| mature miRNA: TGCACTGCCTCTTCCCTGGCT species: Pinus banksiana database: miRNEST The numbers on the right side of the alignments show a score calculated for them. When calculating the score, a mismatch is given a score of 1, bulge: 2, and wobble: 0.5. |
| Predicted miRNA targets | |||||||||
gi|292521598|gb|GW740416.1|GW740416 PBA0112.CR_J23 Pba01-Bark-wounded-Norm (PBA01) Pinus banksiana cDNA clone PBA0112_J23 3', mR TGCACTGCCTCTTCCCTGGCT EST sequence (targeted fragment marked with yellow): ATATCGAATTCCAAGCAACTCCCCTACTGTGATTTTGGCAGAAATGGAGCAGTCGAGAACATGGATTGCAATTGCTGTTGCAATGGCGATGATGGTTTTGCCATATAATTGTATGGCGACGAACTACACCGTTGGAGACACCCAGGGCTGGAATCTCGGCGTTACCTACACTACCTGGGTTAGTGGCAAGACATTCCATGTGGGCGACAATCTCATTTTCACATATACATCGACGAGCCACGATGTGCTGGAAGTCAGCGAGTCGGCGTATACTTCCTGCTCGACGAGCAACGCATTAAGCACATACAATGGAGGAGACAATACCATTCCGTTGAACAGCACAGGCGCGAGGTATTTCATATGTGGCATTACAGGTCACTGCTCCGGGGGTATGAAGGTCGGCATTAACGTTACGGCGGCTTCGTCTAACTCTACACAATCTCCTCCACCTCCGTCCACAAACAGCACCACAAACAGCACCAACAGCCCCAACAGCGCGGCCATGGCAGCTTCATACATGCAGATCAAGGACGGCGCCGTGCTCGTCGGCTCGCTTCTACTCGGATCTCTTGCTGTGTGGGTACTCTGATGCAGACGCTGAGATTGATGAGTGCCAGGGAAGAGACAGTGCCATATTTTTACAGCTATTGCGAATAATGGTTTGTTTGGTTATGGACTCGTCGCTATTTTTCTAATAAATTTGTCGCTTATCGTTATTTGCTGGGCTATGGACTCATCGCTATTTTTCTCTATTCGAGGCTAATAAAATTGTGCGGGCTTCGCTTTGAACCCATCGCTAATTTTCTACAAAAAAAAAAAAAAAA | |||||||||