| mature miRNA: CCCGCCTTGCATCAACTGAAT species: Phaseolus vulgaris database: miRNEST The numbers on the right side of the alignments show a score calculated for them. When calculating the score, a mismatch is given a score of 1, bulge: 2, and wobble: 0.5. |
| Predicted miRNA targets | |||||||||
gi|312056606|gb|GW884614.1|GW884614 PVUSE1NG-RP-008_B09_30MAR2009_047 PVUSE1NG Phaseolus vulgaris cDNA, mRNA sequence CCCGCCTTGCATCAACTGAAT EST sequence (targeted fragment marked with yellow): GGTGGCAGTATTCTGTGGCGGTAACATGCCTGTGAATCCACTGCTGGCCCTGTTTGAAAACTTTGAGCAAGTCTCAAATTTTGTTCAACATCATCTCTCTAATTTCATAGGTCCTCATCTTCAGTCATCAGGGCTCCCTGGTAGTGGCTCTCTCTTGTCTATCTCTTCCTCCACCAAAGCTCCACTTGCAAAAACTACATCTTCTGTACAACTTGGCGATACTGCTGTCAAGGGAAAGTCTACAACCCCAGTGCCTAAAGAAGAGCTTGGAAGGGCTACTTGGACTTTACTTCACACTCTAGCAGCTCAGTATCCAGATAACCCTACAAGACAGCAGAAGAAGGATGTAAAAGAACTGGTACAAATATTATCTCGAATGTATCCATGCAGGGAATGTGCAGATCATTTTAAAGATATTCTTAGAGCAAATCCTGTACAGGCTGGGTCACATGCTGAATTTTCTCAGTGGTTGTGTCATGTTCACAATGTTGTTAATAGAAGTCTTGACAAACCAGTATTCCCCTGTGAACGAGTTGATGCAAGGTGGGGGAAACTAGAATGCGAACAGAGAGCCTGTGAAATTATTGGAAGCACATCACTTTTTGGGAAGATATAATAGGAATCTATTTAAAATGATAGCTTACATATATGCGGTATGTACTAAATTTGGACTTCTGGAAACATGTTTCTCAATGAATATTTTTTATGCGGTACTTATAGCCCGTTTTTTCATAACTCTAGTCTGATTTGTTCATATTTAAAGAGTATTTTTCATAACTCAGCTGAATTTACTTC | |||||||||
gi|62716304|gb|CV542900.1|CV542900 RTS_127_F09 Phaseolus vulgaris P- root EST library Phaseolus vulgaris cDNA 5', mRNA sequence CCCGCCTTGCATCAACTGAAT EST sequence (targeted fragment marked with yellow): GGTTCTATATTACACACCTCAAATCCTCGAAGAGGCTGGTGTTGAAATTCTTCTTTCAGATATAGGCATTGGCTCAGAGTCTGCATCATTCCTTATCAGTGCTCTCACAACCTTATTGATGCTTCCTTGTATAGCCTTAGCCATGAAGCTCATGGATGTTTCAGGCAGAAGGCAATTGCTACTTACTACAATTCCCGTGCTGATAGTGTCACTGATTATTTTGGTCATTGGAAGCCTAGTAAATTTTGGCAATGTGGTCCATGCGGCAATCTCAACTACATGCGTTGTGGTTTATTTCTGCTGCTTTGTGATGGGTTACGGACCAATTCCAAACATTCTTTGCTCAGAGATTTTCCCCACTAGAGTGCGTGGCCTCTGCATTGCTATATGTGCGTTAGTATTCTGGATTGGAGACATCATTATCACATACTCGCTACCTGTGATGCTCAGCTCTTTAGGACTTGGTGGTGTCTTCGCCATTTATGCTGTGGTTTGTTTCATCTCCTGGATATTTGTGTTTTTGAAGGTTCCAGAAACAAAGGGCATGCCCCTTGAAGTCATCTCTGAATTCTTTTCTGTTGGTGCAAGGCAGGCTGCTACGGCTAAGAATGAGTAGCATCACCCGATGTATGCAATGTAACTTAGTCTCTAAAACCCACCCTATCTCGTCTTTATAAATTTTGCTTGCTGTGAGTAT | |||||||||
gi|312036396|gb|GW889312.1|GW889312 PVUSE1NG-RP-025_N20_22MAY2009_068 PVUSE1NG Phaseolus vulgaris cDNA, mRNA sequence CCCGCCTTGCATCAACTGAAT EST sequence (targeted fragment marked with yellow): GGAACAACGTTGTTGTGGCAGTATTCTGCGGCGGTAACATGCCTGTGAATCCACTGCTGGCCCTGTTTGAAAACTTTGAGCAAGTCTCAAATTTTGTTCAACATCATCTCTCTAATTTCATAGGTCCTCATCTTCAGTCATCAGGGCTCCCTGGTAGTGGCTCTCTCTTGTCTATCTCTTCCTCCACCAAAGCTCCACTTGCAAAAACTACATCTTCTGTACAACTTGGCGATACTGCTGTCAAGGGAAAGTCTACAACCCCAGTGCCTAAAGAAGAGCTTGGAAGGGCTACTTGGACTTTACTTCACACTCTAGCAGCTCAGTATCCAGATAACCCTACAAGACAGCAGAAGAAGGATGTAAAAGAACTGGTACAAATATTATCTCGAATGTATCCATGCAGGGAATGTGCAGATCATTTTAAAGATATTCTTAGAGCAAATCCTGTACAGGCTGGGTCACATGCTGAATTTTCTCAGTGGTTGTGTCATGTTCACAATGTTGTTAATAGAAGCCTTGACAAACCAGTATTCCCCTGTGAACGAGTTGATGCAAGGTGGGGGAAACTAGAATGCGAACAGAGAGCCTGTGAAATTATTGGAAGCACATCACTTTTTGGGAAGATATAATAGGAATCTATTTAAAATGATAGCTTACATATATGAGGTATGTACTAAATTTGGACTTCTGGAAACATGTTCTCAATGAATATTTTTTATGCGGTACTTATAGCCCGTTTTTTCATAACTCTAGTCTGATTTGTTCATATTTA | |||||||||