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mature miRNA: ATAGATTCTCTTGTTCTGCCA
species: Picea glauca
database: miRNEST
The numbers on the right side of the alignments show a score calculated for them.
When calculating the score, a mismatch is given a score of 1, bulge: 2, and wobble: 0.5.

Predicted miRNA targets
gi|225914734|gb|GO364615.1|GO364615 GQ03419.B7P1_N20 GQ034 - Needles - Mid-season Picea glauca cDNA clone GQ03419_N20 5', mRNA s

ATAGATTCTCTTGTTCTGCCA
||||||.|||| ||.|.|| |
TATCTAGGAGATCAGGGCGAT

EST sequence (targeted fragment marked with yellow):
GCAGTCGACCATAACAGATGGAAAAGATCCCAGAGGCCATGACACCTCTGAAAAATATAGTAATCATGATGGTGAAGACACAAGAACCTCTCATGGGGACAAAGAAACTGTTTGTTTTGATGCAAGAAATGCCAGAGATTGGGAGCGTTCACGAGGGACTCATGGCCAAAGTGATCATGCAGGGTCATCAAAATCTTCGTATCGTCATCAGTCTACTTCTGCTTCTGTAACCATGCCATCAGAACCTCCTGGAAAATCGCATCAAATACCATCAACTCTTGGTACAGTTCCAGTCATTACAGCTCCAAAAGGTCCATCACAGAGTCTGCAGAATTTATCTGTTGCTGATGCTCCAAAAAGTGATCTAGCCAGCGATCTTTTCAACCTCCTCAATATTGAAGATCCTCTGCCAAGTAGTATTGGAACATCCTCTCAAGTAGATGATAAATCATGGGCAGCATTTCAATCCTCTGAAACAACAAAGCCAGGTGAGAAAAAGGTCATGCAAGAGTCGGTGGCAGCTAAGAATGATTTGATAGCGGGACTAGAGGATCTATTCAAAGCATCACCATCCCTTACAGACAAACCTGCACAGCCTCAGCTTCAAACTTATGTGAAACATGATATTGTGACGGATAAACCAGCACAACCCCAGCTCTCANAAGATGCAAAAAACAACATTATGAGCCTGTTTGAAAAGTCTACCATAGCTTCTCCATACATGCACCAACAGCAGAGGGCAGCTTTTTTGGTTCAGCAACAGTCCTTGATGATGGCTGCCACAGCAGCATCTGGTGGTAGGCCAGCAGCTTCATTCCAGAGCCAAATGCTTGTTAAACATCATGGAACTATACCAGGTTA