miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse




mature miRNA: TGGCTCTGATACCAATTGTTG
species: Pinus banksiana
database: miRNEST
The numbers on the right side of the alignments show a score calculated for them.
When calculating the score, a mismatch is given a score of 1, bulge: 2, and wobble: 0.5.

Predicted miRNA targets
gi|292535805|gb|GW753408.1|GW753408 PBA0122.CR_K23 Pba01-Bark-wounded-Norm (PBA01) Pinus banksiana cDNA clone PBA0122_K23 3', mR 

TGGCTCTGATACCAATTGTTG
||| |||||||||| ||..||
ACCTAGACTATGGTAAATGAC

EST sequence (targeted fragment marked with yellow):
GCCAGTGGTGGGGGGACTAATACTGGAGGCACTTTAGGTGTTAATAGTGTCATAGGGAGTGATATGAAGAATTTGAATGGATTGGTCCCAAATGGTAATGGGTCTGCAAATCTTAAAGGTTCAAATGGCTTGGCTGGAAATTGTTTGACTAACAATGTAAGTGTTGACTTCAACAACATAGGGGCAATTGGCTCAATGCCTAGCTCAGTAAATGGTATCAGATCCAATAATATAGGCATGACCAATAATTCTGTGTCGTTAAATGGGAGAACCAATATACCTTCTGTACCTCAAAATCTTACAATGCAAGATCCCAATTTCAGTCTTCAACAGGAACTGGGAGGAAATAGATTGTTGAGTGGTCTTGGTGCTTCAGGCAGCTACAGTAACAATCAATTTGATTGGAAGTCCACTTAAGCAAGGCTATTAAGTTTCGATGGAAGCTTTCTTTGTAAAACAGAAGGTTGTGGGAGAAACCCATTAGCATTATGTCGAAATACATAATGTTTGCCACATGTACTATGCAGTATCTTAGTCAGCTTCAATAAATCTCCCATAGTGGGATTCAGCCATTTCATGATACTTGCCAAAGGATAAAGTTACTCGTTGCTTCTGTATTGCACCTTTTGTGGTTTAGGTTAATTCATTTAGGCCATCTTTTCACATCCCAGATGTAATATGCATTTATCCACTAACACCCCATTTAAGGGACCCCCCTTCCCTCTTTCTCCAGCTTCAGAATCTGAGAGCTGTATACAGGAATTCGTACTCCCACTGGCTAGTTTGTAACTATATGATTCACTAAATATGTGGGAGTGTGTGATGCACTTAAAAGCATCAGTTTTTGCAGAATGATAATTTACTTGGAAGTGAAATGGTTGTGCTTTCCAAAAAAAAAAAAAAAA


gi|292533968|gb|GW753082.1|GW753082 PBA0122.C21_M05 Pba01-Bark-wounded-Norm (PBA01) Pinus banksiana cDNA clone PBA0122_M05 5', m 

TGGCTCTGATACCAATTGTTG
|||||||.||||||||| ||.
ACCGAGATTATGGTTAA-AAT

EST sequence (targeted fragment marked with yellow):
GGGGGCTCTTGACAGGAGCCCCTGCGTAAAATTGGTATTAGAGCCAGTAACGTCTGGTTCTAATGTTGGTGCTCTAATCCAAAAGTACTCTTATTCAAAATGGAATCATTCAGGAAATCTGTTTCTTTACGAGAACTTGAAGAGAGAGACTCTCAAGCTGAACAAAATCCTTTATGAGATATGTTTGCTAGTAGTTCAAGTAGAACACTAAACTCTGTTGAACTTACATAAGAAGAAACTCAGCCTTCTGCCCATTGGGAATTGCCTCATATATCTCCTTCTGAAGTCTATAGTGATTTAGCGCCTTTTCATTTGATTGTTGCATCTAGGATAAGCATTAAAGAATCTGTCAGTCAAGTCCAAGAAAACTCTGACAATATCCAGATAATATCCCTATTGAATCCTAAAGTTTTACAAGCCAAAGCAAAGAAACTTAAGACAAATTATTTGCATCTAGGCTATATCAGGGTTGGAATCAATCCTTTAGTCCATAAAGGATTACATACTTTTGTGCTTTCAACAGTCAAAGATATGACGCACAATAAGTATGCATCATCATTGGTGGAATAGTGGCACCCTTATCTGATGGCCTTGTCTATTTTGATTGCTATCCAAACTTCTTTGTGTATGTATATGACGAGACCATTGCAGAAATCCTTCAGCTGCAAATCCAAACAACANGATTTGATATGAAGAAAAAGAGAAATAATATAGCCATCCAGACTAAGGCTTGTTTACGGCACACAAACACTTTATGGTCAGCTATCTGTCATACACCCAGTAGGGA


gi|292524102|gb|GW739061.1|GW739061 PBA0110.CR_J21 Pba01-Bark-wounded-Norm (PBA01) Pinus banksiana cDNA clone PBA0110_J21 3', mR 

TGGCTCTGATACCAATTGTTG
 .||||.|||||||||||||.
TTCGAGGCTATGGTTAACAAT

EST sequence (targeted fragment marked with yellow):
TATAGGCGGAGGACCCAATTGAGGTGAGGAGATCAACAAATGTGCTTTGTTTGTTACGCAGTCAAACTGTTAGGTCCCTATAATATTAGTGTATTCCCTTATTATTATTGTCATTGTACCCCTTATTGTTATTGTTGTGCCCATGTTGTCCCCATATTGTTATTATTTTTCCCCATAGAAGCCCACTATTGTTATTGTTGTGCCCTTACATTATCGTTGTTATGTCACTCAGATTATATTGTGACCCCTTAGACTCCTATATATAGAAATGAGTTCTTGTCATTTGTATCATCCAAGAATTATTCTTTTGTGTAATGTAATGGAGGTTGCCCCCTCGAAGAGGCTACGTCTTTAGTCGTTGATCTATCTATTTCTTCTATTTTGTGAGCTAGTTGCATAACAATTGGTATCGGAGCTTTGGATTCTAGGGTTTCGCTGCATCAAACAGGCTCCCAAATTGGATCACAAACATGTCATCTTAGGAAAATCGTCATAACTTTCTCTCTGAGCTTCTGATTCAAATTTCGTAAAAAGTGATAGAAAGTAGACAGACTGTAGTTTGTTGGGTATCGTTTTCAAAACCTAAGGTCAAAACAGTGACACGTGGCATGTCGTACAAGTTCCTTCTATTGAACTAGTCTATCATTAGGTCATTGCAGGAGATTGGACATAACCCTTTTTTCGGGAATCCAATTGCGGCCAGACTTGCGGGGTTGGAAAGAAGACTCAGAGGGTATCACAGGCCGAAATTTCAGAACTTGGAGATCCGAAATTACAGAGTTACAGGCTTTTCAATATCAAGCTCATACAAAGCAAAAAAAAAAAAAAAA


gi|292523394|gb|GW741740.1|GW741740 PBA015.C21_E20 Pba01-Bark-wounded-Norm (PBA01) Pinus banksiana cDNA clone PBA015_E20 5', mRN 

TGGCTCTGATACCAATTGTTG
 |||||||||||||| ||||.
TCCGAGACTATGGTTTACAAT

EST sequence (targeted fragment marked with yellow):
GGGGATATAAGCGAGCCCTTATTTGTAACCACAATGTCATATCTCATATCTCTTGCATTCAAACATTTATGTATAAATACTACTTGTCCTATATTGATACTTTGATATTTCAGATATTCTGAATATTCCTCTGCATATATGAACTTTGTTCGTAACATTTGGTATCAGAGCCTCGTTCTCTTGTCCCGGCCTTTGGCCATCAACTATCCGTCAACTTCATTGTCATTGCCATTTAAGCATTTCAACTTTCACTACACAAGTTTTGGAGTTTCTCCATTCAGCGGGTTTTGTCATTCAGGCCTTTGGCCATTTAAAAATAGAAAAGAAGAGAAGAGAAGTCAAAGATATTTATTAAATGAAAAAAAGGGTTAAAAAAAATAAAAGATTAAAAAGAAAAAAATTTTGAAACTGTCAGCTGCCATACATAGTAGCAACTGCTTTACAAATCGTTACTGCAACTATAGTCGGCGTTTTCCGCAGCATAGTTAGCCGCAGCCGACCAATGACCTGCCGACTGTTGAAAAGAAAAACCTGTGCCACCACGTTTTGTCATCACCACCAACCCAAACTGCTGTGAGGTTTTCTCACCGCTGCCGAGTTTTTCAGCTTGCCATCGCTGTTCCAACTTGAAGTTGTAGCTGCCTGTTGGAATATTAAATCACCAAAGTTGTCATTCAAGAACCAAAGGAATTGCTTGCTGTAGAAATTCATACATTGCTCACTTTAATTGCTTGCGGTTACCCTAGGTGAAAATGTTGCCACCACTATTGATAGTTCTGCAATTGACCGCATACATCATAGTTGTCTGTACGGAATATA


gi|292550459|gb|GW772093.1|GW772093 PBA0223.CR_E17 Pba02-Xylem-wounded-Norm (PBA02) Pinus banksiana cDNA clone PBA0223_E17 3', m 

TGGCTCTGATACCAATTGTTG
|||||||||||||||| | ||
ACCGAGACTATGGTTA-CTAC

EST sequence (targeted fragment marked with yellow):
GGGGGCAACTCAGCCTCAGACTTACCACTATGCCACAGAAAGTGTACCACAGAAAACTTGTCCAGAACTTGGCCTCCTCTGATTACTAGAGTGAGGGCAGATAGTTTGAATTCCTTCCTTCTGTTTTTGGCCTTGTACTCCTTGTCTTCTTCGCTTAGAACATAGATATATGTGATGATCTGAAGTGCACTCTTGGAGGAGATTGAATGGGCGACTTATAGCCTTCAAATGATGCAAATGGGTGTCTCTTCGGGCAGGCCGACTGTAACGGATAAAATATATAGATAATATAAATATAATGTAAAAGATAATAATCATAAATAATAGTTAGTTAAGCCAGTAATTAGGTTGAAGAGGCATGTCTAATAGGACATGACTCTTCATGAAAAGACACTTGCTTGGTATATAAGCAAGCTTCTCGTTTTCATTGTAATTCATTCACTCATTATTATTCACATATTTAATATATTATTTATATCCTTAGTGGATAATTTCATATTCCAAGTCTTTTGGAGTAATTAATCTTTAGAAGGAACTTTGTTCACTTCATTGGTATCATCATTGGTATCAGAGCCACGTTTGGCTGATCATCTGGCTGATCATCAGGCCTTTGGCTATCAACCTATCATCAACTTTGTTGCTGTCATAATTGAATTGAAGCGTTTCTCCGCATATTGGGAGATTCTCCATTTTTTAGGTCTTTGGCCATTTGGTTAATTAAAAAACAAAAAAAAAAAAAAAA


gi|292530460|gb|GW744186.1|GW744186 PBA018.CR_F18 Pba01-Bark-wounded-Norm (PBA01) Pinus banksiana cDNA clone PBA018_F18 3', mRNA 

TGGCTCTGATACCAATTGTTG
||||||||||||||| ||  .
ACCGAGACTATGGTTTACCTT

EST sequence (targeted fragment marked with yellow):
GATTTTGATGTTTCCTTATAAGAAGAAGAAGACCACCTTTCAGGACATGACAATAAAGTCAGAAACCAACAATGCCTTCATCAGAAGACTTTAAGGATATTTCAAAATAATAAAAAACTATACCAAAGAAGCAGAAAGAGCTTGAAGAAGTCATTTCCAATAAATACAAAGAAATTTCGCGCCTTAGAGATCACAATGAAAAACTACTCGAACAAGTCAAGAAAGCCAAGGTCACATATAAGGAACTCAAGAAGCACTTATCAGAACAAGAAGAATAAAATTTACGTTTAAAGAACCTTAATCAAGTTGTTATGAATAAAATATATTAAATATAAATATTGATGATAATTGTAATAATGATTAGTTAATTAGTAATTAGTGTTGAAGAGGCATGTCTAAATGGGACATGAATTTCCATGAAGAGACACCTGCCTAGTATACAAGCAGACCTCTCACTCTCATTTGTAACATCATTCTTATTCATACATTTTAATATATATTTTTGTATCCTCAATGGAGATCTACATATTCCAAGTCTTATGGAGTATTTAACTTGAAGAACAAACTTTGTTCATTCCATTTGGTATCAGAGCCATGTTGGCTAATCTCAGCCTTTGGTCATCAACTCATCATCAACTTGATTGTCTTCATAATCGAAGCGTTTCACTATATAGTGGGAGATTCTCCATTTATCACAAAGCTTTTGGCCATTTAAAAAAAAAAATTATAGAAAAAGAAAAAAAAAAAAAAAA


gi|292556835|gb|GW771150.1|GW771150 PBA0222.C21_K07 Pba02-Xylem-wounded-Norm (PBA02) Pinus banksiana cDNA clone PBA0222_K07 5', 

TGGCTCTGATACCAATTGTTG
|.|||||||||||||||||||
ATCGAGACTATGGTTAACAAC

EST sequence (targeted fragment marked with yellow):
GGGGACCCCCCTTCTCAATATTTCCAACAATTGGTATCAGAGCTAGTACCTTCACGCAAAGCCTAACAGCTTGAAGGTTGATCTTTAGAACACAAATGGCAAAGCCAAGGAGAAAGTCTCCAATCCTCCTAAAGGTGTGTCTCCCTCTACCACTGAAATAGAAGAAAGTCAATTTGAGAAGGCTCCATGGTTCAATGGAAACTTTGATGTGTGGGAAGCAAGAATGAGGAATTTCTTAAAGACTGAAGGCATTGAAATCTGGAAATCAGTAAGTGTTGATAGCATGATGGATGGAGAATCCAAGGAGTACAATGAAAAAGCAATGAAGGCAATCTTGAATGGGCTACTTGATTCTATAAAGAACAATTTAGGAAAATATTCATCAGCAAAGGGTATATGGGACAAACTTCATGACCTTCACTCAAAAGGAGCATTGACCATGACCATCAGTCAAGAAGAAGATGGAAATCAAGAAGGAAATCCAGAACCCATCACAGAAGCTGAAAATGAGAATGATGATATCAAGGCTAAAGAAGATCTAAAAGATGAAGAGAATGAAAAAGATTTTGTAGAAGATCTCGATCAACTTATGGCTGCCATGGAAGAGATTATCAATTTGAAAAAGGAAAACGAGGAACTTAAGAAGAAAGCACTAGTTGGTGACCAAGACCAAACAAGGAAGAAAGTTGACCTTATCAGGCTGCAAGTACAAGAAAGGGATGAAGAGCTTGCCAAGCTGAAGAAGGAATTTCATCAAAGCAAAAGAAAGCAGCATGAAGAAGTCATATCCATGACAAATTAATTGGATAAAGCAAAGAAACGGGA


gi|292542786|gb|GW765763.1|GW765763 PBA0214.CR_J22 Pba02-Xylem-wounded-Norm (PBA02) Pinus banksiana cDNA clone PBA0214_J22 3', m 

TGGCTCTGATACCAATTGTTG
 .||||||||||||| ||||.
TTCGAGACTATGGTTTACAAT

EST sequence (targeted fragment marked with yellow):
ACCGGATGATCTTTAGATCAATCCTACACCTCTCAATGAGAGGGATCCAATAAAAATATCAGCTGCCATAAATAAGCTGATCCACATGGAGTTTGGCCCTAGTTGCCAATTTAACATCATTTATGTAATGTAAAGGAAGTTTCCCCCTCGAAGTGGATAATGTTTAAGTCGTTGATCTATCTATTTGTGAGCTGGTTGCATAACATTTGGTATCAGAGCTTTGAATTCTAAGGTTTCACTGCTTCAAACATGTCATCGTGGAATTTTCGCTATAACTTTTTTTTTACGAAGCTTTAGATGTTGAAATTGCAACCATAGGGAGCCAAAATCTTGGTGAACTTCATGTATGAATTTCAGATATTGTCTCGCTATATTTTCGGAGATATGATTTGTGGAAGTTAGGGTTATTGCAGGCTCTATAATTCCATCTCAAACAAACGACCTAGGGAAAATCGTCATAATTTTCTCTCTGAGCATTGTATTTGAATTTCGTAAAAGTGACAAATAGGACAAAATGTAGTTGTTTGGGTATCATTTTCAGGGATGAAGGTCAAAACAGTGATAGGTGGCACGTCGTACAATTTCACTCTACTGAGCCAATCTATAATCAGGTCATCGTGGGAGATTGGGCATAACTATTTATTGAAGAATCCAATCTTGGTCTGATTTGTTGGGTTGGAAAGAAGTCTCAAAGGGTTACTAGAAGACGAAATTTTAGATCTTAGAGATTCACAATTACAGAGATACAAAATTTGCAATATATAGCTCCTAAAAAAAAAAAAAAAA


gi|292544342|gb|GW760551.1|GW760551 PBA021.CR_G09 Pba02-Xylem-wounded-Norm (PBA02) Pinus banksiana cDNA clone PBA021_G09 3', mRN 

TGGCTCTGATACCAATTGTTG
|||||||.||| |||||| ||
ACCGAGATTATTGTTAACTAC

EST sequence (targeted fragment marked with yellow):
GGGGGAGCCTACAAAAAATCAAATGTAATAAGGGAGTCGGAGCTTGCCTTTGCATCACAACAATAACAAGCTATGTTTTTCTCCCGTTATGGGTTTCCACTTATATTTGGTGTCTATATGTGTTAGTATTATGTGATGATGTGATGCTTCGGCTTACTTATTACTTGTTGTTCACATATAATTTTTTTTTGGTCATTATGTGTTAATTTGCTCATTTAAAAGTTCAGTTAATGGGTTTAAAGAAAATCAAATCAATGTCCATGAATGAACTAAACTAATACACCTCCCCTCTCAGTTTAGTCAAGTTTCCATCAATTGTTATTAGAGCCAGGTTCCTTCTGTGTAAGCCTAACAACTTGAAGGTAGATCTGGTGAAGTCATGGACTATCAAAGTGTACCTGTACTAAGTGCAACAAACTTTCATGAATGGAGAGATAAGGTAAAATCTGAGCTTATATCTTATGGACCTAGTGTATGGAAGCTAGTATGTGATGTTTACTGCAAATATTCCCTTTCTAAGCAAGAACAACAATGGAAAGCTCAGGCAAAATGCATAATGTATAATAATCTTCACAATAAGAATCTTGAGACAACGATAGATTTAAATTCTACAAAAGAAATTTGGGAAAGGTTACCACTCATGCATGAAGGAGACACTAGTAACAACACTGTCGAAAAGGAGAACAAAAAAAAAAAAAAAA


gi|292555088|gb|GW773604.1|GW773604 PBA0225.CR_I20 Pba02-Xylem-wounded-Norm (PBA02) Pinus banksiana cDNA clone PBA0225_I20 3', m 

TGGCTCTGATACCAATTGTTG
||||| ||||| ||| ||||.
ACCGAAACTATAGTTTACAAT

EST sequence (targeted fragment marked with yellow):
GGGGGCGCTTCTACAACCCTGCCACGTTCTTTGGGGTTCATGTGACTTCCACACCCATGGATCTGATGTACTATCAACTTGTAGTTGCCTCGGGCCAGGTACAGAAGTTTTATCAGTCCAGGAGAACCCATCGCACTATAGATGTAGTGTTACAGGGCAAGAAAGTGCCTCTCTACGGAGGTGGTGCTAGCTTGACTAGCGCTGATGCAGTGGGTGGCATTCCTTTAGACTTAACATTTGATATCAAAGCCAAGGCTTATGTCTTGGGTAAGCTTGTTAAAACAAAATTCAGGAAGCGTGTTTACTGCAAAATTGATTTGGACTCAGCGACCCTCATGAAATCCAGATCACTGAAGAAGTCTTGCAAGTATGATTAGTGCAGAAGAATACAATGTCGCAGGCTCAGGTTTAGAAAAGTTATACTAATGCGATTATTTTGTTTTACTCAGTGTAAAGATTTTTAGTTTGAAGGCTAATGGACTTAGTTGCCGTTGCCCCTTCATCGGGTCTGACCAAGTAGTTTGCTTATGAAATGACTTCTAGTCAACATTTGATTGTAAATGTAAAGATGCCTCTGTATTCAATTGAGAGAACGCTAGAAGAAGAGATCGATGATGGTTATTTTTCGGGTAGTAGACAATGAACTTAGTTTCAAGCCATTAGGGATAATAGGCATTCCTTATGACGGGAACGCTAGAGTCTAAATAAAGCTTGAACTTTAGGTTCACAGCTGATGAATGTATGGTTGATGGAAGACAAATTAAATTAATTATTTAATTCCTTGTATTTTGCTCCAAAAAAAAAAAAAAAA


gi|292549855|gb|GW774086.1|GW774086 PBA0226.C21_O02 Pba02-Xylem-wounded-Norm (PBA02) Pinus banksiana cDNA clone PBA0226_O02 5', 

TGGCTCTGATACCAATTGTTG
.||||||||||||| |||||.
GCCGAGACTATGGTCAACAAT

EST sequence (targeted fragment marked with yellow):
GGGGGAATAGATGTGTATTCTGTGTGAGCGAGAAATAGAGAGGTGAGACTGTGAGAGAAGACAGAGGATATTACAGCGGATTTGCTGTAGGTTGTGTCTCTTCATTTTGCTGGATAATAGAAAGGAAGGACTGGGTGTTCGAGGTGGACGTAGCCCAAACTGGGTGAACCACGTATATCTGTGTCTCTCTTGTTTTGTGCGCTTTCTGTGTTTATATTTCTGCAATATTTGATGTGTTCCATTGCTCTGTAAGATATAATTTTCTAACAACTGGTATCAGAGCCGAAGGTCTATTTGGCTGATAAACTCGCAAGAAAGAAGGGTTCCTAGTTCGAGTGGGAGCAGTGGCGGAAGATGGTAAGTTTAGGGTCGAGAAATTTAACGGC


gi|292542629|gb|GW759637.1|GW759637 PBA028.CR_M13 Pba02-Xylem-wounded-Norm (PBA02) Pinus banksiana cDNA clone PBA028_M13 3', mRN 

TGGCTCTGATACCAATTGTTG
|||||||||||||| |||| .
ACCGAGACTATGGT-AACATT

EST sequence (targeted fragment marked with yellow):
TAGCAGTTTTTGAGCACTTGCGGAGTTTCAGAATTGGGGGAGCATTTGAGCTGGGATCTGCTTAGTGATTGAGGGGAGAAATTTGCAGGAGTTAGGGAGGATTTCTTGGAGGGAGTTTTGGGCCAATTCAACAATATCTAAATTGTAGGGCGTTTTTTGGCCAAATTGAGCAATTTCCACTTGTTGAAGGTCACTAGGGGTCGGTGGATTTAGCCCAAACCCTTTCTGGGTTTTTGTGGGTTTGGTGAGAGGAGACTAGTATTTATTTTAAAGAATTTTCAGAGCACTTCTGAGGGCAGAATTCCTAGTTCCATTTAGCAGTTAGCAACATAAACTGTTGGAGGAGGAGGGCGCAATTTACCCCAGGACTGTTTCCACCACTTCGGTCCGTGAGATATTTCTAGGTTTTTTTGGAGCTGGTGTGGAGAGCCTACATTTAATTTTGCAGCATTTTTGGAGTAGATTTGAGGGCCAAAATCTCAGTTCACCTATAGCAGCAGCGGCAATAATTTTTTGGGCTAGCGCAAAATCATGGTGGGGAGCTCATCTGACATTTGGGCAGCTTGATCATCACTTGGGTTTGGATTTACTTGCTGTAGCAAGCCCAGGTTCCTCTTTCATACTCATTTGTACTCTATTTGCTCGGAAATAAATAAAATGGGTCAGAGTTTTGGTGCATTTCCTCGTGTTGTGATTTCCTGTATATGTGTTTAATTTCCTAGTTGTTGTCACAGTGCATGTTTCTGTTATTCACTTAATATTTCCGTAAGGAATATTACAATGGTATCAGAGCCATAATCTTGGCTCAGCCTATGGGAAACCCTTCATTCTATGACAAAAAAAAAAAAAAAA


gi|292544232|gb|GW763814.1|GW763814 PBA027.C21_C04 Pba02-Xylem-wounded-Norm (PBA02) Pinus banksiana cDNA clone PBA027_C04 5', mR 

TGGCTCTGATACCAATTGTTG
 .||||||||||||| ||||.
TTCGAGACTATGGTTTACAAT

EST sequence (targeted fragment marked with yellow):
GGGGATTGTGCCCTTGCATTATTATTGTTATGTAGGCTCTGATTATGTTATGGTCCCTTAGACTCCTATATATAGAGAGGAGGTCTTTTCATTTGAATCATCCAAGAATTGTTCATTTATGTAATGTAAAGGAGGTTGCCCCCTCGAAGAGGCTGAATTCTAAGTCGTTGATCTATCTTTTCTATCTTCTCTTGAGCTGGTTTCATAACATTTGGTATCAGAGCTTTGGATTCTAGGGTTTCGCTGCTCCAAACAGGTCATCGTGGAAGTTTCGCTATAACTTTTTTTCTGTGACGTTTCAGAAGTCGCAAAAAAAACCCATTTGAGAAGAATTGACGCTGAATTTTGGGACCGAATTTCAGAGCTTTTCGCTCGATATTTTCGGAGATATGAGCTGAGGAAGTTGGCATTTTTGCAGACTCCTGAACTACACTAAAAATAGGTGACCTGGGGAAAATCGTTATAACTTTCTTTCTGAGCATCGAATTGAAATTTCGTAAGAAGTTACAGAAAGAGGACGGACTTTAGTTTTCATTTATATATCTTTTAGAGTCAAAGGTTGAAACAGTGACACGTGGCACTTCATACAAGTTCGCTCTACTGAACTAGTCTATAATCAGGTCACCGTGGGAGATTTGGCATAACTCTTCATTGGAGAATCCAATTGGGGTCAGACTAGTGGCATTGGAAAGAGGACATAGAGGACTACTAGAGGTCATAGTTTCAGAGCTTAAATATCTTAAATTACATAGTTACAGGCATTTCAAG


gi|292539546|gb|GW756663.1|GW756663 PBA021.C21_N13 Pba02-Xylem-wounded-Norm (PBA02) Pinus banksiana cDNA clone PBA021_N13 5', mR 

TGGCTCTGATACCAATTGTTG
 .||||||||||||| ||||.
TTCGAGACTATGGTTTACAAT

EST sequence (targeted fragment marked with yellow):
GGGGAAGGAGGTTTTGTCATTTGAATCATCCAAGAATTGTTCATTTATGTAATGTAAAGGAGGTTGCCCCCTCGAAGAGGCTGAATTCTAAGGCGTTGATCTATCTTTTCTATCTTTTCTTGAGCTGGTTTCCTAACATTTGGTATCAGAGCTTTGGATTCTAGGGTTTCGCTGCTCCAAACAAGTCATCGTGGCATTTTCGCTATAACTTTTTTTCTGTGACGTTTCAAAAGTCGCAAAAAAAACCCATTTGAGAAGACTTGGCGCTGAACTTTGGGTCCGAATTTCAGAGCGTTTCGCGGGACATTTTCGGAGATATGATCTGAGGAAGTTGTCCTTTTTGCAGACTCCTGAATTACACTCAAAACAGGTGACCTGGGGAAAATCGTCATAACTTTCTTTCTGAGAATCGGATTGAAATTTCGTAAGAAGGTACAGAAAGAGGACGGACTGTAGTTTTCATTTATATATTTTTCAGAGTCAAAGGTTGAAACAGCGACACGTGGCACGTCGTACAAGTTCGCTCTACTGAATTAGTCTATAATCAGGTCACTGTGGGAGAATTGGCATAAATCTTTATTGGAGAATCCAATTGGGGTCAGACTGGTGGCATTGGAAAGAGGACACAGAGGACTACTACAGGTCGTAGTTTCAGAGCTTAAAGATCTGAAAGTACAAAGTTACAGTCATTTCAAGATTGAGCTCCTAAAATCA


gi|292551314|gb|GW769588.1|GW769588 PBA0220.C21_E22 Pba02-Xylem-wounded-Norm (PBA02) Pinus banksiana cDNA clone PBA0220_E22 5', 

TGGCTCTGATACCAATTGTTG
 .||||||||||||| ||||.
TTCGAGACTATGGTTTACAAT

EST sequence (targeted fragment marked with yellow):
GGGGGTTAGAAGAAGCAGAATGCTGCCACCAAAAACTCCTTAAGCTTGGTGAGATAAACCAGTGGGAGACTTGGAAAGAATCTGTAAGGGTATGTGACTTGAAGCTGGACTGTTGATCTTGGTGCTTCAAGATACCCAAGTTGGATATAGATTCCATAATTATTGTCTGGATGGGAAGAGCTCGGGGGAGGGTTTGGATGTCATTTCCAGACTATAGGCTAGGTGTGGAAATCTTCTAAGAAGTTGAATTTGTTCAACCACAGGAAACATACAAGTATAATTGATTATAAAGTTTATGTTAGGCCCCTATACTACTAGTGTAACCCCTTATTATTATTAGTACAACCCCCTTATTATATTGTTGTACCAATGTAGTCCCCATATTGTTACTATTGTGCCCAATAGAAGCCCACTATTGTTATTATTGTACCCTTACATTATTATTATTATGTCAGCTCTGATTATATTATGACCCCTTAGACTCATATATATAGAAAGGAGGTCTTGTCATTTGTATCATCCAAGAATTGTTCATTTGTGTAATGTAAAGGAAGTTGTCCCCTCAAAGAGGCTTATTTCTAAGGCGTTCATCTATCTTTTCTATCTTTTTGTGAGCTCATTTCATAACATTTGGTATCAGAGCTTTGTATTCTAGTGCTTCGCTGCTCCAAACATGTCATCGTGGCATTTTTGCTACAACGTTTTTTATG