| mature miRNA: CTGAAGTGTTTGGAGGAACTT species: Picea abies database: miRNEST The numbers on the right side of the alignments show a score calculated for them. When calculating the score, a mismatch is given a score of 1, bulge: 2, and wobble: 0.5. |
| Predicted miRNA targets | |||||||||
gi|280978604|gb|GT884390.1|GT884390 65-2-1-C08.r.4 Non-normalized library of 1 month old bare root Picea abies cDNA, mRNA sequen CTGAAGTGTTTGGAGGAACTT EST sequence (targeted fragment marked with yellow): GCTTGTATACGACTCACTATAGGCGATTCGAGCACGCACAGCAAGCGGGTCTCCAGTTCCCCGTCGGCAGAATCGCCCGGTTCCTCAAGCCGGGAAGTATGCCGAGCGGGTGGGAGGGGGCGCCCCCGTCTACCTTGCGGCCGTTCTTGAATATCTGGCAGCCGAGGTACTGGAGCTAGCAGGTAATGCGGCCCGGGACAATAAGAAGACGAGGATAGTTCCCCGTCACATACAGTTGGCCGTCAGAAATGACGAGGAGCTAAGCAAACTCCTGGGTGCTGTCACCATAGCCAATGGTGGCGTCATGCCCAATATCCACAACATTCTGCTTCCTAAAAAGGCCGCTGCGTCTGGCGCTTCGTCCAAATCTGGGAAGGGCGACGAGGAGAGCTAACAGCCATGGAAATTTCTCCAAGCACTTCAGCTTTGTATCAACAGTGTAGTTGGGTAAGGATAGGTCCTTTGGCTGCATGATTTCTTATTAAGTTCTAGTTCGTTTTTCTATAACTTCCTGCGCTAAGCGGGGAATTCCACAAAAGCATCACTGGTGTGCAATACCTCCTTACAAGGTCAGTGGTGCCCTTAATATTCAAATAAACCCCAGCGAATAAAATTTCTCAATTGCATTGCTTGAGAAATTCATAGTTGAAATACTGCATTTACACAGGAC | |||||||||
gi|89956162|gb|AM169120.1|AM169120 AM169120 K00001 Picea abies cDNA clone K0000100007E04F1, mRNA sequence CTGAAGTGTTTGGAGGAACTT EST sequence (targeted fragment marked with yellow): CGCCCCCGTCTACCTTGCGGCCGTTCTTGAATATCTGGCAGCCGAGGTACTGGAGCTGGCAGGTAATGCGGCCCGGGACAATAAGAAGACGAGGATAGTTCCCCGTCATATACAGTTGGCCGTCAGAAATGACGAGGAGCTAAGCAAACTCCTGGGTGCTGTCACCATAGCCAATGGTGGCGTCATGCCCAATATCCACAACATTCTGCTTCCTAAAAAGGCCGCTGCGTCTGGCGCTTCGTCCAAATCTGGGAAGGGCGAGGAGGAGAGCTAAGAGCCATGGAAATTTCTCCAAGCACTTCAGCTTTGTATCAACAGTGTAGTTGGGTAGGGATAGGTCCTTTGGCTGCATGATTTCTTATTTAGGTCGTAGTTCGTTTTTCTATAGTTTCCTGCGCTAGGCGGGGAATCCCACAGAAGGCATCGCTGGTGTGCAATACCTCGTTACAGGTCGGTGGTGCCTTCAAATTCAAATTAAACGCAGCCAATGAGATTTCTGTATTCATTACTTGGAAATTGGGAATTGAATTCTGTATTTTCACAGGATGGATTTGTAAAATTGAAATCTCTCTTTGGGATCGATTT | |||||||||