| mature miRNA: GGAATGTTGTCTGGCTCGACT species: Pinus taeda database: miRNEST The numbers on the right side of the alignments show a score calculated for them. When calculating the score, a mismatch is given a score of 1, bulge: 2, and wobble: 0.5. |
| Predicted miRNA targets | |||||||||
gi|51497880|gb|CV035045.1|CV035045 RTNACL1_13_F07.b1_A029 Roots plus added NaCl Pinus taeda cDNA clone RTNACL1_13_F07_A029 3', m GGAATGTTGTCTGGCTCGACT EST sequence (targeted fragment marked with yellow): AGGATTGATATCATCCTCTCGCCAACTGGCTCAATCACGCCCCCCTCCTGTGCGCACCCACTATGTTGGAACCTCTCCACCACCGTTGTCACCGCGTACCCATTCCGAGAAGGAGAAGAGACACCACTCGAGGAGGAAATCAGGGAAGGAGTTCGTGATTGTCACGGAGAAGAAGCCCTCGTCCCGGCCCGCGCCTCTACCTCGAAAAAGTACCCCTCAGTACACGACGAAAGTCGGGCCTGGCTGGAGCAGCAGTGGGAGGAGTTCCAGTCGACACAGGGAACGGGAACGAGAACGCGAACGTGATGAAGATCACAGCGGGCGAGACAGTGGAGAGTCATTCCCACAATACTGCATGACCTGTGAAAAGCAATTCCTGCCTGCCAACAACACCTACCTATATTGTTCAGAGGCATGCCGTCTTCATGATCAAGTACCCCCACAGCCCTTACGAGCAAATTCTTACTCCTCGTACCCCGCTTCCTATACGCCGTCCTCTCCACCACTTACGCCCTACACAAGACAGTACACCTCGTGGTCAGCAGCCGCGACCCCCTCGCACGAAGAAGGGCCAGACATCATTCCTCGCTTCTCGCCCACACAATCGCGACCACGATCCTACTTCAACTCAGACCCATACCCCCAGACCTACCAAGCCCCAGCTTATTCTGCCTCGCCCCCACAAGCGTACGACTCCGGATCCAGCACCGCGTTGGCATCACTGCGTGAGCTCGCGACTGCATTGCCACGAACAACCTCAAACCGACGCGAGCCGGAATCCCCTCCCAAGAGCAGTGCGAGCTCGATAAACCGAACTGGCAGC | |||||||||