| mature miRNA: TAGCCTGGAACGAAGCACGCT species: Pinus contorta database: miRNEST The numbers on the right side of the alignments show a score calculated for them. When calculating the score, a mismatch is given a score of 1, bulge: 2, and wobble: 0.5. |
| Predicted miRNA targets | |||||||||
gi|262120986|gb|GT236739.1|GT236739 PCO0134.CR_G10 Pco01-Bark-Wounded-Norm (PCO01) Pinus contorta cDNA clone PCO0134_G10 3', mRN TAGCCTGGAACGAAGCACGCT EST sequence (targeted fragment marked with yellow): TTTTTTTTTTTTTTTTTAGAAAACAACTCTGCTTTTTTTTTTCCTTTCAACCATGGTCTCAAAGATGGATTCTATCTCAAAGATAGATTCTATCGAAGATTAGATTCTATGAATTCTAAACTTCAACAGATTTCAAACATTACTTAAGAAAATCCAAATTCTTTATCTAAAAGAATAACTCTGCTTCCTCTTTTTCTTTCCACCATTGTCTCAAAGATAGATTCTATCGAAGATGGATTCTAAACTTCAACAGCTTTCAAACATTACTACAGAAAATCCGAATTCTTTATCTAAAAGAATCGCACTTTTAAGACATTGCAACGCTGCATCCTAAACCTTGTTGACGCTACTGATAACGGAAAAGAACTGAAATAAAGGATACAAGTGCAATGAACTTTCATGCACGAAGTCTTCTATGTATTTTGTTCACGGCACCCCAAACAAAATACTGATAACGGAAAAGAACTGAAATAAAGGATACAAGTGCAATGAACTTTCATGCACGAAGTCTTCTATGTATTTTGTTCATGGCACCCCAAACAAATTCTAAAGAAATGAGAAAGGAGATTTTTCCTGTAAATACCTGGTTATATCATCGCTAAAATGGAAGAAAGAGAGAGAGAATCTGATTGACAGTTAGAGATTCATGAGCCTGAACCGAAACACGCTGTCTTTTCCCCATGGACAATAATACAAGTGCAAAACAGATGAAGATCCACCAGCAGATCGAAAGCGAGAAAGGTTATTAACAAAGTATGGAATTCAAAGATAGCGTGCTTCGTTCCAGGCTATGAATTTCCAGGCGCCACACGCTTGGGGGAATCGAAACCAGGGCGATGCGATCCCC | |||||||||