| mature miRNA: TGTGGATATAGAAGGGTTAGT species: Picea sitchensis database: miRNEST The numbers on the right side of the alignments show a score calculated for them. When calculating the score, a mismatch is given a score of 1, bulge: 2, and wobble: 0.5. |
| Predicted miRNA targets | |||||||||
gi|149954836|gb|ES854865.1|ES854865 WS02763.CR_A20 SS-IL-A-FL-14 Picea sitchensis cDNA clone WS02763_A20 3', mRNA sequence TGTGGATATAGAAGGGTTAGT EST sequence (targeted fragment marked with yellow): AAGAGCTCTTTTTTTTTTTTTTTTGAATGAAATAGTGGACGGATGTATATATCATAGGGTGGTAACTATTGACAAAAAAATTCAAGTATCAATATGAAATTTAAAAGCTTAATCTAAACACTAAACACTTCACGAGTGTAAATTATAAAATGAATGAAATAGTGGAAGGATGTATATATCATAGGGTGGTAACTATTGACAAAGGTTGGTTCGTATACGAGAAAACGAGGGTTGCGTAACAGTCTCAGAGATTTTTGGGTTTCCTGGGTTGTGCTTATGCTAGTAGAGTCCAAAACGTCAACAAATACGATAATAAAGTTGCAGGCTTGAGCCCAGAAAATCGATCACTGATTTTACTGTGACTTCGAAGGTGGTCTTAAATTCTTCAAGTCAGGAGCAGGTAATATGCCCCATCTGTTCCGTACAAGTTCCAAGTCCTCATGAAAATGCTTTTCATAATATACCGACATTATATCTGTGCAGCTCATCCCAGCTCTGATAGCCCATGGAAAATAGTACTTAAAAAAGTATTCCCGTTGTTTTGCCTTCATTCTTACCGAACCACCTATTGTGGAAAGAAGGCACATTGGCAAATATAACTGCTGAAATTCCACAACTTTAAGAGCTGATTCCCCTATCATGTTTGTTGGGAGATTAAACAATACATGCCAAAAATCATGGATCTCCCTGGCTCGAGTCGCAACATACGCAAGCTCTTCTGTATCCATAAAACGAACAGGAGGGCGATCATCAGGAGAGAAGTTCCTAGAACCCATAAATTTGGCATAAGCTGCACCAAATGTATTTGCTGGTAGATCCCCTGCATGACCA | |||||||||
gi|138286556|gb|ES248077.1|ES248077 WS0367.C21_K23 SS-B-N-21 Picea sitchensis cDNA clone WS0367_K23 3', mRNA sequence TGTGGATATAGAAGGGTTAGT EST sequence (targeted fragment marked with yellow): TTTTTTTTTTTTTTTTGCAGTAAAAATGGACGGGTTTTCTATTAAAGGAAAACAGCAATAAATTGACCACTGGGCCAAATACATTTTGCCTGGCTCTATCTGAGAATCCTAAAACGATATGTCGCAGGACCTCACTCCGGCCTAAAAACCCATGGGAGGGTTTCGGTTAAAGAAAAAAGACAATAAATTGAAATGCTTGTGACCCAAAATAAAAGCGAGATCATACCTGGAGGGTTTCTCGAATTGGGTGCAGAGAACAGAGGTCAGAAAACTCCCATCGGTTAAGCAAGAAGGATTCTAAAACATTTTTCAAAATTTCAAATCAGATCCAAAGGATTTGAGCATTTGAAATACTTTGAGAACATAAATAATATACCGAGTCTTTTACGGGACAGGAAACTTTTGAGCCTTGGTCCATAATTTTTTATTGCCGTCGAAGAAATTGATGTGAGCAAACTAGTACTGTTGTGGATAGCAGAAGGGCTGGTAAAGAAAAAACAGGCAACCCATTTAATGAGTATTGCCATTAAAATGCACTGCTCGAACACAGTCGCTTGATCTCGAACAGCCAACATCTTGCAATAAAATGCCTCTCATGGAATCTCTATTAGATGGGCTTCGTACTGTTTACTAACTAACCCTTCTATATCCACATCTGTACACTCTGAACGCATCAATTTCTTCATACTGCAAGAAAACAGCTCCCCATCCCTGCAAAATTTGCCATGGTGCCATCGATTGGTGATCAAAACGATAAGGCTCGGTTCATGAGGATAAGGGCAGAATGAGGGATATGATATCCTGAATAAACACCCGTTACCAACAATGCATCCATAAATCTACCATTTATGCATTCACACGGGATGGACA | |||||||||