| mature miRNA: AGGTATGTACTTTTCTAGATC species: Pinus pinaster database: miRNEST The numbers on the right side of the alignments show a score calculated for them. When calculating the score, a mismatch is given a score of 1, bulge: 2, and wobble: 0.5. |
| Predicted miRNA targets | |||||||||
gi|90046850|gb|CT579548.1|CT579548 CT579548 LG0ACA Pinus pinaster cDNA, mRNA sequence AGGTATGTACTTTTCTAGATC EST sequence (targeted fragment marked with yellow): AATTCGGCACGAGGCTCTTCTTTGTTCTAGTTGGTGTTTCTAGTCATGGCGAGCAGGAGAGCTGTTATATCTGCATTTCGAGCTGCGAGTAGAAGGCCAATCTGCTCCCCAGTCTCTTCTATCGCATCGTCTGTCAGAGAATTGCATGCACCTGCAGGAAGTAATAAAATTGTTGGAGTCTTTTATAAAGCCAATGAATATGCTTCACTGAATCCTAACTTTCTTGGGTGTGTTGAGAATGCTTTGGGCATACGAGAATGGCTGGAATCTAATGGTCACCAGTACATTGTGACAGATGACAAGGAAGGTCCTGACTGTGAACTTGAAAAGCACATACCTGATGTGCATGTTTTGATTTCTACGCCTTTCCACCCGGCCTATGTGACAGCAGAGAGGATCAAGAAGGCAAAGAACTTAAAGCTTCTTTTGACAGCTGGTATTGGTTCTGATCACATTGATCTAAATGCTGCAGCAGCCGCTGGTGTGACTGTTGCAGAAGTTACAGGAAGTAATGTGGTGTCCGTGGCAGAAGATGAGCTAATGCGCATTCTCATATTGATGCGAAACTTTGTGCCTGGATATAAGCAAATTGTCGAGGGTGATTGGAAAGTGGCAGCAATTTCTTACAGGTCATATGATCTAGAAGGGAAAACTATTGGTACTATTGGTGCANGGCGTATTGGCA | |||||||||
gi|47033727|gb|CR393164.1|CR393164 CR393164 RN Pinus pinaster cDNA clone RN53D07, mRNA sequence AGGTATGTACTTTTCTAGATC EST sequence (targeted fragment marked with yellow): CTCCAGGCGACGCTAAGGTCGGAGAGAAAATCTTCAAGACGAAATGCGCGCAATGCCATACGGTTGACAAGGGTGCAGGACACAAACAAGGGCCAAATCTGCATGGGCTCTTTGGCAGGCAATCTGGCACAACTGCAGGATATTCTTATTCTGCAGGCAACAAAAACAAGGCTGTCATTTGGGGCGAGGATACTCTGTATGAATATCTTTTGAATCCAAAAAAGTACATACCTGGAACCAAGATGGTATTTCCTGGTCTGAAGAAGCCTCAAGAACGGGCGGATCTAATTGCGTATCTCAAGCAATCCACATCGTCAGGGTAGTTTAGAGGAGAATTATCCTCAGAGATAATTGTTGGCCGGCTAGATTAGAATATCCTAGCTAAAATTTTTATTTGCGAGGATAGAATTTCAAGACGACACATCACCACATTATTAACAATTTTTTAATAAAGACGAGACAGATAATGCCTAGGACGAGGCAAAATTTTTCCCATCCAAGGTTTAAAATCTGAAAC | |||||||||