| mature miRNA: TATATTGCAGATTCTTCATTA species: Phaseolus vulgaris database: miRNEST The numbers on the right side of the alignments show a score calculated for them. When calculating the score, a mismatch is given a score of 1, bulge: 2, and wobble: 0.5. |
| Predicted miRNA targets | |||||||||
gi|312043518|gb|GW904154.1|GW904154 PVUSE3NG-RP-013_D05_2APR2009_029 PVUSE3NG Phaseolus vulgaris cDNA, mRNA sequence TATATTGCAGATTCTTCATTA EST sequence (targeted fragment marked with yellow): GACACCACAAAACTCATAATAAGGAATCTGCAAAATCAAAGAATGGGTTATGTTAGGGTTGCTCCTTTGGCTCTCTTCTTGCTTGCCACTTCCATAATGTTTTGGATGAAGAAGACAGAGGCAGTAGTATGTTCAGGTGTTTGTTCACCGTTTGAGATGCCACCATGCGGGTCAAGTGATTGTCGCTGTATCCCTTATGGACTATTTATTGGTGCCTGCACTTATCCAAGGGGACTTTCATCTGTGGCAAAGACGATAGATGAACATCCCAACTTATGTCAATCTCATGGAGAATGCATGAAGAAAGGAAGTGGGAACTTTTGTGCTCGTTATCCTAATGATTATGTGGATTATGGTTGGTGCTTTAACTCTGATTCTGATGAACTTAAAGGGTTCTTGGCCATGCCTAGAGAAATATCCAAGTAGTGTGAATGGCTGTGAAGAGTGGTGATGCATGATGCATATGATGCATCTACTCCTACTTCTAGAAATGAAAGCTTATGATGCATCTATTGCTATGAATAAAAAAGAGTGTTCCATGTAACTCATAGTTGGTTACTGTACGCTCCTGCCACATGAGTTAATAAACAAAAAGTTCTCA | |||||||||
gi|312059904|gb|GW913026.1|GW913026 PVUSE4NG_RP_1004_C09_23JULY2008_045 PVUSE4NG Phaseolus vulgaris cDNA, mRNA sequence TATATTGCAGATTCTTCATTA EST sequence (targeted fragment marked with yellow): GAGCCAAAAGCGCTTCGGAGGCTCAGATAGTCACCACAGAAGCCGACGCCGCCACTGCGCTTGAACAGAAGTGGCTTCATCTGGCTGACTCTTTCTCCTCTCCGTAACTGCAAACACCATCAGCTATCCACATCATTAATATTAAGTCACCTTTGGAATACCACCTTCAATTCTTATCTGTAAGATATATTATGTATTATATGTGGTGATTAAAGATCTGTAATATATATTATGTATTATATGTGGTGATTAAAGTAATTGGTCGCATTCATCCTAACAATTTCCCG | |||||||||
gi|312052016|gb|GW906274.1|GW906274 PVUSE3NG-T3-011_L03_01APR2009_006 PVUSE3NG Phaseolus vulgaris cDNA, mRNA sequence TATATTGCAGATTCTTCATTA EST sequence (targeted fragment marked with yellow): AAAAGCGCTTCGGAGGCTCAGATAGTCACCACAGAAGCCGACGCCGCCACTGCGCTTGAACAGAAGTGGCTTCATCTGGCTGACTCTTTCTCCTCTCCGTAACTGCAAACACCATCAGCTATCCACATCATTAATATTAAGTCACCTTTGGAATACCACCTTCAATTCTTATCTGTAAGATATATTATGTATTATATGTGGTGATTAAAGATCTGTAATATATATTATGTATTATATGTGG | |||||||||
gi|312041921|gb|GW910803.1|GW910803 PVUSE4NG-RP-015_I05_2APR2009_023 PVUSE4NG Phaseolus vulgaris cDNA, mRNA sequence TATATTGCAGATTCTTCATTA EST sequence (targeted fragment marked with yellow): AAATAGAGATAAATGATCAAGGTCCGTCCCATCTCTGAAAATGCTCTATGAGGTGTTGGGAAATGGTTGAAGTAGTTGAATAGGAGGATCGCTATGACTATAGCTCTTGGTAAATTTACCAAAGATGAAAAGGATTTATTTGATATTATGGATGACTGGTTGCGGAGGGACCGTTTCGTTTTTGTGGGTTGGTCCGGTCTATTACTCTTTCCGTGCGCCTATTTCGCCTTGGGGGGTTGGTTTACAGGTACGACCTTTGTAACTTCATGGTATACTCACGGCTTGGCAAGTTCTTATTTAGAAGGCTGCAACTTCTTAACCGCTGCAGTTTCCACTCCCGCTAATAGTTTATCACACTCTTTGTTGTTACTGTGGGGTCCTGAGGCACAGGGAGATTTTACCCGTTGGTGTCAGTTAGGTGGTCTGTGGACTTTTGTTGCTCTCCATGGTGCTTTCGGATTAATAGGTTTCATGTTACGTCAATTTGAACTTGCTCGATCTGTTCAATTACGACCTTATAATGCGATCGCATTCTCAGGTCCAATTGCTGTTTTTGTTTCTGTATTCCTTATTTATCCACTGGCTTCATCTGGCTGACTCTTTCTCCTCTCCGTAACTGCAAACACCATCAGCTATCCACATCATTAATATTAAGTCACCTTTGGAATACCACCTTCAATTCTTATCTGTAAGATATATTATGTATTATATGTGGTGATTAAAGATCTGTAATATATATTATGTATTATATGTGGTGATTAAAG | |||||||||
gi|312053345|gb|GW901775.1|GW901775 PVUSE2NG_RP_1003_J14_23JULY2008_055 PVUSE2NG Phaseolus vulgaris cDNA, mRNA sequence TATATTGCAGATTCTTCATTA EST sequence (targeted fragment marked with yellow): TCCTCTGGGTTGTGATTCTCAAGATAGATAGATAGATATAGAGAGAGAAATGGCTTTCAGTATTTCCATATCTCAATCAGGTTTCCCAGAGAGAGAAAAGGAGAATCTGGATAAGTTAGGGGAGAAGGAATGTGCAACAGAGGTTGCGATATCGAGCCAGCTCCAGTTGAAGTCTTCAAAAGCATGTTCTGAAAGAATGGACAAACATGCTGTCCTTCGACGCTTACGGCAACGCAGGTCCTACCACAGAGCCAAAAGCGCTTCGGAGGCTCAGATAGTCACCACAGAAGCCGACGCCGCCACTGCGCTTGAACAGAAGTGGCTTCATCTGGCTGACTCTTTCTCCTCTCCGTAACTGCAAACACCATCAGCTATCCACATCATTAATATTAAGTCACCTTTGGAATACCACCTTCAATTCTTATCTGTAAGATATATTATGTATTATATGTGGTGATTAAAGATCTGTAATATATATTATGTATTATATGTGGT | |||||||||