miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse




mature miRNA: CGTCTTCCTCTTCCTCTTCCT
species: Physcomitrella patens
database: miRNEST
The numbers on the right side of the alignments show a score calculated for them.
When calculating the score, a mismatch is given a score of 1, bulge: 2, and wobble: 0.5.

Predicted miRNA targets
gi|208390393|gb|DC933438.1|DC933438 DC933438 ppgs full-length cDNA library; green sporophytes Physcomitrella patens subsp. paten

CGTCTTCCTCTTCCTCTTCCT
| ||||||||||||||| | |
GAAGAAGGAGAAGGAGATGAA

EST sequence (targeted fragment marked with yellow):
AGCTAAACCTGTCCGCGTGCAGTCAGAATCTCATGGGCACCTACAGCGAGCAGAAGCAGCAGCACAAGCAGAGGAAGCGAGGCTGACGCTGTTGTGTTTGTAAGTAGGAAGTAGAGGAAGAGGAAGAAGCAGAAGAAGTAGAAGCGGAAGGGCAAAGGTCGAGGCGGAAGTGTGAGTGTGTATGTGTGTGTGTGCGCGTGCTCGAAGCGCGCAAGTTTGAAGCCTGGACACGAGATTCGGATTCAGGCGTGGGGACGTCCGTTTGTAAGCGTAGGCAGTTTTGTGCAGTTTTGGGTCATGTTGGGGACGATATCACCCTTGTGCGAAGAGGACAGCGGGTTTGGGGCTGCGACGTGTGATTTGTTGCGGAAAGGTCCGCTACATCTCGCTTGTATAGTATCCTTGACTGAGTGAACGTTTTGAGTCTAAAATTTGGTCACCAGCACCGGATTGGTAGCCTGCCGCAGAAGTCCTTTGAACATATCTGCTTGGAGCTGGTAAAAAGCAGGAAACATCTTTTTTCTTCTAAGGCCTTGTACAACATGGATTTCACGAGGAACATGAGTAGCGTGCAACACGTCCAGAGGGTGTGGAGCCCCATGGACAATAGGACGGACATGAACGAGAAGAGAAGATCCCGCACAGGTTTGCGAGTCGAAGGAGGTGAAGACGANGTTATTTGCCCCAGGCCTCGACGTCCCACCACTGTAATTGCCTGTCACCGAGTTTGTGAACCNTCTCATCGACACCGAANTAATCTNCACTCGTCGAANGTGTGNTT



gi|208394082|gb|DC957163.1|DC957163 DC957163 ppgs full-length cDNA library; green sporophytes Physcomitrella patens subsp. paten

CGTCTTCCTCTTCCTCTTCCT
|.||.|||||||| ||||| |
GTAGGAGGAGAAGCAGAAGCA

EST sequence (targeted fragment marked with yellow):
GAGANGGTNCCGAAAGTCCAGGACAAGGACATCAAGAAGCGGAAAGGGGCCGTGAAAGAGACGAAGGCGAAGAAGCCGAAGGGTGGCAAGAAGTTGAAGGACCCGAATGCGCCGAAGCGGCCGCCGACGGCTTTCTTCATCTTCTTGAACGAGTTTCGGGAGGTATTCAAGAGGGAGAACCCGAACGTGAAGGGAGTGACAGCGGTGGGAAAGGCGGGAGGAGAGAAATGGAAGTCGATGTCAGAAGCTGAGAAGCAGCCTTTCATGACGAAGGCGGTGCAGAAGAAGTCGGAATACGACAAGACGATATCGGCGTACAACAAGAAACAGGATGAGGACGCGGAAGAGGTAGAAGCGGAGGAGTCGGACAAGTCAAAGTCGGAGATCAACGACGACGAAGACGAAGAGGAGGATGAGGATCTGGATGGCTAGGTGATCGAGCACTGATGCTGTAAGAATTAAGTGACTGATATGGTGGGAAACAGTTGCTTGGTGGGGTGGGTATTGAAGCAGAGGCGTGCGATTAAGTGGGATGAGAATTCTCATAAGGCGGGAGGAGCTCGTGTGTGACGCGTCGGATTGGAGATGAATAGGAAGTCACGGTTTTTGGGGTTGTAGTTCCGGCAGTGTCTTCGGGCTAGCGCGGTCTGTGAAGGGGACGGGAGGGAATGGAAATGAATCGAAAGGATAGTGGAGGATATGTGGTAAGGTGAAGTTGGTGGCACGGTCGTATTTGTAAATGTTGGTCAGGTTGGGGTGTTAGTAGGGGGTGGTGAGAGGAAGTTTGACAGTTGTGCTTGGTTAGCGGTGATCCTGTTAGTAGGAGACTGGATCGATTGTATTATGATGCAAGAGCAGCTCCCTTGTGGGGATCTGTATGTTGATCTGTATGAAGGATCCAAGGTCATTTTCTTTGTGTACGATATTGATTCTCTTT



gi|208388450|gb|DC945642.1|DC945642 DC945642 ppgs full-length cDNA library; green sporophytes Physcomitrella patens subsp. paten

CGTCTTCCTCTTCCTCTTCCT
||||.||||||||||||||||
GCAGGAGGAGAAGGAGAAGGA

EST sequence (targeted fragment marked with yellow):
ACGATCCGTGAACCCGGTGACTTTTATGAGTAACATGCNTTACGCATGTGGTATACTGTATAAGACACGGCTTCCACTACTTTTGGCGTTCAACAAGGTTGATGTTGTGAAACATCAGTTTGCCGTAGAGTGGATGGATGACTTCGAGGCTTTTCAAGCTGCTGTGGAGGGCGATTCGTCTTATTCCTCGAGTCTGAGCCGCAGTCTTTGCTTGGTTCTTGATGAGTTTTACAAAAATCTTAGCAATGCCGGAGTTTCAGCTGTGACAGGGGAAGGTATCGAGGATTTCTTCCACCAAGTGGACAAGTGTGCTGATGAGTACATGGAGTCTTACAGGCCTGATCTCGAGAAGCGGAAAGCTGAAAAAGCTCAAGTCGAGGCCAAACGGCGGGAAGCAAATATGGCTCGGTTGCAGAAAGACCTTGACGATTCTAAAGGTCAAAACGTGGTTCTGAGCGCTCCGCGTCGCATGGAAGATGGAGATGAAGAGGACGAATTAGATGAAGAGGAAGAGGAAGAGGAGGACGATGACGACGACGCAAATGGAGAAGAAGAGCGCGGTGATGAAGTATTCCGTGAAATTGGAGGTCGTCTCTGATTATTCAGATATTTTTGGGCTTTGTATGACTTATACATAACCGGAGTTACAGGATCAGTCTCCCATGTTTTTGATCATTTGAGCAATGGCCTGAAACTTGCAAATTCCTGGCAATATTCAATCTGAACAATCTTGATCGTACTTTAGAATGAGTAAAACTT



gi|208389674|gb|DC938278.1|DC938278 DC938278 ppgs full-length cDNA library; green sporophytes Physcomitrella patens subsp. paten

CGTCTTCCTCTTCCTCTTCCT
.||.||||||| ||||||||
TTAGGAGGAGAAAGAGAAGGA

EST sequence (targeted fragment marked with yellow):
TCGATTAAGCGAAGCGAGAGAGAGAACGGGAGTGAGTTTGCGTGTTAGCCATGGCTGCAATGGCTGCAGTGGCCTCCATGGCAACTATGACGTCGCCGAAGTCCATTGCACCGTGTTCCTCTATCGCCGTGGGTAAGGTCGTCGCCATAACTCCCTTGTGTCGGAGTACGAGAGTCGGGTTTGGTGTGGCGAATTTGAGTGGCAGGCGATGGACTCCACTCGTAGTGGTTCAGGCGCAGGTTGAGAAGAGCTCGGTGCAAGAGCGGAGCTGGGAGGAGAAGGACCGGGATTTGGTGGCGTCGCAGGGGTTTTTCCAGGACCAGAGTGTGGAGTATGAGGGGATTGAGGAGGCAGAGGAGGAGGAGGAAGAGAAAGAGGAGGATTACGGTGTTGATGTAGGTGCGAATGCANCGTTCAACGCTGCGGGAGGANAGGAANATTACNGCNAGGTGAACAANATCCTTGCNANTANANTGNTGNATGGNNANACNCANTATTTGATTGANTGNAANGACNACCACCCNNACNNCTGNNANCCCCCTGCTAACATTGCTAACNATNTGNTCTACNANTACNANACTCCNTGNTGNCANGCTGCCNAAAANGNNNATNATCNAANTTACNNNANCTTCTCCNANATNAANNTCNNNATNTC



gi|208399595|gb|DC908776.1|DC908776 DC908776 ppaa full-length cDNA library; antheridia and archgonia Physcomitrella patens subsp

CGTCTTCCTCTTCCTCTTCCT
||||.|||||||| || || |
GCAGGAGGAGAAGCAGCAGAA

EST sequence (targeted fragment marked with yellow):
AAGAAGAAGAAGACGACGAAGAGGAGGACGGGGTCGGTGGAGAAAAGGAAGCGTTGTGAGTGTGGAGTGTGGAGGGCATTTGTAGGGAGGGATCTCAACAGTCAGGGTCACTAGGGTTTCATCACAGACACACTCGCTTCTCTTTCCCTTGCTATCAATTGCGCAATCAATCTCCTGTAATTCGATCCGCTTTGCAGCGATGGGAGGTGGAGAGCAAGACGATGTGGTGAGTAGCTTCTTGGGGGTGACGGGGGCGACCGACGCGCAGGCGCGCTTCTTTCTTGAGAGCGCTAACTGGGAGCTGGACGCAGCTCTGATCTCGTTCTTTGAAGCGTCGGATGATGGGATGAGTGGCGGTGGACTCCCTGCGGTGGCGCGGACCGAGCGGGAGGAGGATGACGATGAGGAGATGAGCTTCCCATCGGCGCCGGTTCCAGCTCAAGCGCAGGATCAAGGGTTAGGTCAGGTGCCTGACGGATGGCCAGCTAGGTCGACGGGAGCGGGGGTGACGCAGGGGCAAGGGCGATTTCCTGGGAGTGGTCAGCCCAAGGGGAAGGAGAAGAAAAAAGGTAGCTCGTCGGGTCGGGGTGGAATTACGACTCTGTCCGATCTGGGTCGTCAAGCGGAGTCCGACGAGGATTCTGATGAAGGGCCGCAGGAGTATTACACGGGCGGTGAGAAANTGGCATGATGGTGCANGACCCCAGCAA



gi|208387134|gb|DC941306.1|DC941306 DC941306 ppgs full-length cDNA library; green sporophytes Physcomitrella patens subsp. paten

CGTCTTCCTCTTCCTCTTCCT
|||||.|||||. ||||. ||
GCAGAGGGAGAGAGAGAGAGA

EST sequence (targeted fragment marked with yellow):
GTTTTTTGTTTTGTCTGTGTCTGCGCCTCTGCCTGGCTCCCTTTTGTGTGTGTGAGTGTGTTGTTGTTGTGGTTGTTGTTGTGATTGGAGTGAGAGAGAGAGAGAGGGAGACGTTGTAGTAGTAGTTGTTATTTGAGGAGGAGGAGGGANCAGTGGGGGANTTATG



gi|208398538|gb|DC912383.1|DC912383 DC912383 ppaa full-length cDNA library; antheridia and archgonia Physcomitrella patens subsp

CGTCTTCCTCTTCCTCTTCCT
| |||||||||||||||.| .
GGAGAAGGAGAAGGAGAGGTG

EST sequence (targeted fragment marked with yellow):
GCTGCTTCCATCTCCCATCCCCGACGTAAGGCGCTTGCCTGCCTCCGTTGATGCGTCTTCGTTGTCCTTTTGAATCGCTATCGCAATCGTAATCGCAATTACAGGCGGCCGGGAAGTGGAGAGGAAGAGGAAGAGGACCCGGACGCGTCTGCGCATAGGAACCCTCCCTCTATTGCCATGGCGGACCCCGAAGTGGTGCGCGCTGAGTATAGGCGCAAGCTTTTGCAGCACAAAGAGCTCGATGCAAGGCTGCGAAATTTGCGTGAAAATGTGAAGGCTGCGAGGAAAGAGTTTGACAAGACAGAAGATGATTTGAAGGCGTTGCAGAGCGTGGGTCAAATCATCGGAGAAGTGTTGAGGCAGCTGGATTCTGAACGCTTAATTGTGAAGGCGAGCAGTGGCCCACGGTATGTGGTTGGATGCCGCAACAAGGTGGATAAAGAGAAGCTGGTGGCTGGTACTCGAATTGCACTAGACATGACCACCCTCACAATCATGCGAGCGCTTCCTCGAGAGGTTGACCCCGTAGTGTACAACATGCTTCATGAGGACCCCGGAAATATCAGCTATTCAGCTGTTGGAGGACTAAGTGACCAAATTCGAGAACTTCGTGAGTCGATTGAGTTGCCGTTAATGAATCCTGAACTCTTTCTGCGAGTTGGCATTAAACCTCCAAAGGGTGTGTTGTTATATGGGCCTCCTGGGACTGGTAAACTCTTTTAGCACGAGCATTGCCAGCANCATTGATGCTANT



gi|208397659|gb|DC916076.1|DC916076 DC916076 ppaa full-length cDNA library; antheridia and archgonia Physcomitrella patens subsp

CGTCTTCCTCTTCCTCTTCCT
| ||||||||||| ||||||
GGAGAAGGAGAAGAAGAAGGC

EST sequence (targeted fragment marked with yellow):
GTGTTTTTGCTGCCCCTGCTTCCCGTGCTCCTCGTCGTCATTGTCGTTGCACTCGTGACGCTCCTCTCCATAGCTGCTACTGCCACTCTCCAATCAATCATGGGCGATGCGGTGGAAGAGAAGTCTCAGGAGATTCCAGAGGAGGTAGCAGAGGAGAAGGTGGAAGAAACTGCCGAGGAGGAAGCAGCGGAAGAAGAAGAGGAAGAGGCCCCAGTGGAGGAAGAGGAAGAGGAAGAAGTGGTGGACCCAAAGGCGGAAATAGAGGAGTCGTGCAAACCGAAGTGTGTGAAGCAGCTTTTGGCGTTGCAGGCGTGTGAGAAGCGCGTGGAGGAGGATGAAGAGGGTCAGAAGCATTGCACAGGGCAATATTTCGATTACTGGGGTTGCATCGACAAATGCACGGCACCGAAGCTGTTCCGAAAGCTGAAGTAGGGGGTTGATGTAGCTGCGGGAGTGGAGACAGGAGGCTTCTGGCTAACGTCGAGGGGTCAGAAAGTAGAGGCAATGTCCAAATTTG



gi|208395564|gb|DC928979.1|DC928979 DC928979 ppaa full-length cDNA library; antheridia and archgonia Physcomitrella patens subsp

CGTCTTCCTCTTCCTCTTCCT
|.||||||||||||||||| |
GTAGAAGGAGAAGGAGAAGAA

EST sequence (targeted fragment marked with yellow):
TTCACAACNCCTCCTGTACGGAAGTCAGCGAGCATGCTGGATTTGGGACAATTGTGTCAGATTGGGGNCAAGGAATTCGATGTGGAGGCAGTATTTCAGAACGAGGCATCTGCTGTTATAGCTGGTCTTCCTTCTATTGCAGATTCTTCACATGTTCAAATGTCGTCTAGTGCTCCACTCAACATGGACGTTGATGATTCTCTGATCAACCAGGCCATGGAAGAAGAGGACAGTGACGAAGAAGAGGAAGAGGAAGATGAGATGGATGCGGGTCCCAGCATGATGGACACAAATGAAGTAGTTGTGAAACGAGGTAGAGCGTATTTGAGCCAGAACGAAAGACTTTACGATGCTGAAGGAATTCAAAATCCACATGCCAAACGAGCACTCAAAAAGAAGATGAAGAAAGCAGCTAAGAATGGTCCTTTTCCAACGAGCAATGGAAACGCATCTGATGACTACAATTTTGAAACAGACTATATTGAAGATGGAATTACTGGAGACCAGGAGGGTGATGGTGAGGATGCAATGGAGGGCGTCAATTAGGTTCGTCCTGGAGATGAGCACTCCTGATGCTTGTTTATTCATCGACTTTTAGATATGCCAACGTAAGTCTCGCTCTTCATGGAGACCTTGAAGGGGATAGTTCCTTTCCTCATTACTTTTTTTCCTTTCTTGTAGTCAGAGGTACATCATTGCTTCCCTTTTCTAAATGTGAAGGACCCATGCGGAGTGCTTT



gi|208391459|gb|DC937607.1|DC937607 DC937607 ppgs full-length cDNA library; green sporophytes Physcomitrella patens subsp. paten

CGTCTTCCTCTTCCTCTTCCT
| ||||||||||||||.| ||
GAAGAAGGAGAAGGAGGACGA

EST sequence (targeted fragment marked with yellow):
ACAGGTTTCTTCGATCATCGGCAGACGTAGTATCGATATTTTTGAGAATTTAATGCATGTGTTCGAGTGTACTCATACGAAAATTGGGGAGAAAGTTTAGGAGGTGCCGATTCTGCGTTGATTACAGGTCTGAAGGAGAAAAGGGGAAGTATGGATGACAGTTTGTAAACTACGGTGGGCCGGAGGTAGACACGAACGAGGAGAACTCTGAGCAGGAGGAAGAGGAAGAAGGGAGACGTGATGAGTCTCTAGAGGACGGGTTTGATGACGATGAGGACGATGTCATGGATGCCCGGCGAGGGGGGGGGGGTGATTGTNCTGGCGGAGGAAAANAANTATTATTCCCNCTGCCATGGAANTGTATGGCGAGGGTGTGTAAACGTTTGTTACTTCTTTATAANCCTTCCNAAAANCCCNTCATCAANCCTANAANCCTGAAAAANTTTGAGGTGGTACCNAAGGAGGTGTAAAGACNCNCNCCGNGANCACNTCACCCNCTAACAAGGAAAANCACTTGCGGTTCACGGACNCTAGGATTGACNAGCAAGANCGGCAAATGTCAATCAGGANCGTANTCTATGTCTCTTTTGTCANAAAACTGTGCAGGAAAATCTCATTTGTGCAACCCAATGGACCCNCCATTCCNCATGANCT



gi|208386295|gb|DC953008.1|DC953008 DC953008 ppgs full-length cDNA library; green sporophytes Physcomitrella patens subsp. paten

CGTCTTCCTCTTCCTCTTCCT
..||||||||||||||.|||
TTGGAAGGAGAAGGAGAGGGA

EST sequence (targeted fragment marked with yellow):
GAAAGATTTTATGTCTGCTTNGAAGAGANGGGGCNTCAANCAAGGGGAGAATTCCTTTTTGTNTTNGANGAATCNTTCAGAATNGCTNNTGTNGTNTAGCANGAATGTAAATACTTTCAAGCTTATCTCACCCCGGAATNNGAACCTNTANNACGTNNNGAGGGCNGACAAATTGATTCTANNTGAGTCGTCGGTGAAGTACTTNGANCAACAGTATGGCACATCTGGGTCACANGAAATCGTTGCTGGGGATNTTGAGGGAGAGGAAGAGGAAGGTTCCATTGANTAGGCCAATNAAGGGGTTGTAGAGCCTGAAGCGTATGTGTTTAAGAGTTAGGGTTNAAATGCTTACTTCAATTANGTGAAAGTACAGTCGGGNTTCAGTGNTGNTTTTTTAGCACCCAGTAACTCCTGTCATCCTCACATGTAGTGTGACCTCCATGGNTAGCTCACTGTGCTCTCTGGCCCTCGGAGTAAGCAGAACTGTGATCTTTGGTCTATTAGCTAACATT



gi|208400300|gb|DC924938.1|DC924938 DC924938 ppaa full-length cDNA library; antheridia and archgonia Physcomitrella patens subsp

CGTCTTCCTCTTCCTCTTCCT
..||||||||||||||.|||
TTGGAAGGAGAAGGAGAGGGA

EST sequence (targeted fragment marked with yellow):
GGTGGTGGTGTAGTGTTCGGCCCTAAGCCCAAGGATTGGTCTATTAAGATCANCAAGAAGGAGAAGAGATTAGCCATTAGCACTGCTCTGCAAAGTGCTGGCGCGAACACTGTTGTCGTGGAGGATTTTGAGGAAAAATTCTCTACGCCTAAGACGAAAGATTTATGTCTGCTTTGAAGAGATGGGGCGTCAAGCAAGGGGAGAATTCCCTTTTGTTTTCGATGAATCCTTCAGAATCGCTCGTGTTGTCTAGCAGGAATGTAAATACTTTCAAGCTTATCTCACCCCGGAATCTGAACCTTTACGACGTCTTGAGGGCCGACAAATTGATTCTAACTGAGTCGTCGGTGAAGTACTTAGAGCAACAGTATGGCACATCTGGGTCACATGAAATCGTTGCTGGGGATGTTGAGGGAGAGGAAGAGGAAGGTTCCATTGAGTAGGCCAATGAAGGGGTTGTAGAGCCTGAAGCGTATGTGTTTAAGAGTTAGGGTTTAAATGCTTACTGCAATTAGGTGAAAGTACAGTCGGGCTTCAGTGCTGATTTTTTAGACCCAGTAACTCCTGTCATCCTCACATGTATGTGACCTCCAGGATACTCATGTGCTCTCTGGCCCTCGGAGTAAGCAGAATGTGACTTTGGTCTATTACTAACATTCGTCTCTCAAATTCTTCATTTT



gi|208396232|gb|DC924026.1|DC924026 DC924026 ppaa full-length cDNA library; antheridia and archgonia Physcomitrella patens subsp

CGTCTTCCTCTTCCTCTTCCT
||||||| ||||||||||| |
GCAGAAGTAGAAGGAGAAGTA

EST sequence (targeted fragment marked with yellow):
TTAGAGAAGNCTGTCGGAACGGAGATCGAGTGGAATTCTGNCAAGAACTTTAACGCAGAAGGTGATGAAGAAGAAAGCGAAAAAAGGATCAAAGAACACAAAACCTGTGACGAAGACTGAGAATTGTGATAGTTTTTTCAACTTCTTTAATCCTCCTCAAGTACCTGAGGATGATCAAGACATTGATCAAGAGATGGTCGAGCAACTTCAAGACTTGTTGGAGCAAGACTACGACGTAGGGTCCACGATTAGGGACAAGATTATTCCTCATGCTGTTTCCTGGTTTACGGGAGAGGCTTTGCAAGGTGAGGATTTTGAAGATGATGACGAAGAAGGCGACGACGACGACGACGACGACGAAGATGACTATGATGAAGATGAAGACGATGAAGAGGAAGATGAAGACGAGGAAGATGATGATGAAGAAGAAGTGCGAGGCCGCAAGCGTGTAGTTCCCACACGGAAGGGTGGTGCATCCAAGGCGTCTGATGGACAGCAACAAAGTGGCGAGCAGCCTCCGGAGTGCAAACAGCAGTAACCTTATGGGAAGGACGGATAATTTATTTTGAGGTTGAGATAGTACATTAAAAATTGTGGCAGCATTTTGAGGGACAAGATCCCAACTGAATCTTTAGTTGGCGAGGCACCTGCAATTATTACCTAGTTCGAGTGCTGAGGTTTTCTCGTTCATCCTCGAGGATGGTTCGTTAAATCTATTTGTTCGTGATTAGTGGATAGGGCATGAAATATTGCAGTGAAATCGGATT



gi|208388450|gb|DC945642.1|DC945642 DC945642 ppgs full-length cDNA library; green sporophytes Physcomitrella patens subsp. paten

CGTCTTCCTCTTCCTCTTCCT
| ||||||||||||||||| |
GGAGAAGGAGAAGGAGAAGTA

EST sequence (targeted fragment marked with yellow):
ACGATCCGTGAACCCGGTGACTTTTATGAGTAACATGCNTTACGCATGTGGTATACTGTATAAGACACGGCTTCCACTACTTTTGGCGTTCAACAAGGTTGATGTTGTGAAACATCAGTTTGCCGTAGAGTGGATGGATGACTTCGAGGCTTTTCAAGCTGCTGTGGAGGGCGATTCGTCTTATTCCTCGAGTCTGAGCCGCAGTCTTTGCTTGGTTCTTGATGAGTTTTACAAAAATCTTAGCAATGCCGGAGTTTCAGCTGTGACAGGGGAAGGTATCGAGGATTTCTTCCACCAAGTGGACAAGTGTGCTGATGAGTACATGGAGTCTTACAGGCCTGATCTCGAGAAGCGGAAAGCTGAAAAAGCTCAAGTCGAGGCCAAACGGCGGGAAGCAAATATGGCTCGGTTGCAGAAAGACCTTGACGATTCTAAAGGTCAAAACGTGGTTCTGAGCGCTCCGCGTCGCATGGAAGATGGAGATGAAGAGGACGAATTAGATGAAGAGGAAGAGGAAGAGGAGGACGATGACGACGACGCAAATGGAGAAGAAGAGCGCGGTGATGAAGTATTCCGTGAAATTGGAGGTCGTCTCTGATTATTCAGATATTTTTGGGCTTTGTATGACTTATACATAACCGGAGTTACAGGATCAGTCTCCCATGTTTTTGATCATTTGAGCAATGGCCTGAAACTTGCAAATTCCTGGCAATATTCAATCTGAACAATCTTGATCGTACTTTAGAATGAGTAAAACTT



gi|208388382|gb|DC949326.1|DC949326 DC949326 ppgs full-length cDNA library; green sporophytes Physcomitrella patens subsp. paten

CGTCTTCCTCTTCCTCTTCCT
||||||||||||||| |||
GCAGAAGGAGAAGGAATTGGA

EST sequence (targeted fragment marked with yellow):
GGAGCAGCGGCTGATATTGACGAGGACGAGTTGNAGCTGAGCTTGAGGACCTTGAAGGAGCCGAGTTAGAAGAACAATTAATTAATCCATCTGCCCAGGAGCTCCCACAAGCATACCGGCNTAATCCAGTTCNTGCTCAGAAACCCAAACCAACTCAGGTTAAGGAAGAGGAAGACGAACTTGCAGCTCTTCAAGCTGAAATGGCTCTTTAGAGACTTGACGCCTCCAATTGCTGCTTGAATCTGAATTTTTATGATCACATCAGGTCAGGCTTCTATCCGCTTTCGCTTCAGGTTTGTCCCAACTTGATACCCAAGGGCATTGTCGCTACAACGAATATACCGATAACTGAAAATCACAATGAGAACCGACTCGTTTTCCAGAATTCTGGATGCTGGGCCGGGTGGTACTTGACACCGATGATGGATTTTAGCCTCAGCACTTCTTCAGTCGTTTGGAATGGTGAAATAACTCTTAGAAATTAACTCAAATCTCGGCATGCCCTGTAGAGAAATAGTTTAACTATCAAGAATTTGGCATGGATTTCTCTTCTCCTTTGCGCCTCATGAGATCAGCAATTGGGTCGCTACTGATTGCTTGTCCTCCTGTTGCTGCTTGTGTATTACTGTAACTCCTACCTTCTTCATATTATTTTTTAAAGCTACCTTGACATATACCATGCGCACAGGTTACAGCAATTTACTACAGGATCTAGTGAAACGTTAGCATTACTACCAAAGTGATCCTGCTGAT



gi|208395314|gb|DC924424.1|DC924424 DC924424 ppaa full-length cDNA library; antheridia and archgonia Physcomitrella patens subsp

CGTCTTCCTCTTCCTCTTCCT
..||||||||||||||.|||
TTGGAAGGAGAAGGAGAGGGA

EST sequence (targeted fragment marked with yellow):
TACAANCAGAAGGGTACCGGAAGGGCTCGCCAGGGGTCTATTAGGACGCCTATTCGTCCTGGNGGTGGTGTAGTGTTCGGCCCTAAGCCCAAGGATTGGTCTATTAAGATCAACAAGAAGGAGAAGAGATTAGCCATTAGCACTGCTCTGCAAAGTGCTGGCGCGAACACTGTTGTCGTGGAGGATTTTGAGGAAAAATTCTCTACGCCTAAGACGAAAGATTTTATGTCTGCTTTGAAGAGATGGGGCGTCAAGCAAGGGGAGAATTCCCTTTTGTTTTCGATGAATCCTTCAGAATCGCTCGTGTTGTCTAGCAGGAATGTAAATACTTTCAAGCTTATCTCACCCCGGAATCTGAACCTTTACGACGTCTTGAGGGCCGACAAATTGATTCTAACTGAGTCGTCGGTGAAGTACTTAGAGCAACAGTATGGCACATCTGGGTCACATGAAATCGTTGCTGGGGATGTTGAGGGAGAGGAAGAGGAAGGTTCCATTGAGTAGGCCAANGAAGGGGTTGTAGAGCCTGAAGCGTATGTGTTTAAGAGTTAGGGTTTAAATGCTTACTGCAATTAGGTGAAAGTACAGTCGGGCTTCAGTGCTGATTTTTTAGACCCAGTAACTCCTGTCATCCTCACATGTATGTGACCTCCAGGATACTCCATGTGCTCTCTGGCCCTCGAG



gi|208384952|gb|DC903459.1|DC903459 DC903459 ppaa full-length cDNA library; antheridia and archgonia Physcomitrella patens subsp

CGTCTTCCTCTTCCTCTTCCT
| ||||||||||||||| | |
GAAGAAGGAGAAGGAGATGAA

EST sequence (targeted fragment marked with yellow):
ACTTTCGGCGGCCGCGTTGCTTCGCGGTGAGGGAGTCGGATACGGCGAGCAGCGTGGGCCGCGGGCACTGGTAGCGATACTCTCTGTGTGATGTGCTGTGGAAGCTCGTCAGGCAGGTGGGTAACGCTAAAAGGGCTTTTTTGCGGGTGATGGTGGGAACGAATCGAGGAAAAGTANGATTGCGCCACAGCTACTTAGCCCGCTGGGGCTATCAATTACGAGTGTAGCTAAACCTGTCCGCGTGCAGTCAGAATCTCATGGGCACCTACAGCGAGCAGAAGCAGCAGCACAAGCAGAGGAAGCGAGGCTGACGCTGTTGTGTTTGTAAGTAGGAAGTAGAGGAAGAGGAAGAAGCAGAAGAAGTANAAGCGGAAGGGCAAAGGTCGAGGCGGAAGTGTGAGTGTGTATGTGTGTGTGTGCGCGTGCTCNAAGCGCGCAAGTTTGAAGCCTGGACACGAGATTCNGATTCAGGCGTGGGGACGTCCGTTTGTAAGCGTAGGCAGTTTTGTGCAGTTTTGGGTCATGTTGGGGACGATATCACCCTTGTGCNAAGAGGACAGCGGGTTTGGGGCTGCGACNTGTGATTTGTTGCGGAAAGGTCCGCTACATCTCGCTTGTATAGTATCCTTGACTGANTGAACGTTTTGAGTCTAAAATTTGGTCACCAGCACCGGATTGNTANCCTGCCGCAGAANTCCTTTGAACATATCTGCTTGGANCTGGTAAAA



gi|208396232|gb|DC924026.1|DC924026 DC924026 ppaa full-length cDNA library; antheridia and archgonia Physcomitrella patens subsp

CGTCTTCCTCTTCCTCTTCCT
|.||||||||||| || || |
GTAGAAGGAGAAGTAGCAGAA

EST sequence (targeted fragment marked with yellow):
TTAGAGAAGNCTGTCGGAACGGAGATCGAGTGGAATTCTGNCAAGAACTTTAACGCAGAAGGTGATGAAGAAGAAAGCGAAAAAAGGATCAAAGAACACAAAACCTGTGACGAAGACTGAGAATTGTGATAGTTTTTTCAACTTCTTTAATCCTCCTCAAGTACCTGAGGATGATCAAGACATTGATCAAGAGATGGTCGAGCAACTTCAAGACTTGTTGGAGCAAGACTACGACGTAGGGTCCACGATTAGGGACAAGATTATTCCTCATGCTGTTTCCTGGTTTACGGGAGAGGCTTTGCAAGGTGAGGATTTTGAAGATGATGACGAAGAAGGCGACGACGACGACGACGACGACGAAGATGACTATGATGAAGATGAAGACGATGAAGAGGAAGATGAAGACGAGGAAGATGATGATGAAGAAGAAGTGCGAGGCCGCAAGCGTGTAGTTCCCACACGGAAGGGTGGTGCATCCAAGGCGTCTGATGGACAGCAACAAAGTGGCGAGCAGCCTCCGGAGTGCAAACAGCAGTAACCTTATGGGAAGGACGGATAATTTATTTTGAGGTTGAGATAGTACATTAAAAATTGTGGCAGCATTTTGAGGGACAAGATCCCAACTGAATCTTTAGTTGGCGAGGCACCTGCAATTATTACCTAGTTCGAGTGCTGAGGTTTTCTCGTTCATCCTCGAGGATGGTTCGTTAAATCTATTTGTTCGTGATTAGTGGATAGGGCATGAAATATTGCAGTGAAATCGGATT



gi|208386979|gb|DC941627.1|DC941627 DC941627 ppgs full-length cDNA library; green sporophytes Physcomitrella patens subsp. paten

CGTCTTCCTCTTCCTCTTCCT
||||||| ||||| ||.|| |
GCAGAAGAAGAAGTAGGAGTA

EST sequence (targeted fragment marked with yellow):
GTTATTCTCCTCAGACATTCGGTTGTTGTTTTTCTCGTCGGCTGCAATGGAGTTTTGGGGGGTTGAAGTTCGGGCAGGGAAACCAACTCAATGTTCTCCTGGTGAAGGAATGTACTTGCACGTATCCCAGGCCGCTCTCGGGGAAAGCAAGGCGAAGGGAGGGAAAGGAAGTGAAAGGGTTGTGTTGAAGGTGCATGTTGATGGCAGCGATATTGTGCTTGGAACTCTCGCAGAGGGGAGGTGCGATCAGATGCCTCTAGATCTTGTGTTTGACAGTGACTTCAGTGTATCGCACAGCAGTAGCTCTTCAAGCATTTTCCTATGCGGGTACCGAACGGAGGGTCCTAGAGAATACGATTCAGAAGATGAGGATGAAGAAGAAGACGAAGAAGATGAAGATGAGGAAGATGCCGGTGTGCCAGTAGCAGTTCCTATTAAGGCGAACGGGGCTGCAGCCGAGATGCTCAGTAAGGTGACTGACAAAGCGGCGGCCGCTGTAGCAAACGCAATTGCCAAGGGCATTGAGAAGAAAGTTGTGAAGAAACAAGTAATTCAGGATGACTCTTCTGACGAGGAGGATGATTCTGAAGACTCAGATGATTCTGATGAGGATGACGGTATGGGACATCCGTTCGTGAGCGACCTAGCTTCCGAATCCGATGACGAGTTTGATGCCNGTGATGACGATTCTGATGAGGACATG



gi|208390352|gb|DC933397.1|DC933397 DC933397 ppgs full-length cDNA library; green sporophytes Physcomitrella patens subsp. paten

CGTCTTCCTCTTCCTCTTCCT
| ||||||||||| ||.|| |
GGAGAAGGAGAAGAAGGAGCA

EST sequence (targeted fragment marked with yellow):
GATTCACTCCGTGTCTTCGCCGAGATCCAGACAATCCGCTGGCCGGAAACATTCCACGCCGCCTTCTCCGTTGTTAATTTGGGTTTAGAAGCTGCTGCATCAGCAGGATATGATTTTGCAAAACTTCGGAGACCAGGTTTAGAAGCCGACGATTCGGCAGGATTCGAAGGTTTAGGGTACACTGAGCACGAGGGCTTCGACAAAAGAAGTCACGAGGAAGAAGAGGAAGAGGTTACGAGTTGGGTTCCGCGAGGGTTGGCTGTTTTGTTGCGTGAGGTGAGAGATCTGTGGTTGTGGGGTTGGGTGGGCGGAAGAGGATTTGTGAAAGGGGGTTGTATGGTGTTAGAGCAGCTGGGTTTTCGTGAAGATGGTGTTCTGGGAGGATTATGTCAGCGATGAGGTGCTGGGCACTTTCGCGCCCATTGTGGTGTACTGGATTTACTCAGGGATGTATCACTACGTGATTCCACCGTATGAGAAGTATCGTTTGCATTCGGTCGAGGAAGAGGAGAAGAACTTGGTGACTGTGCCGCAAGTGGTTAAAGGTGTGCTGTTGCAGCAAGTGGTCCAAGTCGCTGTCGCTCTGCTTCTGTTTACAGTAACCGGTCAAGAGGGGGTAGTACAGCAGCCACCGTTATGGATTGCGGCGCTCCAGTTTGTGGTGGCCATGTTCATAATGGATACCTGGCAGTACTCCTGCCACCGGTGGATGC



gi|208400531|gb|DC925281.1|DC925281 DC925281 ppaa full-length cDNA library; antheridia and archgonia Physcomitrella patens subsp

CGTCTTCCTCTTCCTCTTCCT
||||||||||||||| |||
GCAGAAGGAGAAGGAATTGGA

EST sequence (targeted fragment marked with yellow):
TAATCCATCTGCCCAGGAGCTCCCACAAGCATACCGGCCTAATCCAGTTCCTGCTCAGAAACCCAAACCAACTCAGGTTAAGGAAGAGGAAGACGAACTTGCAGCTCTTCAAGCTGAAATGGCTCTTTAGAGACTTGACGCCTCCAATTGCTGCTTGAATCTGAATTTTTATGATCACATCAGGTCAGGCTTCTATCCGCTTTCGCTTCAGGTTTGTCCCAACTTGATACCCAAGGGCATTGTCGCTACAACGAATATACCGATAACTGAAAATCACAATGAGAACCGACTCGTTTTCCAGAATTCTGGATGCTGGGCCGGGTGGTACTTGACACCGATGATGGATTTTAGCCTCAGCACTTCTTCAGTCGTTTGGAATGGTGAAATAACTCTTAGAAATTAACTCAAATCTCGGCATGCCCTGTAGAGAAATAGTTTAACTATCAAGAATTTGGCATGGATTTCTCTTCTCCTTTGCGCCTCATGAGATCAGCAATTGGGTCGCTACTGATTGCTTGTCCTCCTGTTGCTGCTTGTGTATTACTGTAGCTCCTACCTTCTTCATATTATTTTTTAAAGCTACCTTGACATATACCATGCGCACAGGTTACAGCAATTTACTACAGGATCTAGTGAAACGTTAGCATTACTACCAAAGTGATCCTGCTGATTGTACTCCAATGTGAGGATTGTATACCAAAACATT



gi|208397659|gb|DC916076.1|DC916076 DC916076 ppaa full-length cDNA library; antheridia and archgonia Physcomitrella patens subsp

CGTCTTCCTCTTCCTCTTCCT
| |||||||||||||||||||
GAAGAAGGAGAAGGAGAAGGA

EST sequence (targeted fragment marked with yellow):
GTGTTTTTGCTGCCCCTGCTTCCCGTGCTCCTCGTCGTCATTGTCGTTGCACTCGTGACGCTCCTCTCCATAGCTGCTACTGCCACTCTCCAATCAATCATGGGCGATGCGGTGGAAGAGAAGTCTCAGGAGATTCCAGAGGAGGTAGCAGAGGAGAAGGTGGAAGAAACTGCCGAGGAGGAAGCAGCGGAAGAAGAAGAGGAAGAGGCCCCAGTGGAGGAAGAGGAAGAGGAAGAAGTGGTGGACCCAAAGGCGGAAATAGAGGAGTCGTGCAAACCGAAGTGTGTGAAGCAGCTTTTGGCGTTGCAGGCGTGTGAGAAGCGCGTGGAGGAGGATGAAGAGGGTCAGAAGCATTGCACAGGGCAATATTTCGATTACTGGGGTTGCATCGACAAATGCACGGCACCGAAGCTGTTCCGAAAGCTGAAGTAGGGGGTTGATGTAGCTGCGGGAGTGGAGACAGGAGGCTTCTGGCTAACGTCGAGGGGTCAGAAAGTAGAGGCAATGTCCAAATTTG