| mature miRNA: TATCGGAATCTGTTACTGTTTC species: Picea abies database: miRNEST The numbers on the right side of the alignments show a score calculated for them. When calculating the score, a mismatch is given a score of 1, bulge: 2, and wobble: 0.5. |
| Predicted miRNA targets | |||||||||
gi|280981286|gb|GT887133.1|GT887133 65-2-4-B11.r.5 Non-normalized library of 1 month old bare root Picea abies cDNA, mRNA sequen TATCGGAATCTGTTACTGTTTC EST sequence (targeted fragment marked with yellow): CTTTGCTTCGGGTTCTAAAGTTCTTGCTTTGGAATGTATTTTGAATTGGGTGAATTCAAGCTAGGCAGGAAATGATGCAATTGTGGATTATAATGTTTGTTGGGTGGTTGAGATGGCTATTTANCATCGCCTCAGGACAGCTTGAGGTAAATGAAACAGTAACAGATTCCGTTAATTTACCAGCTGCTTTAGGAATTACCTGCATAGGCAATTTAGCAGCTTTTACTGCAATTTTGCTTTGAGTGGGTGTTTCTAAAGATTGGCATGGAAGCCGATTGATGAATCGGCTCTTGATTTTAGAGTTAATTGCTGGTTGGGATGGTTGTTTGCATCTGTATTGGGGAAGATGTCATCATCTCACAAAGCCTTATGAGAGAGACCCTATTATGCCTTTAGAAGTGATAGTTTGGGAAATAGTGTGCACTGTAGCAAGCATANCAGGAACTTTGGGTGTAAAGCTTTTGAGAGATGGATATATGGTGAGATGCAAAGGCTAGTTTGGGTAAAATGACGAATCTGATCCGCTAAAACGCACAAAACTGTTTCCGAGAGATCAAGAACGCGTTTGGTTGAATTTATTCACAGATATGTGTTAAATGTTTTCAAAATTCTTTAAAATCCGGAAA | |||||||||
gi|90032317|gb|AM172834.1|AM172834 AM172834 K00004 Picea abies cDNA clone K0000400011E10F1, mRNA sequence TATCGGAATCTGTTACTGTTTC EST sequence (targeted fragment marked with yellow): CAGAGCTCGCTGCACGATATGCCTAGGGCGCAGCGACAGGTTGTGATAGAAAACTTAGGCAATGCATTTTGTTGTTGGTAAATTTGAGGTTTTGCATGGAACCGCCATAAACAACTTGTGCTTATGTTTTGTATCGGAATCTGTTACTGTTTCTTAGGCCTCAAGCAACTATGGAAATCCCTGGAAGCTGCTGCATCATACGCCTCAGACGCAGCAGCAGATTCTGATAGAAGACTCAGGCAACGCATTTGTTGTTGGTGGGTTGAATGCTTTCTGCAAAGCCACCAATAACAAGCCGCCTGGTGTTTTGTATCGGAATCTGTTACTGTTTCCTAGGCGTCAAGCAAATCTAAATCTCGCAAAAGCTGAAATGGCTA | |||||||||