| mature miRNA: TTGTCGCCTGGTCGTTGTGGG species: Picea sitchensis database: miRNEST The numbers on the right side of the alignments show a score calculated for them. When calculating the score, a mismatch is given a score of 1, bulge: 2, and wobble: 0.5. |
| Predicted miRNA targets | |||||||||
gi|166904015|gb|FD739801.1|FD739801 WS03948.C21_C18 SS-B-24 Picea sitchensis cDNA clone WS03948_C18 3', mRNA sequence TTGTCGCCTGGTCGTTGTGGG EST sequence (targeted fragment marked with yellow): TTTTTTTTTTTTTTTTGTATATATATATATTTTTTTATTTTGACCCAACAAAACATAGTGTTCAGAAAAAGTACCCAGTACTCAAACAAACGAGTGCAACCCAGGAATCGAAATATCTTCTCAGCTGAGAGTTCAAGATCATTTCTCATAGTAAAATTGATCCTGAACACAATCTAATAAGCCCAATGCTTCTATGGATCTATACTGTATTTTGCCTTTTTGGAATGAAATTTGTGCTCGTCTTCCTTTGCGTAAATGATATTCTCGATCCTCTATTTCCGATTTCCGTTTCATATACTTCTACTTGGCGCGCAATATGACGTTGATAACCGCTATCTTGATCATTCTGATCATTACCATTCCTGCCCTCTGACTTCTGTCTCCAGTTGTAGATGAACGGCTCAGAGTCTTCGAGATTGTAATTCTAAAGATGTGGAGAACAGGCTTAGAGGGGTTCCAATTCTCAACCTGACGTTGCTCGTTAGCGTGCCGTTGTTTAAGTCCGCAATGTCGCCTGGCCGTTGTAAGAGCTTGATGACCATTACTAGAAAACTTCACTTTTCTAGTAACGATCATCAACCCCCCACAACGACCAGGCGACAATGAGGGCTGAAAGAAAGGCACGCCAGCAAGCAACGCAAGGCTGACAATTGCAGTAACCCATCGAAGCTGGTTCGCCATATCAAATGCGTGGCCGGGGAAGAAACAATTCAGATCACCCCTCGTGC | |||||||||