCTCCTTTGGCACAAGTACTACCTCTCTATCTACTATTTTGGGTAATCTCCTCCAGCTGTGAGTAGCAGCAG



gi|198084833|gb|FL811879.1|FL811879 CCGG12587.b1 CCGG Panicum virgatum late flowering buds + seed development (H) Panicum virgat

TGCCAAAGGAGATTTGCCCGG
|||||||||||||||||||.
ACGGTTTCCTCTAAACGGGTG

EST sequence (targeted fragment marked with yellow):
CTGGGTTCGTGGATCGTGGGAGCAATCATGGCGGCGGGTGGGTACTGTCACAGGGTTCGCTGATCTTTGCAATCGGATCAGAAAGACCTCTCTATTTTCTGATGTCATCATAAGTGAAGCCCTCTCTGATGAAAAGCTGTTGTTTTGGTTGTTTTATTGGAATACTGGTTAACGGATGGTAGCATATTCTATTCTGTGTGATTAGGCTTGATTGCGGACTGATGCTCCCGATCGCTTACGTCCTCTGATCATCCAGAGTATACCAGCTGGCAGCTAGCATTTCTCTATTGGAATTATCACCCTTCATAAGAAATAGGGCAAATCTCCTTTGGCAAACATAGTTCAGAGGTCATCTCTTTGTCGGTTTATCCCGAGCTTGTTCCTATGATTGAATGAAATATCAGCAGCAAGATACTTCTAATGACCTCCCTTAGAACATCCTCATTTAGTTTGGTGGAAGTTTCAGAAGGTTCCATTCCTGGTCAGGTTTCCTCTGTCATGTGTATCAGCTGATTTGCTGGGCAAATCTCCTTTGGCATTACTTACTTACTGGTTCTTTTGGGCAAATCTCCTTTGGCATTGGCTGCTCCAGATCTCTCTGTGGGCAAATCTCCTTTGGCACTAGTTCTAGTTTTAGCTTTAGTTTCAGACTGCTCTTTGGGCAAATCTCCTTTGGCACAAAATACTACCTTCTTATATTTGCTTTATTTTGGGTAAATCTCCTCCAGCTGTGAGTAGCAGCAGCTCTATCAGGGTAATTCTCCTTTGGCATATAGTCAAGTGT



gi|197947339|gb|FL689938.1|FL689938 CCGA1300.b1 CCGA Panicum virgatum apex + stem (H) Panicum virgatum cDNA clone CCGA1300 5', m

TGCCAAAGGAGATTTGCCCGG
.|||||||||||||| ||.|
TTGGTTTCCTCTAAACCGGTC

EST sequence (targeted fragment marked with yellow):
CCCGTCGTCGTCGCCATCGCCGTCCCCGTCCTGCGACCCGCTGTTGCCGCCGCCCGCCCATCCTGCGACCCGCCGCTGCCGCCCGCCAGTCAGATCCGATGACAGGTGCCGCCCGCCGCCAGGCCAGCACTGCGCATCCTCGCATTCAAGGCGACCTAGCTTCAGATCGGGATGTGGGTGGTGGTTCCTTCGATTTGGTCACCAGGATGGAGTGCTCCTTCTTTCGACCCGCTACCTCCTGCGGGATGGGGTAAGGACGCAACGACGACGGCGACCTGCAGGAGCTCAACTTCCTCACCGTCTCCTCAAGCTTGCATTTCTTCAGAGGTTTTATCCCCTGTGTGCAAAGTGCCCTCTCATCACCTCCACCCTATTCCCATGGTTTTGCTTTATTTCACACGTATGTGATGATTATTTGTGTCGTTAGTAGCTGTTAGTAATCCCCGTGAGCCAAAGGGGACATGCATATCTTCTTGATTCGTCATCTACCTTGTGGCGATGAGTTGCCATTTTGGATCTGGCCAAATCTCCTTTGGTTGCCCATTCAATCAAGGCTCCGTAGCTTCTTCTCCACATAGTGAACTTTGTGAATTTTGGATTCCTCATATAATTTTGTTTTTAAATGTTGATGTGCCCAATCTGAACTACTGATCATTTGAGTTTATTCATGAGATATCCTGCTGCCTACGCACATCCCTTACCAACGAGCTAGGGGCAATGAGCGTCCCCAGCCTTAACTGCCTCCATCTGAATACAGCCTGTAGAACACCCTCCATCGAGCAGCTGATCA



gi|197963082|gb|FL702708.1|FL702708 CCGA7955.b1 CCGA Panicum virgatum apex + stem (H) Panicum virgatum cDNA clone CCGA7955 5', m

TGCCAAAGGAGATTTGCCCGG
|||||||||||||||||||.
ACGGTTTCCTCTAAACGGGTG

EST sequence (targeted fragment marked with yellow):
GGGATGGATTGAGGCGCGGGGGAAGAGGAGGGTAGCTTCCTCTTCTTCGGTGATCGGCTCTGGTTCGTGGATCGTGAGAGCAGAGCAATCATGGCGGCGGGTGGGTACTGACTCACAGGGTGTGCTGATCTTTGCAATCGGATCAGAAAGACCACTCTATTCTCTGATGTCATCATAAGTGAAGCCCTCTCTGATGAAAAGCTGTTATCTTGGAGTACTGGTTAACGGATGGTAGCATATTCTCTTCTGTGTGATTAGGCTTGATTGTGGATTGATGCTCCCGATCACTTACGTCCTCTGATCATCCAGAAGATACCATCTGGCAGCTAGCATTTCTCTATTGGAATTATCACCCTTCATAAGAAATAGGGAAAATCTCCTTTGGCAAACATAGATCAGAGTTCATCTCTTTGTCGGTTTATCCGAGCTTGTTCCTATGATTGAATGAAATATCAGCAGCAAGATACTTCTAAATGATCTCCCTTAGAAAATCCTCATTTATTTTGGTGGAAGTTTCAGAAGGTTTTGTTCCTGGTCAGGTTTCCTCTGTCATGTGTATCAGCTGATTTGCTGGGCAAATCTCCTTTGGCATTATTTACTTACTGGTTCTTTTGGGCAAATCTCCTTTGGCATTGGCTGCTCCAGATCTCTCTGTGGGCAAATCTCCTTTGGCACTAGTTCTAGTTTTAGCTTTAGTTTCGGACTGCTCTTTGGGCAATCTCCTTTGGCACAAGTACTACCTCTCTATCTACTATTTTGGGTAATCTCCTCCAGCTGTGAGTAGCAGCAG



gi|198084833|gb|FL811879.1|FL811879 CCGG12587.b1 CCGG Panicum virgatum late flowering buds + seed development (H) Panicum virgat

TGCCAAAGGAGATTTGCCCGG
||||||||||||||||||| .
ACGGTTTCCTCTAAACGGGAT

EST sequence (targeted fragment marked with yellow):
CTGGGTTCGTGGATCGTGGGAGCAATCATGGCGGCGGGTGGGTACTGTCACAGGGTTCGCTGATCTTTGCAATCGGATCAGAAAGACCTCTCTATTTTCTGATGTCATCATAAGTGAAGCCCTCTCTGATGAAAAGCTGTTGTTTTGGTTGTTTTATTGGAATACTGGTTAACGGATGGTAGCATATTCTATTCTGTGTGATTAGGCTTGATTGCGGACTGATGCTCCCGATCGCTTACGTCCTCTGATCATCCAGAGTATACCAGCTGGCAGCTAGCATTTCTCTATTGGAATTATCACCCTTCATAAGAAATAGGGCAAATCTCCTTTGGCAAACATAGTTCAGAGGTCATCTCTTTGTCGGTTTATCCCGAGCTTGTTCCTATGATTGAATGAAATATCAGCAGCAAGATACTTCTAATGACCTCCCTTAGAACATCCTCATTTAGTTTGGTGGAAGTTTCAGAAGGTTCCATTCCTGGTCAGGTTTCCTCTGTCATGTGTATCAGCTGATTTGCTGGGCAAATCTCCTTTGGCATTACTTACTTACTGGTTCTTTTGGGCAAATCTCCTTTGGCATTGGCTGCTCCAGATCTCTCTGTGGGCAAATCTCCTTTGGCACTAGTTCTAGTTTTAGCTTTAGTTTCAGACTGCTCTTTGGGCAAATCTCCTTTGGCACAAAATACTACCTTCTTATATTTGCTTTATTTTGGGTAAATCTCCTCCAGCTGTGAGTAGCAGCAGCTCTATCAGGGTAATTCTCCTTTGGCATATAGTCAAGTGT



gi|197963082|gb|FL702708.1|FL702708 CCGA7955.b1 CCGA Panicum virgatum apex + stem (H) Panicum virgatum cDNA clone CCGA7955 5', m

TGCCAAAGGAGATTTGCCCGG
|||||||||||||||||||.|
ACGGTTTCCTCTAAACGGGTC

EST sequence (targeted fragment marked with yellow):
GGGATGGATTGAGGCGCGGGGGAAGAGGAGGGTAGCTTCCTCTTCTTCGGTGATCGGCTCTGGTTCGTGGATCGTGAGAGCAGAGCAATCATGGCGGCGGGTGGGTACTGACTCACAGGGTGTGCTGATCTTTGCAATCGGATCAGAAAGACCACTCTATTCTCTGATGTCATCATAAGTGAAGCCCTCTCTGATGAAAAGCTGTTATCTTGGAGTACTGGTTAACGGATGGTAGCATATTCTCTTCTGTGTGATTAGGCTTGATTGTGGATTGATGCTCCCGATCACTTACGTCCTCTGATCATCCAGAAGATACCATCTGGCAGCTAGCATTTCTCTATTGGAATTATCACCCTTCATAAGAAATAGGGAAAATCTCCTTTGGCAAACATAGATCAGAGTTCATCTCTTTGTCGGTTTATCCGAGCTTGTTCCTATGATTGAATGAAATATCAGCAGCAAGATACTTCTAAATGATCTCCCTTAGAAAATCCTCATTTATTTTGGTGGAAGTTTCAGAAGGTTTTGTTCCTGGTCAGGTTTCCTCTGTCATGTGTATCAGCTGATTTGCTGGGCAAATCTCCTTTGGCATTATTTACTTACTGGTTCTTTTGGGCAAATCTCCTTTGGCATTGGCTGCTCCAGATCTCTCTGTGGGCAAATCTCCTTTGGCACTAGTTCTAGTTTTAGCTTTAGTTTCGGACTGCTCTTTGGGCAATCTCCTTTGGCACAAGTACTACCTCTCTATCTACTATTTTGGGTAATCTCCTCCAGCTGTGAGTAGCAGCAG



gi|197963082|gb|FL702708.1|FL702708 CCGA7955.b1 CCGA Panicum virgatum apex + stem (H) Panicum virgatum cDNA clone CCGA7955 5', m

TGCCAAAGGAGATTTGCCCGG
|||||||||||||||||||..
ACGGTTTCCTCTAAACGGGTT

EST sequence (targeted fragment marked with yellow):
GGGATGGATTGAGGCGCGGGGGAAGAGGAGGGTAGCTTCCTCTTCTTCGGTGATCGGCTCTGGTTCGTGGATCGTGAGAGCAGAGCAATCATGGCGGCGGGTGGGTACTGACTCACAGGGTGTGCTGATCTTTGCAATCGGATCAGAAAGACCACTCTATTCTCTGATGTCATCATAAGTGAAGCCCTCTCTGATGAAAAGCTGTTATCTTGGAGTACTGGTTAACGGATGGTAGCATATTCTCTTCTGTGTGATTAGGCTTGATTGTGGATTGATGCTCCCGATCACTTACGTCCTCTGATCATCCAGAAGATACCATCTGGCAGCTAGCATTTCTCTATTGGAATTATCACCCTTCATAAGAAATAGGGAAAATCTCCTTTGGCAAACATAGATCAGAGTTCATCTCTTTGTCGGTTTATCCGAGCTTGTTCCTATGATTGAATGAAATATCAGCAGCAAGATACTTCTAAATGATCTCCCTTAGAAAATCCTCATTTATTTTGGTGGAAGTTTCAGAAGGTTTTGTTCCTGGTCAGGTTTCCTCTGTCATGTGTATCAGCTGATTTGCTGGGCAAATCTCCTTTGGCATTATTTACTTACTGGTTCTTTTGGGCAAATCTCCTTTGGCATTGGCTGCTCCAGATCTCTCTGTGGGCAAATCTCCTTTGGCACTAGTTCTAGTTTTAGCTTTAGTTTCGGACTGCTCTTTGGGCAATCTCCTTTGGCACAAGTACTACCTCTCTATCTACTATTTTGGGTAATCTCCTCCAGCTGTGAGTAGCAGCAG



gi|198372991|gb|GD039900.1|GD039900 CCHZ20810.b1 CCHZ Panicum virgatum abiotic and biotic stress treatments (N) Panicum virgatum

TGCCAAAGGAGATTTGCCCGG
|.||||||.|||. |||| ||
ATGGTTTCTTCTGTACGGTCC

EST sequence (targeted fragment marked with yellow):
CATCTCTCCTTCCCTGGCATGTCTTCTTTGGTATATTCATCTATGCTCTTGCTATCGCCACAAGTGTGAGTGGACTCCTAGAGAAGTCAATATTTATGCAGAGTGCCAAAATGATTGGGCGCTTCTCCACAGAAGCCATGTTTATGAACTCGCTGGGGATGCTGCTAGTGGTACTGGGCGCCCTTGTTATTCTTGCAATTGTCAGCCCTGGACCTGGTAAGATTGACACATACCGAGGCTCTTCAGAGTAAGCCGAAGTGGTTACAGTTCAGTTTCCTGCAATTTTAGCCAGTCACTGAGCATTGTATGTACATGTCGTTGAAGTCAGAATTGTGATTTCGGTCCTCTGATATGGATAGTCAGTGCTGAGGATAACCTCGTTCCTGTAACGAGGTTCACTTCATTCCAGTAGCATATTTGTGGATCAAGCTGACTGAAATTACATCCCAGATTTTTCTGTAGACCAAGACTCCCATATACTTTGGTTTTATACATTGGAATATGGGATATAATAAGTAGAGCTTTGTTTTGGATGAGCAGAGATTACATTTACCTCAGTTTAAATTAGAAGATCATGATTGCACCCTTGACGAG